RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000103222, ENSG00000278183

Ensembl transcript IDs: ENST00000399408.7, ENST00000399410.8, ENST00000572882.3, ENST00000574224.2, ENST00000574761.1, ENST00000575422.5, ENST00000576557.1, ENST00000621144.4, ENST00000621659.2, ENST00000622828.3, ENST00000632338.1, ENST00000632908.1, ENST00000633802.1, ENST00000634072.1, ENST00000676806.1, ENST00000677164.1, ENST00000678422.1, ENST00000679043.1

Found 1733 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGGCAGTAGTTCCGGAATTCCACTCGGCCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCTGGATTTGCCAGGGCGCCTCCTTCT +
Preference number: 1 (lower is better)
Translates to: AGSSSGIPLGPPGAS*WAELSPGFARAPPS
Trigger: AGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGAATTCCGGAACTACTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CCA 90 bp GGCAGTAGTTCCGGAATTCCACTCGGCCCACCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGATTTGCCAGGGCGCCTCCTTCTCAG +
Preference number: 1 (lower is better)
Translates to: GSSSGIPLGPPGASC*AELSPGFARAPPSQ
Trigger: CTGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGAATTCCGGAACTACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 90 bp TGGTTCTCGTCCACCTTCAGGTCACTCTGGTGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCG +
Preference number: 1 (lower is better)
Translates to: WFSSTFRSLWWMKRS*SSKARMTLTPSKVS
Trigger: CGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGTGGACGAGAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 90 bp TTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGCCAGCTCTGGGGCTCACACCAAGCC +
Preference number: 1 (lower is better)
Translates to: LPGVLTPPWALAYRP*SSDQICQLWGSHQA
Trigger: GGCTTGGTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CCA 90 bp AGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACAGGCGTaGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGA +
Preference number: 1 (lower is better)
Translates to: RLAVSPTRSLPGGQA*ECRGCLWPKTRTGR
Trigger: TCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCTGTCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR GCA 90 bp GCCTCCATCAGCTTCCAGGTCTCCTCCTTCTTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTA +
Preference number: 1 (lower is better)
Translates to: ASISFQVSSFLASAF*SSAVLLWCLLMSPL
Trigger: TAGTGGGGACATCAGCAGGCACCACAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAAGAAGGAGGAGACCTGGAAGCTGATGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 90 bp GAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTTTGAGTaGCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGCCCTG +
Preference number: 1 (lower is better)
Translates to: ELVELALRCWFPAFE*LEDQMLVRGPSRAL
Trigger: CAGGGCCCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 90 bp TTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAG +
Preference number: 1 (lower is better)
Translates to: FQCGRLGLPGVLTPP*ALAYRPCSSDQICQ
Trigger: CTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 90 bp TCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTaGGCCAGCTCCAGGGACGTCCAGACTTCTTCATCCGAGTACTGG +
Preference number: 1 (lower is better)
Translates to: SWSSLSGRADTKSFR*ASSRDVQTSSSEYW
Trigger: CCAGTACTCGGATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 90 bp GCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTA +
Preference number: 1 (lower is better)
Translates to: AASGPKRELVELALR*WFPAFECLEDQMLV
Trigger: TACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 90 bp TATACAACCAATTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCT +
Preference number: 1 (lower is better)
Translates to: YTTNSSRSLAAKTPP*EAPGNHLHSWGREA
Trigger: AGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAATTGGTTGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 90 bp GCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTaGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGA +
Preference number: 1 (lower is better)
Translates to: ASGPKRELVELALRC*FPAFECLEDQMLVR
Trigger: TCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 90 bp TTTGGCCATGCTGTAGAAAAGACCTCTCTGCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCAC +
Preference number: 1 (lower is better)
Translates to: FGHAVEKTSLLQEVR*GAVLLDFSFVQDDH
Trigger: GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTTCTACAGCATGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 90 bp ACAAGGATGTTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTG +
Preference number: 1 (lower is better)
Translates to: TRMLEVMGARSISKT*SPQTSAGEIRGSRL
Trigger: CAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAACATCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR TCA 90 bp CTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCTTCTATACAACCAATTCCTCCAGAA +
Preference number: 1 (lower is better)
Translates to: LAVHRLRLERSEAVG*IWSLGSSIQPIPPE
Trigger: TTCTGGAGGAATTGGTTGTATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 90 bp ATTTGGTCACTAGGATCTTCTATACAACCAATTCCTCCAGAAGTCTaGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGC +
Preference number: 1 (lower is better)
Translates to: IWSLGSSIQPIPPEV*LPKLLRGKHQETTC
Trigger: GCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAATTGGTTGTATAGAAGATCCTAGTGACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: WSSLSGRADTKSFRWASSPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...GGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEADHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 2 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCCGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 2 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEARPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: RRGSAEAASGPKRELVELLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCCAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 2 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEAQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 90 bp AGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTaGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: SLAAKTPPWEAPGNH*HSWGREAVCLSQGT
Trigger: GGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: SGPKRELVELALRCWFPAVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: SGPKRELVELALRCWFPAVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEALRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 2 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEAAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RRGSAEAASGPKRELVELSKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: RRGSAEAASGPKRELVELSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 2 (lower is better)
Translates to: SGPKRELVELALRCWFPAVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 2 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 90 bp ATCACCCTGAGGTTCTCCCCGCCTTCTGCACATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ITLRFSPPSAHSWSS*SGRADTKSFRWASS
Trigger: GGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGGCGGGGAGAACCTCAGGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 2 (lower is better)
Translates to: RRGSAEAASGPKRELVELDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 2 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCATGGGTGACCGCAGGATaGTGTGCAGCAGGTCCACGT +
Preference number: 2 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPWVTAG*CAAGPR
Trigger: ACGTGGACCTGCTGCACAGCATCCTGCGGTCACCCA...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp CGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACCCTGAGCCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 2 (lower is better)
Translates to: RWGAVLLDFSFVQDDHPEPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...CTCAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAAGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 2 (lower is better)
Translates to: SSKARMTLTPSKVSLKWEVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 90 bp GCGATGGGCGTGGCCAGCAGGATAACGATGCAGGCACCAATGACGTaGAACAGGGAGCCCATGAACATCTTGATGACCTCCGGGATCATG +
Preference number: 2 (lower is better)
Translates to: AMGVASRITMQAPMT*NREPMNILMTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTGCATCGTTATCCTGCTGGCCACGCCCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCT +
Preference number: 2 (lower is better)
Translates to: RRGSAEAASGPKRELVELSEAVG*IWSLGS
Trigger: AGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp CGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACCCTGAGAGGAGGAGGAGCTGCTaGGCTGTCCATGAGATCTGT +
Preference number: 2 (lower is better)
Translates to: RWGAVLLDFSFVQDDHPERRRSC*AVHEIC
Trigger: ACAGATCTCATGGACAGCTCAGCAGCTCCTCCTCCT...CTCAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 2 (lower is better)
Translates to: PEASQRLAVHRLRLERSEAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCATGGGAGTGCAGAGGCTaGCTCTGGCCCAAAACGAGA +
Preference number: 2 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPWECRG*LWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCA...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: SGPKRELVELALRCWFPASLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp CGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACCCTGAGACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: RWGAVLLDFSFVQDDHPETESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...CTCAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACACTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: RRGSAEAASGPKRELVELCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 2 (lower is better)
Translates to: SGPKRELVELALRCWFPACRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACTGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 2 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHCRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHTFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp TGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCTGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: WSSLSGRADTKSFRWASSCWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...GGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSRVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: TETNTVSNTGRASHYFLGVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: TETNTVSNTGRASHYFLGVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 2 (lower is better)
Translates to: SGPKRELVELALRCWFPADALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 2 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWALAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 2 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 2 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 2 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: TQRPTRFQTQGELLTISWDHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: TETNTVSNTGRASHYFLGDHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGAGGGAAGCCCCAGGTaGAACGTCGGCCCTGAGACA +
Preference number: 2 (lower is better)
Translates to: QRPTRFQTQGELLTISWEEGSPR*NVGPET
Trigger: TGTCTCAGGGCCGACGTTCCACCTGGGGCTTCCCTC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGTGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSSSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CAA 90 bp ACGATGCAGGCACCAATGACGTTGAACAGGGAGCCCATGAACATCTaGATGACCTCCGGGATCATGGAGTCCACTGTGTCCAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: TMQAPMTLNREPMNI*MTSGIMESTVSSSL
Trigger: CAAGGAGCTGGACACAGTGGACTCCATGATCCCGGAGGTCATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTGCATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 2 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGLVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 2 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLLVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: LEVMGARSISKTCSPQTSLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 2 (lower is better)
Translates to: PEASQRLAVHRLRLERSEAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCTTCTCACTATTTCCTaGGAATGTTACTTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLLLTIS*ECYFSA
Trigger: GGCTGAGAAGTAACATTCCCAGGAAATAGTGAGAAG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 90 bp ATGGTGATCTTGAAGCGGAGGTCGTGCAGGCCGATCTTGGCGATGTaGATGCCATCGATGATGATCTCTCCTTCGGCAGACTCGTTGATC +
Preference number: 2 (lower is better)
Translates to: MVILKRRSCRPILAM*MPSMMISPSADSLI
Trigger: GATCAACGAGTCTGCCGAAGGAGAGATCATCATCGATGGCATCAACATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAAGATCACCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp GGAAGCCACGTAGAACCTCTGGACGAAGAAGTAGATGAGGCCAAGGGGCGGGATCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: GSHVEPLDEEVDEAKGRDRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...ATCCCGCCCCTTGGCCTCATCTACTTCTTCGTCCAGAGGTTCTACGTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 2 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 2 (lower is better)
Translates to: LEVMGARSISKTCSPQTSTFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 2 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 2 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSRLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: PEASQRLAVHRLRLERSELASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp GATAACGATGCAGGCACCAATGACGTTGAACAGGGAGCCCATGAACATCTTGATGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 2 (lower is better)
Translates to: DNDAGTNDVEQGAHEHLDDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...ATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTGCATCGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 2 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLSSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: AFRIPLWALTRHLKEQALLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 2 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 2 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGCRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 2 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACCCTGAGCCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 2 (lower is better)
Translates to: RWGAVLLDFSFVQDDHPEPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...CTCAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCT +
Preference number: 2 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLSEAVG*IWSLGS
Trigger: AGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: QRPTRFQTQGELLTISWEKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 2 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATGGGAGTGCAGAGGCTaGCTCTGGCCCAAAACGAGA +
Preference number: 2 (lower is better)
Translates to: AFRIPLWALTRHLKEQALWECRG*LWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: AFRIPLWALTRHLKEQALPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCTGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 2 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCCTGCTGAGCTGTCCATaGGATCTGTGCAAAGGTCTT +
Preference number: 2 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFLLSCP*DLCKGL
Trigger: AAGACCTTTGCACAGATCTCATGGACAGCTCAGCAG...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 2 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGACCTGTTGGCCACGATaGTGGGGTAATAGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: TQRPTRFQTQGELLTISWTCWPR*WGNRPS
Trigger: AGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LEVMGARSISKTCSPQTSRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: AFRIPLWALTRHLKEQALNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCT +
Preference number: 2 (lower is better)
Translates to: TETNTVSNTGRASHYFLGSEAVG*IWSLGS
Trigger: AGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCGGTTTCCATTTCAGATaGCATCCGAACCAGCCAGTT +
Preference number: 2 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFGFHFR*HPNQPV
Trigger: AACTGGCTGGTTCGGATGTCATCTGAAATGGAAACC...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 2 (lower is better)
Translates to: QRPTRFQTQGELLTISWELAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: PEASQRLAVHRLRLERSEDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACAGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 2 (lower is better)
Translates to: QRPTRFQTQGELLTISWEPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 2 (lower is better)
Translates to: TQRPTRFQTQGELLTISWPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 2 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 2 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTACAGGCTTTAAAAGATaGTGCTTCCCTGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: SGPKRELVELALRCWFPATGFKR*CFPVFF
Trigger: GAAGAAAACAGGGAAGCAGCATCTTTTAAAGCCTGT...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: TETNTVSNTGRASHYFLGCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: TQRPTRFQTQGELLTISWCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 2 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 2 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 90 bp AGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTATACAACCAATTCCTCCAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: SPQTSAGEIRGSRLN*VTRIFYTTNSSRSL
Trigger: CAGACTTCTGGAGGAATTGGTTGTATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 2 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 2 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 2 (lower is better)
Translates to: TETNTVSNTGRASHYFLGSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 2 (lower is better)
Translates to: QRPTRFQTQGELLTISWEPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 2 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 2 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 2 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 2 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 2 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCATCAGTCCAGAGGCTaGGCCAATAGTTGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLHQSRG*ANSWKP
Trigger: TGGCTTCCAACTATTGGCTCAGCCTCTGGACTGATG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 2 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLRLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 2 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 2 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGATTGATATTCAAAGATaGGTTCTTTTCGTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: TQRPTRFQTQGELLTISWIDIQR*VLFVSW
Trigger: CCAGGACACGAAAAGAACCCATCTTTGAATATCAAT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 2 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTACAGGCTTTAAAAGATaGTGCTTCCCTGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILTGFKR*CFPVFF
