RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC10 (Homo sapiens)

Ensembl gene IDs: ENSG00000124574

Ensembl transcript IDs: ENST00000244533.7, ENST00000372512.2, ENST00000372515.8, ENST00000372530.9, ENST00000437104.3, ENST00000443426.2, ENST00000463024.1, ENST00000502549.1, ENST00000505344.1

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATaGAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: CKWAPMPEKPTWRSR*KRARAEAWFWGSLR
Trigger: CCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR GCA 90 bp GCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATaGTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGGTGCC +
Preference number: 1 (lower is better)
Translates to: ARGPEQRPGSGEASG*CPPRSDFQRVIQGA
Trigger: GGCACCCTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR GCA 90 bp AGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTaGCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGGTGCCCTT +
Preference number: 1 (lower is better)
Translates to: RGPEQRPGSGEASGC*PPRSDFQRVIQGAL
Trigger: AAGGGCACCCTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGCCTTCTGGGGAAGTGTaGAGAGGTAGAGCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEPSGEV*RGRAPE
Trigger: CTCTGGGGCTCTACCTCTCCACACTTCCCCAGAAGG...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR-3UTR CCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAGCAGAGGCCTGGTTCTaGGGAAGCCTCAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAAEAWF*GSLRML
Trigger: CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGC...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR-3UTR GCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAGGGGAAGCCTCAGGATaGTGCCCACCAAGGAGTGAT +
Preference number: 2 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAGEASG*CPPRSD
Trigger: ATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR-3UTR TCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACTGCCCACCAAGGAGTaGTTTCCAAAGAGTAATCCA +
Preference number: 2 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARLPTKE*FPKSNP
Trigger: TGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR-3UTR GCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGAAGAGTAATCCAGGGTaGCCTTTTCCCTTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEKSNPG*PFPFWG
Trigger: TCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTT...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR-3UTR CCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGATGTATAGGCCCGGCCTaGATCAGAGAGAGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRCIGPA*IRERGE
Trigger: TTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACA...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR-3UTR TCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCACTGCCCACCAAGGAGTaGTTTCCAAAGAGTAATCCA +
Preference number: 2 (lower is better)
Translates to: ENASGLLCQKNPPGVPDALPTKE*FPKSNP
Trigger: TGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAG...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR CCA 72 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTaGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: KCKWAPMPEKPT*RSRCKRARAEA
Trigger: GGCCTCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
3UTR GCA 72 bp GAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTaGCCACCAAGGAGTGATTTCCAAAGAGTAATCCAG +
Preference number: 3 (lower is better)
Translates to: EQRPGSGEASGC*PPRSDFQRVIQ
Trigger: CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCCGGGAGCGGCCACGCTaGGCTGCTGCCGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPRERPR*AAAAQL
Trigger: CAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCG...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGGCCCTCCACAGCCGTaGCCCCTCCTGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWGPPQP*PLLPVC
Trigger: GCACACTGGCAGGAGGGGGCACGGCTGTGGAGGGCC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAGGGTCAGCCAGCCGGTaGCCAGCTGCAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGGSASR*PAAVAG
Trigger: GCCAGCCACTGCAGCTGGGCACCGGCTGGCTGACCC...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTGCGGCCACGCTGCGCTaGTGCCGCACAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTAATLR*CRTAGP
Trigger: TGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGC...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR CCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCCCAGGCCAAAGCCCTTaGACAGCCCCCGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPPGQSP*TAPALP
Trigger: TGGCAGTGCGGGGGCTGTCCAAGGGCTTTGGCCTGG...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCAGGCGGCAAATGTCCTaGGGCTGCCGGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPRRQMS*GCRSSP
Trigger: TGGAGAGCTCCGGCAGCCTCAGGACATTTGCCGCCT...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGGAGGTCCAGCCCGGATaGGGCGCCCGGCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGEVQPG*GARPPS
Trigger: TGATGGAGGCCGGGCGCCTCATCCGGGCTGGACCTC...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGAGCCCCAGCAGGCCTaGCGCGTTGGCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWEPQQA*RVGQED
Trigger: ATCCTCCTGGCCAACGCGGCAGGCCTGCTGGGGCTC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCACACCTCTAGCCCTATaGGTCCTGGGCCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPTPLAL*VLGLPL
Trigger: CAGGGGCAGGCCCAGGACCCATAGGGCTAGAGGTGT...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGCGGGCCATGGGCCCTaGGAGAAGTGGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWAGHGP*EKWGQK
Trigger: CTTCTGCCCCCACTTCTCCCAGGGCCCATGGCCCGC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGACCCCGGGAGTGGCCATaGGGGGAATGTGCCAACACC +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGPREWP*GECANT
Trigger: GGTGTTGGCACATTCCCCTCATGGCCACTCCCGGGG...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCGCCACCTCAGGTTCTTaGTCCTCGGGCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELATSGS*SSGRRG
Trigger: GCCCCTCCTGCCCGAGGATCAAGAACCTGAGGTGGC...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGACAGTGGAGACAGGGTaGGGCTGCCCAGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGTVETG*GCPGAA
Trigger: TGCGGCGCCTGGGCAGCCTCACCCTGTCTCCACTGT...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTACAGTGGAGACAGGGTaGGGCTGCCCAGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTTVETG*GCPGAA
Trigger: TGCGGCGCCTGGGCAGCCTCACCCTGTCTCCACTGT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGCGGGCTCCCAGTGCCTaGTCCCACCCGCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRRAPSA*SHPQNL
Trigger: CAAGTTCTGCGGGTGGGAGCAGGCACTGGGAGCCCG...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGGGGTCAGCCAGCCGGTaGCCAGCTGCAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQGSASR*PAAVAG
Trigger: GCCAGCCACTGCAGCTGGGCACCGGCTGGCTGACCC...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGTGTAGGTGGCCCCTGTaGCCCGGAGCACAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRCRWPL*PGAQRG
Trigger: GCCTCTCTGTGCTCCGGGCCACAGGGGCCACCTACA...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCGCAGAGGCCTGGTTCTaGGGAAGCCTCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPAEAWF*GSLRML
Trigger: CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGC...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGAGGTCCAGCCCGGATaGGGCGCCCGGCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPEVQPG*GARPPS
Trigger: TGATGGAGGCCGGGCGCCTCATCCGGGCTGGACCTC...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCGTAGAAACGGATGTCTaGGGAGCCATTGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPVETDV*GAIGGS
Trigger: GCTGCCCCCAATGGCTCCTCAGACATCCGTTTCTAC...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGACCCCTCCTGCCAGTGTaGCTGGAAGACACGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGPLLPV*LEDTSQ
Trigger: CTGGCTCGTGTCTTCCAGGCACACTGGCAGGAGGGG...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAAGCCGTGCCCCCTCCTaGCAGTGTGCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGSRAPS*QCAWKT
Trigger: TGTCTTCCAGGCACACTGGCAGGAGGGGGCACGGCT...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGGGTGATGGCCAGTTaGAGGGGCAGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGRVMAS*RGRPQA
Trigger: AGCCTGGGGCCTGCCCCTGCAACTGGCCATCACCCT...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTGGGTTAGCGAGGCCCTaGTGGTGCTGCACCAGAGCG +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTGLARP*WCCTRA
Trigger: CGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAACCC...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGACTTGCCGGAGCCTGTaGGGCCCACGATGCCCAACT +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWTCRSL*GPRCPT
Trigger: AGTTGGGCATCGTGGGCCGCACAGGCTCCGGCAAGT...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCCTGCTCTGCAGCAGCTaGTGGAACAGGGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELLLCSS*WNREWG
Trigger: GCCCCACTCCCTGTTCCAGCAGCTGCTGCAGAGCAG...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGCCCTGCTGGCTGCTCTaGAGCAGCTGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWPCWLL*SSCWNR
Trigger: CCTGTTCCAGCAGCTGCTGCAGAGCAGCCAGCAGGG...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCCCAGCCACTGCATTGTaGCACTGGTGGCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPPATAL*HWWQTG
Trigger: GCCAGTTTGCCACCAGTGCCACAATGCAGTGGCTGG...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCAAGCCCACCAGCCCTaGGTTAGCGAGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTQAHQP*VSEALL
Trigger: CAGCAGGGCCTCGCTAACCCAGGGCTGGTGGGCTTG...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCCAGCTCCAGCTGGCTaGTGTCCACGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGPAPAG*CPRRPA
Trigger: TGCTGGACGGCGTGGACACCAGCCAGCTGGAGCTGG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGGCTGGTTGCGCAGGGTaGCCGGGGAGTCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGAGCAG*PGSPAL
Trigger: TAGAGCTGGACTCCCCGGCCACCCTGCGCAACCAGC...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGTGCTGGAACAGGGAGTaGGGCTGGTTGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLCWNRE*GWLRRV
Trigger: CACCCTGCGCAACCAGCCCCACTCCCTGTTCCAGCA...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGAGCAACAGGGGCCCTaGGAATCCCAACATGGTCCC +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCREQQGP*ESQHGP
Trigger: GGGACCATGTTGGGATTCTCAGGGCCCCTGTTGCTC...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGACAGCAGGTAGAGGGTaGTGGCCAGTTGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLTAGRG*WPVAGA
Trigger: TGCCCCTGCAACTGGCCATCACCCTCTACCTGCTGT...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCCAAGTAACAGGCACTaGGCACGGCGAGGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTPSNRH*ARRGAR
Trigger: ACGCGCTCCTCGCCGTGCTCAGTGCCTGTTACTTGG...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR GCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGCCATGAGGGGAATGTaGCAACACCCACAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRAMRGM*QHPQGQ
Trigger: CTGGCCCTGTGGGTGTTGGCACATTCCCCTCATGGC...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTGGCTTAGTGGCTCCTaGCCCTCTTCCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWWLSGS*PSSRKP
Trigger: GGGCTTCCTGGAAGAGGGGCAGGAGCCACTAAGCCA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCGCCGTTCAGAGTCAGTaGCTAGTAGGTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPAVQSQ*LVGSGP
Trigger: AGGCCCTGAACCTACTAGGCACTGACTCTGAACGGC...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGACAGCCCCCGCACTaGCACATGCCCACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPGQPPH*HMPTQP
Trigger: AGGCTGCGTGGGCATGTGGCAGTGCGGGGGCTGTCC...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCCAGCTGCTTGAAGGGTaGCTGCTGCAAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPQLLEG*LLQRAL
Trigger: CAGTGCTCTTTGCAGCAGGCACCCTTCAAGCAGCTG...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGCGAGGCCCTGCTGGTaGTGCACCAGAGCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPARPCW*CTRAMP
Trigger: AGGCATCGCTCTGGTGCAGCACCAGCAGGGCCTCGC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGGGTTAGCGAGGCCCTaGTGGTGCTGCACCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPGLARP*WCCTRA
Trigger: CGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAACCC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGCTGTGCGGCCCACGATaGCCAACTTCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWLCGPR*PTSLQA
Trigger: AGCCTGGAGAGAAGTTGGGCATCGTGGGCCGCACAG...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAACAACAGGGAAGACTTaGCGGAGCCTGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGTTGKT*RSLCGP
Trigger: TGGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTGT...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCCGTTTGCAGATGGTCTaGTGGAGCAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPRLQMV*WSSWSV
Trigger: GACAGACCAGCTGCTCCAGCAGACCATCTGCAAACG...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGGAGGCAGGGACTCCCTaGTGGCTGCTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQEAGTP*WLLCSS
Trigger: GCTGCTGCAGAGCAGCCAGCAGGGAGTCCCTGCCTC...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAAGCATAGGCGGGCCATaGGCCCTGGGAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARSIGGP*ALGEVG
Trigger: CCCCACTTCTCCCAGGGCCCATGGCCCGCCTATGCT...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGCATAGGCGGGCCATaGGCCCTGGGAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQSIGGP*ALGEVG
Trigger: CCCCACTTCTCCCAGGGCCCATGGCCCGCCTATGCT...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGGGAGCTCTCCAGCGATaGCAGCCAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGGALQR*QPAGSS
Trigger: AGAGCTCCCTGCTGGCTGCCATCGCTGGAGAGCTCC...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTGGAGCTCTCCAGCGATaGCAGCCAGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTGALQR*QPAGSS
Trigger: AGAGCTCCCTGCTGGCTGCCATCGCTGGAGAGCTCC...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCAGGTACTCAGTGCGGTaGGTGCAGAGCAGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELRYSVR*VQSSRV
Trigger: CACACGGCTGCTCTGCACCCACCGCACTGAGTACCT...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGTTAGCGAGGCCCTGCTaGTGCTGCACCAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRLARPC*CCTRAM
Trigger: CATCGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAA...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGGCATTCGGCAGCCCTaGCCGGTACGCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPGIRQP*PVRQHH
Trigger: GTGGTGTTGGCGTACCGGCCAGGGCTGCCGAATGCC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACCAGCTCCAGCTGGCTaGTGTCCACGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARPAPAG*CPRRPA
Trigger: TGCTGGACGGCGTGGACACCAGCCAGCTGGAGCTGG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGACGGCGAGGAGCGCGTaGGGCAGGGCGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKTARSA*GRALST
Trigger: GGTGCTCAGCGCCCTGCCCCACGCGCTCCTCGCCGT...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR TCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACAGCCAGCTGCAGGATaGGCAAGCATAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARQPAAG*ASIGGP
Trigger: TGGCCCGCCTATGCTTGCTCATCCTGCAGCTGGCTG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGAGAGTGGCAGCTGCTTaGAGGGTGCCTGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLRVAAA*RVPAAK
Trigger: CTTTGCAGCAGGCACCCTTCAAGCAGCTGCCACTCT...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGACCCGAACAGTCCCACTaGACAAAAAGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGPEQSH*TKRAPG
Trigger: CCCAGGAGCCCTTTTTGTTCAGTGGGACTGTTCGGG...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCCACCAGCACCCGGTCTaGGTTCAGGATCGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELHQHPV*VQDRVE
Trigger: CTCAACACGATCCTGAACTCAGACCGGGTGCTGGTG...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAGTGCCTCGCTGGCAATaGCACAACACGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGVPRWQ*HNTVST
Trigger: AGTGCTGACCGTGTTGTGGCATTGCCAGCGAGGCAC...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTGGCCCTCCACAGCCGTaGCCCCTCCTGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGGPPQP*PLLPVC
Trigger: GCACACTGGCAGGAGGGGGCACGGCTGTGGAGGGCC...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCCGGGCTCCCAGTGCCTaGTCCCACCCGCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPRAPSA*SHPQNL
Trigger: CAAGTTCTGCGGGTGGGAGCAGGCACTGGGAGCCCG...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGAGCATTCGCACCAGTaGCAGGGCCGTGAACACCTT +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCREHSHQ*QGREHL
Trigger: AAGGTGTTCACGGCCCTGGCACTGGTGCGAATGCTC...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTCAGCATGCCCAGGATaGACCTGTGCAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWSACPG*TCAAGG
Trigger: ACCACCTGCTGCACAGGTGCATCCTGGGCATGCTGA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGTTGAAGGGTGCCTGCTaGAAAGAGCACTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRLKGAC*KEHCPE
Trigger: CTCCGGGCAGTGCTCTTTGCAGCAGGCACCCTTCAA...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTTGAAGGGTGCCTaGTGCAAAGAGCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGCLKGA*CKEHCP
Trigger: CGGGCAGTGCTCTTTGCAGCAGGCACCCTTCAAGCA...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGATGCAGAGTGGCAGCTaGTTGAAGGGTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLMQSGS*LKGACC
Trigger: GCAGCAGGCACCCTTCAAGCAGCTGCCACTCTGCAT...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGCCATAAGGACTCGATaGAGCAGGCGGCGATGCAGA +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWAIRTR*SRRRCR
Trigger: TCTGCATCGCCGCCTGCTGCATCGAGTCCTTATGGC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGCGAGGCCCTGCTGGTaGTGCACCAGAGCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRARPCW*CTRAMP
Trigger: AGGCATCGCTCTGGTGCAGCACCAGCAGGGCCTCGC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCTGTGCGGCCCACGATaGCCAACTTCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGLCGPR*PTSLQA
Trigger: AGCCTGGAGAGAAGTTGGGCATCGTGGGCCGCACAG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAACTTGCCGGAGCCTGTaGGGCCCACGATGCCCAACT +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARTCRSL*GPRCPT
Trigger: AGTTGGGCATCGTGGGCCGCACAGGCTCCGGCAAGT...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCCCTGCTGGCTGCTCTaGAGCAGCTGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQPCWLL*SSCWNR
Trigger: CCTGTTCCAGCAGCTGCTGCAGAGCAGCCAGCAGGG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGAGGCAGGGACTCCCTaGTGGCTGCTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSREAGTP*WLLCSS
Trigger: GCTGCTGCAGAGCAGCCAGCAGGGAGTCCCTGCCTC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACCAGGCCAAAGCCCTTaGACAGCCCCCGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRPGQSP*TAPALP
Trigger: TGGCAGTGCGGGGGCTGTCCAAGGGCTTTGGCCTGG...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATCCAGGGTTCCTGGGTaGCCAGGCCAAAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPSRVPG*PGQSPW
Trigger: CCAAGGGCTTTGGCCTGGCCACCCAGGAACCCTGGA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATGGATCCAGGGTTCCTaGGTGGCCAGGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPWIQGS*VARPKP
Trigger: GGGCTTTGGCCTGGCCACCCAGGAACCCTGGATCCA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGCGGATGGTGGCAAACTaGATCCAGGGTTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRRMVAN*IQGSWV
Trigger: CACCCAGGAACCCTGGATCCAGTTTGCCACCATCCG...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCGGATGGTGGCAAACTaGATCCAGGGTTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLRMVAN*IQGSWV
Trigger: CACCCAGGAACCCTGGATCCAGTTTGCCACCATCCG...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTAGGTACTCAGTGCGGTaGGTGCAGAGCAGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTRYSVR*VQSSRV
Trigger: CACACGGCTGCTCTGCACCCACCGCACTGAGTACCT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAGCAGAGAGAAGAGGATaGCTAAGGCCAAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGAERRG*LRPSPG
Trigger: GCCAGGGCTTGGCCTTAGCCATCCTCTTCTCTCTGC...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCCATTGGGGGCAGCTTTaGGCAGTGGGAACACTGGGA +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELHWGQL*AVGTLG
Trigger: TCCCAGTGTTCCCACTGCCCAAAGCTGCCCCCAATG...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGTGTCTGAGGAGCCATTaGGGGCAGCTTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLCLRSH*GQLWAV
Trigger: CACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACA...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGGCGGCGATGCAGAGTaGCAGCTGCTTGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPGGDAE*QLLEGC
Trigger: GCACCCTTCAAGCAGCTGCCACTCTGCATCGCCGCC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGTGCCCAGCTGCAGTaGCTGGCCCTGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEGAQLQ*LALGFL
Trigger: CAGGAACCCCAGGGCCAGCCACTGCAGCTGGGCACC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCGGTCCACACTTGCTGTaGCCTCATCGATACACAGGA +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPGPHLL*PHRYTG
Trigger: TCCTGTGTATCGATGAGGCCACAGCAAGTGTGGACC...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGCTGGTTGCGCAGGGTaGCCGGGGAGTCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRAGCAG*PGSPAL
Trigger: TAGAGCTGGACTCCCCGGCCACCCTGCGCAACCAGC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATGCTGGAACAGGGAGTaGGGCTGGTTGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPCWNRE*GWLRRV
Trigger: CACCCTGCGCAACCAGCCCCACTCCCTGTTCCAGCA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGCCAGAGCAGAGGCCTaGTTCTGGGGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPARAEA*FWGSLR
Trigger: CCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTGAGGCACATCGTGGCTaGCTCAGGAGCCAGACATAC +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTEAHRG*LRSQTY
Trigger: GTATGTCTGGCTCCTGAGTCAGCCACGATGTGCCTC...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGGCATAGGAAAAGCGTaGCAGCCAACTCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWGIGKA*QPTLPI
Trigger: GATGGGGAGAGTTGGCTGTCACGCTTTTCCTATGCC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTTCTCAGCCTTCAGCTaGGAGATCCAGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWFSAFS*EIQWES
Trigger: GCTCTCCCACTGGATCTCTCAGCTGAAGGCTGAGAA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCGTGGGTGTGGCATTaGAGAAAGTCACTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLPWVWH*RKSLVP
Trigger: TGGCACCAGTGACTTTCTTCAATGCCACACCCACGG...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGCCGTGGGTGTGGCATTaGAGAAAGTCACTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWPWVWH*RKSLVP
Trigger: TGGCACCAGTGACTTTCTTCAATGCCACACCCACGG...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCACCAGCACCCGGTCTaGGTTCAGGATCGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTHQHPV*VQDRVE
Trigger: CTCAACACGATCCTGAACTCAGACCGGGTGCTGGTG...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGTCAGGGACCTCCGAGTaGGGCAGGGACTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQESGTSE*GRDSLL
Trigger: CAGCAGGGAGTCCCTGCCTCACTCGGAGGTCCCTGA...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGTGGGGGCAGAAGTGTaGCTCGCTGGCAATGCCACA +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPVGAEV*LAGNAT
Trigger: TGTGGCATTGCCAGCGAGGCACACTTCTGCCCCCAC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGTGCATAGGCCAAGAGTaGAGCCAGCTGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLCIGQE*SQLQDE
Trigger: CTCATCCTGCAGCTGGCTGCACTCTTGGCCTATGCA...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCCCCCTCCTGCCAGTGTaGCTGGAAGACACGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPPLLPV*LEDTSQ
Trigger: CTGGCTCGTGTCTTCCAGGCACACTGGCAGGAGGGG...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGAGGGTGATGGCCAGTTaGAGGGGCAGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQRVMAS*RGRPQA
Trigger: AGCCTGGGGCCTGCCCCTGCAACTGGCCATCACCCT...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGGACAGCCCCCGCACTaGCACATGCCCACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKGQPPH*HMPTQP
Trigger: AGGCTGCGTGGGCATGTGGCAGTGCGGGGGCTGTCC...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCTTCTTGCTTTCTTCCTaGAGCAGGCGACCAGATGTG +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPFLLSS*SRRPDV
Trigger: CACATCTGGTCGCCTGCTGCAGGAAGAAAGCAAGAA...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTTGCTTGAAGGGTGCCTaGTGCAAAGAGCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTCLKGA*CKEHCP
Trigger: CGGGCAGTGCTCTTTGCAGCAGGCACCCTTCAAGCA...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGATGCAGAGTGGCAGCTaGTTGAAGGGTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGMQSGS*LKGACC
Trigger: GCAGCAGGCACCCTTCAAGCAGCTGCCACTCTGCAT...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGCGAATGTCCAGCCACTaGATTGTGGCACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRRMSSH*IVALVA
Trigger: TGCCACCAGTGCCACAATGCAGTGGCTGGACATTCG...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCACTGCTTCAGGGCCTaGCACAAGGCCCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGHCFRA*HKALSL
Trigger: TAAGGACAGGGCCTTGTGGCAGGCCCTGAAGCAGTG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCGCCAAACACAACAGCTaGCTCTGCCCAAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPAKHNS*LCPRDK
Trigger: CTTATCTCTTGGGCAGAGGCAGCTGTTGTGTTTGGC...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGAGGCAGGGACTCCCTaGTGGCTGCTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQEAGTP*WLLCSS
Trigger: GCTGCTGCAGAGCAGCCAGCAGGGAGTCCCTGCCTC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAGCCACGCTGCGCTGCTaGCGCACAGCTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAATLRC*RTAGPE
Trigger: TTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGC...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCAAGGAGGCACATCGTaGCTGACTCAGGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGQGGTS*LTQEPD
Trigger: GTCTGGCTCCTGAGTCAGCCACGATGTGCCTCCTTG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGCGGGCCATGGGCCCTaGGAGAAGTGGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKAGHGP*EKWGQK
Trigger: CTTCTGCCCCCACTTCTCCCAGGGCCCATGGCCCGC...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACGAGCCAGGTAGGTTaGCTGCAGTCTGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQTSQVG*LQSVGE
Trigger: CTCCCCCACAGACTGCAGCCAACCTACCTGGCTCGT...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGATGCCCACGCAGCCTGTaGAGCTCTCCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRCPRSL*SSPAMA
Trigger: TGCCATCGCTGGAGAGCTCCACAGGCTGCGTGGGCA...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGGGTTCTGTACTGACTaGGCTGTGGCTGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWGFCTD*AVAESD
Trigger: GTCTGACTCAGCCACAGCCCAGTCAGTACAGAACCC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGGGCAGTGGGAACACTaGGATGTAGAGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRGQWEH*DVEVSR
Trigger: CCTGGAAACCTCTACATCCCAGTGTTCCCACTGCCC...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGGGCAGTGGGAACACTaGGATGTAGAGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWGQWEH*DVEVSR
Trigger: CCTGGAAACCTCTACATCCCAGTGTTCCCACTGCCC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCCAGCCACTGCATTGTaGCACTGGTGGCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTPATAL*HWWQTG
Trigger: GCCAGTTTGCCACCAGTGCCACAATGCAGTGGCTGG...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATGGTGCCCAGCTGCAGTaGCTGGCCCTGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYGAQLQ*LALGFL
Trigger: CAGGAACCCCAGGGCCAGCCACTGCAGCTGGGCACC...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGGCATTCGGCAGCCCTaGCCGGTACGCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQGIRQP*PVRQHH
Trigger: GTGGTGTTGGCGTACCGGCCAGGGCTGCCGAATGCC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTGGGATGATAGCCAACTaGGATCTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTGMIAN*DLSWAS
Trigger: GCTGGCCCAGCTCAGATCCCAGTTGGCTATCATCCC...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGGGGATGATAGCCAACTaGGATCTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGGMIAN*DLSWAS
Trigger: GCTGGCCCAGCTCAGATCCCAGTTGGCTATCATCCC...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCAACAAAAAGGGCTCCTaGGGGATGATAGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPNKKGS*GMIANW
Trigger: CCAGTTGGCTATCATCCCCCAGGAGCCCTTTTTGTT...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGSWSVF*STLAVA
Trigger: GGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCT...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCGTCTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELVCWSS*SVFWST
Trigger: TGTGGACCAGAAGACAGACCAGCTGCTCCAGCAGAC...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGTGTATAGGCCCGGCCTaGATCAGAGAGAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLCIGPA*IRERGE
Trigger: TTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACA...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGTGTATAGGCCCGGCCTaGATCAGAGAGAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRCIGPA*IRERGE
Trigger: TTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACA...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGCCAGAGCAGAGGCCTaGTTCTGGGGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPARAEA*FWGSLR
Trigger: CCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGC...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACTGCTGCCGCACAGCTaGGCCAGAAGTCGTTCCATG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARLLPHS*ARSRSM
Trigger: CATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR TCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTCCCCGGGAGTGGCCATaGGGGGAATGTGCCAACACC +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGPREWP*GECANT
Trigger: GGTGTTGGCACATTCCCCTCATGGCCACTCCCGGGG...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGCAGGAGGGGCTCCTaGGCCCAGGGTTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRGRRGS*AQGSRG
Trigger: ACCACGAGAACCCTGGGCTCAGGAGCCCCTCCTGCC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGGGCAGGAGGGGCTCCTaGGCCCAGGGTTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWGRRGS*AQGSRG
Trigger: ACCACGAGAACCCTGGGCTCAGGAGCCCCTCCTGCC...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAGCCACCTCAGGTTCTTaGTCCTCGGGCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAATSGS*SSGRRG
Trigger: GCCCCTCCTGCCCGAGGATCAAGAACCTGAGGTGGC...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGACCTCATACCCATACTaGTTCTGCAGCACAGCACCC +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWTSYPY*FCSTAP
Trigger: GGGTGCTGTGCTGCAGAATCAGTATGGGTATGAGGT...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGTGGCAATCACTTTGTTaGCGGGTACCAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRWQSLC*RVPAAV
Trigger: CACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCA...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTGGCAATCACTTTGTTaGCGGGTACCAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWWQSLC*RVPAAV
Trigger: CACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACCTGGTTGCTGGCCATaGTGCGGGTGGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARPGCWP*CGWQSL
Trigger: AAGTGATTGCCACCCGCATCATGGCCAGCAACCAGG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGCCTCCAGGAGACCATTaGTCACCCAAGGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWPPGDH*SPKGSC
Trigger: ACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGG...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCTCCAGGAGACCATTaGTCACCCAAGGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLPPGDH*SPKGSC
Trigger: ACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGG...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTGGTCGCATACACGGTaGGGTAGAAACGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWWSHTR*GRNGCL
Trigger: CAGACATCCGTTTCTACCTCACCGTGTATGCGACCA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGCACGTGATAGTACATaGTGCTCAAAGGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWARDST*CSKAAA
Trigger: TGCTGCCGCCTTTGAGCATCATGTACTATCACGTGC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCCCGAACAGTCCCACTaGACAAAAAGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQPEQSH*TKRAPG
Trigger: CCCAGGAGCCCTTTTTGTTCAGTGGGACTGTTCGGG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACACCAGCACCCGGTCTaGGTTCAGGATCGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARHQHPV*VQDRVE
Trigger: CTCAACACGATCCTGAACTCAGACCGGGTGCTGGTG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCATCAGGGACCTCCGAGTaGGGCAGGGACTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDASGTSE*GRDSLL
Trigger: CAGCAGGGAGTCCCTGCCTCACTCGGAGGTCCCTGA...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACCGGAACCTCAAACCTaGAGAAGCTGCTGTGCACCG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARPEPQT*RSCCAP
Trigger: CGGTGCACAGCAGCTTCTTCAGGTTTGAGGTTCCGG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGGGCGCCATCCAGGACTaGAGGGTAGGATGTAATCTG +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGGAIQD*RVGCNL
Trigger: CAGATTACATCCTACCCTGCAGTCCTGGATGGCGCC...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGATCCAGGCCACAGCTaGCACGCACCCTGCCAACAC +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQDPGHS*HAPCQH
Trigger: GTGTTGGCAGGGTGCGTGGCAGCTGTGGCCTGGATC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGAGCCGTGCCCCCTCCTaGCAGTGTGCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQESRAPS*QCAWKT
Trigger: TGTCTTCCAGGCACACTGGCAGGAGGGGGCACGGCT...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAACCCGCGCATCCTTGTaGTGTAGCATTTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGTRASL*CSISWL
Trigger: CAACCAGGAAATGCTACAGCACAAGGATGCGCGGGT...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGTCAGCATGCCCAGGATaGACCTGTGCAGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQSACPG*TCAAGG
Trigger: ACCACCTGCTGCACAGGTGCATCCTGGGCATGCTGA...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGCAGGCGACCAGATGTaGTCTGCTCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEAGDQM*SAPPPA
Trigger: GGCTGGAGGAGGAGCAGAGCACATCTGGTCGCCTGC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACGGCGCCCTCCTTCTTaGTTTCTTCCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRRRPPS*FLPAAG
Trigger: GCCTGCTGCAGGAAGAAAGCAAGAAGGAGGGCGCCG...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCTGCCCGGAGAAGGGTaGAGAGGGAATTTACACCAG +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGLPGEG*RGNLHQ
Trigger: CTGGTGTAAATTCCCTCTGCACCCTTCTCCGGGCAG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGATGCTGCAAAGAGCACTaGCCGGAGAAGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARCCKEH*PEKGAE
Trigger: CTCTGCACCCTTCTCCGGGCAGTGCTCTTTGCAGCA...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGAGCCCCAGCAGGCCTaGCGCGTTGGCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWREPQQA*RVGQED
Trigger: ATCCTCCTGGCCAACGCGGCAGGCCTGCTGGGGCTC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCAACTTCTCTCCAGGCTaGACGCAGAAGGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELNFSPG*TQKVTP
Trigger: TGGAGTGACCTTCTGCGTGCAGCCTGGAGAGAAGTT...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCACAACAGCTGCCTCTaGCCAAGAGATAAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGHNSCL*PRDKLR
Trigger: CCGGAGCTTATCTCTTGGGCAGAGGCAGCTGTTGTG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGGGGAAGCCTCAGGATaGTGCCCACCAAGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARGEASG*CPPRSD
Trigger: ATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGATGGACGCCTCACCTTaGCATCTGTTTTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLMDASP*HLFFPS
Trigger: GGAGGGGAAAAACAGATGGCAAGGTGAGGCGTCCAT...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR CCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCACGAGCCAGGTAGGTTaGCTGCAGTCTGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPTSQVG*LQSVGE
Trigger: CTCCCCCACAGACTGCAGCCAACCTACCTGGCTCGT...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTGCTGTAGCATTTCCTaGTTGCTGGCCATGATGCGG +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWCCSIS*LLAMMR
Trigger: CCGCATCATGGCCAGCAACCAGGAAATGCTACAGCA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGAGGTCGAGGAAAAGCTaGATCCGGTCCAAGGACACT +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLRSRKS*IRSKDT
Trigger: AGTGTCCTTGGACCGGATCCAGCTTTTCCTCGACCT...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGACTGGGGGTTGTGGTTTaGAAGGTCGAGGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGLGVVV*KVEEKL
Trigger: CAGCTTTTCCTCGACCTTCCAAACCACAACCCCCAG...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCAGGCTGGTTCCAACTaGGTCCCAGGAGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQQAGSN*VPGEQG
Trigger: GCCTTGTTCTCCTGGGACCCAGTTGGAACCAGCCTG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGGGATGTTGTCTCGGATaGTGGCAAACTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLGCCLG*WQTGSR