Trigger: GAAGAAAACAGGGAAGCAGCATCTTTTAAAGCCTGT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGATTGATATTCAAAGATaGGTTCTTTTCGTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKIDIQR*VLFVSW
Trigger: CCAGGACACGAAAAGAACCCATCTTTGAATATCAAT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 72 bp CCAGCCGCACGGCCAGCCACCTGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGTTCTCGTCCACCTTCA +
Preference number: 3 (lower is better)
Translates to: PAARPATCWPRC*GNRPSGSRPPS
Trigger: TGAAGGTGGACGAGAACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCGTGCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 3 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEAGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 72 bp TCCACCTTCAGGTCACTCTGGTGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATGACGCTGACCCCCAGC +
Preference number: 3 (lower is better)
Translates to: STFRSLWWMKRS*SSKARMTLTPS
Trigger: GCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CCA 72 bp GGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAG +
Preference number: 3 (lower is better)
Translates to: GRLGLPGVLTPP*ALAYRPCSSDQ
Trigger: CTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 72 bp GTTAGTCCAACCAGGTCCCTTCCAGGAGGACAGGCGTaGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGA +
Preference number: 3 (lower is better)
Translates to: VSPTRSLPGGQA*ECRGCLWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCTGTCCTCCTGGAAGGGACCTGGTTGGACTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 72 bp AGCCCCAGGTGGAACGTCGGCCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGT +
Preference number: 3 (lower is better)
Translates to: SPRWNVGPETIP*PYSSRSRLAVS
Trigger: ACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCACCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 3 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 3 (lower is better)
Translates to: RRGSAEAASGPKRELVELSCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR TCA 72 bp GGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGGCATATAGGCCCTGCA +
Preference number: 3 (lower is better)
Translates to: GFSVGGLVYQGY*LLPGRWHIGPA
Trigger: TGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR GCA 72 bp GCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACACCAAGCCGGCGTCTTT +
Preference number: 3 (lower is better)
Translates to: ALAYRPCSSDQI*QLWGSHQAGVF
Trigger: AAAGACGCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 72 bp GTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGCCAGCTCTGGGGCTCA +
Preference number: 3 (lower is better)
Translates to: VLTPPWALAYRP*SSDQICQLWGS
Trigger: TGAGCCCCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CCA 72 bp CTCTGCTGCAGGAGGTCCGATGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAGACGATCACCCTGAGG +
Preference number: 3 (lower is better)
Translates to: LCCRRSDGAPYS*ISPLSKTITLR
Trigger: CCTCAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 3 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEALEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp AGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 3 (lower is better)
Translates to: RADTKSFRWASSRDVQTSEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...AGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CCA 72 bp GCCTTCTGGTTCTCGTCCACCTTCAGGTCACTCTGGTaGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATG +
Preference number: 3 (lower is better)
Translates to: AFWFSSTFRSLW*MKRSCSSKARM
Trigger: CATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGTGGACGAGAACCAGAAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 3 (lower is better)
Translates to: RRGSAEAASGPKRELVELKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 3 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSLEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 3 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 72 bp CAGCCAGTTCCAGGCAGGGGACCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTGGTTGTCTGGGTTTGG +
Preference number: 3 (lower is better)
Translates to: QPVPGRGPDGGG*CFEYVLVVWVW
Trigger: CCAAACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCTGCCTGGAACTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR GCA 72 bp GGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAG +
Preference number: 3 (lower is better)
Translates to: GPKRELVELALR*WFPAFECLEDQ
Trigger: CTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR GCA 72 bp AGCAAGTCTGAGTCTTGGGGCAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTGGGCTCTAACGAGACA +
Preference number: 3 (lower is better)
Translates to: SKSESWGSLSSG*LPDSTLGSNET
Trigger: TGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 3 (lower is better)
Translates to: SGPKRELVELALRCWFPALPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR GCA 72 bp GAGCTGGCGCTGAGATGCTGGTTCCCAGCTTTTGAGTaGCTGGAAGACCAGATGTTGGTAAGAGGACCATCC +
Preference number: 3 (lower is better)
Translates to: ELALRCWFPAFE*LEDQMLVRGPS
Trigger: GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CCA 72 bp GCTGTAGAAAAGACCTCTCTGCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAA +
Preference number: 3 (lower is better)
Translates to: AVEKTSLLQEVR*GAVLLDFSFVQ
Trigger: TTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTTCTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 3 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 3 (lower is better)
Translates to: SGPKRELVELALRCWFPAKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 3 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 72 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCTGGAGAGATCCGAGGC +
Preference number: 3 (lower is better)
Translates to: LEVMGARSISKT*SPQTSAGEIRG
Trigger: GCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 3 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 3 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 3 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 3 (lower is better)
Translates to: QRPTRFQTQGELLTISWESSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGCAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 3 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp CGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACCCTGAGCCATTGATCGTGACATaGATGTGCCTGAGAACGAAG +
Preference number: 3 (lower is better)
Translates to: RWGAVLLDFSFVQDDHPEPLIVT*MCLRTK
Trigger: CTTCGTTCTCAGGCACATCAATGTCACGATCAATGG...CTCAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 3 (lower is better)
Translates to: TQRPTRFQTQGELLTISWQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 3 (lower is better)
Translates to: AFRIPLWALTRHLKEQALQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 3 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 3 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 3 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILCPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 3 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 3 (lower is better)
Translates to: TQRPTRFQTQGELLTISWKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 3 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLTFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR GCA 72 bp GATCTTCTATACAACCAATTCCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGAAGCACCAGGAAACCA +
Preference number: 3 (lower is better)
Translates to: DLLYNQFLQKSG*QNSSVGSTRKP
Trigger: TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAATTGGTTGTATAGAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCATTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 3 (lower is better)
Translates to: LEVMGARSISKTCSPQTSAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 3 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: PEASQRLAVHRLRLERSEFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: QRPTRFQTQGELLTISWEGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAACAGAACGATGCAGTaGCCCACACACTCCAGCCGC +
Preference number: 3 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLNRTMQ*PTHSSR
Trigger: GCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGTT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 3 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 3 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR TCA 72 bp CACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCTTCTATACAACCAATT +
Preference number: 3 (lower is better)
Translates to: HRLRLERSEAVG*IWSLGSSIQPI
Trigger: AATTGGTTGTATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: TETNTVSNTGRASHYFLGFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: TQRPTRFQTQGELLTISWFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 3 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 3 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 3 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASSTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASCPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCGGAGCCATCGGCGCTaGAGAAGCCCCGGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSRSHRR*RSPGAP
Trigger: TGGCGCTCCGGGGCTTCTGCAGCGCCGATGGCTCCG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASPGASC*AELSPG
Trigger: TCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRSTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTGGCATTCCTCACGGTaGTGCTGTTCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGWHSSR*CCSCPR
Trigger: GCGGGGGCACGAACAGCATCACCGTGAGGAATGCCA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCGCTCCTGGCCCAGGTaGATGTGGCATTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDRSWPR*MWHSSR
Trigger: CCGTGAGGAATGCCACATTCACCTGGGCCAGGAGCG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCGCTCCTGGCCCAGGTaGATGTGGCATTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRSWPR*MWHSSR
Trigger: CCGTGAGGAATGCCACATTCACCTGGGCCAGGAGCG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRPGASC*AELSPG
Trigger: TCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPGASC*AELSPG
Trigger: TCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAPGASC*AELSPG
Trigger: TCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGCTAGGCACACAAGCTaGCGCTGCCCGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGARHTS*RCPTLR
Trigger: CCTCAGTGTCGGGCAGCGCCAGCTTGTGTGCCTAGC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGDHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTGCAGAGGACATGGCTaGAACCCTCGCCGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELCRGHG*NPRRGP
Trigger: GGGGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTGCAGAGGACATGGCTaGAACCCTCGCCGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASCRGHG*NPRRGP
Trigger: GGGGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDSAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACTGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHCPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp GGCGGGATGATGATGGCGGCGATGGGCGTGGCCAGCAGGATAACGATGCAGGCACGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGMMMAAMGVASRITMQARGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...TGCCTGCATCGTTATCCTGCTGGCCACGCCCATCGCCGCCATCATCATCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACGGAGCCATCGGCGCTaGAGAAGCCCCGGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPRSHRR*RSPGAP
Trigger: TGGCGCTCCGGGGCTTCTGCAGCGCCGATGGCTCCG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACGGAGCCATCGGCGCTaGAGAAGCCCCGGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGRSHRR*RSPGAP
Trigger: TGGCGCTCCGGGGCTTCTGCAGCGCCGATGGCTCCG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEAQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTGCAGCAGGTCCACGTaGAGACAGCGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGCSRST*RQREAK
Trigger: CTTGGCTTCCCGCTGTCTGCACGTGGACCTGCTGCA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTGCAGCAGGTCCACGTaGAGACAGCGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDCSRST*RQREAK
Trigger: CTTGGCTTCCCGCTGTCTGCACGTGGACCTGCTGCA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGGAAGCGCTGGACTCTaGGCAGGGATTAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLGSAGL*AGIRVV
Trigger: CACGACCCTAATCCCTGCCCAGAGTCCAGCGCTTCC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLSTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATGGTGTTGAGCCGGTaGGCGATGGTGAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGMVLSR*AMVRTV
Trigger: CACCGTCCTCACCATCGCCCACCGGCTCAACACCAT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GGCGGGATGATGATGGCGGCGATGGGCGTGGCCAGCAGGATAACGATGCAGGCACCTTCTGTGGGGACTTaGCGATCAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GGMMMAAMGVASRITMQAPSVGT*RSKPPP
Trigger: AGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGG...TGCCTGCATCGTTATCCTGCTGGCCACGCCCATCGCCGCCATCATCATCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDTWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDEGAHG*QVGRLL
Trigger: AAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLRSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLCPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACGCTCCTGGCCCAGGTaGATGTGGCATTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPRSWPR*MWHSSR
Trigger: CCGTGAGGAATGCCACATTCACCTGGGCCAGGAGCG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDRGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACAGGAGGAGGAGCTGCTaGGCTGTCTCTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDRRRSC*AVSAVA
Trigger: AGCAACTGCAGAGACAGCTCAGCAGCTCCTCCTCCT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLTFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGTFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCACGGCGATCCCTTGTaGAATGCCCAGGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDHGDPL*NAQGSI
Trigger: TATGGAGCCCTGGGCATTTCACAAGGGATCGCCGTG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGAAGATGCCACATCCTaGCCCTGCAGAGGACATGGC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGEDATS*PCRGHG
Trigger: GCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTTC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCGGAGCCATCGGCGCTaGAGAAGCCCCGGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLRSHRR*RSPGAP
Trigger: TGGCGCTCCGGGGCTTCTGCAGCGCCGATGGCTCCG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTGGGTGACCGCAGGATaGTGTGCAGCAGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWWVTAG*CAAGPR
Trigger: ACGTGGACCTGCTGCACAGCATCCTGCGGTCACCCA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GGCGGGATGATGATGGCGGCGATGGGCGTGGCCAGCAGGATAACGATGCAGGCATGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: GGMMMAAMGVASRITMQAWMKRS*SSKARM
Trigger: CATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCA...TGCCTGCATCGTTATCCTGCTGGCCACGCCCATCGCCGCCATCATCATCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTTGAAGCGGAGGTCGTaGAGGCCGATCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLKRRS*RPILAM
Trigger: CATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGCACACAAGCTGGCGCTaGCCGACACTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELHTSWR*PTLRFS
Trigger: GGAGAACCTCAGTGTCGGGCAGCGCCAGCTTGTGTG...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCACACAAGCTGGCGCTaGCCGACACTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWHTSWR*PTLRFS
Trigger: GGAGAACCTCAGTGTCGGGCAGCGCCAGCTTGTGTG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTGGGAGTGCAGAGGCTaGCTCTGGCCCAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGWECRG*LWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGCTGCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDAAVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGCAGC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399408.7
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGGAAGCGCTGGACTCTaGGCAGGGATTAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWGSAGL*AGIRVV
Trigger: CACGACCCTAATCCCTGCCCAGAGTCCAGCGCTTCC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGVALPV*GLRVIH
Trigger: GTGAATGACACGAAGGCCCCAGACTGGCAGGGCTAC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTGTCCGATCCCCACTaGGCAGGATTTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLSDPH*AGFPGL
Trigger: CAGACCTGGAAATCCTGCCCAGTGGGGATCGGACAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCTGTCCGATCCCCACTaGGCAGGATTTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDLSDPH*AGFPGL
Trigger: CAGACCTGGAAATCCTGCCCAGTGGGGATCGGACAG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGGTAAATGTCAGCGTTaGAGTACACGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLGKCQR*STRPGP
Trigger: TGGCCCGGGCCGTGTACTCCAACGCTGACATTTACC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWLCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLSAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASRPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWRPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGCTAGGCACACAAGCTaGCGCTGCCCGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRARHTS*RCPTLR
Trigger: CCTCAGTGTCGGGCAGCGCCAGCTTGTGTGCCTAGC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDVRMVD*MRSSVS
Trigger: GGAAACGGACGACCTCATCCAGTCCACCATCCGGAC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CCAGTACACGGAAAGCTTGACCTGCCCTGTCTGCGCCTTGTCAGCCTCCATCAGCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PVHGKLDLPCLRLVSLHQLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...CTGATGGAGGCTGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWADHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VTLVDEALLLLEGSNDADDHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDSKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGSKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGCTGGTATTCCACGTaGCATTCCAGTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLCWYST*HSSPRA
Trigger: CGCTCTGGGACTGGAATGTCACGTGGAATACCAGCA...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCCTTCTGTGGGGACTTaGCGATCAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLPSVGT*RSKPPP
Trigger: AGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VTLVDEALLLLEGSNDADSAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWEGAHG*QVGRLL
Trigger: AAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWRSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPCPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSECPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTGGCATTCCTCACGGTaGTGCTGTTCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAWHSSR*CCSCPR
Trigger: GCGGGGGCACGAACAGCATCACCGTGAGGAATGCCA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWRGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAGCTCATGCTGTGCGTaGCCAAGATCCGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGSSCCA*PRSASC