Trigger: CCTGGATCCAGTTTGCCACCATCCGAGACAACATCC...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATCCCCCACCTCTGTCTaGTCTCCAGCAGGCAGGATA +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPSPTSV*SPAGRI
Trigger: TATCCTGCCTGCTGGAGACCAGACAGAGGTGGGGGA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTGGGTTCTGTACTGACTaGGCTGTGGCTGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTGFCTD*AVAESD
Trigger: GTCTGACTCAGCCACAGCCCAGTCAGTACAGAACCC...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGCCTCAAACCTGTAGGTaGCCCCTGTGGCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEPQTCR*PLWPGA
Trigger: TGCTCCGGGCCACAGGGGCCACCTACAGGTTTGAGG...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGATTAGCGAGGCCCTGCTaGTGCTGCACCAGAGCGATG +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRLARPC*CCTRAM
Trigger: CATCGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAA...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGCAAGCCCACCAGCCCTaGGTTAGCGAGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKQAHQP*VSEALL
Trigger: CAGCAGGGCCTCGCTAACCCAGGGCTGGTGGGCTTG...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGCACTCGCCCTGAACTaGGCTCTAGCAGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPALALN*ALAAGR
Trigger: TCTTCCGGCTGCTAGAGCCCAGTTCAGGGCGAGTGC...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGSWSVF*STLAVA
Trigger: GGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCT...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTSWSVF*STLAVA
Trigger: GGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGTTGCAGATGGTCTGCTaGAGCAGCTGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLLQMVC*SSWSVF
Trigger: GAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAA...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGCAAAGCGTTTGCAGATaGTCTGCTGGAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWQSVCR*SAGAAG
Trigger: ACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTG...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAGCTGGTTGCGCAGGGTaGCCGGGGAGTCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAAGCAG*PGSPAL
Trigger: TAGAGCTGGACTCCCCGGCCACCCTGCGCAACCAGC...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGCAGAGGCCTGGTTCTaGGGAAGCCTCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRAEAWF*GSLRML
Trigger: CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCAGAAAAACCCACCTaGCGTTCCAGATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLPEKPT*RSRCKR
Trigger: CCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGG...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGCAGCCAGCTGCAGGATaGGCAAGCATAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKQPAAG*ASIGGP
Trigger: TGGCCCGCCTATGCTTGCTCATCCTGCAGCTGGCTG...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTAGGCGGCAAATGTCCTaGGGCTGCCGGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGRRQMS*GCRSSP
Trigger: TGGAGAGCTCCGGCAGCCTCAGGACATTTGCCGCCT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGCAGCAGTGCCAAGATaGGACCACCCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQAAVPR*DHPRRP
Trigger: TGGCCTTCGTGGGTGGTCTCATCTTGGCACTGCTGC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGTGGTCGCATACACGGTaGGGTAGAAACGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGWSHTR*GRNGCL
Trigger: CAGACATCCGTTTCTACCTCACCGTGTATGCGACCA...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCACCACTGCCGCCCCCATaGGCTGTAGCCGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAPLPPP*AVAECP
Trigger: TGGACATTCGGCTACAGCTCATGGGGGCGGCAGTGG...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTCCACTGCCGCCCCCATaGGCTGTAGCCGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGPLPPP*AVAECP
Trigger: TGGACATTCGGCTACAGCTCATGGGGGCGGCAGTGG...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGATCAGGGACCTCCGAGTaGGGCAGGGACTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRSGTSE*GRDSLL
Trigger: CAGCAGGGAGTCCCTGCCTCACTCGGAGGTCCCTGA...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAACGGGCCAGCAAGGGTaGCAGCCAGGCATAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRTGQQG*QPGIGK
Trigger: TTTTCCTATGCCTGGCTGGCACCCTTGCTGGCCCGT...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCTTCAGCAGTCCAAGTaGCAGATAGCACCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLLQQSK*QIAPSK
Trigger: TTTGGACGGTGCTATCTGGCACTTGGACTGCTGAAG...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCACGACCTTCCCCACGATaGCCACCAGCATACCCTTTT +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPRPSPR*PPAYPF
Trigger: AAAAGGGTATGCTGGTGGGCATCGTGGGGAAGGTCG...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTGCAGGCGACCAGATGTaGTCTGCTCCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGAGDQM*SAPPPA
Trigger: GGCTGGAGGAGGAGCAGAGCACATCTGGTCGCCTGC...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTTCTTGCTTTCTTCCTaGAGCAGGCGACCAGATGTG +
Preference number: 4 (lower is better)
Translates to: SSQHLCIGPAWIRERGELFLLSS*SRRPDV
Trigger: CACATCTGGTCGCCTGCTGCAGGAAGAAAGCAAGAA...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGGCGTTCCGCGTGGCTTaGATGAGAAGCAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQAFRVA*MRSREK
Trigger: CTTCTCTCTGCTTCTCATGCAAGCCACGCGGAACGC...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGCGTTCCGCGTGGCTTaGATGAGAAGCAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPAFRVA*MRSREK
Trigger: CTTCTCTCTGCTTCTCATGCAAGCCACGCGGAACGC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACGAATGTCCAGCCACTaGATTGTGGCACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARRMSSH*IVALVA
Trigger: TGCCACCAGTGCCACAATGCAGTGGCTGGACATTCG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACACTGCTTCAGGGCCTaGCACAAGGCCCTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRHCFRA*HKALSL
Trigger: TAAGGACAGGGCCTTGTGGCAGGCCCTGAAGCAGTG...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCACAACAGCTGCCTCTaGCCAAGAGATAAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQHNSCL*PRDKLR
Trigger: CCGGAGCTTATCTCTTGGGCAGAGGCAGCTGTTGTG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGTGTTGGCAAAGCGTTTaGAGATGGTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QHLCIGPAWIRERGELCRCWQSV*RWSAGA
Trigger: TGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACA...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTCTGCTCTGCAGCAGCTaGTGGAACAGGGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGLLCSS*WNREWG
Trigger: GCCCCACTCCCTGTTCCAGCAGCTGCTGCAGAGCAG...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCACCCTGCTGGCTGCTCTaGAGCAGCTGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAPCWLL*SSCWNR
Trigger: CCTGTTCCAGCAGCTGCTGCAGAGCAGCCAGCAGGG...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGGGAAGCCTCAGGATaGTGCCCACCAAGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPGEASG*CPPRSD
Trigger: ATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAAGTGGGCTCCTATaGCAGAAAAACCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARASGLL*QKNPPG
Trigger: GCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGC...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGCAAGTGGGCTCCTATaGCAGAAAAACCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPASGLL*QKNPPG
Trigger: GCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTACACCTCTAGCCCTATaGGTCCTGGGCCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGTPLAL*VLGLPL
Trigger: CAGGGGCAGGCCCAGGACCCATAGGGCTAGAGGTGT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATCACAGGGCCAGGCTGTaGCTGATCCAGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYHRARL*LIQATA
Trigger: AGCTGTGGCCTGGATCAGCCACAGCCTGGCCCTGTG...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAAGAAGTGTGCCTCGCTaGCAATGCCACAACACGGTC +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARRSVPR*QCHNTV
Trigger: GACCGTGTTGTGGCATTGCCAGCGAGGCACACTTCT...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTAGGCCCCAGGCTTCATaGAAGCTCCCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTRPQAS*KLPAKL
Trigger: TAACTTTGCTGGGAGCTTCCATGAAGCCTGGGGCCT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGTGCTGTAGCATTTCCTaGTTGCTGGCCATGATGCGG +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGCCSIS*LLAMMR
Trigger: CCGCATCATGGCCAGCAACCAGGAAATGCTACAGCA...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATTGGATCCAGGGTTCCTaGGTGGCCAGGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYWIQGS*VARPKP
Trigger: GGGCTTTGGCCTGGCCACCCAGGAACCCTGGATCCA...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACACCTGTGCAGCAGGTaGTTGGCCACATCTGCATCC +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRHLCSR*LATSAS
Trigger: GGATGCAGATGTGGCCAACCACCTGCTGCACAGGTG...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATCTCAGCCCAGGCTTTaGGGACAGCTTGTACCAGTG +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPSQPRL*GQLVPV
Trigger: CACTGGTACAAGCTGTCCCCAAAGCCTGGGCTGAGA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACATTGGGGGCAGCTTTaGGCAGTGGGAACACTGGGA +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRHWGQL*AVGTLG
Trigger: TCCCAGTGTTCCCACTGCCCAAAGCTGCCCCCAATG...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCTGTCTGAGGAGCCATTaGGGGCAGCTTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPCLRSH*GQLWAV
Trigger: CACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACA...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGGCGGCGATGCAGAGTaGCAGCTGCTTGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKGGDAE*QLLEGC
Trigger: GCACCCTTCAAGCAGCTGCCACTCTGCATCGCCGCC...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCAGATGGCTATACAGTaGAGACAGGGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQQMAIQ*RQGEAA
Trigger: GGCAGCCTCACCCTGTCTCCACTGTATAGCCATCTG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGCCTCAAACCTGTAGGTaGCCCCTGTGGCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKPQTCR*PLWPGA
Trigger: TGCTCCGGGCCACAGGGGCCACCTACAGGTTTGAGG...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGGCAAACTGGCACCTCTaGTTTAGCTCAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGANWHL*FSSRSR
Trigger: GCGACTCCTTGAGCTAAACCAGAGGTGCCAGTTTGC...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGACTGCATTGTGGCACTaGTGGCAAACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGTALWH*WQTGTS
Trigger: AGAGGTGCCAGTTTGCCACCAGTGCCACAATGCAGT...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAAACAAAAAGGGCTCCTaGGGGATGATAGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: VPDARGPEQRPGSGEASGNKKGS*GMIANW
Trigger: CCAGTTGGCTATCATCCCCCAGGAGCCCTTTTTGTT...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATCCTTATGTAGGCCCTaGGGGTCCAGGTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPSLCRP*GSRFSR
Trigger: TCGGGAAAACCTGGACCCCCAGGGCCTACATAAGGA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTGGTCCACACTTGCTGTaGCCTCATCGATACACAGGA +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTGPHLL*PHRYTG
Trigger: TCCTGTGTATCGATGAGGCCACAGCAAGTGTGGACC...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTTTGCAGATGGTCTGCTaGAGCAGCTGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTLQMVC*SSWSVF
Trigger: GAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAA...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCAAAGCGTTTGCAGATaGTCTGCTGGAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTQSVCR*SAGAAG
Trigger: ACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTG...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCAAAGCGTTTGCAGATaGTCTGCTGGAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGQSVCR*SAGAAG
Trigger: ACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCATGCTGGAACAGGGAGTaGGGCTGGTTGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDACWNRE*GWLRRV
Trigger: CACCCTGCGCAACCAGCCCCACTCCCTGTTCCAGCA...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATGTATAGGCCCGGCCTaGATCAGAGAGAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPCIGPA*IRERGE
Trigger: TTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGCAGAGGCCTGGTTCTaGGGAAGCCTCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEAEAWF*GSLRML
Trigger: CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGTCGATACACAGGATCTaGGCACTAGGAGTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLSIHRI*ALGVRC
Trigger: ACAGCGAACTCCTAGTGCCCAGATCCTGTGTATCGA...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505344.1
CDS-3UTR TCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATACAGCAGGTAGAGGGTaGTGGCCAGTTGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYTAGRG*WPVAGA
Trigger: TGCCCCTGCAACTGGCCATCACCCTCTACCTGCTGT...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGCAGCAGTGCCAAGATaGGACCACCCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKAAVPR*DHPRRP
Trigger: TGGCCTTCGTGGGTGGTCTCATCTTGGCACTGCTGC...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGGCGCCATCCAGGACTaGAGGGTAGGATGTAATCTG +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRGAIQD*RVGCNL
Trigger: CAGATTACATCCTACCCTGCAGTCCTGGATGGCGCC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAAGAGTGCAGCCAGCTaGAGGATGAGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQKSAAS*RMSKHR
Trigger: CCTATGCTTGCTCATCCTGCAGCTGGCTGCACTCTT...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATTGGCTTAGTGGCTCCTaGCCCTCTTCCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYWLSGS*PSSRKP
Trigger: GGGCTTCCTGGAAGAGGGGCAGGAGCCACTAAGCCA...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGGGTACCAGCAGCAGTaGCAAGATGAGACCACCCAC +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQGYQQQ*QDETTH
Trigger: GTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCCGACCTTCCCCACGATaGCCACCAGCATACCCTTTT +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPRPSPR*PPAYPF
Trigger: AAAAGGGTATGCTGGTGGGCATCGTGGGGAAGGTCG...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACAGCTGCTTGAAGGGTaGCTGCTGCAAAGAGCACTG +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRQLLEG*LLQRAL
Trigger: CAGTGCTCTTTGCAGCAGGCACCCTTCAAGCAGCTG...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGCCATAAGGACTCGATaGAGCAGGCGGCGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQAIRTR*SRRRCR
Trigger: TCTGCATCGCCGCCTGCTGCATCGAGTCCTTATGGC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGCACCAGAGCGATGCCTaGGATAGCGCTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKHQSDA*DSADHC
Trigger: GCAGTGGTCAGCGCTATCGCAGGCATCGCTCTGGTG...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATCACCAGAGCGATGCCTaGGATAGCGCTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYHQSDA*DSADHC
Trigger: GCAGTGGTCAGCGCTATCGCAGGCATCGCTCTGGTG...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAACAACAGGGAAGACTTaGCGGAGCCTGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDATTGKT*RSLCGP
Trigger: TGGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTGT...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCTTCTGGTCCACACTTaGTGTGGCCTCATCGATACA +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGLLVHT*CGLIDT
Trigger: TGTATCGATGAGGCCACAGCAAGTGTGGACCAGAAG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCCGTTTGCAGATGGTCTaGTGGAGCAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPRLQMV*WSSWSV
Trigger: GACAGACCAGCTGCTCCAGCAGACCATCTGCAAACG...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTTGTTGGCAAAGCGTTTaGAGATGGTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTCWQSV*RWSAGA
Trigger: TGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACA...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGACTGCTCTGCAGCAGCTaGTGGAACAGGGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRLLCSS*WNREWG
Trigger: GCCCCACTCCCTGTTCCAGCAGCTGCTGCAGAGCAG...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGAAGCCTCAGGATGCTaGCCACCAAGGAGTGATTTC +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRAREASGC*PPRSDF
Trigger: GAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTC...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGGGGAAGCCTCAGGATaGTGCCCACCAAGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQGEASG*CPPRSD
Trigger: ATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGCAAGTGGGCTCCTATaGCAGAAAAACCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPASGLL*QKNPPG
Trigger: GCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGC...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGGAGTTCGCTGTCCTTaGCTGCTCATCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQGVRCP*LLILSS
Trigger: GGAGGACAGGATGAGCAGGCAAGGACAGCGAACTCC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505344.1
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTTGTAATCTGGACTCCTaGGGACAAGGGGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTCNLDS*GQGGRQ
Trigger: TTGTCTTCCCCCTTGTCCCCAGGAGTCCAGATTACA...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGTTGGCTGCAGTCTGTaGGGGAGGCGGCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKVGCSL*GRRQMS
Trigger: GGACATTTGCCGCCTCCCCCACAGACTGCAGCCAAC...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCTGGGGGTTGTGGTTTaGAAGGTCGAGGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQLGVVV*KVEEKL
Trigger: CAGCTTTTCCTCGACCTTCCAAACCACAACCCCCAG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGTGCCCACGCAGCCTGTaGAGCTCTCCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWCPRSL*SSPAMA
Trigger: TGCCATCGCTGGAGAGCTCCACAGGCTGCGTGGGCA...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGTCCAGGGTTCCTGGGTaGCCAGGCCAAAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWSRVPG*PGQSPW
Trigger: CCAAGGGCTTTGGCCTGGCCACCCAGGAACCCTGGA...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGGATGTTGTCTCGGATaGTGGCAAACTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARGCCLG*WQTGSR
Trigger: CCTGGATCCAGTTTGCCACCATCCGAGACAACATCC...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGATGTGCAGCAGGTGGTTaGCCACATCTGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRCAAGG*PHLHPQ
Trigger: CTGTGGATGCAGATGTGGCCAACCACCTGCTGCACA...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGCACCTGTGCAGCAGGTaGTTGGCCACATCTGCATCC +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQHLCSR*LATSAS
Trigger: GGATGCAGATGTGGCCAACCACCTGCTGCACAGGTG...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGAGGGTTGCGCCTCCTaGGAGCTATTCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEEGCAS*ELFSAF
Trigger: GAAGGCTGAGAATAGCTCCCAGGAGGCGCAACCCTC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGGCACTGGTGGCAAACTaGCACCTCTGGTTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQALVAN*HLWFSS
Trigger: TGAGCTAAACCAGAGGTGCCAGTTTGCCACCAGTGC...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGCACTCGCCCTGAACTaGGCTCTAGCAGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKALALN*ALAAGR
Trigger: TCTTCCGGCTGCTAGAGCCCAGTTCAGGGCGAGTGC...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGGCCAGAGCAGAGGCCTaGTTCTGGGGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWARAEA*FWGSLR
Trigger: CCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGC...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACCAGAAAAACCCACCTaGCGTTCCAGATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARPEKPT*RSRCKR
Trigger: CCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGACTCTGCAGGGGGATCTaGGCTGTAGTAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRLCRGI*AVVGLG
Trigger: CCCCAGGCCTACTACAGCCCAGATCCCCCTGCAGAG...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACTCCAATACTGTAGATaGCTCTGCAGGGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARLQYCR*LCRGIW
Trigger: CCAGATCCCCCTGCAGAGCCATCTACAGTATTGGAG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR TCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGGAGCAACAGGGGCCCTaGGAATCCCAACATGGTCCC +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWEQQGP*ESQHGP
Trigger: GGGACCATGTTGGGATTCTCAGGGCCCCTGTTGCTC...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCACCTGGTTGCTGGCCATaGTGCGGGTGGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAPGCWP*CGWQSL
Trigger: AAGTGATTGCCACCCGCATCATGGCCAGCAACCAGG...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGTTCTCAGCCTTCAGCTaGGAGATCCAGTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEFSAFS*EIQWES
Trigger: GCTCTCCCACTGGATCTCTCAGCTGAAGGCTGAGAA...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTGTAGAAACGGATGTCTaGGGAGCCATTGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGVETDV*GAIGGS
Trigger: GCTGCCCCCAATGGCTCCTCAGACATCCGTTTCTAC...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGCCATGAGGGGAATGTaGCAACACCCACAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRAMRGM*QHPQGQ
Trigger: CTGGCCCTGTGGGTGTTGGCACATTCCCCTCATGGC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAGTGCCTCGCTGGCAATaGCACAACACGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAVPRWQ*HNTVST
Trigger: AGTGCTGACCGTGTTGTGGCATTGCCAGCGAGGCAC...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGGTGGGGGCAGAAGTGTaGCTCGCTGGCAATGCCACA +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWVGAEV*LAGNAT
Trigger: TGTGGCATTGCCAGCGAGGCACACTTCTGCCCCCAC...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTACGGGCCAGCAAGGGTaGCAGCCAGGCATAGGAAAA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGTGQQG*QPGIGK
Trigger: TTTTCCTATGCCTGGCTGGCACCCTTGCTGGCCCGT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGCCGTTCAGAGTCAGTaGCTAGTAGGTTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQAVQSQ*LVGSGP
Trigger: AGGCCCTGAACCTACTAGGCACTGACTCTGAACGGC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATGGGTACCAGCAGCAGTaGCAAGATGAGACCACCCAC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYGYQQQ*QDETTH
Trigger: GTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCC...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATGAGCATTCGCACCAGTaGCAGGGCCGTGAACACCTT +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYEHSHQ*QGREHL
Trigger: AAGGTGTTCACGGCCCTGGCACTGGTGCGAATGCTC...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGAGAACAAGGCTCCATaGAGCTCCAATACTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LCIGPAWIRERGELCRVWENKAP*SSNTVD
Trigger: ATCTACAGTATTGGAGCTGCATGGAGCCTTGTTCTC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGGAGAACAAGGCTCCATaGAGCTCCAATACTGTAGAT +
Preference number: 4 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLENKAP*SSNTVD
Trigger: ATCTACAGTATTGGAGCTGCATGGAGCCTTGTTCTC...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGACGGCGCCCTCCTTCTTaGTTTCTTCCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRRRPPS*FLPAAG
Trigger: GCCTGCTGCAGGAAGAAAGCAAGAAGGAGGGCGCCG...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGCTGCCCGGAGAAGGGTaGAGAGGGAATTTACACCAG +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQELPGEG*RGNLHQ
Trigger: CTGGTGTAAATTCCCTCTGCACCCTTCTCCGGGCAG...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTTGCTGCAAAGAGCACTaGCCGGAGAAGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGCCKEH*PEKGAE
Trigger: CTCTGCACCCTTCTCCGGGCAGTGCTCTTTGCAGCA...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCAACTTCTCTCCAGGCTaGACGCAGAAGGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPNFSPG*TQKVTP
Trigger: TGGAGTGACCTTCTGCGTGCAGCCTGGAGAGAAGTT...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCCAAACACAACAGCTaGCTCTGCCCAAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARAKHNS*LCPRDK
Trigger: CTTATCTCTTGGGCAGAGGCAGCTGTTGTGTTTGGC...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCACTTCTGGTCCACACTTaGTGTGGCCTCATCGATACA +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPLLVHT*CGLIDT
Trigger: TGTATCGATGAGGCCACAGCAAGTGTGGACCAGAAG...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGCGTTTGCAGATGGTCTaGTGGAGCAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQERLQMV*WSSWSV
Trigger: GACAGACCAGCTGCTCCAGCAGACCATCTGCAAACG...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAAAGAGTAATCCAGGGTaGCCTTTTCCCTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPKSNPG*PFPFWG
Trigger: TCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTT...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAAAGAGTAATCCAGGGTaGCCTTTTCCCTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARKSNPG*PFPFWG
Trigger: TCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTT...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGAAGCCTCAGGATGCTaGCCACCAAGGAGTGATTTC +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSREASGC*PPRSDF
Trigger: GAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAACCTGGCGTTCCAGATaGAAGAGGGCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDATWRSR*KRARAE
Trigger: CTCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGT...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTACCTGGCGTTCCAGATaGAAGAGGGCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGTWRSR*KRARAE
Trigger: CTCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGACTGAGAATCCCAACATaGTCCCCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRLRIPT*SPPASA
Trigger: TGCTGAAGCTGGTGGGGACCATGTTGGGATTCTCAG...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTTCCCCCACCTCTGTCTaGTCTCCAGCAGGCAGGATA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGSPTSV*SPAGRI
Trigger: TATCCTGCCTGCTGGAGACCAGACAGAGGTGGGGGA...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGTGTGCAGCAGGTGGTTaGCCACATCTGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQECAAGG*PHLHPQ
Trigger: CTGTGGATGCAGATGTGGCCAACCACCTGCTGCACA...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATGCAGAGAGAAGAGGATaGCTAAGGCCAAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYAERRG*LRPSPG
Trigger: GCCAGGGCTTGGCCTTAGCCATCCTCTTCTCTCTGC...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGAGGGTTGCGCCTCCTaGGAGCTATTCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKEGCAS*ELFSAF
Trigger: GAAGGCTGAGAATAGCTCCCAGGAGGCGCAACCCTC...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAAGGTATCGGCCAGATaGCTATACAGTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQKVSAR*LYSGDR
Trigger: CCTGTCTCCACTGTATAGCCATCTGGCCGATACCTT...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATATCACCTCACTCAGGTaGCACTGCTTCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYITSLR*HCFRAC
Trigger: GCAGGCCCTGAAGCAGTGCCACCTGAGTGAGGTGAT...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGTCTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQVCWSS*SVFWST
Trigger: TGTGGACCAGAAGACAGACCAGCTGCTCCAGCAGAC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTTCAGCACTGTCTTGTTaGCAAAGCGTTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTSALSC*QSVCRW
Trigger: CCATCTGCAAACGCTTTGCCAACAAGACAGTGCTGA...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATCCTTCTGGGGAAGTGTaGAGAGGTAGAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYPSGEV*RGRAPE
Trigger: CTCTGGGGCTCTACCTCTCCACACTTCCCCAGAAGG...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGCCAGAAGTCGTTCCATaGACGCCTCACCTTGCCATC +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEPEVVP*TPHLAI
Trigger: GATGGCAAGGTGAGGCGTCCATGGAACGACTTCTGG...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR TCA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTAACAGAGAAGCCACTTaGTTTGGGCTCCTAATCTAC +
Preference number: 4 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTNREAT*FGLLIY
Trigger: GTAGATTAGGAGCCCAAATCAAGTGGCTTCTCTGTT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR TCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTTCCGCGTGGCTTGCATaGGAAGCAGAGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGSAWLA*EAERRG
Trigger: TCCTCTTCTCTCTGCTTCTCATGCAAGCCACGCGGA...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCTGCCCACCAAGGAGTaGTTTCCAAAGAGTAATCCA +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQLPTKE*FPKSNP
Trigger: TGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCACTGCCCACCAAGGAGTaGTTTCCAAAGAGTAATCCA +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPLPTKE*FPKSNP
Trigger: TGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAG...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCCTGAAGAAGCTGCTGTaGACCGGATTCCGATATCCT +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPLKKLL*TGFRYP
Trigger: AGGATATCGGAATCCGGTGCACAGCAGCTTCTTCAG...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCTTCGCTGTCCTTGCCTaGTCATCCTGTCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPFAVLA*SSCPPF
Trigger: AAATGGAGGACAGGATGAGCAGGCAAGGACAGCGAA...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505344.1
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGAAGTGTGCCTCGCTaGCAATGCCACAACACGGTC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYRSVPR*QCHNTV
Trigger: GACCGTGTTGTGGCATTGCCAGCGAGGCACACTTCT...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGCAGGCTGGTTCCAACTaGGTCCCAGGAGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWQAGSN*VPGEQG
Trigger: GCCTTGTTCTCCTGGGACCCAGTTGGAACCAGCCTG...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGGACAGCTTGTACCAGTaGCAGAATCTCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQDSLYQ*QNLRGR
Trigger: CCTCCCTCTGAGATTCTGCCACTGGTACAAGCTGTC...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGTCTCAGCCCAGGCTTTaGGGACAGCTTGTACCAGTG +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKSQPRL*GQLVPV
Trigger: CACTGGTACAAGCTGTCCCCAAAGCCTGGGCTGAGA...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGCACTGGTGGCAAACTaGCACCTCTGGTTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEALVAN*HLWFSS
Trigger: TGAGCTAAACCAGAGGTGCCAGTTTGCCACCAGTGC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATCAGCACTGTCTTGTTaGCAAAGCGTTTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPSALSC*QSVCRW
Trigger: CCATCTGCAAACGCTTTGCCAACAAGACAGTGCTGA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGCCTTCTGGGGAAGTGTaGAGAGGTAGAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWPSGEV*RGRAPE
Trigger: CTCTGGGGCTCTACCTCTCCACACTTCCCCAGAAGG...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGACCTTCTGGGGAAGTGTaGAGAGGTAGAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRPSGEV*RGRAPE
Trigger: CTCTGGGGCTCTACCTCTCCACACTTCCCCAGAAGG...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGCATAGGAAAAGCGTaGCAGCCAACTCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRGIGKA*QPTLPI
Trigger: GATGGGGAGAGTTGGCTGTCACGCTTTTCCTATGCC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATACCTCATACCCATACTaGTTCTGCAGCACAGCACCC +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYTSYPY*FCSTAP
Trigger: GGGTGCTGTGCTGCAGAATCAGTATGGGTATGAGGT...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTCTCTGCAGGGGGATCTaGACAGAGAAGCCACTTGAT +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGLCRGI*TEKPLD
Trigger: ATCAAGTGGCTTCTCTGTTCAGATCCCCCTGCAGAG...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR TCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGTCCGCGTGGCTTGCATaGGAAGCAGAGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWSAWLA*EAERRG
Trigger: TCCTCTTCTCTCTGCTTCTCATGCAAGCCACGCGGA...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR TCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTGCACGTGATAGTACATaGTGCTCAAAGGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGARDST*CSKAAA
Trigger: TGCTGCCGCCTTTGAGCATCATGTACTATCACGTGC...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAAGAGTGCAGCCAGCTaGAGGATGAGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKKSAAS*RMSKHR
Trigger: CCTATGCTTGCTCATCCTGCAGCTGGCTGCACTCTT...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGATGCATAGGCCAAGAGTaGAGCCAGCTGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRCIGQE*SQLQDE
Trigger: CTCATCCTGCAGCTGGCTGCACTCTTGGCCTATGCA...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGCTTCAGCAGTCCAAGTaGCAGATAGCACCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQLQQSK*QIAPSK
Trigger: TTTGGACGGTGCTATCTGGCACTTGGACTGCTGAAG...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTACCCGCGCATCCTTGTaGTGTAGCATTTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGTRASL*CSISWL
Trigger: CAACCAGGAAATGCTACAGCACAAGGATGCGCGGGT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGCTCCTTGTACAGCTGTaGATCAAATGTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGLLVQL*IKCLPK
Trigger: TTTGGGAAGACATTTGATGCACAGCTGTACAAGGAG...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGCTTCTGGTCCACACTTaGTGTGGCCTCATCGATACA +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQLLVHT*CGLIDT
Trigger: TGTATCGATGAGGCCACAGCAAGTGTGGACCAGAAG...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTCTGAGAATCCCAACATaGTCCCCACCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGLRIPT*SPPASA
Trigger: TGCTGAAGCTGGTGGGGACCATGTTGGGATTCTCAG...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTAGGCCCCAGGCTTCATaGAAGCTCCCAGCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGRPQAS*KLPAKL
Trigger: TAACTTTGCTGGGAGCTTCCATGAAGCCTGGGGCCT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGTCGAGGAAAAGCTaGATCCGGTCCAAGGACACT +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDARSRKS*IRSKDT
Trigger: AGTGTCCTTGGACCGGATCCAGCTTTTCCTCGACCT...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATGACAGCTTGTACCAGTaGCAGAATCTCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYDSLYQ*QNLRGR
Trigger: CCTCCCTCTGAGATTCTGCCACTGGTACAAGCTGTC...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAACTGCATTGTGGCACTaGTGGCAAACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDATALWH*WQTGTS
Trigger: AGAGGTGCCAGTTTGCCACCAGTGCCACAATGCAGT...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGATCCTTATGTAGGCCCTaGGGGTCCAGGTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRSLCRP*GSRFSR
Trigger: TCGGGAAAACCTGGACCCCCAGGGCCTACATAAGGA...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTGGTCCACACTTGCTGTaGCCTCATCGATACACAGGA +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGGPHLL*PHRYTG
Trigger: TCCTGTGTATCGATGAGGCCACAGCAAGTGTGGACC...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATCCAGAAAAACCCACCTaGCGTTCCAGATGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYPEKPT*RSRCKR
Trigger: CCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGG...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp GGGGAAGCCTCAGGATGCTGCCCACCAAGGAGTGATTTCCAAAGAGTAATCCAGCTGCCCACCAAGGAGTaGTTTCCAAAGAGTAATCCA +
Preference number: 4 (lower is better)
Translates to: GEASGCCPPRSDFQRVIQLPTKE*FPKSNP
Trigger: TGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAG...CTGGATTACTCTTTGGAAATCACTCCTTGGTGGGCAGCATCCTGAGGCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGACTCCCTTCCTGCCTTaGACATCTTATCCCTACTCC +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKTPFLP*TSYPYS
Trigger: GGAGTAGGGATAAGATGTGCAAGGCAGGAAGGGAGT...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR GCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCAATCAACTCCCTTCCTaGCTTGCACATCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPNQLPS*LAHLIP
Trigger: AGGGATAAGATGTGCAAGGCAGGAAGGGAGTTGATT...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR GCA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACTCCTTGTACAGCTGTaGATCAAATGTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARLLVQL*IKCLPK
Trigger: TTTGGGAAGACATTTGATGCACAGCTGTACAAGGAG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR GCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATTGTTGGCAAAGCGTTTaGAGATGGTCTGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYCWQSV*RWSAGA
Trigger: TGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACA...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR GCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAAGAGTAATCCAGGGTaGCCTTTTCCCTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYKSNPG*PFPFWG
Trigger: TCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTT...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTTGTTGTCTCGGATGGTaGCAAACTGGATCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGCCLGW*QTGSRV
Trigger: AACCCTGGATCCAGTTTGCCACCATCCGAGACAACA...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGATTGAAGAAAGTCACTaGTGCCATAAGGACTCGATG +
Preference number: 4 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQIEESH*CHKDSM
Trigger: CATCGAGTCCTTATGGCACCAGTGACTTTCTTCAAT...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAAGGTATCGGCCAGATaGCTATACAGTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAKVSAR*LYSGDR
Trigger: CCTGTCTCCACTGTATAGCCATCTGGCCGATACCTT...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGCAAACTGGCACCTCTaGTTTAGCTCAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRANWHL*FSSRSR
Trigger: GCGACTCCTTGAGCTAAACCAGAGGTGCCAGTTTGC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGATTGCAGATGGTCTGCTaGAGCAGCTGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRLQMVC*SSWSVF
Trigger: GAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAA...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGATCGTGTTGAGCCTATaGGCAATGGTCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKIVLSL*AMVSTV