Trigger: ACAAGACGCGGATCTTGGTCACGCACAGCATGAGCT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDCCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEACCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELTFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGGTCACTCTGGTGGATaGAGCGCTCCTGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPGHSGG*SAPAPR
Trigger: TCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGGTCACTCTGGTGGATaGAGCGCTCCTGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAGHSGG*SAPAPR
Trigger: TCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGGTCACTCTGGTGGATaGAGCGCTCCTGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSGHSGG*SAPAPR
Trigger: TCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLLRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDLRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGGATGGTGGACTGGATaGGGTCGTCCGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASGWWTG*GRPFPG
Trigger: ACCTGGAAACGGACGACCTCATCCAGTCCACCATCC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTTCTCCTCTGCATCCTaGTCCTGCTCTGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGFSSAS*SCSVLA
Trigger: TGCCAGCACAGAGCAGGAGCAGGATGCAGAGGAGAA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTTCTCCTCTGCATCCTaGTCCTGCTCTGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDFSSAS*SCSVLA
Trigger: TGCCAGCACAGAGCAGGAGCAGGATGCAGAGGAGAA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTTCTCCTCTGCATCCTaGTCCTGCTCTGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLFSSAS*SCSVLA
Trigger: TGCCAGCACAGAGCAGGAGCAGGATGCAGAGGAGAA...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCCTGCTGAGCTGTCTCTaGAGTTGCTTCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEALLSCL*SCFPAL
Trigger: CAGTGCAGGGAAGCAACTGCAGAGACAGCTCAGCAG...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677164.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCGATCCCTTGTGAAATaGCCAGGGCTCCATAGACGC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRSLVK*PGLHRR
Trigger: GCGTCTATGGAGCCCTGGGCATTTCACAAGGGATCG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGCAGCAGGTCCACGTaGAGACAGCGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWACSRST*RQREAK
Trigger: CTTGGCTTCCCGCTGTCTGCACGTGGACCTGCTGCA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATGGGTGACCGCAGGATaGTGTGCAGCAGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPWVTAG*CAAGPR
Trigger: ACGTGGACCTGCTGCACAGCATCCTGCGGTCACCCA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGGGTGACCGCAGGATaGTGTGCAGCAGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAWVTAG*CAAGPR
Trigger: ACGTGGACCTGCTGCACAGCATCCTGCGGTCACCCA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDWMKRS*SSKARM
Trigger: CATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGWMKRS*SSKARM
Trigger: CATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCACACAAGCTGGCGCTaGCCGACACTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAHTSWR*PTLRFS
Trigger: GGAGAACCTCAGTGTCGGGCAGCGCCAGCTTGTGTG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTGGGAGTGCAGAGGCTaGCTCTGGCCCAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASWECRG*LWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGCTGCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASAAVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGCAGC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399408.7
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCTGTCCGATCCCCACTaGGCAGGATTTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASLSDPH*AGFPGL
Trigger: CAGACCTGGAAATCCTGCCCAGTGGGGATCGGACAG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGGTAAATGTCAGCGTTaGAGTACACGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELGKCQR*STRPGP
Trigger: TGGCCCGGGCCGTGTACTCCAACGCTGACATTTACC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGGTAAATGTCAGCGTTaGAGTACACGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWGKCQR*STRPGP
Trigger: TGGCCCGGGCCGTGTACTCCAACGCTGACATTTACC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPLCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELSAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLTFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDTFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPRPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWARPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPPGASC*AELSPG
Trigger: TCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSSTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGATGCCGACCTTTTCTCCCCCATTGATCGTGACATTGATGTGCCTGAGAACGTCCACTCGGCCCACCTaGGGCCAGCTGCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: TMPTFSPPLIVTLMCLRTSTRPT*GQLLGG
Trigger: TCCGCCCAGCAGCTGGCCCCAGGTGGGCCGAGTGGA...CGTTCTCAGGCACATCAATGTCACGATCAATGGGGGAGAAAAGGTCGGCATCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGGTCCACGGCTGCCGTaGCCTCATCCAACACAAGGA +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRGPRLP*PHPTQG
Trigger: TCCTTGTGTTGGATGAGGCCACGGCAGCCGTGGACC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGATGGTGTTGAGCCGGTaGGCGATGGTGAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAMVLSR*AMVRTV
Trigger: CACCGTCCTCACCATCGCCCACCGGCTCAACACCAT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTATGGTGTTGAGCCGGTaGGCGATGGTGAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRMVLSR*AMVRTV
Trigger: CACCGTCCTCACCATCGCCCACCGGCTCAACACCAT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGTACACGGAAAGCTTGACCTGCCCTGTCTGCGCCTTGTCAGCCTCCATCAGCAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PVHGKLDLPCLRLVSLHQQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...CTGATGGAGGCTGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASSKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 72 bp AGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTGAGGTTCTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: RSDGAPYSWISP*SKTITLRFSPP
Trigger: AGGCGGGGAGAACCTCAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTGCTGGTATTCCACGTaGCATTCCAGTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: RADTKSFRWASSRDVQTSCWYST*HSSPRA
Trigger: CGCTCTGGGACTGGAATGTCACGTGGAATACCAGCA...AGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCTTCTGTGGGGACTTaGCGATCAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPSVGT*RSKPPP
Trigger: AGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPRSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTGGCATTCCTCACGGTaGTGCTGTTCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLWHSSR*CCSCPR
Trigger: GCGGGGGCACGAACAGCATCACCGTGAGGAATGCCA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCGCTCCTGGCCCAGGTaGATGTGGCATTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLRSWPR*MWHSSR
Trigger: CCGTGAGGAATGCCACATTCACCTGGGCCAGGAGCG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAACGCTCCTGGCCCAGGTaGATGTGGCATTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: SSKARMTLTPSKVSLKWERSWPR*MWHSSR
Trigger: CCGTGAGGAATGCCACATTCACCTGGGCCAGGAGCG...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGATGGGCATCCACTGCTaGGAGGGGATCATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWMGIHC*EGIIEE
Trigger: CTCTTCGATGATCCCCTCTCAGCAGTGGATGCCCAT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCATGGGCATCCACTGCTaGGAGGGGATCATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASMGIHC*EGIIEE
Trigger: CTCTTCGATGATCCCCTCTCAGCAGTGGATGCCCAT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAGGAGGAGGAGCTGCTaGGCTGTCTCTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRRRRSC*AVSAVA
Trigger: AGCAACTGCAGAGACAGCTCAGCAGCTCCTCCTCCT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGAGGAGGAGGAGCTGCTaGGCTGTCTCTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWARRRSC*AVSAVA
Trigger: AGCAACTGCAGAGACAGCTCAGCAGCTCCTCCTCCT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPTFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: CGAVVVPADVPTIGGGAATFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCACGGCGATCCCTTGTaGAATGCCCAGGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAHGDPL*NAQGSI
Trigger: TATGGAGCCCTGGGCATTTCACAAGGGATCGCCGTG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTCTCTGAATACTCCTTaGGCCTCTCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSLNTP*ASPRPR
Trigger: TCGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASLRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGGATGGTGGACTGGATaGGGTCGTCCGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPGWWTG*GRPFPG
Trigger: ACCTGGAAACGGACGACCTCATCCAGTCCACCATCC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAAGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSKARMTLTPSKVSLKWEVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDLVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCCTGCTCCTGCTCTGTaGTGGCATAGGTACGCAGGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAPAPAL*WHRYAG
Trigger: TCCTGCGTACCTATGCCAGCACAGAGCAGGAGCAGG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTTCTCCTCTGCATCCTaGTCCTGCTCTGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELFSSAS*SCSVLA
Trigger: TGCCAGCACAGAGCAGGAGCAGGATGCAGAGGAGAA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTTCTCCTCTGCATCCTaGTCCTGCTCTGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASFSSAS*SCSVLA
Trigger: TGCCAGCACAGAGCAGGAGCAGGATGCAGAGGAGAA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGACCCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRDPVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGGGTC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCTGCTGAGCTGTCTCTaGAGTTGCTTCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWLLSCL*SCFPAL
Trigger: CAGTGCAGGGAAGCAACTGCAGAGACAGCTCAGCAG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASTESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASWMKRS*SSKARM
Trigger: CATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACACCTGTTGGCCACGATaGTGGGGTAATAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDTCWPR*WGNRPS
Trigger: AGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WSSLSGRADTKSFRWASSAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...GGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTTGAAGCGGAGGTCGTaGAGGCCGATCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWALKRRS*RPILAM
Trigger: CATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCACACAAGCTGGCGCTaGCCGACACTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAHTSWR*PTLRFS
Trigger: GGAGAACCTCAGTGTCGGGCAGCGCCAGCTTGTGTG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLSSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTGGGAGTGCAGAGGCTaGCTCTGGCCCAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSWECRG*LWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGGGAGTGCAGAGGCTaGCTCTGGCCCAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAWECRG*LWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGCTGCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAAAVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGCAGC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399408.7
ENST00000621659.2
ENST00000622828.3
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCGTCCATCACTGTGCTaGCGTTCTCCTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASRPSLC*RSPLHP
Trigger: AGGATGCAGAGGAGAACGGCAGCACAGTGATGGACG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399408.7
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGCTGACCAGAAACACTaGGGCCAGGAATATGCCCCG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRADQKH*GQEYAP
Trigger: CGGGGCATATTCCTGGCCCCAGTGTTTCTGGTCAGC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGATGCCCAAGAGAGTTaGGCTGACCAGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGDAQES*ADQKHW
Trigger: CCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCAGGGATTAGGGTCGTaGATGGTTTCCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLQGLGS*MVSENR
Trigger: CCTGTTCTCGGAAACCATCCACGACCCTAATCCCTG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCAGGGATTAGGGTCGTaGATGGTTTCCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGQGLGS*MVSENR
Trigger: CCTGTTCTCGGAAACCATCCACGACCCTAATCCCTG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCATTCGCATCCACCTTaGAACTCTCTTTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGHSHPP*NSLSAG
Trigger: CCCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCATTCGCATCCACCTTaGAACTCTCTTTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDHSHPP*NSLSAG
Trigger: CCCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCAGATGTGGAAGTACTaGTGCAGCACGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASQMWKY*CSTRVC
Trigger: GCAGACCCTCGTGCTGCACCAGTACTTCCACATCTG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGGTAAATGTCAGCGTTaGAGTACACGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPGKCQR*STRPGP
Trigger: TGGCCCGGGCCGTGTACTCCAACGCTGACATTTACC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGCTCCTGCTCTGTGCTaGCATAGGTACGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWAPALC*HRYAGT
Trigger: AGTTCCTGCGTACCTATGCCAGCACAGAGCAGGAGC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPARPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGRPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDRVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGCTAGGCACACAAGCTaGCGCTGCCCGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPARHTS*RCPTLR
Trigger: CCTCAGTGTCGGGCAGCGCCAGCTTGTGTGCCTAGC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGCTAGGCACACAAGCTaGCGCTGCCCGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGARHTS*RCPTLR
Trigger: CCTCAGTGTCGGGCAGCGCCAGCTTGTGTGCCTAGC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGTCCACGGCTGCCGTaGCCTCATCCAACACAAGGA +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGGPRLP*PHPTQG
Trigger: TCCTTGTGTTGGATGAGGCCACGGCAGCCGTGGACC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAVRMVD*MRSSVS
Trigger: GGAAACGGACGACCTCATCCAGTCCACCATCCGGAC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEARVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGDHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWCRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELCRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGAGGGAAGCCCCAGGTaGAACGTCGGCCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLEGSPR*NVGPET
Trigger: TGTCTCAGGGCCGACGTTCCACCTGGGGCTTCCCTC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGTGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAAGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: SSKARMTLTPSKVSLKWEGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRSKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CGAVVVPADVPTIGGGAASKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATGCTGGTATTCCACGTaGCATTCCAGTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPCWYST*HSSPRA
Trigger: CGCTCTGGGACTGGAATGTCACGTGGAATACCAGCA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCCAAGAGAGTTGGGCTaGCCAGAAACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAPRELG*PETLGP
Trigger: TGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTTCTGGCTGAATTGGTaGTCACCAGGGCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELFWLNW*SPGPSD
Trigger: ATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGGAGGATTTTCTGGCTaGATTGGTGATCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASGGFSG*IGDHQG
Trigger: GCCCTGGTGATCACCAATTCAGCCAGAAAATCCTCC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGGAGGATTTTCTGGCTaGATTGGTGATCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWGGFSG*IGDHQG
Trigger: GCCCTGGTGATCACCAATTCAGCCAGAAAATCCTCC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGEGAHG*QVGRLL
Trigger: AAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSCPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTGGCATTCCTCACGGTaGTGCTGTTCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPWHSSR*CCSCPR
Trigger: GCGGGGGCACGAACAGCATCACCGTGAGGAATGCCA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTGGCATTCCTCACGGTaGTGCTGTTCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLWHSSR*CCSCPR
Trigger: GCGGGGGCACGAACAGCATCACCGTGAGGAATGCCA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCGCTCCTGGCCCAGGTaGATGTGGCATTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVRSWPR*MWHSSR
Trigger: CCGTGAGGAATGCCACATTCACCTGGGCCAGGAGCG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACGGAGAGAATCATTCTaGATCCAGGCCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPRRESF*IQACCG
Trigger: GCCACAGCAGGCCTGGATTCAGAATGATTCTCTCCG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGATGGGCATCCACTGCTaGGAGGGGATCATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAMGIHC*EGIIEE
Trigger: CTCTTCGATGATCCCCTCTCAGCAGTGGATGCCCAT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGAGCTCATGCTGTGCGTaGCCAAGATCCGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASSCCA*PRSASC
Trigger: ACAAGACGCGGATCTTGGTCACGCACAGCATGAGCT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWACCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRCCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGCATCAGTCCAGAGGCTaGGCCAATAGTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELHQSRG*ANSWKP
Trigger: TGGCTTCCAACTATTGGCTCAGCCTCTGGACTGATG...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCATCAGTCCAGAGGCTaGGCCAATAGTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWHQSRG*ANSWKP
Trigger: TGGCTTCCAACTATTGGCTCAGCCTCTGGACTGATG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGTCACTCTGGTGGATaGAGCGCTCCTGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLGHSGG*SAPAPR
Trigger: TCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGGTCACTCTGGTGGATaGAGCGCTCCTGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPGHSGG*SAPAPR
Trigger: TCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTCTCTGAATACTCCTTaGGCCTCTCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRSLNTP*ASPRPR
Trigger: TCGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRLRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCATCCGAGTACTGGCTaGATGGGTCCAGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWHPSTG*MGPGSF
Trigger: GAATGAACCTGGACCCATTCAGCCAGTACTCGGATG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSLVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWALVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CGAVVVPADVPTIGGGAALVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATTCTCCTCTGCATCCTaGTCCTGCTCTGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPFSSAS*SCSVLA