Trigger: GACAGTGCTGACCATTGCCCATAGGCTCAACACGAT...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGTGTTGTCTCGGATGGTaGCAAACTGGATCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWCCLGW*QTGSRV
Trigger: AACCCTGGATCCAGTTTGCCACCATCCGAGACAACA...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCATTGAAGAAAGTCACTaGTGCCATAAGGACTCGATG +
Preference number: 4 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPIEESH*CHKDSM
Trigger: CATCGAGTCCTTATGGCACCAGTGACTTTCTTCAAT...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGATCGTGTTGAGCCTATaGGCAATGGTCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWIVLSL*AMVSTV
Trigger: GACAGTGCTGACCATTGCCCATAGGCTCAACACGAT...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR TCA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGCGGATTCCGATATCCTaGGAACTGGTGTATGCAAAA +
Preference number: 4 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWRIPIS*ELVYAK
Trigger: TTTTGCATACACCAGTTCTCAGGATATCGGAATCCG...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR CCA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGAAGCCACTTGATTTaGGCTCCTAATCTACCACAA +
Preference number: 4 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYRSHLI*APNLPQ
Trigger: TTGTGGTAGATTAGGAGCCCAAATCAAGTGGCTTCT...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS GCA 90 bp GGCCTGTGGTGTCCCCCTCCCACAGCGGGAGCGGCCACGCTGCGCTaGTGCCGCACAGCTGGGCCAGAAGTCGTTCCATGGACGCCTCAC +
Preference number: 5 (lower is better)
Translates to: GLWCPPPTAGAATLR*CRTAGPEVVPWTPH
Trigger: GTGAGGCGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGGGGACACCACAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372530.9
ENST00000502549.1
CDS GCA 90 bp CTGTGGTGTCCCCCTCCCACAGCGGGAGCGGCCACGCTGCGCTGCTaGCGCACAGCTGGGCCAGAAGTCGTTCCATGGACGCCTCACCTG +
Preference number: 5 (lower is better)
Translates to: LWCPPPTAGAATLRC*RTAGPEVVPWTPHL
Trigger: CAGGTGAGGCGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGGGGACACCACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502549.1
CDS GCA 90 bp AGCGACAAGCCCACCAGCCCTGGGTTAGCGAGGCCCTGCTGGTGCTaGACCAGAGCGATGCCTGCGATAGCGCTGACCACTGCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SDKPTSPGLARPCWC*TRAMPAIALTTAAP
Trigger: GGGGGCGGCAGTGGTCAGCGCTATCGCAGGCATCGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAACCCAGGGCTGGTGGGCTTGTCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 90 bp CTGTGGTGTCCCCCTCCCACAGCGGGAGCGGCCACGCTGCGCTGCTaGCGCACAGCTGGGCCAGAAGTCGTTCCATGGACGCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: LWCPPPTAGAATLRC*RTAGPEVVPWTPHL
Trigger: AAGGTGAGGCGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGGGGACACCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS GCA 90 bp CAGGGCCAAGGCCAAGGGACCCCGGGAGTGGCCATGAGGGGAATGTaGCAACACCCACAGGGCCAGGCTGTGGCTGATCCAGGCCACAGC +
Preference number: 5 (lower is better)
Translates to: QGQGQGTPGVAMRGM*QHPQGQAVADPGHS
Trigger: GCTGTGGCCTGGATCAGCCACAGCCTGGCCCTGTGGGTGTTGGCACATTCCCCTCATGGCCACTCCCGGGGTCCCTTGGCCTTGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp CCCTCCCACAGCGGGAGCGGCCACGCTGCGCTGCTGCCGCACAGCTaGGCCAGAAGTCGTTCCATGGACGCCTCACCTGAAGAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PSHSGSGHAALLPHS*ARSRSMDASPEEAA
Trigger: AGCAGCTTCTTCAGGTGAGGCGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502549.1
CDS GCA 90 bp CCCAGCTCTCGAGCCCGGCAGGCCTCTACTCGGGCTCCCAGTGCCTaGTCCCACCCGCAGAACTTGATGACCCGAATGCCACTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PSSRARQASTRAPSA*SHPQNLMTRMPLSS
Trigger: GCTGCTGAGTGGCATTCGGGTCATCAAGTTCTGCGGGTGGGAGCAGGCACTGGGAGCCCGAGTAGAGGCCTGCCGGGCTCGAGAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CCA 90 bp CGGGCCATGGGCCCTGGGAGAAGTGGGGGCAGAAGTGTGCCTCGCTaGCAATGCCACAACACGGTCAGCACTAGGGCTGGAGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: RAMGPGRSGGRSVPR*QCHNTVSTRAGAGS
Trigger: GCTGCCAGCTCCAGCCCTAGTGCTGACCGTGTTGTGGCATTGCCAGCGAGGCACACTTCTGCCCCCACTTCTCCCAGGGCCCATGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp CCCTCCCACAGCGGGAGCGGCCACGCTGCGCTGCTGCCGCACAGCTaGGCCAGAAGTCGTTCCATGGACGCCTCACCTTGCCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: PSHSGSGHAALLPHS*ARSRSMDASPCHLF
Trigger: AAACAGATGGCAAGGTGAGGCGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS TCA 90 bp GGCCAGCCAAGGTATCGGCCAGATGGCTATACAGTGGAGACAGGGTaGGGCTGCCCAGGCGCCGCAGCTCCCGTGAGGAGGCCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: GQPRYRPDGYTVETG*GCPGAAAPVRRPCS
Trigger: ACTACAGGGCCTCCTCACGGGAGCTGCGGCGCCTGGGCAGCCTCACCCTGTCTCCACTGTATAGCCATCTGGCCGATACCTTGGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 90 bp TGCCCCCTCCTGCCAGTGTGCCTGGAAGACACGAGCCAGGTAGGTTaGCTGCAGTCTGTGGGGGAGGCGGCAAATGTCCTGAGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: CPLLPVCLEDTSQVG*LQSVGEAANVLRLP
Trigger: CGGCAGCCTCAGGACATTTGCCGCCTCCCCCACAGACTGCAGCCAACCTACCTGGCTCGTGTCTTCCAGGCACACTGGCAGGAGGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp GCCCACCAGCCCTGGGGGAGAGAAGTACCAGCTGCTGGGAGAGCTTaGACACCGGGACGTTTGTGGGAGACTCCCCAGGCTGTGGACTGC +
Preference number: 5 (lower is better)
Translates to: AHQPWGREVPAAGRA*TPGRLWETPQAVDC
Trigger: GCAGTCCACAGCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGGCTGGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS-3UTR CAA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGGAGGGTGATGGCCAGTaGCAGGGGCAGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LCIGPAWIRERGELCRVWEGDGQ*QGQAPG
Trigger: GCCTGGGGCCTGCCCCTGCAACTGGCCATCACCCTC...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCGCCAGGCCAAAGCCCTaGGACAGCCCCCGCACTGCC +
Preference number: 5 (lower is better)
Translates to: SSQHLCIGPAWIRERGELARPKP*DSPRTA
Trigger: GGCAGTGCGGGGGCTGTCCAAGGGCTTTGGCCTGGC...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCAGCAGGCCTGCCGCGTaGGCCAGGAGGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPSRPAA*ARRMLR
Trigger: CCTCAACATCCTCCTGGCCAACGCGGCAGGCCTGCT...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS TCA 90 bp CACCCACGAAGGCCACGCCTACCTGCTGGTACAGCAGGTAGAGGGTaGTGGCCAGTTGCAGGGGCAGGCCCCAGGCTTCATGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: HPRRPRLPAGTAGRG*WPVAGAGPRLHGSS
Trigger: GGAGCTTCCATGAAGCCTGGGGCCTGCCCCTGCAACTGGCCATCACCCTCTACCTGCTGTACCAGCAGGTAGGCGTGGCCTTCGTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 90 bp AGCATAGGCGGGCCATGGGCCCTGGGAGAAGTGGGGGCAGAAGTGTaGCTCGCTGGCAATGCCACAACACGGTCAGCACTAGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SIGGPWALGEVGAEV*LAGNATTRSALGLE
Trigger: CTCCAGCCCTAGTGCTGACCGTGTTGTGGCATTGCCAGCGAGGCACACTTCTGCCCCCACTTCTCCCAGGGCCCATGGCCCGCCTATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp TTCTTGATCCTCGGGCAGGAGGGGCTCCTGAGCCCAGGGTTCTCGTaGTCCCCCAGGAGCTGCCCATCCCAGTGCATAGGCCAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: FLILGQEGLLSPGFS*SPRSCPSQCIGQEC
Trigger: GCACTCTTGGCCTATGCACTGGGATGGGCAGCTCCTGGGGGACCACGAGAACCCTGGGCTCAGGAGCCCCTCCTGCCCGAGGATCAAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp ACAGCGACAAGCCCACCAGCCCTGGGGGAGAGAAGTACCAGCTGCTaGGAGAGCTTGGACACCGGGACGTTTGTGGGAGACTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TATSPPALGERSTSC*ESLDTGTFVGDSPG
Trigger: GCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGGCTGGTGGGCTTGTCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS CCA 90 bp GCCCGTCAGGGACAGGGCATAAGACAGCGACAAGCCCACCAGCCCTaGGGGAGAGAAGTACCAGCTGCTGGGAGAGCTTGGACACCGGGA +
Preference number: 5 (lower is better)
Translates to: ARQGQGIRQRQAHQP*GREVPAAGRAWTPG
Trigger: TCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGGCTGGTGGGCTTGTCGCTGTCTTATGCCCTGTCCCTGACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS GCA 90 bp ATGGGCCCTGGGAGAAGTGGGGGCAGAAGTGTGCCTCGCTGGCAATaGCACAACACGGTCAGCACTAGGGCTGGAGCTGGCAGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: MGPGRSGGRSVPRWQ*HNTVSTRAGAGSKA
Trigger: AGCCTTGCTGCCAGCTCCAGCCCTAGTGCTGACCGTGTTGTGGCATTGCCAGCGAGGCACACTTCTGCCCCCACTTCTCCCAGGGCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 90 bp CAGATAGCACCGTCCAAAGGCCCCATACAAGGCCCTCCACAGCCGTaGCCCCTCCTGCCAGTGTGCCTGGAAGACACGAGCCAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: QIAPSKGPIQGPPQP*PLLPVCLEDTSQVG
Trigger: ACCTACCTGGCTCGTGTCTTCCAGGCACACTGGCAGGAGGGGGCACGGCTGTGGAGGGCCTTGTATGGGGCCTTTGGACGGTGCTATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 90 bp GGTGGGTGCAGAGCAGCCGTGTGGTGTAGCTCAGCATGCCCAGGATaGACCTGTGCAGCAGGTGGTTGGCCACATCTGCATCCACAGCGG +
Preference number: 5 (lower is better)
Translates to: GGCRAAVWCSSACPG*TCAAGGWPHLHPQR
Trigger: CCGCTGTGGATGCAGATGTGGCCAACCACCTGCTGCACAGGTGCATCCTGGGCATGCTGAGCTACACCACACGGCTGCTCTGCACCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 90 bp CACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTaGAGGGTGTGGGATTGGGCTCAGGGACCTCCGAGTGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: HLCIGPAWIRERGEL*RVWDWAQGPPSEAG
Trigger: CCCTGCCTCACTCGGAGGTCCCTGAGCCCAATCCCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CCA 90 bp TCCAGGCCACAGCTGCCACGCACCCTGCCAACACCTCTAGCCCTATaGGTCCTGGGCCTGCCCCTGGTGGCAAAGCAACTGGAAGAAGGT +
Preference number: 5 (lower is better)
Translates to: SRPQLPRTLPTPLAL*VLGLPLVAKQLEEG
Trigger: ACCTTCTTCCAGTTGCTTTGCCACCAGGGGCAGGCCCAGGACCCATAGGGCTAGAGGTGTTGGCAGGGTGCGTGGCAGCTGTGGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp GGATGTTGTCTCGGATGGTGGCAAACTGGATCCAGGGTTCCTGGGTaGCCAGGCCAAAGCCCTTGGACAGCCCCCGCACTGCCACATGCC +
Preference number: 5 (lower is better)
Translates to: GCCLGWWQTGSRVPG*PGQSPWTAPALPHA
Trigger: GGCATGTGGCAGTGCGGGGGCTGTCCAAGGGCTTTGGCCTGGCCACCCAGGAACCCTGGATCCAGTTTGCCACCATCCGAGACAACATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS-3UTR CAA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGCTGCAGGGTGTGGGATaGGGCTCAGGGACCTCCGAG +
Preference number: 5 (lower is better)
Translates to: QHLCIGPAWIRERGELCRLQGVG*GSGTSE
Trigger: CTCGGAGGTCCCTGAGCCCAATCCCACACCCTGCAG...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS TCA 90 bp CTGGTGGAGGGTTGCGCCTCCTGGGAGCTATTCTCAGCCTTCAGCTaGGAGATCCAGTGGGAGAGCCACCAGTCAGCAGCGTTCCGCGTG +
Preference number: 5 (lower is better)
Translates to: LVEGCASWELFSAFS*EIQWESHQSAAFRV
Trigger: CACGCGGAACGCTGCTGACTGGTGGCTCTCCCACTGGATCTCTCAGCTGAAGGCTGAGAATAGCTCCCAGGAGGCGCAACCCTCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 90 bp AAGACAGCGACAAGCCCACCAGCCCTGGGGGAGAGAAGTACCAGCTaGTGGGAGAGCTTGGACACCGGGACGTTTGTGGGAGACTCCCCA +
Preference number: 5 (lower is better)
Translates to: KTATSPPALGERSTS*WESLDTGTFVGDSP
Trigger: TGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGGCTGGTGGGCTTGTCGCTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS-3UTR CAA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCGCCGCATCCAGGTATTaGATGACCCGGAGTCGCCCC +
Preference number: 5 (lower is better)
Translates to: SSQHLCIGPAWIRERGELAASRY*MTRSRP
Trigger: GGGGCGACTCCGGGTCATCAAATACCTGGATGCGGC...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGCAGGCCTGCCGCGTaGGCCAGGAGGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VNKQPAPLYRPGLDQREGSRPAA*ARRMLR
Trigger: CCTCAACATCCTCCTGGCCAACGCGGCAGGCCTGCT...CCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTTGTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCAACAACAGGGAAGACTaGCCGGAGCCTGTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: SSQHLCIGPAWIRERGELNNRED*PEPVRP
Trigger: GGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTGTT...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp AAGAGGATGTTGTCTCGGATGGTGGCAAACTGGATCCAGGGTTCCTaGGTGGCCAGGCCAAAGCCCTTGGACAGCCCCCGCACTGCCACA +
Preference number: 5 (lower is better)
Translates to: KRMLSRMVANWIQGS*VARPKPLDSPRTAT
Trigger: TGTGGCAGTGCGGGGGCTGTCCAAGGGCTTTGGCCTGGCCACCCAGGAACCCTGGATCCAGTTTGCCACCATCCGAGACAACATCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS-3UTR CAA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGACTGCAGGGTGTGGGATaGGGCTCAGGGACCTCCGAG +
Preference number: 5 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARLQGVG*GSGTSE
Trigger: CTCGGAGGTCCCTGAGCCCAATCCCACACCCTGCAG...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS CCA 90 bp AGCCCACCAGTAGGGAGAGCAACAGGGGCCCTGAGAATCCCAACATaGTCCCCACCAGCTTCAGCAGTCCAAGTGCCAGATAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: SPPVGRATGALRIPT*SPPASAVQVPDSTV
Trigger: GACGGTGCTATCTGGCACTTGGACTGCTGAAGCTGGTGGGGACCATGTTGGGATTCTCAGGGCCCCTGTTGCTCTCCCTACTGGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCGTGGCAATCACTTTGTaGACGGGTACCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPVAITL*TGTSSS
Trigger: ACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCAC...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCGGGTGGCAATCACTTaGTTGACGGGTACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLRVAIT*LTGTSS
Trigger: GCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCG...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGACGGTCCAAGGACACTTaGGCCTCCAGGAGACCATTG +
Preference number: 5 (lower is better)
Translates to: VPDARGPEQRPGSGEASGRSKDT*ASRRPL
Trigger: CAATGGTCTCCTGGAGGCCAAAGTGTCCTTGGACCG...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTACGGCGCCCTCCTTCTaGCTTTCTTCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTTAPSF*LSSCSR
Trigger: CCTGCTGCAGGAAGAAAGCAAGAAGGAGGGCGCCGT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGATGTCTGAGGAGCCATaGGGGGCAGCTTTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: LCIGPAWIRERGELCRVWMSEEP*GAALGS
Trigger: ACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACAT...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGACAGAGTGGCAGCTGCTaGAAGGGTGCCTGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: VPDARGPEQRPGSGEASGQSGSC*KGACCK
Trigger: TTTGCAGCAGGCACCCTTCAAGCAGCTGCCACTCTG...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCGTGGGTGTGGCATaGAAGAAAGTCACTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLPVGVA*KKVTGA
Trigger: GGCACCAGTGACTTTCTTCAATGCCACACCCACGGG...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCCCCGTGGGTGTGGCATaGAAGAAAGTCACTGGTGCC +
Preference number: 5 (lower is better)
Translates to: SSQHLCIGPAWIRERGELPVGVA*KKVTGA
Trigger: GGCACCAGTGACTTTCTTCAATGCCACACCCACGGG...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGCCCTTGTTGGCAAAGCGTTaGCAGATGGTCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CKRARAEAWFWGSLRMLPLLAKR*QMVCWS
Trigger: GCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAA...GGGCAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS TCA 90 bp TCTCCCAGTTCCTCACACCAGTTCTGTGAAGGCGGGAGGCAGCAATaGCTGGCTCAGGGCACACATGCAGCAGGGGGCAGAGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: SPSSSHQFCEGGRQQ*LAQGTHAAGGRVCT
Trigger: AGTACAGACTCTGCCCCCTGCTGCATGTGTGCCCTGAGCCAGTCATTGCTGCCTCCCGCCTTCACAGAACTGGTGTGAGGAACTGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS GCA 90 bp CGGAAAGCAGGAAGGAAGCTGCAAGTCGGAGGCGCCATCCAGGACTaGAGGGTAGGATGTAATCTGGACTCCTGGGGACAAGGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: RKAGRKLQVGGAIQD*RVGCNLDSWGQGGR
Trigger: TCTTCCCCCTTGTCCCCAGGAGTCCAGATTACATCCTACCCTGCAGTCCTGGATGGCGCCTCCGACTTGCAGCTTCCTTCCTGCTTTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS GCA 90 bp CTGACCACTGCCGCCCCCATGAGCTGTAGCCGAATGTCCAGCCACTaGATTGTGGCACTGGTGGCAAACTGGCACCTCTGGTTTAGCTCA +
Preference number: 5 (lower is better)
Translates to: LTTAAPMSCSRMSSH*IVALVANWHLWFSS
Trigger: TGAGCTAAACCAGAGGTGCCAGTTTGCCACCAGTGCCACAATGCAGTGGCTGGACATTCGGCTACAGCTCATGGGGGCGGCAGTGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 90 bp CCATCCAGACCACCCATGGATGTAATCACCTCACTCAGGTGGCACTaGTTCAGGGCCTGCCACAAGGCCCTGTCCTTATGTAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PSRPPMDVITSLRWH*FRACHKALSLCRPW
Trigger: CCAGGGCCTACATAAGGACAGGGCCTTGTGGCAGGCCCTGAAGCAGTGCCACCTGAGTGAGGTGATTACATCCATGGGTGGTCTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 90 bp CGGAAAGCAGGAAGGAAGCTGCAAGTCGGAGGCGCCATCCAGGACTaGAGGGTAGGATGTAATCTGGACTCCTCGGGGTGCCCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: RKAGRKLQVGGAIQD*RVGCNLDSSGCPSN
Trigger: GTTACTTGGGCACCCCGAGGAGTCCAGATTACATCCTACCCTGCAGTCCTGGATGGCGCCTCCGACTTGCAGCTTCCTTCCTGCTTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS-3UTR CAA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAAGCCACCTCAGGTTCTaGATCCTCGGGCAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRSHLRF*ILGQEG
Trigger: CCCCTCCTGCCCGAGGATCAAGAACCTGAGGTGGCT...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGAGGGTGATGGCCAGTaGCAGGGGCAGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: DFQRVIQGALFPSGEVWREGDGQ*QGQAPG
Trigger: GCCTGGGGCCTGCCCCTGCAACTGGCCATCACCCTC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGCCAGGCCAAAGCCCTaGGACAGCCCCCGCACTGCC +
Preference number: 5 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRARPKP*DSPRTA
Trigger: GGCAGTGCGGGGGCTGTCCAAGGGCTTTGGCCTGGC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTATGTCTGAGGAGCCATaGGGGGCAGCTTTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTMSEEP*GAALGS
Trigger: ACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACAT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGTCCAGCCACTGCATaGTGGCACTGGTGGCAAACT +
Preference number: 5 (lower is better)
Translates to: VPDARGPEQRPGSGEASGCPATA*WHWWQT
Trigger: AGTTTGCCACCAGTGCCACAATGCAGTGGCTGGACA...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp CAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGTGTCCAGCCACTGCATaGTGGCACTGGTGGCAAACT +
Preference number: 5 (lower is better)
Translates to: QHLCIGPAWIRERGELCRCPATA*WHWWQT
Trigger: AGTTTGCCACCAGTGCCACAATGCAGTGGCTGGACA...CCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS TCA 90 bp TTCCCCTCCCGTTTCTCCGCCCCCAGGCATCCGGAACCTCAAACCTaGAGAAGCTGCTGTGCACCGGATTCCGATATCCTGAGAACTGGT +
Preference number: 5 (lower is better)
Translates to: FPSRFSAPRHPEPQT*RSCCAPDSDILRTG
Trigger: ACCAGTTCTCAGGATATCGGAATCCGGTGCACAGCAGCTTCTTCAGGTTTGAGGTTCCGGATGCCTGGGGGCGGAGAAACGGGAGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS GCA 90 bp CATGATGCGGGTGGCAATCACTTTGTTGACGGGTACCAGCAGCAGTaGCAAGATGAGACCACCCACGAAGGCCACGCCTACCTGCTGGTA +
Preference number: 5 (lower is better)
Translates to: HDAGGNHFVDGYQQQ*QDETTHEGHAYLLV
Trigger: TACCAGCAGGTAGGCGTGGCCTTCGTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCGCATCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 90 bp ATGCAGAGTGGCAGCTGCTTGAAGGGTGCCTGCTGCAAAGAGCACTaGCCGGAGAAGGGTGCAGAGGGAATTTACACCAGCAATGGTCGC +
Preference number: 5 (lower is better)
Translates to: MQSGSCLKGACCKEH*PEKGAEGIYTSNGR
Trigger: GCGACCATTGCTGGTGTAAATTCCCTCTGCACCCTTCTCCGGGCAGTGCTCTTTGCAGCAGGCACCCTTCAAGCAGCTGCCACTCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372512.2
ENST00000372530.9
ENST00000463024.1
CDS GCA 90 bp CATGATGCGGGTGGCAATCACTTTGTTGACGGGTACCAGCAGCAGTaGCAAGATGAGACCACCCACGAAGGCCACGCCTACCTCTCACGT +
Preference number: 5 (lower is better)
Translates to: HDAGGNHFVDGYQQQ*QDETTHEGHAYLSR
Trigger: ACGTGAGAGGTAGGCGTGGCCTTCGTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCGCATCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372515.8
CDS GCA 90 bp CATGATGCGGGTGGCAATCACTTTGTTGACGGGTACCAGCAGCAGTaGCAAGATGAGACCACCCACGAAGGCCACGCCTACCTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: HDAGGNHFVDGYQQQ*QDETTHEGHAYLKG
Trigger: TCCCTTCAGGTAGGCGTGGCCTTCGTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCGCATCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443426.2
CDS CCA 90 bp GGGCTGTGGCTGAGTCAGACTCTTGTCCATTCTCAGCCCAGGCTTTaGGGACAGCTTGTACCAGTGGCAGAATCTCAGAGGGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GLWLSQTLVHSQPRL*GQLVPVAESQREVQ
Trigger: CTGGACCTCCCTCTGAGATTCTGCCACTGGTACAAGCTGTCCCCAAAGCCTGGGCTGAGAATGGACAAGAGTCTGACTCAGCCACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 90 bp GGGCTGTGGCTGAGTCAGACTCTTGTCCATTCTCAGCCCAGGCTTTaGGGACAGCTTGTACCAGTGGCAGAATCTCAGAGGGAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GLWLSQTLVHSQPRL*GQLVPVAESQREVL
Trigger: CAGGACCTCCCTCTGAGATTCTGCCACTGGTACAAGCTGTCCCCAAAGCCTGGGCTGAGAATGGACAAGAGTCTGACTCAGCCACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS-3UTR CAA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGCACGAGCCAGGTAGGTaGGCTGCAGTCTGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEHEPGR*AAVCGG
Trigger: TCCCCCACAGACTGCAGCCAACCTACCTGGCTCGTG...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTTAACCCGCGCATCCTaGTGCTGTAGCATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LCIGPAWIRERGELCRVWLTRAS*CCSISW
Trigger: CCAGGAAATGCTACAGCACAAGGATGCGCGGGTTAA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATTAACCCGCGCATCCTaGTGCTGTAGCATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VPDARGPEQRPGSGEASGLTRAS*CCSISW
Trigger: CCAGGAAATGCTACAGCACAAGGATGCGCGGGTTAA...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGATCCCACCCGCAGAACTaGATGACCCGAATGCCACTC +
Preference number: 5 (lower is better)
Translates to: WAPMPEKPTWRSRCKRARSHPQN*MTRMPL
Trigger: GAGTGGCATTCGGGTCATCAAGTTCTGCGGGTGGGA...TCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGAGGGCCGTGAACACCTaGGTGGCAGTGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: MQVGSYARKTHLAFQMQERAVNT*VAVSWC
Trigger: GCACCAGCTCACTGCCACCAAGGTGTTCACGGCCCT...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AAGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTAGCGTTCCGCGTGGCTaGCATGAGAAGCAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: KQPAPLYRPGLDQREGRTSVPRG*HEKQRE
Trigger: TTCTCTCTGCTTCTCATGCAAGCCACGCGGAACGCT...AGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTCGATACACAGGATCTaGGCATCTGTGAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LCIGPAWIRERGELCRVWSIHRI*ASVRRA
Trigger: GGCTCTCCTCACAGATGCCAAGATCCTGTGTATCGA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTCGATACACAGGATCTaGGCATCTGTGAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSQHLCIGPAWIRERGELSIHRI*ASVRRA
Trigger: GGCTCTCCTCACAGATGCCAAGATCCTGTGTATCGA...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp CTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTGCAGGGTGTGGTCTTCTGGTCCACACTaGCTGTGGCCTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: LCIGPAWIRERGELCRVWSSGPH*LWPHRY
Trigger: GTATCGATGAGGCCACAGCAAGTGTGGACCAGAAGA...CCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGTTGTTGGCAAAGCGTTaGCAGATGGTCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLLLAKR*QMVCWS
Trigger: GCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAA...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATCTGCAGGGTGTGGGATaGGGCTCAGGGACCTCCGAG +
Preference number: 5 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYLQGVG*GSGTSE
Trigger: CTCGGAGGTCCCTGAGCCCAATCCCACACCCTGCAG...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS CCA 90 bp AGCTCACCATCCAGACCACCCATGGATGTAATCACCTCACTCAGGTaGCACTGCTTCAGGGCCTGCCACAAGGCCCTGTCCTTATGTAGG +
Preference number: 5 (lower is better)
Translates to: SSPSRPPMDVITSLR*HCFRACHKALSLCR
Trigger: CCTACATAAGGACAGGGCCTTGTGGCAGGCCCTGAAGCAGTGCCACCTGAGTGAGGTGATTACATCCATGGGTGGTCTGGATGGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 90 bp AGAGAAGTACCAGCTGCTGGGAGAGCTTGGACACCGGGACGTTTGTaGGAGACTCCCCAGGCTGTGGACTGCTGGCATTTAAAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: REVPAAGRAWTPGRL*ETPQAVDCWHLKEA
Trigger: TGCTTCCTTTAAATGCCAGCAGTCCACAGCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS-3UTR CAA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTAGCCACCTCAGGTTCTaGATCCTCGGGCAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGSHLRF*ILGQEG
Trigger: CCCCTCCTGCCCGAGGATCAAGAACCTGAGGTGGCT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGGGCCGTGAACACCTaGGTGGCAGTGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: ENASGLLCQKNPPGVPDARAVNT*VAVSWC
Trigger: GCACCAGCTCACTGCCACCAAGGTGTTCACGGCCCT...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTAACAACAGGGAAGACTaGCCGGAGCCTGTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGNNRED*PEPVRP
Trigger: GGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTGTT...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp CTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGCATGGACGCCTCACCTaGCCATCTGTTTTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: LLCQKNPPGVPDARGPEQHGRLT*PSVFPL
Trigger: GAGGGGAAAAACAGATGGCAAGGTGAGGCGTCCATG...CTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS TCA 90 bp TACACCAGCAATGGTCGCATACACGGTGAGGTAGAAACGGATGTCTaGGGAGCCATTGGGGGCAGCTTTGGGCAGTGGGAACACTGGGAT +
Preference number: 5 (lower is better)
Translates to: YTSNGRIHGEVETDV*GAIGGSFGQWEHWD
Trigger: ATCCCAGTGTTCCCACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACATCCGTTTCTACCTCACCGTGTATGCGACCATTGCTGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372512.2
ENST00000372530.9
ENST00000463024.1
CDS GCA 90 bp GCAGAGAGGGACGAATGTCCATCCCCAAGAGGACCGCCAGAGCTATaGCTGCCACTCTGTCCAGGGTTACTTCTCATTACTGCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: AERDECPSPRGPPEL*LPLCPGLLLITAEL
Trigger: AAGCTCTGCAGTAATGAGAAGTAACCCTGGACAGAGTGGCAGGCATAGCTCTGGCGGTCCTCTTGGGGATGGACATTCGTCCCTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 90 bp TGTAGCCGAATGTCCAGCCACTGCATTGTGGCACTGGTGGCAAACTaGCACCTCTGGTTTAGCTCAAGGAGTCGCAGGTTCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: CSRMSSHCIVALVAN*HLWFSSRSRRFSSS
Trigger: TGAGGAGGAGAACCTGCGACTCCTTGAGCTAAACCAGAGGTGCCAGTTTGCCACCAGTGCCACAATGCAGTGGCTGGACATTCGGCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS-3UTR CAA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGACACGAGCCAGGTAGGTaGGCTGCAGTCTGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRHEPGR*AAVCGG
Trigger: TCCCCCACAGACTGCAGCCAACCTACCTGGCTCGTG...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGCCGCATCCAGGTATTaGATGACCCGGAGTCGCCCC +
Preference number: 5 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRAASRY*MTRSRP
Trigger: GGGGCGACTCCGGGTCATCAAATACCTGGATGCGGC...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGCAGCCAGCACCTCTGTATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCATCACCCAAGGGAAGTaGTTGAGAGGAAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: SSQHLCIGPAWIRERGELITQGK*LRGRMS
Trigger: GCTCATTCTTCCTCTCAACAACTTCCCTTGGGTGAT...GAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTATACAGAGGTGCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGCCTCCAGGAGACCATaGATCACCCAAGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRASRRP*ITQGKL
Trigger: CAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGATGCTGGCTTCTAGCACCTCCTaGTACAGCTGTGCATCAAAT +
Preference number: 5 (lower is better)
Translates to: RCKRARAEAWFWGSLRMLASSTS*YSCASN
Trigger: ATTTGATGCACAGCTGTACAAGGAGGTGCTAGAAGC...CAGCATCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATTGTTGGCAAAGCGTTaGCAGATGGTCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPLLAKR*QMVCWS
Trigger: GCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGTTCAGGATCGTGTaGAGCCTATGGGCAATGGTC +
Preference number: 5 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPEFRIV*SLWAMV
Trigger: GACCATTGCCCATAGGCTCAACACGATCCTGAACTC...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS TCA 90 bp GAAGGGTGCAGAGGGAATTTACACCAGCAATGGTCGCATACACGGTaGGGTAGAAACGGATGTCTGAGGAGCCATTGGGGGCAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: EGCRGNLHQQWSHTR*GRNGCLRSHWGQLW
Trigger: CCAAAGCTGCCCCCAATGGCTCCTCAGACATCCGTTTCTACCTCACCGTGTATGCGACCATTGCTGGTGTAAATTCCCTCTGCACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372512.2
ENST00000372530.9
ENST00000463024.1
CDS-3UTR CAA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTTCCCACCCGCAGAACTaGATGACCCGAATGCCACTC +
Preference number: 5 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGSHPQN*MTRMPL
Trigger: GAGTGGCATTCGGGTCATCAAGTTCTGCGGGTGGGA...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGCCTCCAGGAGACCATaGATCACCCAAGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEASRRP*ITQGKL
Trigger: CAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GTTCCAGATGCAAGAGGGCCAGAGCAGAGGCCTGGTTCTGGGGAAGCCTCAGGAGAACAGAGAAGCCACTaGATTTGGGCTCCTAATCTA +
Preference number: 5 (lower is better)
Translates to: VPDARGPEQRPGSGEASGEQRSH*IWAPNL
Trigger: TAGATTAGGAGCCCAAATCAAGTGGCTTCTCTGTTC...TCCTGAGGCTTCCCCAGAACCAGGCCTCTGCTCTGGCCCTCTTGCATCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS-3UTR CAA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCATTCCCAAAGAGGATGTaGTCTCGGATGGTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPFPKRM*SRMVAN
Trigger: GTTTGCCACCATCCGAGACAACATCCTCTTTGGGAA...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATCTGTGCAGCAGGTGGTaGGCCACATCTGCATCCACA +
Preference number: 5 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYLCSRW*ATSAST
Trigger: TGTGGATGCAGATGTGGCCAACCACCTGCTGCACAG...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGCTGTGCAGCAGGTGGTaGGCCACATCTGCATCCACA +
Preference number: 5 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKLCSRW*ATSAST
Trigger: TGTGGATGCAGATGTGGCCAACCACCTGCTGCACAG...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGACGGCGCCCTCCTTCTaGCTTTCTTCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWTAPSF*LSSCSR
Trigger: CCTGCTGCAGGAAGAAAGCAAGAAGGAGGGCGCCGT...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAGGCCTTCCAGTAAGCTaGGTACACGTGCAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: ENASGLLCQKNPPGVPDAGLPVS*VHVQGH
Trigger: GTGGCCTTGCACGTGTACCAAGCTTACTGGAAGGCC...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATGGCCTTCCAGTAAGCTaGGTACACGTGCAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYGLPVS*VHVQGH
Trigger: GTGGCCTTGCACGTGTACCAAGCTTACTGGAAGGCC...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTCAGAGTGGCAGCTGCTaGAAGGGTGCCTGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGQSGSC*KGACCK
Trigger: TTTGCAGCAGGCACCCTTCAAGCAGCTGCCACTCTG...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGAGTTCAGGATCGTGTaGAGCCTATGGGCAATGGTC +
Preference number: 5 (lower is better)
Translates to: SYARKTHLAFQMQEGQSREFRIV*SLWAMV
Trigger: GACCATTGCCCATAGGCTCAACACGATCCTGAACTC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS GCA 90 bp AGAGGGACGAATGTCCATCCCCAAGAGGACCGCCAGAGCTATGCCTaGCACTCTGTCCAGGGTTACTTCTCATTACTGCAGAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RGTNVHPQEDRQSYA*HSVQGYFSLLQSFF
Trigger: GAAAAAGCTCTGCAGTAATGAGAAGTAACCCTGGACAGAGTGGCAGGCATAGCTCTGGCGGTCCTCTTGGGGATGGACATTCGTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 90 bp TCTGTCACAAGCTTAACCCGCGCATCCTTGTGCTGTAGCATTTCCTaGTTGCTGGCCATGATGCGGGTGGCAATCACTTTGTTGACGGGT +
Preference number: 5 (lower is better)
Translates to: SVTSLTRASLCCSIS*LLAMMRVAITLLTG
Trigger: ACCCGTCAACAAAGTGATTGCCACCCGCATCATGGCCAGCAACCAGGAAATGCTACAGCACAAGGATGCGCGGGTTAAGCTTGTGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CCA 90 bp ACTGTCTTGTTGGCAAAGCGTTTGCAGATGGTCTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACACTTGCTGTGGCCTCATCGATACAC +
Preference number: 5 (lower is better)
Translates to: TVLLAKRLQMVCWSS*SVFWSTLAVASSIH
Trigger: GTGTATCGATGAGGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAAGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CCA 90 bp GTGGCAGAATCTCAGAGGGAGGTCCTGGAGGGTAGAAGGGGAGATTaGGAGAGGACTGTTCTGAGTCTATACTATGCCTTTCTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: VAESQREVLEGRRGD*ERTVLSLYYAFLSA
Trigger: CGCACTGAGAAAGGCATAGTATAGACTCAGAACAGTCCTCTCCCAATCTCCCCTTCTACCCTCCAGGACCTCCCTCTGAGATTCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS-3UTR CAA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGCGGGTGGCAATCACTTaGTTGACGGGTACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWRVAIT*LTGTSS
Trigger: GCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCG...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAATCACCCAAGGGAAGTaGTTGAGAGGAAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: SGLLCQKNPPGVPDARGPITQGK*LRGRMS
Trigger: GCTCATTCTTCCTCTCAACAACTTCCCTTGGGTGAT...TGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGACGGTCCAAGGACACTTaGGCCTCCAGGAGACCATTG +
Preference number: 5 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRRSKDT*ASRRPL
Trigger: CAATGGTCTCCTGGAGGCCAAAGTGTCCTTGGACCG...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATCCTGGGGGTTGTGGTTaGGAAGGTCGAGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYPGGCG*EGRGKA
Trigger: AGCTTTTCCTCGACCTTCCAAACCACAACCCCCAGG...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGATTCCCAAAGAGGATGTaGTCTCGGATGGTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRFPKRM*SRMVAN
Trigger: GTTTGCCACCATCCGAGACAACATCCTCTTTGGGAA...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGCGTTCCGCGTGGCTaGCATGAGAAGCAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: KCKWAPMPEKPTWRSRCKSVPRG*HEKQRE
Trigger: TTCTCTCTGCTTCTCATGCAAGCCACGCGGAACGCT...CTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCGTCAGCACTGTCTTGTaGGCAAAGCGTTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPVSTVL*AKRLQM
Trigger: CATCTGCAAACGCTTTGCCAACAAGACAGTGCTGAC...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp GGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATAGGCCCATGGTCAGCACTGTCTaGTTGGCAAAGCGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: GRAPEENVNKQPAPLYRPMVSTV*LAKRLQ
Trigger: CTGCAAACGCTTTGCCAACAAGACAGTGCTGACCAT...GGGCCTATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGAGTTCAGGATCGTGTaGAGCCTATGGGCAATGGTC +
Preference number: 5 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEEFRIV*SLWAMV
Trigger: GACCATTGCCCATAGGCTCAACACGATCCTGAACTC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp TGGAGAGGTAGAGCCCCAGAGGAGAATGTAAACAAGCAGCCAGCACCTCTGTATGTGGCAATCACTTTGTaGACGGGTACCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: WRGRAPEENVNKQPAPLYVAITL*TGTSSS
Trigger: ACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCAC...ATACAGAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGCCTGGGGGTTGTGGTTaGGAAGGTCGAGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWPGGCG*EGRGKA
Trigger: AGCTTTTCCTCGACCTTCCAAACCACAACCCCCAGG...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp TCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGGCCAGAGCAGAGCTTCTAGCACCTCCTaGTACAGCTGTGCATCAAAT +
Preference number: 5 (lower is better)
Translates to: SYARKTHLAFQMQEGQSRASSTS*YSCASN
Trigger: ATTTGATGCACAGCTGTACAAGGAGGTGCTAGAAGC...TCTGCTCTGGCCCTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp GAAAATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCATCTTCTGGTCCACACTaGCTGTGGCCTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: ENASGLLCQKNPPGVPDASSGPH*LWPHRY
Trigger: GTATCGATGAGGCCACAGCAAGTGTGGACCAGAAGA...TGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp ATGCAAGTGGGCTCCTATGCCAGAAAAACCCACCTGGCGTTCCAGATGCAAGAGGTCAGCACTGTCTTGTaGGCAAAGCGTTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: MQVGSYARKTHLAFQMQEVSTVL*AKRLQM
Trigger: CATCTGCAAACGCTTTGCCAACAAGACAGTGCTGAC...CTCTTGCATCTGGAACGCCAGGTGGGTTTTTCTGGCATAGGAGCCCACTTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS TCA 90 bp GAGCTCAGTGGAGAGTATGGCCACCACATTGTACTTGTTCCCATCTaGAAACAAGGTCCTCCCTCAAACCTATGCTCCTCTCTGGATCCC +
Preference number: 5 (lower is better)
Translates to: ELSGEYGHHIVLVPI*KQGPPSNLCSSLDP
Trigger: GGGATCCAGAGAGGAGCATAGGTTTGAGGGAGGACCTTGTTTTCAGATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS-3UTR CAA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGACCCAGCTGTAAAGCCTaGCAGTACAGGATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRPSCKA*QYRMFS
Trigger: GCTGAACATCCTGTACTGCAAGGCTTTACAGCTGGG...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS-3UTR CAA 90 bp AGTGATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGTCTTCTGGTCCACACTaGCTGTGGCCTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: SDFQRVIQGALFPSGEVWSSGPH*LWPHRY
Trigger: GTATCGATGAGGCCACAGCAAGTGTGGACCAGAAGA...CCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp TTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAGGTGTCAGCACTGTCTTGTaGGCAAAGCGTTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: FQRVIQGALFPSGEVWRGVSTVL*AKRLQM
Trigger: CATCTGCAAACGCTTTGCCAACAAGACAGTGCTGAC...ACCTCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS-3UTR CAA 90 bp GATTTCCAAAGAGTAATCCAGGGTGCCCTTTTCCCTTCTGGGGAAGTGTGGAGAATGGTCAGCACTGTCTaGTTGGCAAAGCGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: DFQRVIQGALFPSGEVWRMVSTV*LAKRLQ
Trigger: CTGCAAACGCTTTGCCAACAAGACAGTGCTGACCAT...TCTCCACACTTCCCCAGAAGGGAAAAGGGCACCCTGGATTACTCTTTGGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000505344.1
CDS CCA 90 bp TTCCCAAGAGCACCCAGTCACAAAGCCCATGAGTCCCAAATACACTaGCATTTTACCAACGTACTCCTTTTCCCTCCTGTTCTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: FPRAPSHKAHESQIH*HFTNVLLFPPVLPV
Trigger: AACTGGGAGAACAGGAGGGAAAAGGAGTACGTTGGTAAAATGCCAGTGTATTTGGGACTCATGGGCTTTGTGACTGGGTGCTCTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 90 bp AGCAGCTGTTGTACTTACATCTGTTCAGGAGCTCAGTGGAGAGTATaGCCACCACATTGTACTTGTTCCCATCTGAAAACAAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSCCTYICSGAQWRV*PPHCTCSHLKTRSS