Trigger: TGCCAGCACAGAGCAGGAGCAGGATGCAGAGGAGAA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGACCCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGDPVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGGGTC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATGACCCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHDPVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGGGTC...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGAGCTGTCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASCLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRTESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWATESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: WSSLSGRADTKSFRWASSTESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...GGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACCGATCCCTTGTGAAATaGCCAGGGCTCCATAGACGC +
Preference number: 4 (lower is better)
Translates to: VTLVDEALLLLEGSNDADRSLVK*PGLHRR
Trigger: GCGTCTATGGAGCCCTGGGCATTTCACAAGGGATCG...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGACCTGTTGGCCACGATaGTGGGGTAATAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWTCWPR*WGNRPS
Trigger: AGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCTTGAAGCGGAGGTCGTaGAGGCCGATCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLKRRS*RPILAM
Trigger: CATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCGGCGTCTTTGGCCATaGTGTAGAAAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLRRLWP*CRKDLS
Trigger: AGAGAGGTCTTTTCTACAGCATGGCCAAAGACGCCG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCGGCGTCTTTGGCCATaGTGTAGAAAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRRLWP*CRKDLS
Trigger: AGAGAGGTCTTTTCTACAGCATGGCCAAAGACGCCG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWALQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCGTCCATCACTGTGCTaGCGTTCTCCTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWARPSLC*RSPLHP
Trigger: AGGATGCAGAGGAGAACGGCAGCACAGTGATGGACG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399408.7
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTTTTGGATCTCAGGATaGCTAGGGCACACACTAGGG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDFWISG*LGHTLG
Trigger: CCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGGAAGCGCTGGACTCTaGGCAGGGATTAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPGSAGL*AGIRVV
Trigger: CACGACCCTAATCCCTGCCCAGAGTCCAGCGCTTCC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGCATTCGCATCCACCTTaGAACTCTCTTTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELHSHPP*NSLSAG
Trigger: CCCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATG...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCATTCGCATCCACCTTaGAACTCTCTTTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWHSHPP*NSLSAG
Trigger: CCCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGVALPV*GLRVIH
Trigger: GTGAATGACACGAAGGCCCCAGACTGGCAGGGCTAC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCAGATGTGGAAGTACTaGTGCAGCACGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAQMWKY*CSTRVC
Trigger: GCAGACCCTCGTGCTGCACCAGTACTTCCACATCTG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACCAGATGTGGAAGTACTaGTGCAGCACGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VTLVDEALLLLEGSNDADQMWKY*CSTRVC
Trigger: GCAGACCCTCGTGCTGCACCAGTACTTCCACATCTG...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCTGACGAAGCAGATGTaGAAGTACTGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWLTKQM*KYWCST
Trigger: CGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGCACGGACCTGTAATATaGTTCCTCCAGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLHGPVI*FLQLTS
Trigger: GGATGTCAGCTGGAGGAACCATATTACAGGTCCGTG...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGCTCCTGCTCTGTGCTaGCATAGGTACGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSAPALC*HRYAGT
Trigger: AGTTCCTGCGTACCTATGCCAGCACAGAGCAGGAGC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPASAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CGAVVVPADVPTIGGGAATFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSPGASC*AELSPG
Trigger: TCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLSSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GGCGGGATGATGATGGCGGCGATGGGCGTGGCCAGCAGGATAACGATGCAGGCACCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGMMMAAMGVASRITMQAPSAHS*SSLSGR
Trigger: CCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG...TGCCTGCATCGTTATCCTGCTGGCCACGCCCATCGCCGCCATCATCATCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGATGGTGTTGAGCCGGTaGGCGATGGTGAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLMVLSR*AMVRTV
Trigger: CACCGTCCTCACCATCGCCCACCGGCTCAACACCAT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAATGGTGTTGAGCCGGTaGGCGATGGTGAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGMVLSR*AMVRTV
Trigger: CACCGTCCTCACCATCGCCCACCGGCTCAACACCAT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPGAPYS*ISPLSK
Trigger: CTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAGAPYS*ISPLSK
Trigger: CTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: VTLVDEALLLLEGSNDADGAPYS*ISPLSK
Trigger: CTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCC...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCCAAGCCGGCGTCTTTaGCCATGCTGTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASPSRRL*PCCRKD
Trigger: GTCTTTTCTACAGCATGGCCAAAGACGCCGGCTTGG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEDHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGAGGGAAGCCCCAGGTaGAACGTCGGCCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEEGSPR*NVGPET
Trigger: TGTCTCAGGGCCGACGTTCCACCTGGGGCTTCCCTC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGAGGGAAGCCCCAGGTaGAACGTCGGCCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLEGSPR*NVGPET
Trigger: TGTCTCAGGGCCGACGTTCCACCTGGGGCTTCCCTC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGGAGTCGGGGTGGGTaGGGAGGGAAGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEWSRGG*GGKPQV
Trigger: CACCTGGGGCTTCCCTCCCCACCCACCCCGACTCCA...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTGCTGGTATTCCACGTaGCATTCCAGTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPACWYST*HSSPRA
Trigger: CGCTCTGGGACTGGAATGTCACGTGGAATACCAGCA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAACGAGGACCGTGTTCTaGAAGCACTTGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPTRTVF*KHLVKS
Trigger: CGACTTCACCAAGTGCTTTCAGAACACGGTCCTCGT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCACGAGGACCGTGTTCTaGAAGCACTTGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSTRTVF*KHLVKS
Trigger: CGACTTCACCAAGTGCTTTCAGAACACGGTCCTCGT...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGGACAAGACGAGCTaGATGAGTAAGAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDQDKTS*MSKREK
Trigger: CTTTTCCCTCTTACTCATTCAGCTCGTCTTGTCCTG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATTCTGGCTGAATTGGTaGTCACCAGGGCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPFWLNW*SPGPSD
Trigger: ATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGGAGGATTTTCTGGCTaGATTGGTGATCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPGGFSG*IGDHQG
Trigger: GCCCTGGTGATCACCAATTCAGCCAGAAAATCCTCC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACGGAGGATTTTCTGGCTaGATTGGTGATCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: VTLVDEALLLLEGSNDADGGFSG*IGDHQG
Trigger: GCCCTGGTGATCACCAATTCAGCCAGAAAATCCTCC...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGTWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPSAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGAAACCGGAGGATGTTaGACAAGGCCAAAGACACGA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWETGGC*TRPKTR
Trigger: TCGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALCPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTGGCATTCCTCACGGTaGTGCTGTTCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSWHSSR*CCSCPR
Trigger: GCGGGGGCACGAACAGCATCACCGTGAGGAATGCCA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCGCTCCTGGCCCAGGTaGATGTGGCATTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRRSWPR*MWHSSR
Trigger: CCGTGAGGAATGCCACATTCACCTGGGCCAGGAGCG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCGGAGAGAATCATTCTaGATCCAGGCCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGRRESF*IQACCG
Trigger: GCCACAGCAGGCCTGGATTCAGAATGATTCTCTCCG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGTFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGGTCACTCTGGTGGATaGAGCGCTCCTGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLGHSGG*SAPAPR
Trigger: TCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTCTCTGAATACTCCTTaGGCCTCTCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPASLNTP*ASPRPR
Trigger: TCGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCTCTCTGAATACTCCTTaGGCCTCTCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGSLNTP*ASPRPR
Trigger: TCGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGA...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGCTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCATCCGAGTACTGGCTaGATGGGTCCAGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSHPSTG*MGPGSF
Trigger: GAATGAACCTGGACCCATTCAGCCAGTACTCGGATG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCATCCGAGTACTGGCTaGATGGGTCCAGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAHPSTG*MGPGSF
Trigger: GAATGAACCTGGACCCATTCAGCCAGTACTCGGATG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGGATGGTGGACTGGATaGGGTCGTCCGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGGWWTG*GRPFPG
Trigger: ACCTGGAAACGGACGACCTCATCCAGTCCACCATCC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGATGGTGGACTGGATaGGGTCGTCCGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLGWWTG*GRPFPG
Trigger: ACCTGGAAACGGACGACCTCATCCAGTCCACCATCC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGGTTTACCAGGGGTACTaGCTCCTCCCTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLVYQGY*LLPGRW
Trigger: CCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAAC...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSLVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTCTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: CGAVVVPADVPTIGGGAALVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGTGGAACGTCGGCCCTaGGACAATCCCCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRVERRP*DNPLAL
Trigger: TAGGGCCAGGGGATTGTCTCAGGGCCGACGTTCCAC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTAGGAGGAGGAGCTGCTaGGCTGTCCATGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPARRRSC*AVHEIC
Trigger: ACAGATCTCATGGACAGCTCAGCAGCTCCTCCTCCT...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCCCTTGATAGCCACGTaGCCCTCCACTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGPLIAT*PSTLSI
Trigger: GATGGACAAAGTGGAGGGGCACGTGGCTATCAAGGG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR GCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTGTCCGTCACCAGCATaGCATTCTCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGCPSPA*HSPFAL
Trigger: CAAAGCAAATGGAGAATGGCATGCTGGTGACGGACA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCGATCCCTTGTGAAATaGCCAGGGCTCCATAGACGC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGRSLVK*PGLHRR
Trigger: GCGTCTATGGAGCCCTGGGCATTTCACAAGGGATCG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTGCAGCAGGTCCACGTaGAGACAGCGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSECSRST*RQREAK
Trigger: CTTGGCTTCCCGCTGTCTGCACGTGGACCTGCTGCA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTGGGTGACCGCAGGATaGTGTGCAGCAGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLWVTAG*CAAGPR
Trigger: ACGTGGACCTGCTGCACAGCATCCTGCGGTCACCCA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGATCGTGACATTGATGTaGCTGAGAACGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLIVTLM*LRTKSR
Trigger: CCTGGACTTCGTTCTCAGGCACATCAATGTCACGAT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATTGAAGCGGAGGTCGTaGAGGCCGATCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGLKRRS*RPILAM
Trigger: CATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCACACAAGCTGGCGCTaGCCGACACTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVHTSWR*PTLRFS
Trigger: GGAGAACCTCAGTGTCGGGCAGCGCCAGCTTGTGTG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSSSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GGAAGCCACGTAGAACCTCTGGACGAAGAAGTAGATGAGGCCAAGGGGCGGGATGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GSHVEPLDEEVDEAKGRDELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...ATCCCGCCCCTTGGCCTCATCTACTTCTTCGTCCAGAGGTTCTACGTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGCTGACCAGAAACACTaGGGCCAGGAATATGCCCCG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPADQKH*GQEYAP
Trigger: CGGGGCATATTCCTGGCCCCAGTGTTTCTGGTCAGC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCGAAACAGGTCCACCTaGGCATCCTCTTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASRNRST*ASSFKA
Trigger: AGCCTTAAAAGAGGATGCCCAGGTGGACCTGTTTCG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCAGGGATTAGGGTCGTaGATGGTTTCCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSQGLGS*MVSENR
Trigger: CCTGTTCTCGGAAACCATCCACGACCCTAATCCCTG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACAGGGATTAGGGTCGTaGATGGTTTCCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPQGLGS*MVSENR
Trigger: CCTGTTCTCGGAAACCATCCACGACCCTAATCCCTG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGGAAGCGCTGGACTCTaGGCAGGGATTAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVGSAGL*AGIRVV
Trigger: CACGACCCTAATCCCTGCCCAGAGTCCAGCGCTTCC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCAGATGTGGAAGTACTaGTGCAGCACGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAQMWKY*CSTRVC
Trigger: GCAGACCCTCGTGCTGCACCAGTACTTCCACATCTG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGACGAAGCAGATGTaGAAGTACTGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWALTKQM*KYWCST
Trigger: CGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRDTKAV*ASRMLF
Trigger: GAACAACATCCTGGATGCCCAGACAGCCTTCGTGTC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCACGGACCTGTAATATaGTTCCTCCAGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASHGPVI*FLQLTS
Trigger: GGATGTCAGCTGGAGGAACCATATTACAGGTCCGTG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTGTCCGATCCCCACTaGGCAGGATTTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPLSDPH*AGFPGL
Trigger: CAGACCTGGAAATCCTGCCCAGTGGGGATCGGACAG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTCCTGCTCTGTGCTaGCATAGGTACGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGAPALC*HRYAGT
Trigger: AGTTCCTGCGTACCTATGCCAGCACAGAGCAGGAGC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVLCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLLCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCTTCAGGTCACTCTGGTaGATGAAGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGFRSLW*MKRSCS
Trigger: GGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAA...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSCWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWACWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCCCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEAPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWARVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRRVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGTACACGGAAAGCTTGACCTGCCCTGTCTGCGCCTTGTCAGCCTCCATCAGCGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: PVHGKLDLPCLRLVSLHQRVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...CTGATGGAGGCTGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RADTKSFRWASSRDVQTSSSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...AGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGGTCCACGGCTGCCGTaGCCTCATCCAACACAAGGA +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPGPRLP*PHPTQG
Trigger: TCCTTGTGTTGGATGAGGCCACGGCAGCCGTGGACC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPVRMVD*MRSSVS
Trigger: GGAAACGGACGACCTCATCCAGTCCACCATCCGGAC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAGAPYS*ISPLSK
Trigger: CTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGGAPYS*ISPLSK
Trigger: CTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGACCATCCAGGGCCCTaGGACACTGCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRDHPGP*DTAKGR
Trigger: TCTCCCCTTGGCAGTGTCCCAGGGCCCTGGATGGTC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAACCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSKARMTLTPSKVSLKWEPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTTCCGGATTCCACTTTaGGCTCTAACGAGACACCTT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDFRIPL*ALTRHL
Trigger: AAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGGGCAGCCTCAGCTCTaGCTGCCTTCCGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGGQPQL*LPSGFH
Trigger: GTGGAATCCGGAAGGCAGCCAGAGCTGAGGCTGCCC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 72 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGGGCCCTGGGACACTGC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQM*VRGPSRALGHC
Trigger: GCAGTGTCCCAGGGCCCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTCTGAAAGCACTTGGTaGAGTCGGGGTTGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSSESTW*SRGCWY
Trigger: ATACCAGCAACCCCGACTTCACCAAGTGCTTTCAGA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATACGAGGACCGTGTTCTaGAAGCACTTGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHTRTVF*KHLVKS
Trigger: CGACTTCACCAAGTGCTTTCAGAACACGGTCCTCGT...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCCAAGAGAGTTGGGCTaGCCAGAAACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLPRELG*PETLGP
Trigger: TGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTTCCTCCTCTCCAGCTaGATTAAAAAGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDFLLSS*IKKVAS
Trigger: GCTTGCTACCTTTTTAATTCAGCTGGAGAGGAGGAA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACAGTAGACGTAGAAAGTaGTGTCACGAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDSRRRK*CHETGP
Trigger: TGGACCTGTTTCGTGACATCACTTTCTACGTCTACT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCCTTCTGTGGGGACTTaGCGATCAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLPSVGT*RSKPPP
Trigger: AGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVTWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSETWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVEGAHG*QVGRLL
Trigger: AAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEEGAHG*QVGRLL
Trigger: AAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAAACCGGAGGATGTTaGACAAGGCCAAAGACACGA +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRETGGC*TRPKTR
Trigger: TCGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTC...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGAAACCGGAGGATGTTaGACAAGGCCAAAGACACGA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAETGGC*TRPKTR
Trigger: TCGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSERSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTGGCATTCCTCACGGTaGTGCTGTTCGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSWHSSR*CCSCPR