Trigger: GGAGGACCTTGTTTTCAGATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTCCTGAACAGATGTAAGTACAACAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 90 bp CCTAATGAAGCCCATTCTGGGCGAAGAAGGGAAGAAATAGCTCTTTaGCTACAGCCAAGCAGCTGTTGTACTTACATCTGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PNEAHSGRRREEIAL*LQPSSCCTYICSGA
Trigger: AGCTCCTGAACAGATGTAAGTACAACAGCTGCTTGGCTGTAGCCAAAGAGCTATTTCTTCCCTTCTTCGCCCAGAATGGGCTTCATTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS GCA 90 bp CCTCCAATAATTCACTTACCTAAGGAATCAACTCCCTTCCTGCCTTaGACATCTTATCCCTACTCCACTTTACCTCAGAACCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PPIIHLPKESTPFLP*TSYPYSTLPQNPGS
Trigger: AGACCCTGGGTTCTGAGGTAAAGTGGAGTAGGGATAAGATGTGCAAGGCAGGAAGGGAGTTGATTCCTTAGGTAAGTGAATTATTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS CCA 90 bp CTACAGCCAAGCAGCTGTTGTACTTACATCTGTTCAGGAGCTCAGTaGAGAGTATGGCCACCACATTGTACTTGTTCCCATCTGAAAACA +
Preference number: 5 (lower is better)
Translates to: LQPSSCCTYICSGAQ*RVWPPHCTCSHLKT
Trigger: TGTTTTCAGATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTCCTGAACAGATGTAAGTACAACAGCTGCTTGGCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS GCA 90 bp CACTCTGTCCAGGGTTACTTCTCATTACTGCAGAGCTTTTTCTCATaGTTCGCTCAATTCCTAATATCTGGCTGGAGCTTCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: HSVQGYFSLLQSFFS*FAQFLISGWSFISS
Trigger: GGAGGAAATGAAGCTCCAGCCAGATATTAGGAATTGAGCGAAGCATGAGAAAAAGCTCTGCAGTAATGAGAAGTAACCCTGGACAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS TCA 90 bp AAAAAGACCATTCTAAACCTGACTCCTTTCTCTTCTCTGAAGATATaGGAATGTTCTCAGAGACCCTGGGCCTTTAAGTTCCCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: KKTILNLTPFSSLKI*ECSQRPWAFKFPRA
Trigger: TGCTCTTGGGAACTTAAAGGCCCAGGGTCTCTGAGAACATTCTCATATCTTCAGAGAAGAGAAAGGAGTCAGGTTTAGAATGGTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 90 bp GCATTTAAAACACTCTGGTGTAATGATTACAATGATTCGCTTTCTTaGCCACCTCCTTCTTTCCAGATTGAAAACTCTCCCAATAAAGGG +
Preference number: 5 (lower is better)
Translates to: AFKTLWCNDYNDSLS*PPPSFQIENSPNKG
Trigger: CCCTTTATTGGGAGAGTTTTCAATCTGGAAAGAAGGAGGTGGCCAAGAAAGCGAATCATTGTAATCATTACACCAGAGTGTTTTAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS GCA 72 bp CCCCCTCCCACAGCGGGAGCGGCCACGCTGCGCTGCTaGCGCACAGCTGGGCCAGAAGTCGTTCCATGGACG +
Preference number: 6 (lower is better)
Translates to: PPPTAGAATLRC*RTAGPEVVPWT
Trigger: CGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372530.9
ENST00000502549.1
CDS TCA 72 bp CTCACACGGGGCTCCTGCCCCCATTACCAGCCCGGATaGGGCGCCCGGCCTCCATCAGCAGCACCGCGTCAG +
Preference number: 6 (lower is better)
Translates to: LTRGSCPHYQPG*GARPPSAAPRQ
Trigger: CTGACGCGGTGCTGCTGATGGAGGCCGGGCGCCTCATCCGGGCTGGTAATGGGGGCAGGAGCCCCGTGTGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS GCA 72 bp TGTCCCCCTCCCACAGCGGGAGCGGCCACGCTGCGCTaGTGCCGCACAGCTGGGCCAGAAGTCGTTCCATGG +
Preference number: 6 (lower is better)
Translates to: CPPPTAGAATLR*CRTAGPEVVPW
Trigger: CCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGGGGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372530.9
ENST00000502549.1
CDS GCA 72 bp TGTGGTGTCCCCCTCCCACAGCGGGAGCGGCCACGCTaGGCTGCTGCCGCACAGCTGGGCCAGAAGTCGTTC +
Preference number: 6 (lower is better)
Translates to: CGVPLPQRERPR*AAAAQLGQKSF
Trigger: GAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCTGTGGGAGGGGGACACCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372530.9
ENST00000502549.1
CDS TCA 72 bp GTTGGCTGCAGTCTGTGGGGGAGGCGGCAAATGTCCTaGGGCTGCCGGAGCTCTCCACAGGCCCCACGGGCC +
Preference number: 6 (lower is better)
Translates to: VGCSLWGRRQMS*GCRSSPQAPRA
Trigger: GGCCCGTGGGGCCTGTGGAGAGCTCCGGCAGCCTCAGGACATTTGCCGCCTCCCCCACAGACTGCAGCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 72 bp GGTGGCCAGGCCAAAGCCCTTGGACAGCCCCCGCACTaGCACATGCCCACGCAGCCTGTGGAGCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GGQAKALGQPPH*HMPTQPVELSS
Trigger: GCTGGAGAGCTCCACAGGCTGCGTGGGCATGTGGCAGTGCGGGGGCTGTCCAAGGGCTTTGGCCTGGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS CCA 72 bp CTCGGGCAGGAGGGGCTCCTGAGCCCAGGGTTCTCGTaGTCCCCCAGGAGCTGCCCATCCCAGTGCATAGGC +
Preference number: 6 (lower is better)
Translates to: LGQEGLLSPGFS*SPRSCPSQCIG
Trigger: GCCTATGCACTGGGATGGGCAGCTCCTGGGGGACCACGAGAACCCTGGGCTCAGGAGCCCCTCCTGCCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 72 bp AGCGGGAGCGGCCACGCTGCGCTGCTGCCGCACAGCTaGGCCAGAAGTCGTTCCATGGACGCCTCACCTTGC +
Preference number: 6 (lower is better)
Translates to: SGSGHAALLPHS*ARSRSMDASPC
Trigger: GCAAGGTGAGGCGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS CCA 72 bp AGCGGGAGCGGCCACGCTGCGCTGCTGCCGCACAGCTaGGCCAGAAGTCGTTCCATGGACGCCTCACCTGAA +
Preference number: 6 (lower is better)
Translates to: SGSGHAALLPHS*ARSRSMDASPE
Trigger: TTCAGGTGAGGCGTCCATGGAACGACTTCTGGCCCAGCTGTGCGGCAGCAGCGCAGCGTGGCCGCTCCCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502549.1
CDS GCA 72 bp GGCCAAGGGACCCCGGGAGTGGCCATGAGGGGAATGTaGCAACACCCACAGGGCCAGGCTGTGGCTGATCCA +
Preference number: 6 (lower is better)
Translates to: GQGTPGVAMRGM*QHPQGQAVADP
Trigger: TGGATCAGCCACAGCCTGGCCCTGTGGGTGTTGGCACATTCCCCTCATGGCCACTCCCGGGGTCCCTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 72 bp CCGTCCAAAGGCCCCATACAAGGCCCTCCACAGCCGTaGCCCCTCCTGCCAGTGTGCCTGGAAGACACGAGC +
Preference number: 6 (lower is better)
Translates to: PSKGPIQGPPQP*PLLPVCLEDTS
Trigger: GCTCGTGTCTTCCAGGCACACTGGCAGGAGGGGGCACGGCTGTGGAGGGCCTTGTATGGGGCCTTTGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 72 bp CGAGCCCGGCAGGCCTCTACTCGGGCTCCCAGTGCCTaGTCCCACCCGCAGAACTTGATGACCCGAATGCCA +
Preference number: 6 (lower is better)
Translates to: RARQASTRAPSA*SHPQNLMTRMP
Trigger: TGGCATTCGGGTCATCAAGTTCTGCGGGTGGGAGCAGGCACTGGGAGCCCGAGTAGAGGCCTGCCGGGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS GCA 72 bp CCCACCAGCCCTGGGTTAGCGAGGCCCTGCTGGTGCTaGACCAGAGCGATGCCTGCGATAGCGCTGACCACT +
Preference number: 6 (lower is better)
Translates to: PTSPGLARPCWC*TRAMPAIALTT
Trigger: AGTGGTCAGCGCTATCGCAGGCATCGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAACCCAGGGCTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 72 bp AAGCCCACCAGCCCTGGGTTAGCGAGGCCCTGCTGGTaGTGCACCAGAGCGATGCCTGCGATAGCGCTGACC +
Preference number: 6 (lower is better)
Translates to: KPTSPGLARPCW*CTRAMPAIALT
Trigger: GGTCAGCGCTATCGCAGGCATCGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAACCCAGGGCTGGTGGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 72 bp AGCGACAAGCCCACCAGCCCTGGGTTAGCGAGGCCCTaGTGGTGCTGCACCAGAGCGATGCCTGCGATAGCG +
Preference number: 6 (lower is better)
Translates to: SDKPTSPGLARP*WCCTRAMPAIA
Trigger: CGCTATCGCAGGCATCGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAACCCAGGGCTGGTGGGCTTGTCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp CCACATGCCCACGCAGCCTGTGGAGCTCTCCAGCGATaGCAGCCAGCAGGGAGCTCTTCCCACAGCCGACCT +
Preference number: 6 (lower is better)
Translates to: PHAHAACGALQR*QPAGSSSHSRP
Trigger: AGGTCGGCTGTGGGAAGAGCTCCCTGCTGGCTGCCATCGCTGGAGAGCTCCACAGGCTGCGTGGGCATGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS CCA 72 bp GACAAGCCCACCAGCCCTGGGTTAGCGAGGCCCTGCTaGTGCTGCACCAGAGCGATGCCTGCGATAGCGCTG +
Preference number: 6 (lower is better)
Translates to: DKPTSPGLARPC*CCTRAMPAIAL
Trigger: CAGCGCTATCGCAGGCATCGCTCTGGTGCAGCACCAGCAGGGCCTCGCTAACCCAGGGCTGGTGGGCTTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CAA 72 bp AGCCCCAGCAGGCCTGCCGCGTTGGCCAGGAGGATGTaGAGGATGAAGGGCAGGCTGTCATCCGCACAGGCC +
Preference number: 6 (lower is better)
Translates to: SPSRPAALARRM*RMKGRLSSAQA
Trigger: GGCCTGTGCGGATGACAGCCTGCCCTTCATCCTCAACATCCTCCTGGCCAACGCGGCAGGCCTGCTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 72 bp GCAGGCGGCGATGCAGAGTGGCAGCTGCTTGAAGGGTaGCTGCTGCAAAGAGCACTGCCCGGAGAAGGGTGC +
Preference number: 6 (lower is better)
Translates to: AGGDAEWQLLEG*LLQRALPGEGC
Trigger: GCACCCTTCTCCGGGCAGTGCTCTTTGCAGCAGGCACCCTTCAAGCAGCTGCCACTCTGCATCGCCGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372512.2
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GAGGCCAGCCAAGGTATCGGCCAGATGGCTATACAGTaGAGACAGGGTGAGGCTGCCCAGGCGCCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: EASQGIGQMAIQ*RQGEAAQAPQL
Trigger: GAGCTGCGGCGCCTGGGCAGCCTCACCCTGTCTCCACTGTATAGCCATCTGGCCGATACCTTGGCTGGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GGGCAGAGTCTGTACTTCACAATCCCCTGCCAGACCTaGGCAGACACCTCCCTCACACGGGGCTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: GQSLYFTIPCQT*ADTSLTRGSCP
Trigger: GGGGCAGGAGCCCCGTGTGAGGGAGGTGTCTGCCCAGGTCTGGCAGGGGATTGTGAAGTACAGACTCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 72 bp GCCCTGGGGGAGAGAAGTACCAGCTGCTGGGAGAGCTaGGACACCGGGACGTTTGTGGGAGACTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: ALGERSTSCWES*DTGTFVGDSPG
Trigger: GCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS CAA 90 bp ACCGGTAGGGCAGCCCACAGGTATACACAGGCCGCATCCAGGTATTaGATGACCCGGAGTCGCCCCAGCTCTCGAGCCCGGCAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: TGRAAHRYTQAASRY*MTRSRPSSRARQAS
Trigger: AGAGGCCTGCCGGGCTCGAGAGCTGGGGCGACTCCGGGTCATCAAATACCTGGATGCGGCCTGTGTATACCTGTGGGCTGCCCTACCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CAA 90 bp AGCCCACCAGCCCTGGGGGAGAGAAGTACCAGCTGCTGGGAGAGCTaGGACACCGGGACGTTTGTGGGAGACTCCCCAGGCTGTGGACTG +
Preference number: 6 (lower is better)
Translates to: SPPALGERSTSCWES*DTGTFVGDSPGCGL
Trigger: CAGTCCACAGCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGGCTGGTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS GCA 72 bp GGGAGAAGTGGGGGCAGAAGTGTGCCTCGCTGGCAATaGCACAACACGGTCAGCACTAGGGCTGGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GRSGGRSVPRWQ*HNTVSTRAGAG
Trigger: GCCAGCTCCAGCCCTAGTGCTGACCGTGTTGTGGCATTGCCAGCGAGGCACACTTCTGCCCCCACTTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 72 bp TCAGCAGCACCGCGTCAGCCCTCTCCAGGTACTCAGTaGGGTGGGTGCAGAGCAGCCGTGTGGTGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: SAAPRQPSPGTQ*GGCRAAVWCSS
Trigger: TGAGCTACACCACACGGCTGCTCTGCACCCACCGCACTGAGTACCTGGAGAGGGCTGACGCGGTGCTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GGCCCTGGGAGAAGTGGGGGCAGAAGTGTGCCTCGCTaGCAATGCCACAACACGGTCAGCACTAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GPGRSGGRSVPR*QCHNTVSTRAG
Trigger: TCCAGCCCTAGTGCTGACCGTGTTGTGGCATTGCCAGCGAGGCACACTTCTGCCCCCACTTCTCCCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 72 bp GCAGGTTCTCCTCCTCAAACCTGTAGGTGGCCCCTGTaGCCCGGAGCACAGAGAGGCCAGCCAAGGTATCGG +
Preference number: 6 (lower is better)
Translates to: AGSPPQTCRWPL*PGAQRGQPRYR
Trigger: CCGATACCTTGGCTGGCCTCTCTGTGCTCCGGGCCACAGGGGCCACCTACAGGTTTGAGGAGGAGAACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GCAGAAGGTCACTCCATCCAGGGCATTCGGCAGCCCTaGCCGGTACGCCAACACCACGTCCTGGAACTCCAC +
Preference number: 6 (lower is better)
Translates to: AEGHSIQGIRQP*PVRQHHVLELH
Trigger: GTGGAGTTCCAGGACGTGGTGTTGGCGTACCGGCCAGGGCTGCCGAATGCCCTGGATGGAGTGACCTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000437104.3
ENST00000463024.1
CDS CCA 72 bp CCCTGGGGGAGAGAAGTACCAGCTGCTGGGAGAGCTTaGACACCGGGACGTTTGTGGGAGACTCCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: PWGREVPAAGRA*TPGRLWETPQA
Trigger: AGCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS CAA 72 bp GCAGCCCACAGGTATACACAGGCCGCATCCAGGTATTaGATGACCCGGAGTCGCCCCAGCTCTCGAGCCCGG +
Preference number: 6 (lower is better)
Translates to: AAHRYTQAASRY*MTRSRPSSRAR
Trigger: CCGGGCTCGAGAGCTGGGGCGACTCCGGGTCATCAAATACCTGGATGCGGCCTGTGTATACCTGTGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CAA 90 bp GGCCACGCCTACCTGCTGGTACAGCAGGTAGAGGGTGATGGCCAGTaGCAGGGGCAGGCCCCAGGCTTCATGGAAGCTCCCAGCAAAGTT +
Preference number: 6 (lower is better)
Translates to: GHAYLLVQQVEGDGQ*QGQAPGFMEAPSKV
Trigger: AACTTTGCTGGGAGCTTCCATGAAGCCTGGGGCCTGCCCCTGCAACTGGCCATCACCCTCTACCTGCTGTACCAGCAGGTAGGCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 72 bp GCCGCCCCCATGAGCTGTAGCCGAATGTCCAGCCACTaGATTGTGGCACTGGTGGCAAACTGGCACCTCTGG +
Preference number: 6 (lower is better)
Translates to: AAPMSCSRMSSH*IVALVANWHLW
Trigger: CCAGAGGTGCCAGTTTGCCACCAGTGCCACAATGCAGTGGCTGGACATTCGGCTACAGCTCATGGGGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 72 bp ATAGGCCCGGCCTGGATCAGAGAGAGGGGAGAACTCTaGAGGGTGTGGGATTGGGCTCAGGGACCTCCGAGT +
Preference number: 6 (lower is better)
Translates to: IGPAWIRERGEL*RVWDWAQGPPS
Trigger: ACTCGGAGGTCCCTGAGCCCAATCCCACACCCTGCAGAGTTCTCCCCTCTCTCTGATCCAGGCCGGGCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CCA 72 bp CTGCCAGTGTGCCTGGAAGACACGAGCCAGGTAGGTTaGCTGCAGTCTGTGGGGGAGGCGGCAAATGTCCTG +
Preference number: 6 (lower is better)
Translates to: LPVCLEDTSQVG*LQSVGEAANVL
Trigger: CAGGACATTTGCCGCCTCCCCCACAGACTGCAGCCAACCTACCTGGCTCGTGTCTTCCAGGCACACTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 72 bp GGACAGGGCATAAGACAGCGACAAGCCCACCAGCCCTaGGGGAGAGAAGTACCAGCTGCTGGGAGAGCTTGG +
Preference number: 6 (lower is better)
Translates to: GQGIRQRQAHQP*GREVPAAGRAW
Trigger: CCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCCCCAGGGCTGGTGGGCTTGTCGCTGTCTTATGCCCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS CAA 72 bp GTACCAGCTGCTGGGAGAGCTTGGACACCGGGACGTTaGTGGGAGACTCCCCAGGCTGTGGACTGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: VPAAGRAWTPGR*WETPQAVDCWH
Trigger: ATGCCAGCAGTCCACAGCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS TCA 72 bp GGTTGCGCCTCCTGGGAGCTATTCTCAGCCTTCAGCTaGGAGATCCAGTGGGAGAGCCACCAGTCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: GCASWELFSAFS*EIQWESHQSAA
Trigger: CGCTGCTGACTGGTGGCTCTCCCACTGGATCTCTCAGCTGAAGGCTGAGAATAGCTCCCAGGAGGCGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 72 bp GGAAGGAAGCTGCAAGTCGGAGGCGCCATCCAGGACTaGAGGGTAGGATGTAATCTGGACTCCTCGGGGTGC +
Preference number: 6 (lower is better)
Translates to: GRKLQVGGAIQD*RVGCNLDSSGC
Trigger: GCACCCCGAGGAGTCCAGATTACATCCTACCCTGCAGTCCTGGATGGCGCCTCCGACTTGCAGCTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372530.9
CDS CCA 72 bp CCAGCTGCTGGGAGAGCTTGGACACCGGGACGTTTGTaGGAGACTCCCCAGGCTGTGGACTGCTGGCATTTA +
Preference number: 6 (lower is better)
Translates to: PAAGRAWTPGRL*ETPQAVDCWHL
Trigger: TAAATGCCAGCAGTCCACAGCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS CCA 72 bp CATAGGAGGTTGGTTACCTGTGGAGCTCTCCAGCGATaGCAGCCAGCAGGGAGCTCTTCCCACAGCCGACCT +
Preference number: 6 (lower is better)
Translates to: HRRLVTCGALQR*QPAGSSSHSRP
Trigger: AGGTCGGCTGTGGGAAGAGCTCCCTGCTGGCTGCCATCGCTGGAGAGCTCCACAGGTAACCAACCTCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 72 bp GCTTGGTACACGTGCAAGGCCACGGCGCCCTCCTTCTaGCTTTCTTCCTGCAGCAGGCGACCAGATGTGCTC +
Preference number: 6 (lower is better)
Translates to: AWYTCKATAPSF*LSSCSRRPDVL
Trigger: GAGCACATCTGGTCGCCTGCTGCAGGAAGAAAGCAAGAAGGAGGGCGCCGTGGCCTTGCACGTGTACCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CAA 90 bp CAGCTGCGGAGAGAAGAGCCCCATAGAAGCTGGGCTGGTGGAGGGTaGCGCCTCCTGGGAGCTATTCTCAGCCTTCAGCTGAGAGATCCA +
Preference number: 6 (lower is better)
Translates to: QLRREEPHRSWAGGG*RLLGAILSLQLRDP
Trigger: TGGATCTCTCAGCTGAAGGCTGAGAATAGCTCCCAGGAGGCGCAACCCTCCACCAGCCCAGCTTCTATGGGGCTCTTCTCTCCGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS GCA 72 bp GGCAGCTGCTTGAAGGGTGCCTGCTGCAAAGAGCACTaGCCGGAGAAGGGTGCAGAGGGAATTTACACCAGC +
Preference number: 6 (lower is better)
Translates to: GSCLKGACCKEH*PEKGAEGIYTS
Trigger: GCTGGTGTAAATTCCCTCTGCACCCTTCTCCGGGCAGTGCTCTTTGCAGCAGGCACCCTTCAAGCAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372512.2
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GTGATGGCCAGTTGCAGGGGCAGGCCCCAGGCTTCATaGAAGCTCCCAGCAAAGTTAAGCAGCCGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: VMASCRGRPQAS*KLPAKLSSRSE
Trigger: CTCTGAACGGCTGCTTAACTTTGCTGGGAGCTTCCATGAAGCCTGGGGCCTGCCCCTGCAACTGGCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 72 bp AGAAACGGATGTCTGAGGAGCCATTGGGGGCAGCTTTaGGCAGTGGGAACACTGGGATGCTGGGTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RNGCLRSHWGQL*AVGTLGCWVVR
Trigger: CCTCACCACCCAGCATCCCAGTGTTCCCACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACATCCGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372512.2
CDS CCA 72 bp GGACGTTTGTGGGAGACTCCCCAGGCTGTGGACTGCTaGCATTTAAAGGAAGCAACAGAGGCTGGGCGCGGT +
Preference number: 6 (lower is better)
Translates to: GRLWETPQAVDC*HLKEATEAGRG
Trigger: ACCGCGCCCAGCCTCTGTTGCTTCCTTTAAATGCCAGCAGTCCACAGCCTGGGGAGTCTCCCACAAACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS CAA 90 bp GGGAGAGAAGTACCAGCTGCTGGGAGAGCTTGGACACCGGGACGTTaGTGGGAGACTCCCCAGGCTGTGGACTGCTGGCATTTAAAGGAA +
Preference number: 6 (lower is better)
Translates to: GREVPAAGRAWTPGR*WETPQAVDCWHLKE
Trigger: TTCCTTTAAATGCCAGCAGTCCACAGCCTGGGGAGTCTCCCACAAACGTCCCGGTGTCCAAGCTCTCCCAGCAGCTGGTACTTCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437104.3
CDS GCA 72 bp GGAAGGAAGCTGCAAGTCGGAGGCGCCATCCAGGACTaGAGGGTAGGATGTAATCTGGACTCCTGGGGACAA +
Preference number: 6 (lower is better)
Translates to: GRKLQVGGAIQD*RVGCNLDSWGQ
Trigger: TTGTCCCCAGGAGTCCAGATTACATCCTACCCTGCAGTCCTGGATGGCGCCTCCGACTTGCAGCTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS GCA 72 bp TCCCAACATGGTCCCCACCAGCTTCAGCAGTCCAAGTaGCAGATAGCACCGTCCAAAGGCCCCATACAAGGC +
Preference number: 6 (lower is better)
Translates to: SQHGPHQLQQSK*QIAPSKGPIQG
Trigger: GCCTTGTATGGGGCCTTTGGACGGTGCTATCTGGCACTTGGACTGCTGAAGCTGGTGGGGACCATGTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS GCA 72 bp GGTGGCAATCACTTTGTTGACGGGTACCAGCAGCAGTaGCAAGATGAGACCACCCACGAAGGCCACGCCTAC +
Preference number: 6 (lower is better)
Translates to: GGNHFVDGYQQQ*QDETTHEGHAY
Trigger: GTAGGCGTGGCCTTCGTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CCA 72 bp GTAGGGAGAGCAACAGGGGCCCTGAGAATCCCAACATaGTCCCCACCAGCTTCAGCAGTCCAAGTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: VGRATGALRIPT*SPPASAVQVPD
Trigger: ATCTGGCACTTGGACTGCTGAAGCTGGTGGGGACCATGTTGGGATTCTCAGGGCCCCTGTTGCTCTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244533.7
ENST00000372530.9
CDS CCA 72 bp GCCTGGGGGTTGTGGTTTGGAAGGTCGAGGAAAAGCTaGATCCGGTCCAAGGACACTTTGGCCTCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: AWGLWFGRSRKS*IRSKDTLASRR
Trigger: TCTCCTGGAGGCCAAAGTGTCCTTGGACCGGATCCAGCTTTTCCTCGACCTTCCAAACCACAACCCCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GGGATCTGGGCTGTAGTAGGCCTGGGGGTTGTGGTTTaGAAGGTCGAGGAAAAGCTGGATCCGGTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: GIWAVVGLGVVV*KVEEKLDPVQG