Trigger: GCGGGGGCACGAACAGCATCACCGTGAGGAATGCCA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSERGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVRGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAAGCTCATGCTGTGCGTaGCCAAGATCCGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPSSCCA*PRSASC
Trigger: ACAAGACGCGGATCTTGGTCACGCACAGCATGAGCT...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCATCAGTCCAGAGGCTaGGCCAATAGTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGHQSRG*ANSWKP
Trigger: TGGCTTCCAACTATTGGCTCAGCCTCTGGACTGATG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTACTTTCGTGTGCTCCTaGGTCCCGTTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVTFVCS*VPLTMG
Trigger: CCCCATCGTCAACGGGACTCAGGAGCACACGAAAGT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCACGGCGATCCCTTGTaGAATGCCCAGGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEHGDPL*NAQGSI
Trigger: TATGGAGCCCTGGGCATTTCACAAGGGATCGCCGTG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGGTTTCCATTTCAGATaGCATCCGAACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASGFHFR*HPNQPV
Trigger: AACTGGCTGGTTCGGATGTCATCTGAAATGGAAACC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGGTTTCCATTTCAGATaGCATCCGAACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWGFHFR*HPNQPV
Trigger: AACTGGCTGGTTCGGATGTCATCTGAAATGGAAACC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPLVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGGATGGTGGACTGGATaGGGTCGTCCGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVGWWTG*GRPFPG
Trigger: ACCTGGAAACGGACGACCTCATCCAGTCCACCATCC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGAAGATGCCACATCCTaGCCCTGCAGAGGACATGGC +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEEDATS*PCRGHG
Trigger: GCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTTC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCGGAGCCATCGGCGCTaGAGAAGCCCCGGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILRSHRR*RSPGAP
Trigger: TGGCGCTCCGGGGCTTCTGCAGCGCCGATGGCTCCG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACAGCAACTTTAAGATCTaGGGCCCGGAAAACATCATC +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDSNFKI*GPENII
Trigger: GATGATGTTTTCCGGGCCGCAGATCTTAAAGTTGCT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCCTGCTCCTGCTCTGTaGTGGCATAGGTACGCAGGA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEPAPAL*WHRYAG
Trigger: TCCTGCGTACCTATGCCAGCACAGAGCAGGAGCAGG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTGTCCGTCACCAGCATaGCATTCTCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWCPSPA*HSPFAL
Trigger: CAAAGCAAATGGAGAATGGCATGCTGGTGACGGACA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAAGCTGTCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGSCLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCTTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLTESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTGCAGCAGGTCCACGTaGAGACAGCGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRCSRST*RQREAK
Trigger: CTTGGCTTCCCGCTGTCTGCACGTGGACCTGCTGCA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACACCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTTGAAGCGGAGGTCGTaGAGGCCGATCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSELKRRS*RPILAM
Trigger: CATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCGGCGTCTTTGGCCATaGTGTAGAAAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRRRLWP*CRKDLS
Trigger: AGAGAGGTCTTTTCTACAGCATGGCCAAAGACGCCG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACGGCGTCTTTGGCCATaGTGTAGAAAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPRRLWP*CRKDLS
Trigger: AGAGAGGTCTTTTCTACAGCATGGCCAAAGACGCCG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGSSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPASSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACATGGGAGTGCAGAGGCTaGCTCTGGCCCAAAACGAGA +
Preference number: 4 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTWECRG*LWPKTR
Trigger: TCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCA...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCTGACCAGAAACACTaGGGCCAGGAATATGCCCCG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEADQKH*GQEYAP
Trigger: CGGGGCATATTCCTGGCCCCAGTGTTTCTGGTCAGC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGCTGACCAGAAACACTaGGGCCAGGAATATGCCCCG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPADQKH*GQEYAP
Trigger: CGGGGCATATTCCTGGCCCCAGTGTTTCTGGTCAGC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGATGCCCAAGAGAGTTaGGCTGACCAGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPADAQES*ADQKHW
Trigger: CCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGATGCCCAAGAGAGTTaGGCTGACCAGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGDAQES*ADQKHW
Trigger: CCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTTTTGGATCTCAGGATaGCTAGGGCACACACTAGGG +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSFWISG*LGHTLG
Trigger: CCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCGAAACAGGTCCACCTaGGCATCCTCTTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRRNRST*ASSFKA
Trigger: AGCCTTAAAAGAGGATGCCCAGGTGGACCTGTTTCG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTCGAAACAGGTCCACCTaGGCATCCTCTTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: CGAVVVPADVPTIGGGAARNRST*ASSFKA
Trigger: AGCCTTAAAAGAGGATGCCCAGGTGGACCTGTTTCG...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCAGGGATTAGGGTCGTaGATGGTTTCCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGQGLGS*MVSENR
Trigger: CCTGTTCTCGGAAACCATCCACGACCCTAATCCCTG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEANIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACAGATGTGGAAGTACTaGTGCAGCACGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGQMWKY*CSTRVC
Trigger: GCAGACCCTCGTGCTGCACCAGTACTTCCACATCTG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGTACACGGAAAGCTTGACCTGCCCTGTCTGCGCCTTGTCAGCCTCCATCAGCCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: PVHGKLDLPCLRLVSLHQPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...CTGATGGAGGCTGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GGAAGCCACGTAGAACCTCTGGACGAAGAAGTAGATGAGGCCAAGGGGCGGGATGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GSHVEPLDEEVDEAKGRDGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...ATCCCGCCCCTTGGCCTCATCTACTTCTTCGTCCAGAGGTTCTACGTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCTCTTCAGCATCCCCTTaGGGCCAATCACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGSSASP*GQSHFQ
Trigger: TTGAAAATGTGATTGGCCCCAAGGGGATGCTGAAGA...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGCTCCTGCTCTGTGCTaGCATAGGTACGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPAPALC*HRYAGT
Trigger: AGTTCCTGCGTACCTATGCCAGCACAGAGCAGGAGC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLLCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVSAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSERWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATTCAGGTCACTCTGGTaGATGAAGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGFRSLW*MKRSCS
Trigger: GGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLTFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAACAAAACAGGGTCCTaGGGGATGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWNKTGS*GMMVIL
Trigger: CAAGATCACCATCATCCCCCAGGACCCTGTTTTGTT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGAACAAAACAGGGTCCTaGGGGATGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELNKTGS*GMMVIL
Trigger: CAAGATCACCATCATCCCCCAGGACCCTGTTTTGTT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPSSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPSAHS*SSLSGR
Trigger: CCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTAGGCACACAAGCTaGCGCTGCCCGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSARHTS*RCPTLR
Trigger: CCTCAGTGTCGGGCAGCGCCAGCTTGTGTGCCTAGC...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGGTCCACGGCTGCCGTaGCCTCATCCAACACAAGGA +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGGPRLP*PHPTQG
Trigger: TCCTTGTGTTGGATGAGGCCACGGCAGCCGTGGACC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEVRMVD*MRSSVS
Trigger: GGAAACGGACGACCTCATCCAGTCCACCATCCGGAC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVVRMVD*MRSSVS
Trigger: GGAAACGGACGACCTCATCCAGTCCACCATCCGGAC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATGGTGTTGAGCCGGTaGGCGATGGTGAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGMVLSR*AMVRTV
Trigger: CACCGTCCTCACCATCGCCCACCGGCTCAACACCAT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWACACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLCRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCCTGAGACAATCCCCTaGCCCTACAGTTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPPETIP*PYSSRS
Trigger: GGACCTGGAACTGTAGGGCCAGGGGATTGTCTCAGG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 72 bp TTGAAGCGGAGGTCGTGCAGGCCGATCTTGGCGATGTaGATGCCATCGATGATGATCTCTCCTTCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LKRRSCRPILAM*MPSMMISPSAD
Trigger: GTCTGCCGAAGGAGAGATCATCATCGATGGCATCAACATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCTCTGAAAGCACTTGGTaGAGTCGGGGTTGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGSESTW*SRGCWY
Trigger: ATACCAGCAACCCCGACTTCACCAAGTGCTTTCAGA...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCAGTGAGCATGATCCCTaGAGACTGAACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGSEHDP*RLNSLP
Trigger: AGGAAGGGAGTTCAGTCTTCAGGGATCATGCTCACT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCCTTCTGTGGGGACTTaGCGATCAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVPSVGT*RSKPPP
Trigger: AGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGTWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGATGCCGACCTTTTCTCCCCCATTGATCGTGACATTGATGTGCCTGAGAACGACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: TMPTFSPPLIVTLMCLRTTWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...CGTTCTCAGGCACATCAATGTCACGATCAATGGGGGAGAAAAGGTCGGCATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTTTCGTTCATCAGCTTaGTCCGATTGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDFRSSA*SDCLCS
Trigger: AGAGCAAAGACAATCGGATCAAGCTGATGAACGAAA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGRSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTGCCCCCGCCGTCTTTaGCAGGCCGTCGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILCPRRL*QAVARC
Trigger: GCATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCGGAGAGAATCATTCTaGATCCAGGCCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLRRESF*IQACCG
Trigger: GCCACAGCAGGCCTGGATTCAGAATGATTCTCTCCG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGATGGGCATCCACTGCTaGGAGGGGATCATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEMGIHC*EGIIEE
Trigger: CTCTTCGATGATCCCCTCTCAGCAGTGGATGCCCAT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR TCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGAGGAGGAGCTGCTaGGCTGTCTCTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSRRRSC*AVSAVA
Trigger: AGCAACTGCAGAGACAGCTCAGCAGCTCCTCCTCCT...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVCCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACATCAGTCCAGAGGCTaGGCCAATAGTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPHQSRG*ANSWKP
Trigger: TGGCTTCCAACTATTGGCTCAGCCTCTGGACTGATG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGGTCACTCTGGTGGATaGAGCGCTCCTGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGGHSGG*SAPAPR
Trigger: TCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGACC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGTACACGGAAAGCTTGACCTGCCCTGTCTGCGCCTTGTCAGCCTCCATCAGGGTTTCCATTTCAGATaGCATCCGAACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PVHGKLDLPCLRLVSLHQGFHFR*HPNQPV
Trigger: AACTGGCTGGTTCGGATGTCATCTGAAATGGAAACC...CTGATGGAGGCTGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVLRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSELRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCATCCGAGTACTGGCTaGATGGGTCCAGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLHPSTG*MGPGSF
Trigger: GAATGAACCTGGACCCATTCAGCCAGTACTCGGATG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWARWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCCACTAAACCCCATCTaGCTAGTGATCTCTACAACT +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASPLNPI*LVISTT
Trigger: AGTTGTAGAGATCACTAGTCAGATGGGGTTTAGTGG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTAGCTCATGCTGTGCGTaGCCAAGATCCGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVSSCCA*PRSASS
Trigger: AGAAGACGCGGATCTTGGTCACGCACAGCATGAGCT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGAGAGTAGAAGAGGTCTaGCCAGCAGACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLRVEEV*PADDPQ
Trigger: CTGTGGATCGTCTGCTGGGCAGACCTCTTCTACTCT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAGCAACTTTAAGATCTaGGGCCCGGAAAACATCATC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSNFKI*GPENII
Trigger: GATGATGTTTTCCGGGCCGCAGATCTTAAAGTTGCT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCAGCAACTTTAAGATCTaGGGCCCGGAAAACATCATC +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASSNFKI*GPENII
Trigger: GATGATGTTTTCCGGGCCGCAGATCTTAAAGTTGCT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCCCTTGATAGCCACGTaGCCCTCCACTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVPLIAT*PSTLSI
Trigger: GATGGACAAAGTGGAGGGGCACGTGGCTATCAAGGG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCCTGCTCCTGCTCTGTaGTGGCATAGGTACGCAGGA +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSPAPAL*WHRYAG
Trigger: TCCTGCGTACCTATGCCAGCACAGAGCAGGAGCAGG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTTCTCCTCTGCATCCTaGTCCTGCTCTGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEFSSAS*SCSVLA
Trigger: TGCCAGCACAGAGCAGGAGCAGGATGCAGAGGAGAA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACACTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGAGCTGTCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSESCLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCTGTCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPSCLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCT...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCGATCCCTTGTGAAATaGCCAGGGCTCCATAGACGC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPRSLVK*PGLHRR
Trigger: GCGTCTATGGAGCCCTGGGCATTTCACAAGGGATCG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEWMKRS*SSKARM
Trigger: CATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAACCTGTTGGCCACGATaGTGGGGTAATAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGTCWPR*WGNRPS
Trigger: AGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAATCGTGACATTGATGTaGCTGAGAACGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPIVTLM*LRTKSR
Trigger: CCTGGACTTCGTTCTCAGGCACATCAATGTCACGAT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCTTGAAGCGGAGGTCGTaGAGGCCGATCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFLKRRS*RPILAM
Trigger: CATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACACACAAGCTGGCGCTaGCCGACACTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGHTSWR*PTLRFS
Trigger: GGAGAACCTCAGTGTCGGGCAGCGCCAGCTTGTGTG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCGGCGTCTTTGGCCATaGTGTAGAAAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGRRLWP*CRKDLS
Trigger: AGAGAGGTCTTTTCTACAGCATGGCCAAAGACGCCG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GGAAGCCACGTAGAACCTCTGGACGAAGAAGTAGATGAGGCCAAGGGGCGGGATCGGCGTCTTTGGCCATaGTGTAGAAAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: GSHVEPLDEEVDEAKGRDRRLWP*CRKDLS
Trigger: AGAGAGGTCTTTTCTACAGCATGGCCAAAGACGCCG...ATCCCGCCCCTTGGCCTCATCTACTTCTTCGTCCAGAGGTTCTACGTGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGSSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCGAAACAGGTCCACCTaGGCATCCTCTTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGRNRST*ASSFKA
Trigger: AGCCTTAAAAGAGGATGCCCAGGTGGACCTGTTTCG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASNIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSVALPV*GLRVIH
Trigger: GTGAATGACACGAAGGCCCCAGACTGGCAGGGCTAC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGVALPV*GLRVIH
Trigger: GTGAATGACACGAAGGCCCCAGACTGGCAGGGCTAC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFVALPV*GLRVIH
Trigger: GTGAATGACACGAAGGCCCCAGACTGGCAGGGCTAC...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCAGATGTGGAAGTACTaGTGCAGCACGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPQMWKY*CSTRVC
Trigger: GCAGACCCTCGTGCTGCACCAGTACTTCCACATCTG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTGACGAAGCAGATGTaGAAGTACTGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPLTKQM*KYWCST
Trigger: CGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATCACGGACCTGTAATATaGTTCCTCCAGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHHGPVI*FLQLTS
Trigger: GGATGTCAGCTGGAGGAACCATATTACAGGTCCGTG...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGATGCCGACCTTTTCTCCCCCATTGATCGTGACATTGATGTGCCTGAGAACGCTGTCCGATCCCCACTaGGCAGGATTTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TMPTFSPPLIVTLMCLRTLSDPH*AGFPGL
Trigger: CAGACCTGGAAATCCTGCCCAGTGGGGATCGGACAG...CGTTCTCAGGCACATCAATGTCACGATCAATGGGGGAGAAAAGGTCGGCATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTCTTCAGCATCCCCTTaGGGCCAATCACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSSASP*GQSHFQ
Trigger: TTGAAAATGTGATTGGCCCCAAGGGGATGCTGAAGA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTTCAGCATCCCCTTaGGGCCAATCACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASSSASP*GQSHFQ
Trigger: TTGAAAATGTGATTGGCCCCAAGGGGATGCTGAAGA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTCTTCAGCATCCCCTTaGGGCCAATCACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELSSASP*GQSHFQ
Trigger: TTGAAAATGTGATTGGCCCCAAGGGGATGCTGAAGA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCTCCTGCTCTGTGCTaGCATAGGTACGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEAPALC*HRYAGT
Trigger: AGTTCCTGCGTACCTATGCCAGCACAGAGCAGGAGC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGCTCCTGCTCTGTGCTaGCATAGGTACGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLAPALC*HRYAGT
Trigger: AGTTCCTGCGTACCTATGCCAGCACAGAGCAGGAGC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWELCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGLCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCATGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPCWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACGGCCAGCCACCTGTTaGCCACGATGCTGGGGTAAT +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWERPATC*PRCWGN
Trigger: ATTACCCCAGCATCGTGGCCAACAGGTGGCTGGCCG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGGCGGAGCTGTCTCCTaGATTTGCCAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLGGAVS*ICQGAS
Trigger: GGAGGCGCCCTGGCAAATCCAGGAGACAGCTCCGCC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPSAHS*SSLSGR
Trigger: CCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGGTCCACGGCTGCCGTaGCCTCATCCAACACAAGGA +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEGPRLP*PHPTQG
Trigger: TCCTTGTGTTGGATGAGGCCACGGCAGCCGTGGACC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAATGGTGTTGAGCCGGTaGGCGATGGTGAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEMVLSR*AMVRTV
Trigger: CACCGTCCTCACCATCGCCCACCGGCTCAACACCAT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACCAAGCCGGCGTCTTTaGCCATGCTGTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPPSRRL*PCCRKD
Trigger: GTCTTTTCTACAGCATGGCCAAAGACGCCGGCTTGG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACCAAGCCGGCGTCTTTaGCCATGCTGTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGPSRRL*PCCRKD
Trigger: GTCTTTTCTACAGCATGGCCAAAGACGCCGGCTTGG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLCRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGAGGGAAGCCCCAGGTaGAACGTCGGCCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALEGSPR*NVGPET
Trigger: TGTCTCAGGGCCGACGTTCCACCTGGGGCTTCCCTC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTTCTCACTATTTCCTaGGAATGTTACTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLLTIS*ECYFSA
Trigger: GGCTGAGAAGTAACATTCCCAGGAAATAGTGAGAAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 72 bp GTTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: VRGDGSQKHLKD*QSTDFGWRDPR
Trigger: CCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 72 bp GCACCAATGACGTTGAACAGGGAGCCCATGAACATCTaGATGACCTCCGGGATCATGGAGTCCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: APMTLNREPMNI*MTSGIMESTVS
Trigger: GGACACAGTGGACTCCATGATCCCGGAGGTCATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CAA 72 bp GTGGCCAGCAGGATAACGATGCAGGCACCAATGACGTaGAACAGGGAGCCCATGAACATCTTGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: VASRITMQAPMT*NREPMNILMTS
Trigger: GGAGGTCATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTGCATCGTTATCCTGCTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
3UTR CAA 72 bp ACGATGCCGACCTTTTCTCCCCCATTGATCGTGACATaGATGTGCCTGAGAACGAAGTCCAGGTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TMPTFSPPLIVT*MCLRTKSRSSR
Trigger: CCGAGAGGACCTGGACTTCGTTCTCAGGCACATCAATGTCACGATCAATGGGGGAGAAAAGGTCGGCATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTGCTGGTATTCCACGTaGCATTCCAGTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGCWYST*HSSPRA
Trigger: CGCTCTGGGACTGGAATGTCACGTGGAATACCAGCA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTCTGAAAGCACTTGGTaGAGTCGGGGTTGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLSESTW*SRGCWY
Trigger: ATACCAGCAACCCCGACTTCACCAAGTGCTTTCAGA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACCAAGAGAGTTGGGCTaGCCAGAAACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGPRELG*PETLGP
Trigger: TGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCCAAGAGAGTTGGGCTaGCCAGAAACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWPRELG*PETLGP
Trigger: TGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTTCCTCCTCTCCAGCTaGATTAAAAAGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRFLLSS*IKKVAS
Trigger: GCTTGCTACCTTTTTAATTCAGCTGGAGAGGAGGAA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAAGTGAGCATGATCCCTaGAGACTGAACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGSEHDP*RLNSLP
Trigger: AGGAAGGGAGTTCAGTCTTCAGGGATCATGCTCACT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCAGGACAAGACGAGCTaGATGAGTAAGAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAQDKTS*MSKREK
Trigger: CTTTTCCCTCTTACTCATTCAGCTCGTCTTGTCCTG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGCCTTCTGTGGGGACTTaGCGATCAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLPSVGT*RSKPPP
Trigger: AGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGG...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTTCTGGCTGAATTGGTaGTCACCAGGGCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPFWLNW*SPGPSD
Trigger: ATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTTCTGGCTGAATTGGTaGTCACCAGGGCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVFWLNW*SPGPSD
Trigger: ATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGGAGGATTTTCTGGCTaGATTGGTGATCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPGGFSG*IGDHQG
Trigger: GCCCTGGTGATCACCAATTCAGCCAGAAAATCCTCC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTTTCGTTCATCAGCTTaGTCCGATTGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RRGSAEAASGPKRELVELFRSSA*SDCLCS
Trigger: AGAGCAAAGACAATCGGATCAAGCTGATGAACGAAA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGAAACCGGAGGATGTTaGACAAGGCCAAAGACACGA +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLETGGC*TRPKTR
Trigger: TCGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWERSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSRSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGATCCTCAGGCGTTTaGGGGAGACACTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGRSSGV*GRHSPA
Trigger: TGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTATGGTTCCTCCAGCTaGCATCCAAAAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWYGSSS*HPKRMF
Trigger: AAACATCCTTTTTGGATGTCAGCTGGAGGAACCATA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTCTCTGAATACTCCTTaGGCCTCTCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSSLNTP*ASPRPR
Trigger: TCGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGATGGTGGACTGGATaGGGTCGTCCGTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWGWWTG*GRPFPG
Trigger: ACCTGGAAACGGACGACCTCATCCAGTCCACCATCC...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAATCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCT +
Preference number: 4 (lower is better)
Translates to: SSKARMTLTPSKVSLKWESEAVG*IWSLGS
Trigger: AGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGA...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCACTAAACCCCATCTaGCTAGTGATCTCTACAACT +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPLNPI*LVISTT
Trigger: AGTTGTAGAGATCACTAGTCAGATGGGGTTTAGTGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGAGAGTAGAAGAGGTCTaGCCAGCAGACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSERVEEV*PADDPQ
Trigger: CTGTGGATCGTCTGCTGGGCAGACCTCTTCTACTCT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGAGTAGAAGAGGTCTaGCCAGCAGACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPRVEEV*PADDPQ
Trigger: CTGTGGATCGTCTGCTGGGCAGACCTCTTCTACTCT...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAGCAACTTTAAGATCTaGGGCCCGGAAAACATCATC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPSNFKI*GPENII
Trigger: GATGATGTTTTCCGGGCCGCAGATCTTAAAGTTGCT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCCCTTGATAGCCACGTaGCCCTCCACTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGPLIAT*PSTLSI
Trigger: GATGGACAAAGTGGAGGGGCACGTGGCTATCAAGGG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCCTGCTCCTGCTCTGTaGTGGCATAGGTACGCAGGA +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSPAPAL*WHRYAG
Trigger: TCCTGCGTACCTATGCCAGCACAGAGCAGGAGCAGG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGAGCTGTCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRSCLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCTGCTGAGCTGTCTCTaGAGTTGCTTCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSLLSCL*SCFPAL
Trigger: CAGTGCAGGGAAGCAACTGCAGAGACAGCTCAGCAG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCTGCTGAGCTGTCTCTaGAGTTGCTTCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRLLSCL*SCFPAL
Trigger: CAGTGCAGGGAAGCAACTGCAGAGACAGCTCAGCAG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSTESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCGATCCCTTGTGAAATaGCCAGGGCTCCATAGACGC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSRSLVK*PGLHRR
Trigger: GCGTCTATGGAGCCCTGGGCATTTCACAAGGGATCG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGTGGATGAAGCGCTCCTaGTCCTCGAAGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLWMKRS*SSKARM
Trigger: CATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCA...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTACCTGTTGGCCACGATaGTGGGGTAATAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVTCWPR*WGNRPS
Trigger: AGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACACACAAGCTGGCGCTaGCCGACACTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALHTSWR*PTLRFS
Trigger: GGAGAACCTCAGTGTCGGGCAGCGCCAGCTTGTGTG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRRLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCGTCCATCACTGTGCTaGCGTTCTCCTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRRPSLC*RSPLHP
Trigger: AGGATGCAGAGGAGAACGGCAGCACAGTGATGGACG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399408.7
ENST00000622828.3
CDS-3UTR GCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGATCTCTACAACTTaGCCTTTCTGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGVISTT*PFWQQL
Trigger: GAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCAC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATGTGATCTCTACAACTTaGCCTTTCTGGCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHVISTT*PFWQQL
Trigger: GAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCAC...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGATGCCCAAGAGAGTTaGGCTGACCAGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPDAQES*ADQKHW
Trigger: CCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACGAAACAGGTCCACCTaGGCATCCTCTTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPRNRST*ASSFKA
Trigger: AGCCTTAAAAGAGGATGCCCAGGTGGACCTGTTTCG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCAGGGATTAGGGTCGTaGATGGTTTCCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLQGLGS*MVSENR
Trigger: CCTGTTCTCGGAAACCATCCACGACCCTAATCCCTG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSNIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGVALPV*GLRVIH
Trigger: GTGAATGACACGAAGGCCCCAGACTGGCAGGGCTAC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCAGATGTGGAAGTACTaGTGCAGCACGAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRQMWKY*CSTRVC
Trigger: GCAGACCCTCGTGCTGCACCAGTACTTCCACATCTG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVDTKAV*ASRMLF
Trigger: GAACAACATCCTGGATGCCCAGACAGCCTTCGTGTC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTGTCCGATCCCCACTaGGCAGGATTTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLSDPH*AGFPGL
Trigger: CAGACCTGGAAATCCTGCCCAGTGGGGATCGGACAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGGTAAATGTCAGCGTTaGAGTACACGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGGKCQR*STRPGP
Trigger: TGGCCCGGGCCGTGTACTCCAACGCTGACATTTACC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTCTTCAGCATCCCCTTaGGGCCAATCACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSSSASP*GQSHFQ
Trigger: TTGAAAATGTGATTGGCCCCAAGGGGATGCTGAAGA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTTCAGGTCACTCTGGTaGATGAAGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRFRSLW*MKRSCS
Trigger: GGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTTCAGGTCACTCTGGTaGATGAAGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGFRSLW*MKRSCS
Trigger: GGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRTFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCATCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPSSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGPSAHS*SSLSGR
Trigger: CCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRGAPYS*ISPLSK
Trigger: CTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCCAAGCCGGCGTCTTTaGCCATGCTGTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEPSRRL*PCCRKD
Trigger: GTCTTTTCTACAGCATGGCCAAAGACGCCGGCTTGG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTTCCGGATTCCACTTTaGGCTCTAACGAGACACCTT +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAFRIPL*ALTRHL
Trigger: AAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 72 bp ATGGTGATCTTGAAGCGGAGGTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCGATGATGATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MVILKRRSCRPI*AMLMPSMMISP
Trigger: AGGAGAGATCATCATCGATGGCATCAACATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAAGATCACCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTCTGAAAGCACTTGGTaGAGTCGGGGTTGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSESESTW*SRGCWY
Trigger: ATACCAGCAACCCCGACTTCACCAAGTGCTTTCAGA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGACGAGGACCGTGTTCTaGAAGCACTTGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRTRTVF*KHLVKS
Trigger: CGACTTCACCAAGTGCTTTCAGAACACGGTCCTCGT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACCAAGAGAGTTGGGCTaGCCAGAAACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALPRELG*PETLGP
Trigger: TGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACTTCCTCCTCTCCAGCTaGATTAAAAAGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHFLLSS*IKKVAS
Trigger: GCTTGCTACCTTTTTAATTCAGCTGGAGAGGAGGAA...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGAGTGAGCATGATCCCTaGAGACTGAACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLSEHDP*RLNSLP
Trigger: AGGAAGGGAGTTCAGTCTTCAGGGATCATGCTCACT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTAGTAGACGTAGAAAGTaGTGTCACGAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPASRRRK*CHETGP
Trigger: TGGACCTGTTTCGTGACATCACTTTCTACGTCTACT...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCCTTCTGTGGGGACTTaGCGATCAAAGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSPSVGT*RSKPPP
Trigger: AGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALTWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTTTCGTTCATCAGCTTaGTCCGATTGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAFRSSA*SDCLCS
Trigger: AGAGCAAAGACAATCGGATCAAGCTGATGAACGAAA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACGGAGAGAATCATTCTaGATCCAGGCCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGRRESF*IQACCG
Trigger: GCCACAGCAGGCCTGGATTCAGAATGATTCTCTCCG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGATGGGCATCCACTGCTaGGAGGGGATCATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSMGIHC*EGIIEE
Trigger: CTCTTCGATGATCCCCTCTCAGCAGTGGATGCCCAT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAGGAGGAGGAGCTGCTaGGCTGTCTCTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRRRSC*AVSAVA
Trigger: AGCAACTGCAGAGACAGCTCAGCAGCTCCTCCTCCT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWCCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCCCTTGATAGCCACGTaGCCCTCCACTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSPLIAT*PSTLSI
Trigger: GATGGACAAAGTGGAGGGGCACGTGGCTATCAAGGG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGACCCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALDPVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGGGTC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCATGTCCGTCACCAGCATaGCATTCTCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPCPSPA*HSPFAL
Trigger: CAAAGCAAATGGAGAATGGCATGCTGGTGACGGACA...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGAGCTGTCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSSCLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGCTGTCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGSCLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACTGCTGAGCTGTCTCTaGAGTTGCTTCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWELLSCL*SCFPAL
Trigger: CAGTGCAGGGAAGCAACTGCAGAGACAGCTCAGCAG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGTESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCGATCCCTTGTGAAATaGCCAGGGCTCCATAGACGC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWRSLVK*PGLHRR
Trigger: GCGTCTATGGAGCCCTGGGCATTTCACAAGGGATCG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGTGGGTGACCGCAGGATaGTGTGCAGCAGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKWVTAG*CAAGPR
Trigger: ACGTGGACCTGCTGCACAGCATCCTGCGGTCACCCA...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAATCGTGACATTGATGTaGCTGAGAACGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPIVTLM*LRTKSR
Trigger: CCTGGACTTCGTTCTCAGGCACATCAATGTCACGAT...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCGGCGTCTTTGGCCATaGTGTAGAAAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPRRLWP*CRKDLS
Trigger: AGAGAGGTCTTTTCTACAGCATGGCCAAAGACGCCG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSELAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGACAGGCTTTAAAAGATaGTGCTTCCCTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWTGFKR*CFPVFF
Trigger: GAAGAAAACAGGGAAGCAGCATCTTTTAAAGCCTGT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWESLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGTCTTGATAGCCACGTaGCCCTCCACTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRVLIAT*PSTLSI
Trigger: GATGGACAAAGTGGAGGGGCACGTGGCTATCAAGAC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677164.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTTTTGGATCTCAGGATaGCTAGGGCACACACTAGGG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEFWISG*LGHTLG
Trigger: CCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTTTTGGATCTCAGGATaGCTAGGGCACACACTAGGG +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLFWISG*LGHTLG
Trigger: CCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCGAAACAGGTCCACCTaGGCATCCTCTTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPRNRST*ASSFKA
Trigger: AGCCTTAAAAGAGGATGCCCAGGTGGACCTGTTTCG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCAGGGATTAGGGTCGTaGATGGTTTCCGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSQGLGS*MVSENR
Trigger: CCTGTTCTCGGAAACCATCCACGACCCTAATCCCTG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGGAAGCGCTGGACTCTaGGCAGGGATTAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLGSAGL*AGIRVV
Trigger: CACGACCCTAATCCCTGCCCAGAGTCCAGCGCTTCC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCATTCGCATCCACCTTaGAACTCTCTTTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGHSHPP*NSLSAG
Trigger: CCCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGATGCCGACCTTTTCTCCCCCATTGATCGTGACATTGATGTGCCTGAGAACGCTGACGAAGCAGATGTaGAAGTACTGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: TMPTFSPPLIVTLMCLRTLTKQM*KYWCST
Trigger: CGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAG...CGTTCTCAGGCACATCAATGTCACGATCAATGGGGGAGAAAAGGTCGGCATCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCACGGACCTGTAATATaGTTCCTCCAGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVHGPVI*FLQLTS
Trigger: GGATGTCAGCTGGAGGAACCATATTACAGGTCCGTG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGGTAAATGTCAGCGTTaGAGTACACGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALGKCQR*STRPGP