Trigger: TCCTTGGACCGGATCCAGCTTTTCCTCGACCTTCCAAACCACAACCCCCAGGCCTACTACAGCCCAGATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GGAGAACAAGGCTCCATGCAGCTCCAATACTGTAGATaGCTCTGCAGGGGGATCTGGGCTGTAGTAGGCCTG +
Preference number: 6 (lower is better)
Translates to: GEQGSMQLQYCR*LCRGIWAVVGL
Trigger: CAGGCCTACTACAGCCCAGATCCCCCTGCAGAGCCATCTACAGTATTGGAGCTGCATGGAGCCTTGTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS CAA 72 bp CACAATCTGGGCTGTAGTAGGCCTGGGGGTTGTGGTTaGGAAGGTCGAGGAAAAGCTGGATCCGGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: HNLGCSRPGGCG*EGRGKAGSGPR
Trigger: CCTTGGACCGGATCCAGCTTTTCCTCGACCTTCCAAACCACAACCCCCAGGCCTACTACAGCCCAGATTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS CAA 90 bp AGCATTTCCTGGTTGCTGGCCATGATGCGGGTGGCAATCACTTTGTaGACGGGTACCAGCAGCAGTGCCAAGATGAGACCACCCACGAAG +
Preference number: 6 (lower is better)
Translates to: SISWLLAMMRVAITL*TGTSSSAKMRPPTK
Trigger: CTTCGTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCGCATCATGGCCAGCAACCAGGAAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CAA 90 bp TGTAGCATTTCCTGGTTGCTGGCCATGATGCGGGTGGCAATCACTTaGTTGACGGGTACCAGCAGCAGTGCCAAGATGAGACCACCCACG +
Preference number: 6 (lower is better)
Translates to: CSISWLLAMMRVAIT*LTGTSSSAKMRPPT
Trigger: CGTGGGTGGTCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCGCATCATGGCCAGCAACCAGGAAATGCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CAA 90 bp CAGTGTTTGCTAAAGGACAAAGTAAGGACAGGGGTGCATAGGAGGTaGGTTACCTGTGGAGCTCTCCAGCGATGGCAGCCAGCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: QCLLKDKVRTGVHRR*VTCGALQRWQPAGS
Trigger: GCTCCCTGCTGGCTGCCATCGCTGGAGAGCTCCACAGGTAACCAACCTCCTATGCACCCCTGTCCTTACTTTGTCCTTTAGCAAACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS TCA 72 bp AATGGTCGCATACACGGTGAGGTAGAAACGGATGTCTaGGGAGCCATTGGGGGCAGCTTTGGGCAGTGGGAA +
Preference number: 6 (lower is better)
Translates to: NGRIHGEVETDV*GAIGGSFGQWE
Trigger: TTCCCACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACATCCGTTTCTACCTCACCGTGTATGCGACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372512.2
ENST00000372530.9
ENST00000463024.1
CDS GCA 72 bp AGCAGCTCTGTCACAAGCTTAACCCGCGCATCCTTGTaGTGTAGCATTTCCTGGTTGCTGGCCATGATGCGG +
Preference number: 6 (lower is better)
Translates to: SSSVTSLTRASL*CSISWLLAMMR
Trigger: CCGCATCATGGCCAGCAACCAGGAAATGCTACAGCACAAGGATGCGCGGGTTAAGCTTGTGACAGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS GCA 72 bp GAAGTTGTTGAGAGGAAGAATGAGCATTCGCACCAGTaGCAGGGCCGTGAACACCTTGGTGGCAGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: EVVERKNEHSHQ*QGREHLGGSEL
Trigger: CAGCTCACTGCCACCAAGGTGTTCACGGCCCTGGCACTGGTGCGAATGCTCATTCTTCCTCTCAACAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS CCA 72 bp ACAATCTGGGCTGTAGTAGGCCTGGGGGTTGTGGTTTaGAAGGTCGAGGAAAAGCTGGATCCGGTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: TIWAVVGLGVVV*KVEEKLDPVQG
Trigger: TCCTTGGACCGGATCCAGCTTTTCCTCGACCTTCCAAACCACAACCCCCAGGCCTACTACAGCCCAGATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS CCA 72 bp AGAAACGGATGTCTGAGGAGCCATTGGGGGCAGCTTTaGGCAGTGGGAACACTGGGATGTAGAGGTTTCCAG +
Preference number: 6 (lower is better)
Translates to: RNGCLRSHWGQL*AVGTLGCRGFQ
Trigger: CTGGAAACCTCTACATCCCAGTGTTCCCACTGCCCAAAGCTGCCCCCAATGGCTCCTCAGACATCCGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp ATGTCCAGCCACTGCATTGTGGCACTGGTGGCAAACTaGCACCTCTGGTTTAGCTCAAGGAGTCGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: MSSHCIVALVAN*HLWFSSRSRRF
Trigger: GAACCTGCGACTCCTTGAGCTAAACCAGAGGTGCCAGTTTGCCACCAGTGCCACAATGCAGTGGCTGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp GCTGTAGCCGAATGTCCAGCCACTGCATTGTGGCACTaGTGGCAAACTGGCACCTCTGGTTTAGCTCAAGGA +
Preference number: 6 (lower is better)
Translates to: AVAECPATALWH*WQTGTSGLAQG
Trigger: TCCTTGAGCTAAACCAGAGGTGCCAGTTTGCCACCAGTGCCACAATGCAGTGGCTGGACATTCGGCTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CCA 72 bp TTGCAGATGGTCTGCTGGAGCAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCCTCATCGATACACAGG +
Preference number: 6 (lower is better)
Translates to: LQMVCWSSWSVF*STLAVASSIHR
Trigger: CCTGTGTATCGATGAGGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CCA 72 bp TTGGCAAAGCGTTTGCAGATGGTCTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACACTTGCTGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LAKRLQMVCWSS*SVFWSTLAVAS
Trigger: TGAGGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CAA 72 bp TGGTTGCTGGCCATGATGCGGGTGGCAATCACTTTGTaGACGGGTACCAGCAGCAGTGCCAAGATGAGACCA +
Preference number: 6 (lower is better)
Translates to: WLLAMMRVAITL*TGTSSSAKMRP
Trigger: TGGTCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCGCATCATGGCCAGCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CAA 72 bp TCCTGGTTGCTGGCCATGATGCGGGTGGCAATCACTTaGTTGACGGGTACCAGCAGCAGTGCCAAGATGAGA +
Preference number: 6 (lower is better)
Translates to: SWLLAMMRVAIT*LTGTSSSAKMR
Trigger: TCTCATCTTGGCACTGCTGCTGGTACCCGTCAACAAAGTGATTGCCACCCGCATCATGGCCAGCAACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CAA 72 bp AGGTCGAGGAAAAGCTGGATCCGGTCCAAGGACACTTaGGCCTCCAGGAGACCATTGATCACCCAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: RSRKSWIRSKDT*ASRRPLITQGK
Trigger: CTTCCCTTGGGTGATCAATGGTCTCCTGGAGGCCAAAGTGTCCTTGGACCGGATCCAGCTTTTCCTCGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS CAA 72 bp GAGAAGCGGTTTAGGATCCGGCCCGTGGGTGTGGCATaGAAGAAAGTCACTGGTGCCATAAGGACTCGATGC +
Preference number: 6 (lower is better)
Translates to: EKRFRIRPVGVA*KKVTGAIRTRC
Trigger: GCATCGAGTCCTTATGGCACCAGTGACTTTCTTCAATGCCACACCCACGGGCCGGATCCTAAACCGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CAA 90 bp GACACTTTGGCCTCCAGGAGACCATTGATCACCCAAGGGAAGTTGTaGAGAGGAAGAATGAGCATTCGCACCAGTGCCAGGGCCGTGAAC +
Preference number: 6 (lower is better)
Translates to: DTLASRRPLITQGKL*RGRMSIRTSARAVN
Trigger: GTTCACGGCCCTGGCACTGGTGCGAATGCTCATTCTTCCTCTCAACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGCCAAAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS CAA 90 bp AAGGACACTTTGGCCTCCAGGAGACCATTGATCACCCAAGGGAAGTaGTTGAGAGGAAGAATGAGCATTCGCACCAGTGCCAGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: KDTLASRRPLITQGK*LRGRMSIRTSARAV
Trigger: CACGGCCCTGGCACTGGTGCGAATGCTCATTCTTCCTCTCAACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGCCAAAGTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS GCA 72 bp GGGCAATGGTCAGCACTGTCTTGTTGGCAAAGCGTTTaGAGATGGTCTGCTGGAGCAGCTGGTCTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: GQWSALSCWQSV*RWSAGAAGLSS
Trigger: AGAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAAGACAGTGCTGACCATTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS GCA 72 bp AATGTCCATCCCCAAGAGGACCGCCAGAGCTATGCCTaGCACTCTGTCCAGGGTTACTTCTCATTACTGCAG +
Preference number: 6 (lower is better)
Translates to: NVHPQEDRQSYA*HSVQGYFSLLQ
Trigger: CTGCAGTAATGAGAAGTAACCCTGGACAGAGTGGCAGGCATAGCTCTGGCGGTCCTCTTGGGGATGGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS GCA 72 bp GACGAATGTCCATCCCCAAGAGGACCGCCAGAGCTATaGCTGCCACTCTGTCCAGGGTTACTTCTCATTACT +
Preference number: 6 (lower is better)
Translates to: DECPSPRGPPEL*LPLCPGLLLIT
Trigger: AGTAATGAGAAGTAACCCTGGACAGAGTGGCAGGCATAGCTCTGGCGGTCCTCTTGGGGATGGACATTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp AGCTTAACCCGCGCATCCTTGTGCTGTAGCATTTCCTaGTTGCTGGCCATGATGCGGGTGGCAATCACTTTG +
Preference number: 6 (lower is better)
Translates to: SLTRASLCCSIS*LLAMMRVAITL
Trigger: CAAAGTGATTGCCACCCGCATCATGGCCAGCAACCAGGAAATGCTACAGCACAAGGATGCGCGGGTTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CCA 72 bp CTGAGTCAGACTCTTGTCCATTCTCAGCCCAGGCTTTaGGGACAGCTTGTACCAGTGGCAGAATCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: LSQTLVHSQPRL*GQLVPVAESQR
Trigger: CCTCTGAGATTCTGCCACTGGTACAAGCTGTCCCCAAAGCCTGGGCTGAGAATGGACAAGAGTCTGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
CDS CAA 72 bp CTCAGCAGCTCTGTCACAAGCTTAACCCGCGCATCCTaGTGCTGTAGCATTTCCTGGTTGCTGGCCATGATG +
Preference number: 6 (lower is better)
Translates to: LSSSVTSLTRAS*CCSISWLLAMM
Trigger: CATCATGGCCAGCAACCAGGAAATGCTACAGCACAAGGATGCGCGGGTTAAGCTTGTGACAGAGCTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000443426.2
CDS CAA 72 bp GCCTCCAGGAGACCATTGATCACCCAAGGGAAGTTGTaGAGAGGAAGAATGAGCATTCGCACCAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: ASRRPLITQGKL*RGRMSIRTSAR
Trigger: CCTGGCACTGGTGCGAATGCTCATTCTTCCTCTCAACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS CAA 72 bp TGGGCAATGGTCAGCACTGTCTTGTTGGCAAAGCGTTaGCAGATGGTCTGCTGGAGCAGCTGGTCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: WAMVSTVLLAKR*QMVCWSSWSVF
Trigger: GAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAAGACAGTGCTGACCATTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CAA 72 bp GTGTTGAGCCTATGGGCAATGGTCAGCACTGTCTTGTaGGCAAAGCGTTTGCAGATGGTCTGCTGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: VLSLWAMVSTVL*AKRLQMVCWSS
Trigger: GCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAAGACAGTGCTGACCATTGCCCATAGGCTCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CAA 72 bp CTAAAGGACAAAGTAAGGACAGGGGTGCATAGGAGGTaGGTTACCTGTGGAGCTCTCCAGCGATGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: LKDKVRTGVHRR*VTCGALQRWQP
Trigger: TGGCTGCCATCGCTGGAGAGCTCCACAGGTAACCAACCTCCTATGCACCCCTGTCCTTACTTTGTCCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 90 bp CTAATCTACCACAATCTGGGCTGTAGTAGGCCTGGGGGTTGTGGTTaGGAAGGTCGAGGAAAAGCTGGATCCGGTCCAAGGACACTTTGG +
Preference number: 6 (lower is better)
Translates to: LIYHNLGCSRPGGCG*EGRGKAGSGPRTLW
Trigger: CCAAAGTGTCCTTGGACCGGATCCAGCTTTTCCTCGACCTTCCAAACCACAACCCCCAGGCCTACTACAGCCCAGATTGTGGTAGATTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS CAA 90 bp ACCTCCTTGTACAGCTGTGCATCAAATGTCTTCCCAAAGAGGATGTaGTCTCGGATGGTGGCAAACTGGATCCAGGGTTCCTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: TSLYSCASNVFPKRM*SRMVANWIQGSWVA
Trigger: GGCCACCCAGGAACCCTGGATCCAGTTTGCCACCATCCGAGACAACATCCTCTTTGGGAAGACATTTGATGCACAGCTGTACAAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS CAA 90 bp TTGAGCCTATGGGCAATGGTCAGCACTGTCTTGTTGGCAAAGCGTTaGCAGATGGTCTGCTGGAGCAGCTGGTCTGTCTTCTGGTCCACA +
Preference number: 6 (lower is better)
Translates to: LSLWAMVSTVLLAKR*QMVCWSSWSVFWST
Trigger: TGTGGACCAGAAGACAGACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAAGACAGTGCTGACCATTGCCCATAGGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS CAA 90 bp TTCAGGATCGTGTTGAGCCTATGGGCAATGGTCAGCACTGTCTTGTaGGCAAAGCGTTTGCAGATGGTCTGCTGGAGCAGCTGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: FRIVLSLWAMVSTVL*AKRLQMVCWSSWSV
Trigger: GACAGACCAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAAGACAGTGCTGACCATTGCCCATAGGCTCAACACGATCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372530.9
ENST00000463024.1
ENST00000505344.1
CDS TCA 72 bp AGAGGGAATTTACACCAGCAATGGTCGCATACACGGTaGGGTAGAAACGGATGTCTGAGGAGCCATTGGGGG +
Preference number: 6 (lower is better)
Translates to: RGNLHQQWSHTR*GRNGCLRSHWG
Trigger: CCCCCAATGGCTCCTCAGACATCCGTTTCTACCTCACCGTGTATGCGACCATTGCTGGTGTAAATTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372512.2
ENST00000372530.9
ENST00000463024.1
CDS TCA 72 bp ACCTCGAGCAGGACTCAAGTCCATCCTTGTAAACCTTaGTTCCGACCAGCAGAGAGGGACGAATGTCCATCC +
Preference number: 6 (lower is better)
Translates to: TSSRTQVHPCKP*FRPAERDECPS
Trigger: GGATGGACATTCGTCCCTCTCTGCTGGTCGGAATCAAGGTTTACAAGGATGGACTTGAGTCCTGCTCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 90 bp TGGTTTGGAAGGTCGAGGAAAAGCTGGATCCGGTCCAAGGACACTTaGGCCTCCAGGAGACCATTGATCACCCAAGGGAAGTTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: WFGRSRKSWIRSKDT*ASRRPLITQGKLLR
Trigger: TCTCAACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGCCAAAGTGTCCTTGGACCGGATCCAGCTTTTCCTCGACCTTCCAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS CAA 90 bp AAAAGCTGGATCCGGTCCAAGGACACTTTGGCCTCCAGGAGACCATaGATCACCCAAGGGAAGTTGTTGAGAGGAAGAATGAGCATTCGC +
Preference number: 6 (lower is better)
Translates to: KSWIRSKDTLASRRP*ITQGKLLRGRMSIR
Trigger: GCGAATGCTCATTCTTCCTCTCAACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGCCAAAGTGTCCTTGGACCGGATCCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS GCA 72 bp GGGAGATTGGGAGAGGACTGTTCTGAGTCTATACTATaGCTTTCTCAGTGCGTGTGCAGATCCCACCTCTCA +
Preference number: 6 (lower is better)
Translates to: GRLGEDCSESIL*LSQCVCRSHLS
Trigger: TGAGAGGTGGGATCTGCACACGCACTGAGAAAGGCATAGTATAGACTCAGAACAGTCCTCTCCCAATCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 72 bp ATCCGGTCCAAGGACACTTTGGCCTCCAGGAGACCATaGATCACCCAAGGGAAGTTGTTGAGAGGAAGAATG +
Preference number: 6 (lower is better)
Translates to: IRSKDTLASRRP*ITQGKLLRGRM
Trigger: CATTCTTCCTCTCAACAACTTCCCTTGGGTGATCAATGGTCTCCTGGAGGCCAAAGTGTCCTTGGACCGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
CDS CAA 90 bp GCGAAGAAGGGAAGAAATAGCTCTTTGGCTACAGCCAAGCAGCTGTaGTACTTACATCTGTTCAGGAGCTCAGTGGAGAGTATGGCCACC +
Preference number: 6 (lower is better)
Translates to: AKKGRNSSLATAKQL*YLHLFRSSVESMAT
Trigger: GGTGGCCATACTCTCCACTGAGCTCCTGAACAGATGTAAGTACAACAGCTGCTTGGCTGTAGCCAAAGAGCTATTTCTTCCCTTCTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 72 bp TACAGCTGTGCATCAAATGTCTTCCCAAAGAGGATGTaGTCTCGGATGGTGGCAAACTGGATCCAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: YSCASNVFPKRM*SRMVANWIQGS
Trigger: GGAACCCTGGATCCAGTTTGCCACCATCCGAGACAACATCCTCTTTGGGAAGACATTTGATGCACAGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244533.7
ENST00000372515.8
ENST00000372530.9
ENST00000463024.1
CDS CAA 72 bp CTGTTCAGGAGCTCAGTGGAGAGTATGGCCACCACATaGTACTTGTTCCCATCTGAAAACAAGGTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: LFRSSVESMATT*YLFPSENKVLP
Trigger: AGGGAGGACCTTGTTTTCAGATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTCCTGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 90 bp CATCTGTTCAGGAGCTCAGTGGAGAGTATGGCCACCACATTGTACTaGTTCCCATCTGAAAACAAGGTCCTCCCTCAAACCTATGCTCCT +
Preference number: 6 (lower is better)
Translates to: HLFRSSVESMATTLY*FPSENKVLPQTYAP
Trigger: AGGAGCATAGGTTTGAGGGAGGACCTTGTTTTCAGATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTCCTGAACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp GAAAACAAGGTCCTCCCTCAAACCTATGCTCCTCTCTaGATCCCTTCTCTGCACAGCCACATTTCTGAAAGA +
Preference number: 6 (lower is better)
Translates to: ENKVLPQTYAPL*IPSLHSHISER
Trigger: TCTTTCAGAAATGTGGCTGTGCAGAGAAGGGATCCAGAGAGGAGCATAGGTTTGAGGGAGGACCTTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp GCCCATTCTGGGCGAAGAAGGGAAGAAATAGCTCTTTaGCTACAGCCAAGCAGCTGTTGTACTTACATCTGT +
Preference number: 6 (lower is better)
Translates to: AHSGRRREEIAL*LQPSSCCTYIC
Trigger: ACAGATGTAAGTACAACAGCTGCTTGGCTGTAGCCAAAGAGCTATTTCTTCCCTTCTTCGCCCAGAATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp GCACCCAGTCACAAAGCCCATGAGTCCCAAATACACTaGCATTTTACCAACGTACTCCTTTTCCCTCCTGTT +
Preference number: 6 (lower is better)
Translates to: APSHKAHESQIH*HFTNVLLFPPV
Trigger: AACAGGAGGGAAAAGGAGTACGTTGGTAAAATGCCAGTGTATTTGGGACTCATGGGCTTTGTGACTGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp AGCAGCTGTTGTACTTACATCTGTTCAGGAGCTCAGTaGAGAGTATGGCCACCACATTGTACTTGTTCCCAT +
Preference number: 6 (lower is better)
Translates to: SSCCTYICSGAQ*RVWPPHCTCSH
Trigger: ATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTCCTGAACAGATGTAAGTACAACAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 72 bp GGAAGAAATAGCTCTTTGGCTACAGCCAAGCAGCTGTaGTACTTACATCTGTTCAGGAGCTCAGTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: GRNSSLATAKQL*YLHLFRSSVES
Trigger: ACTCTCCACTGAGCTCCTGAACAGATGTAAGTACAACAGCTGCTTGGCTGTAGCCAAAGAGCTATTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 90 bp TACTTACATCTGTTCAGGAGCTCAGTGGAGAGTATGGCCACCACATaGTACTTGTTCCCATCTGAAAACAAGGTCCTCCCTCAAACCTAT +
Preference number: 6 (lower is better)
Translates to: YLHLFRSSVESMATT*YLFPSENKVLPQTY
Trigger: ATAGGTTTGAGGGAGGACCTTGTTTTCAGATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTCCTGAACAGATGTAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS TCA 72 bp TCTTCCCAGATGAACCTAACTCATTTTCTGACCAACTaGGCTAACCGGCCACCTGAACCTAACTCATTTTCT +
Preference number: 6 (lower is better)
Translates to: SSQMNLTHFLTN*ANRPPEPNSFS
Trigger: AGAAAATGAGTTAGGTTCAGGTGGCCGGTTAGCTCAGTTGGTCAGAAAATGAGTTAGGTTCATCTGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS GCA 72 bp ATTCACTTACCTAAGGAATCAACTCCCTTCCTGCCTTaGACATCTTATCCCTACTCCACTTTACCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: IHLPKESTPFLP*TSYPYSTLPQN
Trigger: GTTCTGAGGTAAAGTGGAGTAGGGATAAGATGTGCAAGGCAGGAAGGGAGTTGATTCCTTAGGTAAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244533.7
CDS GCA 72 bp CAGGGTTACTTCTCATTACTGCAGAGCTTTTTCTCATaGTTCGCTCAATTCCTAATATCTGGCTGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: QGYFSLLQSFFS*FAQFLISGWSF
Trigger: GAAGCTCCAGCCAGATATTAGGAATTGAGCGAAGCATGAGAAAAAGCTCTGCAGTAATGAGAAGTAACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp TGTACTTACATCTGTTCAGGAGCTCAGTGGAGAGTATaGCCACCACATTGTACTTGTTCCCATCTGAAAACA +
Preference number: 6 (lower is better)
Translates to: CTYICSGAQWRV*PPHCTCSHLKT
Trigger: TGTTTTCAGATGGGAACAAGTACAATGTGGTGGCCATACTCTCCACTGAGCTCCTGAACAGATGTAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp GAGCTTTTTCTCATGCTTCGCTCAATTCCTAATATCTaGCTGGAGCTTCATTTCCTCCTATTTCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: ELFLMLRSIPNI*LELHFLLFLSQ
Trigger: CTGGGAGAGAAATAGGAGGAAATGAAGCTCCAGCCAGATATTAGGAATTGAGCGAAGCATGAGAAAAAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 72 bp GGAGCTTCATTTCCTCCTATTTCTCTCCCAGTAAACTaGCAGGTGGTCACATCCCTCTGCATAAAAATCTTT +
Preference number: 6 (lower is better)
Translates to: GASFPPISLPVN*QVVTSLCIKIF
Trigger: AAAGATTTTTATGCAGAGGGATGTGACCACCTGCAAGTTTACTGGGAGAGAAATAGGAGGAAATGAAGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CAA 90 bp ATGATTACAATGATTCGCTTTCTTGGCCACCTCCTTCTTTCCAGATaGAAAACTCTCCCAATAAAGGGACCATGCGTTGCTCTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: MITMIRFLGHLLLSR*KTLPIKGPCVALLS
Trigger: ACTAAGAAGAGCAACGCATGGTCCCTTTATTGGGAGAGTTTTCAATCTGGAAAGAAGGAGGTGGCCAAGAAAGCGAATCATTGTAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463024.1
CDS CCA 72 bp TTTTTCTCATGCTTCGCTCAATTCCTAATATCTGGCTaGAGCTTCATTTCCTCCTATTTCTCTCCCAGTAAA +
Preference number: 6 (lower is better)
Translates to: FFSCFAQFLISG*SFISSYFSPSK
Trigger: TTTACTGGGAGAGAAATAGGAGGAAATGAAGCTCCAGCCAGATATTAGGAATTGAGCGAAGCATGAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463024.1