Trigger: TGGCCCGGGCCGTGTACTCCAACGCTGACATTTACC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLLCFLP*TADARD
Trigger: GTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALSAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTTCAGGTCACTCTGGTaGATGAAGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSFRSLW*MKRSCS
Trigger: GGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWTFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGACCTTCAGGTCACTCTaGTGGATGAAGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSTFRSL*WMKRSC
Trigger: GCAGGAGCGCTTCATCCACCAGAGTGACCTGAAGGT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRCWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSCWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAAACAAAACAGGGTCCTaGGGGATGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGNKTGS*GMMVIL
Trigger: CAAGATCACCATCATCCCCCAGGACCCTGTTTTGTT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVSSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSESSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLPSAHS*SSLSGR
Trigger: CCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGCTAGGCACACAAGCTaGCGCTGCCCGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILARHTS*RCPTLR
Trigger: CCTCAGTGTCGGGCAGCGCCAGCTTGTGTGCCTAGC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCCAAGCCGGCGTCTTTaGCCATGCTGTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSPSRRL*PCCRKD
Trigger: GTCTTTTCTACAGCATGGCCAAAGACGCCGGCTTGG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCAGATATGCCAGCTCTaGGGCTCACACCAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKQICQL*GSHQAG
Trigger: GCCGGCTTGGTGTGAGCCCCAGAGCTGGCATATCTG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCTCCTCCCTGGGCGCTaGCATATAGGCCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLLPGR*HIGPAV
Trigger: AACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTGTGCGTGTTTTGGGTaGTTCGCATCTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVCACFG*FASLSL
Trigger: GAGAGACAGAGATGCGAACCACCCAAAACACGCACA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATGCAGAGGCTGCCTCTaGCCCAAAACGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGCRGCL*PKTRTG
Trigger: ACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGAGGGAAGCCCCAGGTaGAACGTCGGCCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILEGSPR*NVGPET
Trigger: TGTCTCAGGGCCGACGTTCCACCTGGGGCTTCCCTC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCTCACTATTTCCTaGGAATGTTACTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSLLTIS*ECYFSA
Trigger: GGCTGAGAAGTAACATTCCCAGGAAATAGTGAGAAG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCTTCTCACTATTTCCTaGGAATGTTACTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRLLTIS*ECYFSA
Trigger: GGCTGAGAAGTAACATTCCCAGGAAATAGTGAGAAG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACTTCTCACTATTTCCTaGGAATGTTACTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPLLTIS*ECYFSA
Trigger: GGCTGAGAAGTAACATTCCCAGGAAATAGTGAGAAG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTTCCGGATTCCACTTTaGGCTCTAACGAGACACCTT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLFRIPL*ALTRHL
Trigger: AAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTACAACTTGCCCTTTCTaGCAACAGCTCCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVTTCPF*QQLPLE
Trigger: CTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTCTGAAAGCACTTGGTaGAGTCGGGGTTGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRSESTW*SRGCWY
Trigger: ATACCAGCAACCCCGACTTCACCAAGTGCTTTCAGA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTCTGAAAGCACTTGGTaGAGTCGGGGTTGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSESTW*SRGCWY
Trigger: ATACCAGCAACCCCGACTTCACCAAGTGCTTTCAGA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAACGAGGACCGTGTTCTaGAAGCACTTGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWETRTVF*KHLVKS
Trigger: CGACTTCACCAAGTGCTTTCAGAACACGGTCCTCGT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCAGTTTTGGTTTTGTTaGGAGGTGTCATCTGAATGT +
Preference number: 4 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRQFWFC*EVSSEC
Trigger: ACATTCAGATGACACCTCTCAACAAAACCAAAACTG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCAAGAGAGTTGGGCTaGCCAGAAACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPRELG*PETLGP
Trigger: TGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATTCCTCCTCTCCAGCTaGATTAAAAAGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGFLLSS*IKKVAS
Trigger: GCTTGCTACCTTTTTAATTCAGCTGGAGAGGAGGAA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGTGAGCATGATCCCTaGAGACTGAACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSEHDP*RLNSLP
Trigger: AGGAAGGGAGTTCAGTCTTCAGGGATCATGCTCACT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCAGGACAAGACGAGCTaGATGAGTAAGAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPQDKTS*MSKREK
Trigger: CTTTTCCCTCTTACTCATTCAGCTCGTCTTGTCCTG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCAGGACAAGACGAGCTaGATGAGTAAGAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEQDKTS*MSKREK
Trigger: CTTTTCCCTCTTACTCATTCAGCTCGTCTTGTCCTG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATTCTGGCTGAATTGGTaGTCACCAGGGCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGFWLNW*SPGPSD
Trigger: ATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTTTCGTTCATCAGCTTaGTCCGATTGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGPKRELVELALRCWFPAFRSSA*SDCLCS
Trigger: AGAGCAAAGACAATCGGATCAAGCTGATGAACGAAA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILSAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKEGAHG*QVGRLL
Trigger: AAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACA +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLACRPR*RCPRLT
Trigger: TGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAGCTCATGCTGTGCGTaGCCAAGATCCGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALSSCCA*PRSASC
Trigger: ACAAGACGCGGATCTTGGTCACGCACAGCATGAGCT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR TCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGAGGAGGAGGAGCTGCTaGGCTGTCTCTGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKRRRSC*AVSAVA
Trigger: AGCAACTGCAGAGACAGCTCAGCAGCTCCTCCTCCT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACATCAGTCCAGAGGCTaGGCCAATAGTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEHQSRG*ANSWKP
Trigger: TGGCTTCCAACTATTGGCTCAGCCTCTGGACTGATG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCACGGCGATCCCTTGTaGAATGCCCAGGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKHGDPL*NAQGSI
Trigger: TATGGAGCCCTGGGCATTTCACAAGGGATCGCCGTG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAGACCGGGGAGCGGCTaGCCGACTCGAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTRPGSG*PTRGAS
Trigger: TGAAGCGCCTCGAGTCGGTCAGCCGCTCCCCGGTCT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATCTCTGAATACTCCTTaGGCCTCTCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALSLNTP*ASPRPR
Trigger: TCGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATAACGATGCAGGCACCAATGACGTTGAACAGGGAGCCCATGAACATCTTGATCTTCGGCAGACTCGTTaGTCCGAAATAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DNDAGTNDVEQGAHEHLDLRQTR*SEISPG
Trigger: CCCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAG...ATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTGCATCGTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACATCCGAGTACTGGCTaGATGGGTCCAGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEHPSTG*MGPGSF
Trigger: GAATGAACCTGGACCCATTCAGCCAGTACTCGGATG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCATCCGAGTACTGGCTaGATGGGTCCAGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWHPSTG*MGPGSF
Trigger: GAATGAACCTGGACCCATTCAGCCAGTACTCGGATG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSLVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGAGAGTAGAAGAGGTCTaGCCAGCAGACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWRVEEV*PADDPQ
Trigger: CTGTGGATCGTCTGCTGGGCAGACCTCTTCTACTCT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACCCTTGATAGCCACGTaGCCCTCCACTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALPLIAT*PSTLSI
Trigger: GATGGACAAAGTGGAGGGGCACGTGGCTATCAAGGG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCCTGCTCCTGCTCTGTaGTGGCATAGGTACGCAGGA +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKPAPAL*WHRYAG
Trigger: TCCTGCGTACCTATGCCAGCACAGAGCAGGAGCAGG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGACCCCGTTCTCCTCTaGATCCTGCTCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKDPVLL*ILLLLC
Trigger: ACAGAGCAGGAGCAGGATGCAGAGGAGAACGGGGTC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTGTCCGTCACCAGCATaGCATTCTCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVCPSPA*HSPFAL
Trigger: CAAAGCAAATGGAGAATGGCATGCTGGTGACGGACA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGACCGCAGGATGCTGTaGAGCAGGTCCACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILDRRML*SRSTCR
Trigger: TCTGCACGTGGACCTGCTGCACAGCATCCTGCGGTC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCACCTGGGGCCAGCTaGTGGGCGGAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPPGAS*WAELSP
Trigger: AGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGGTGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTATCGTGACATTGATGTaGCTGAGAACGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVIVTLM*LRTKSR
Trigger: CCTGGACTTCGTTCTCAGGCACATCAATGTCACGAT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGATCGTGACATTGATGTaGCTGAGAACGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEIVTLM*LRTKSR
Trigger: CCTGGACTTCGTTCTCAGGCACATCAATGTCACGAT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWESSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACACCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR GCA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAACAGGCTTTAAAAGATaGTGCTTCCCTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPTGFKR*CFPVFF
Trigger: GAAGAAAACAGGGAAGCAGCATCTTTTAAAGCCTGT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTGGCCCTCAAATCTCTaGAGTTGCTTCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSWPSNL*SCFPAL
Trigger: CAGTGCAGGGAAGCAACTGCAGAGATTTGAGGGCCA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGCTGACCAGAAACACTaGGGCCAGGAATATGCCCCG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLADQKH*GQEYAP
Trigger: CGGGGCATATTCCTGGCCCCAGTGTTTCTGGTCAGC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGATGCCCAAGAGAGTTaGGCTGACCAGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEDAQES*ADQKHW
Trigger: CCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATGCCCAAGAGAGTTaGGCTGACCAGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWDAQES*ADQKHW
Trigger: CCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATC...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTTTTGGATCTCAGGATaGCTAGGGCACACACTAGGG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSFWISG*LGHTLG
Trigger: CCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLVALPV*GLRVIH
Trigger: GTGAATGACACGAAGGCCCCAGACTGGCAGGGCTAC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTGACGAAGCAGATGTaGAAGTACTGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLTKQM*KYWCST
Trigger: CGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEDTKAV*ASRMLF
Trigger: GAACAACATCCTGGATGCCCAGACAGCCTTCGTGTC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGDTKAV*ASRMLF
Trigger: GAACAACATCCTGGATGCCCAGACAGCCTTCGTGTC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCACGGACCTGTAATATaGTTCCTCCAGCTGACATCC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSHGPVI*FLQLTS
Trigger: GGATGTCAGCTGGAGGAACCATATTACAGGTCCGTG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCATCTTCAGCATCCCCTTaGGGCCAATCACATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPSSASP*GQSHFQ
Trigger: TTGAAAATGTGATTGGCCCCAAGGGGATGCTGAAGA...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGCTCCTGCTCTGTGCTaGCATAGGTACGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALAPALC*HRYAGT
Trigger: AGTTCCTGCGTACCTATGCCAGCACAGAGCAGGAGC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGTCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKSAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTCTGCGGTGCTGTTGTaGTGCCTGCTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSAVLL*CLLMSP
Trigger: TGGGGACATCAGCAGGCACCACAACAGCACCGCAGA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCGATGGACACGGCCATaGAGTAGCCAAACACGGCGA +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKRWTRP*SSQTRR
Trigger: TCGCCGTGTTTGGCTACTCCATGGCCGTGTCCATCG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATTCAGGTCACTCTGGTaGATGAAGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALFRSLW*MKRSCS
Trigger: GGAGCAGGAGCGCTTCATCCACCAGAGTGACCTGAA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWECWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: PEASQRLAVHRLRLERSEPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCTGGGGCCAGCTGCTaGGCGGAGCTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPGASC*AELSPG
Trigger: TCCAGGAGACAGCTCCGCCCAGCAGCTGGCCCCAGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWERVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTCTTCATCCGAGTACTaGCTGAATGGGTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSSSSEY*LNGSRF
Trigger: GAACCTGGACCCATTCAGCCAGTACTCGGATGAAGA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCCAAGCCGGCGTCTTTaGCCATGCTGTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSPSRRL*PCCRKD
Trigger: GTCTTTTCTACAGCATGGCCAAAGACGCCGGCTTGG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGTACTGACTCCTCCCTaGGCGCTGGCATATAGGCCC +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILVLTPP*ALAYRP
Trigger: GGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTAC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWERVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGCCAAAACTCCTCCGTaGGAAGCACCAGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALAKTPP*EAPGNH
Trigger: GTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGATTGATATTCAAAGATaGGTTCTTTTCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PWALAYRPCSSDQICQLWIDIQR*VLFVSW
Trigger: CCAGGACACGAAAAGAACCCATCTTTGAATATCAAT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCATTGATATTCAAAGATaGGTTCTTTTCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASIDIQR*VLFVSW
Trigger: CCAGGACACGAAAAGAACCCATCTTTGAATATCAAT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTTCCGGATTCCACTTTaGGCTCTAACGAGACACCTT +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLFRIPL*ALTRHL
Trigger: AAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAACAGGAAGGAAGCGCTaGACTCTGGGCAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALTGRKR*TLGRDS
Trigger: AGAATCCCTGCCCAGAGTCCAGCGCTTCCTTCCTGT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677164.1
3UTR CAA 72 bp TCTGAATACTCCTTGAGCCTCTCCACGGCCACGATGTaGGTTTCCATTTCAGATGACATCCGAACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SEYSLSLSTATM*VSISDDIRTSQ
Trigger: CTGGCTGGTTCGGATGTCATCTGAAATGGAAACCAACATCGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGAGTGAGCATGATCCCTaGAGACTGAACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWSEHDP*RLNSLP
Trigger: AGGAAGGGAGTTCAGTCTTCAGGGATCATGCTCACT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAAGTGAGCATGATCCCTaGAGACTGAACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWESEHDP*RLNSLP
Trigger: AGGAAGGGAGTTCAGTCTTCAGGGATCATGCTCACT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTAGACGTAGAAAGTaGTGTCACGAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPSRRRK*CHETGP
Trigger: TGGACCTGTTTCGTGACATCACTTTCTACGTCTACT...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCAGGACAAGACGAGCTaGATGAGTAAGAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGQDKTS*MSKREK
Trigger: CTTTTCCCTCTTACTCATTCAGCTCGTCTTGTCCTG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATTCTGGCTGAATTGGTaGTCACCAGGGCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALFWLNW*SPGPSD
Trigger: ATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTACGTGGCCAAGTCCATaGACCTCTGAGCGTCCACAG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILTWPSP*TSERPQ
Trigger: CTGTGGACGCTCAGAGGTTCATGGACTTGGCCACGT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGAAACCGGAGGATGTTaGACAAGGCCAAAGACACGA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGETGGC*TRPKTR
Trigger: TCGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCGGAGAGAATCATTCTaGATCCAGGCCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLRRESF*IQACCG
Trigger: GCCACAGCAGGCCTGGATTCAGAATGATTCTCTCCG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTATGGTTCCTCCAGCTaGCATCCAAAAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLYGSSS*HPKRMF
Trigger: AAACATCCTTTTTGGATGTCAGCTGGAGGAACCATA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCATGGGCATCCACTGCTaGGAGGGGATCATCGAAGAG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLMGIHC*EGIIEE
Trigger: CTCTTCGATGATCCCCTCTCAGCAGTGGATGCCCAT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAGCTCATGCTGTGCGTaGCCAAGATCCGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSSCCA*PRSASC
Trigger: ACAAGACGCGGATCTTGGTCACGCACAGCATGAGCT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR TCA 90 bp GATAACGATGCAGGCACCAATGACGTTGAACAGGGAGCCCATGAACATCTTGATCATCAGTCCAGAGGCTaGGCCAATAGTTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DNDAGTNDVEQGAHEHLDHQSRG*ANSWKP
Trigger: TGGCTTCCAACTATTGGCTCAGCCTCTGGACTGATG...ATCAAGATGTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTGCATCGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCACGGCGATCCCTTGTaGAATGCCCAGGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILHGDPL*NAQGSI
Trigger: TATGGAGCCCTGGGCATTTCACAAGGGATCGCCGTG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGGTTTCCATTTCAGATaGCATCCGAACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSGFHFR*HPNQPV
Trigger: AACTGGCTGGTTCGGATGTCATCTGAAATGGAAACC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGTGATCTCTACAACTTGCCCTTTCTGGCAACAGCTCCCACTAGAGGCGACTTGCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SDLYNLPFLATAPTRGDLRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...CAAGTCGCCTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCT +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWSEAVG*IWSLGS
Trigger: AGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACTGGTTCCCAGCTTTTaGGTGCCTGGAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALLVPSF*VPGRPD
Trigger: ATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCAG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCCTTGATAGCCACGTaGCCCTCCACTTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPLIAT*PSTLSI
Trigger: GATGGACAAAGTGGAGGGGCACGTGGCTATCAAGGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCACGGAAAGCTTGACCTaGCCTGTCTGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLTESLT*PVCALS
Trigger: TGACAAGGCGCAGACAGGGCAGGTCAAGCTTTCCGT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAACCTGTTGGCCACGATaGTGGGGTAATAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALTCWPR*WGNRPS
Trigger: AGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCATCGTGACATTGATGTaGCTGAGAACGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSIVTLM*LRTKSR
Trigger: CCTGGACTTCGTTCTCAGGCACATCAATGTCACGAT...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTTGAAGCGGAGGTCGTaGAGGCCGATCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILLKRRS*RPILAM
Trigger: CATCGCCAAGATCGGCCTGCACGACCTCCGCTTCAA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAAAAGACCTCTCTGCTaGAGGAGGTCCGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILKRPLC*RRSDGA
Trigger: CGCCCCATCGGACCTCCTGCAGCAGAGAGGTCTTTT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCTCCAGAAGTCTGGCTaGCAAAACTCCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLQKSG*QNSSVG
Trigger: TCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTCAAATCTCTGCAGTTaGTTCCCTGCACTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWSNLCS*FPALSV
Trigger: GACGGACAGTGCAGGGAAGCAACTGCAGAGATTTGA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLNIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVNIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACTGACGAAGCAGATGTaGAAGTACTGGTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALLTKQM*KYWCST
Trigger: CGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACAATCTCCCCGACCGTaGAGGATTTTCTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGQSPRP*RIFWLN
Trigger: ATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGCTAGGCACACAAGCTaGCGCTGCCCGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLARHTS*RCPTLR
Trigger: CCTCAGTGTCGGGCAGCGCCAGCTTGTGTGCCTAGC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILVRMVD*MRSSVS
Trigger: GGAAACGGACGACCTCATCCAGTCCACCATCCGGAC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKGAPYS*ISPLSK
Trigger: CTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCTGCAGGAGGTCCGATaGGGCGCCGTACTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLQEVR*GAVLLD
Trigger: ATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTTCCGGATTCCACTTTaGGCTCTAACGAGACACCTT +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRFRIPL*ALTRHL
Trigger: AAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGACAACTTGCCCTTTCTaGCAACAGCTCCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWTTCPF*QQLPLE
Trigger: CTCTAGTGGGAGCTGTTGCCAGAAAGGGCAAGTTGT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCACGAGGACCGTGTTCTaGAAGCACTTGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLTRTVF*KHLVKS
Trigger: CGACTTCACCAAGTGCTTTCAGAACACGGTCCTCGT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCAGTTTTGGTTTTGTTaGGAGGTGTCATCTGAATGT +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLQFWFC*EVSSEC
Trigger: ACATTCAGATGACACCTCTCAACAAAACCAAAACTG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACAGGACAAGACGAGCTaGATGAGTAAGAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGQDKTS*MSKREK
Trigger: CTTTTCCCTCTTACTCATTCAGCTCGTCTTGTCCTG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATTCATGTGGGCCACCTaGTACGTCTTGGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALFMWAT*YVLVFI
Trigger: GATGAAGACCAAGACGTATCAGGTGGCCCACATGAA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTTTCGTTCATCAGCTTaGTCCGATTGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVFRSSA*SDCLCS
Trigger: AGAGCAAAGACAATCGGATCAAGCTGATGAACGAAA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCTCAGCTCCTCCTGCCTaGTGGCCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLSAPPA*WPAPCP
Trigger: AGGACAAGGTGCTGGCCATCAGGCAGGAGGAGCTGA...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGAAACCGGAGGATGTTaGACAAGGCCAAAGACACGA +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALETGGC*TRPKTR
Trigger: TCGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTATGGTTCCTCCAGCTaGCATCCAAAAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVYGSSS*HPKRMF
Trigger: AAACATCCTTTTTGGATGTCAGCTGGAGGAACCATA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILCCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGCTCCTGAGTCCCGTTaGCGATGGGGTCATCAGTCC +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLAPESR*RWGHQS
Trigger: GGACTGATGACCCCATCGTCAACGGGACTCAGGAGC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCCACCAAGCCAGCACTaGGGCTGTGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLPPSQH*GCAWRS
Trigger: TGATCTCCAGGCACAGCCTCAGTGCTGGCTTGGTGG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGATGCTCTCTGGGTTTaGAGTCGGCGGCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKDALWV*SRRRNS
Trigger: AGAATTACGCCGCCGACTTCAAACCCAGAGAGCATC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAGAGTAGAAGAGGTCTaGCCAGCAGACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLRVEEV*PADDPQ
Trigger: CTGTGGATCGTCTGCTGGGCAGACCTCTTCTACTCT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGCAACTTTAAGATCTaGGGCCCGGAAAACATCATC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSSNFKI*GPENII
Trigger: GATGATGTTTTCCGGGCCGCAGATCTTAAAGTTGCT...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTCCGTCACCAGCATaGCATTCTCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWECPSPA*HSPFAL
Trigger: CAAAGCAAATGGAGAATGGCATGCTGGTGACGGACA...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGTTGGCCTCAGCTTTCTaGAGTTCTGCGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLASAF*SSAVLL
Trigger: CAACAGCACCGCAGAACTGCAGAAAGCTGAGGCCAA...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTACAGAACGATGCAGTTaGCCACACACTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILTERCS*PHTPAA
Trigger: TGCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATCGTGACATTGATGTaGCTGAGAACGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGIVTLM*LRTKSR
Trigger: CCTGGACTTCGTTCTCAGGCACATCAATGTCACGAT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKSSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAGTTCTGACCAGATATaGCAGCTCTGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSSDQI*QLWGSH
Trigger: GTGTGAGCCCCAGAGCTGGCATATCTGGTCAGAACT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGACAGGCTTTAAAAGATaGTGCTTCCCTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLTGFKR*CFPVFF
Trigger: GAAGAAAACAGGGAAGCAGCATCTTTTAAAGCCTGT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSRLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAACAGAAACAGGAAGATaGCACATCCTGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALTETGR*HILTLQ
Trigger: CTGCAGGGTCAGGATGTGGCATCTTCCTGTTTCTGT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGATGCCCAAGAGAGTTaGGCTGACCAGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKDAQES*ADQKHW
Trigger: CCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATTTTGGATCTCAGGATaGCTAGGGCACACACTAGGG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALFWISG*LGHTLG
Trigger: CCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCATTCGCATCCACCTTaGAACTCTCTTTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKHSHPP*NSLSAG
Trigger: CCCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGNIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLDTKAV*ASRMLF
Trigger: GAACAACATCCTGGATGCCCAGACAGCCTTCGTGTC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKDTKAV*ASRMLF
Trigger: GAACAACATCCTGGATGCCCAGACAGCCTTCGTGTC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTGTTGGCCACGATGCTaGGGTAATAGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLCWPRC*GNRPSG
Trigger: ACCAGAAGGCCTATTACCCCAGCATCGTGGCCAACA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGAACAAAACAGGGTCCTaGGGGATGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWNKTGS*GMMVIL
Trigger: CAAGATCACCATCATCCCCCAGGACCCTGTTTTGTT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAACAAAACAGGGTCCTaGGGGATGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGNKTGS*GMMVIL
Trigger: CAAGATCACCATCATCCCCCAGGACCCTGTTTTGTT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEPSAHS*SSLSGR
Trigger: CCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAACCACTTGCATTCCTaGGGGCGTGAGGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILNHLHS*GREAVC
Trigger: ACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATTCCGGATTCCACTTTaGGCTCTAACGAGACACCTT +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGFRIPL*ALTRHL
Trigger: AAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
3UTR CAA 72 bp ACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTATACAACCAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSAGEIRGSRLN*VTRIFYTTNSS
Trigger: GGAGGAATTGGTTGTATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCCAAGAGAGTTGGGCTaGCCAGAAACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLPRELG*PETLGP
Trigger: TGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTTCCTCCTCTCCAGCTaGATTAAAAAGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TQRPTRFQTQGELLTISWFLLSS*IKKVAS
Trigger: GCTTGCTACCTTTTTAATTCAGCTGGAGAGGAGGAA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATTCCTCCTCTCCAGCTaGATTAAAAAGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGFLLSS*IKKVAS
Trigger: GCTTGCTACCTTTTTAATTCAGCTGGAGAGGAGGAA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTTCCTCCTCTCCAGCTaGATTAAAAAGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSFLLSS*IKKVAS
Trigger: GCTTGCTACCTTTTTAATTCAGCTGGAGAGGAGGAA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGGAGGATTTTCTGGCTaGATTGGTGATCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILGGFSG*IGDHQG
Trigger: GCCCTGGTGATCACCAATTCAGCCAGAAAATCCTCC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTTTCGTTCATCAGCTTaGTCCGATTGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSFRSSA*SDCLCS
Trigger: AGAGCAAAGACAATCGGATCAAGCTGATGAACGAAA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLEGAHG*QVGRLL
Trigger: AAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCGGGGATGGAGAAGGTaGTGCCATTCAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLRGWRR*CHSVWE
Trigger: CTCCCACACTGAATGGCATCACCTTCTCCATCCCCG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTATGGTTCCTCCAGCTaGCATCCAAAAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRYGSSS*HPKRMF
Trigger: AAACATCCTTTTTGGATGTCAGCTGGAGGAACCATA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCACGGCGATCCCTTGTaGAATGCCCAGGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLHGDPL*NAQGSI
Trigger: TATGGAGCCCTGGGCATTTCACAAGGGATCGCCGTG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGGTTTCCATTTCAGATaGCATCCGAACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALGFHFR*HPNQPV
Trigger: AACTGGCTGGTTCGGATGTCATCTGAAATGGAAACC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCTCCTTCTCAGTCTCTaGATACTCCTTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLLLLSL*ILLEPL
Trigger: GAGAGGCTCAAGGAGTATTCAGAGACTGAGAAGGAG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCT +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSEAVG*IWSLGS
Trigger: AGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCAGGCCGTCGCTCGATaGTGTCAGGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTQAVAR*CQVPAP
Trigger: AGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATGTCCGTCACCAGCATaGCATTCTCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALCPSPA*HSPFAL
Trigger: CAAAGCAAATGGAGAATGGCATGCTGGTGACGGACA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTGCAGCAGGTCCACGTaGAGACAGCGGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTCSRST*RQREAK
Trigger: CTTGGCTTCCCGCTGTCTGCACGTGGACCTGCTGCA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTGGGTGACCGCAGGATaGTGTGCAGCAGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTWVTAG*CAAGPR
Trigger: ACGTGGACCTGCTGCACAGCATCCTGCGGTCACCCA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGCTGTCTCCTGGATTTaGCAGGGCGCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLAVSWI*QGASFS
Trigger: TGAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGATGGCGGTGGCTGCTaGTTTGAATATGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEDGGGC*FEYVLV
Trigger: AACCAAAACATATTCAAAGCAGCAGCCACCGCCATC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGACAGGCTTTAAAAGATaGTGCTTCCCTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLTGFKR*CFPVFF
Trigger: GAAGAAAACAGGGAAGCAGCATCTTTTAAAGCCTGT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWERLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: TETNTVSNTGRASHYFLGRLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCGAAACAGGTCCACCTaGGCATCCTCTTTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKRNRST*ASSFKA
Trigger: AGCCTTAAAAGAGGATGCCCAGGTGGACCTGTTTCG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCATTCGCATCCACCTTaGAACTCTCTTTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILHSHPP*NSLSAG
Trigger: CCCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGTTCCACTCCTTCTGTaGGGACTTGACGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLVPLLL*GLDDQS
Trigger: GCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAAC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSNIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILDTKAV*ASRMLF
Trigger: GAACAACATCCTGGATGCCCAGACAGCCTTCGTGTC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILGSSSS*ERKILR
Trigger: CCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGCCAGCGCGGACACATaGTTACACATGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKASADT*LHMKRK
Trigger: CTTCCTTTTCATGTGTAACCATGTGTCCGCGCTGGC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAACAAAACAGGGTCCTaGGGGATGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALNKTGS*GMMVIL
Trigger: CAAGATCACCATCATCCCCCAGGACCCTGTTTTGTT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTCGAGTACTGGCTGAATaGGTCCAGGTTCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILRVLAE*VQVHSE
Trigger: CTCCGAATGAACCTGGACCCATTCAGCCAGTACTCG...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCTTCTCACTATTTCCTaGGAATGTTACTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRLLTIS*ECYFSA
Trigger: GGCTGAGAAGTAACATTCCCAGGAAATAGTGAGAAG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATTCCGGATTCCACTTTaGGCTCTAACGAGACACCTT +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALFRIPL*ALTRHL
Trigger: AAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCAGTTTTGGTTTTGTTaGGAGGTGTCATCTGAATGT +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGQFWFC*EVSSEC
Trigger: ACATTCAGATGACACCTCTCAACAAAACCAAAACTG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGATGCCGACCTTTTCTCCCCCATTGATCGTGACATTGATGTGCCTGAGAACGCAGTTTTGGTTTTGTTaGGAGGTGTCATCTGAATGT +
Preference number: 4 (lower is better)
Translates to: TMPTFSPPLIVTLMCLRTQFWFC*EVSSEC
Trigger: ACATTCAGATGACACCTCTCAACAAAACCAAAACTG...CGTTCTCAGGCACATCAATGTCACGATCAATGGGGGAGAAAAGGTCGGCATCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTTTCGTTCATCAGCTTaGTCCGATTGTCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LEVMGARSISKTCSPQTSFRSSA*SDCLCS
Trigger: AGAGCAAAGACAATCGGATCAAGCTGATGAACGAAA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCTGTTGTGGTGCCTGCTaGTGTCCCCACTATAGGAGG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLCCGAC*CPHYRR
Trigger: CCTCCTATAGTGGGGACATCAGCAGGCACCACAACA...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTCCGAGGCAGTAGGCTaGATTTGGTCACTAGGATCT +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILSEAVG*IWSLGS
Trigger: AGATCCTAGTGACCAAATTCAGCCTACTGCCTCGGA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAGCAACTTTAAGATCTaGGGCCCGGAAAACATCATC +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALSNFKI*GPENII
Trigger: GATGATGTTTTCCGGGCCGCAGATCTTAAAGTTGCT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCTGCTCCTGCTCTGTaGTGGCATAGGTACGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPAPAL*WHRYAG
Trigger: TCCTGCGTACCTATGCCAGCACAGAGCAGGAGCAGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLQLLP*TVRHQH
Trigger: ATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCAGCACTGAGGCTGTaGCTGGAGATCACCGCAAAC +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPALRL*LEITAN
Trigger: GTTTGCGGTGATCTCCAGGCACAGCCTCAGTGCTGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGAGCTGGCGCTGAGATaGTGGTTCCCAGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLELALR*WFPAFE
Trigger: CTCAAAAGCTGGGAACCAGCATCTCAGCGCCAGCTC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCACAGGCTTTAAAAGATaGTGCTTCCCTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSTGFKR*CFPVFF
Trigger: GAAGAAAACAGGGAAGCAGCATCTTTTAAAGCCTGT...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTTTTGGATCTCAGGATaGCTAGGGCACACACTAGGG +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILFWISG*LGHTLG
Trigger: CCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAACATCATCAGGTCGTaGATGGCCTTGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALNIIRS*MALKKK
Trigger: CTTCTTCTTCAAGGCCATCCACGACCTGATGATGTT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: AFRIPLWALTRHLKEQALCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCCACGGCCACGATGTTaGTTTCCATTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKPRPRC*FPFQMT
Trigger: TGTCATCTGAAATGGAAACCAACATCGTGGCCGTGG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAACAAAACAGGGTCCTaGGGGATGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLNKTGS*GMMVIL
Trigger: CAAGATCACCATCATCCCCCAGGACCCTGTTTTGTT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPSAHS*SSLSGR
Trigger: CCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAGCAAGTCTGAGTCTTaGGGCAGCCTCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTSKSES*GSLSSG
Trigger: GCCAGAGCTGAGGCTGCCCCAAGACTCAGACTTGCT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCACGAGGACCGTGTTCTaGAAGCACTTGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLTRTVF*KHLVKS
Trigger: CGACTTCACCAAGTGCTTTCAGAACACGGTCCTCGT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACAGTTTTGGTTTTGTTaGGAGGTGTCATCTGAATGT +
Preference number: 4 (lower is better)
Translates to: QRPTRFQTQGELLTISWEQFWFC*EVSSEC
Trigger: ACATTCAGATGACACCTCTCAACAAAACCAAAACTG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAGTAGACGTAGAAAGTaGTGTCACGAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSRRRK*CHETGP
Trigger: TGGACCTGTTTCGTGACATCACTTTCTACGTCTACT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAAGAAGCTCATGGGTaGCCGCAGGATGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTKEAHG*PQDAVQ
Trigger: CTGCACAGCATCCTGCGGTCACCCATGAGCTTCTTT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCAGCAAGGTCTCGTTaGAATGGGAATAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPARSR*NGNRPG
Trigger: CCCCGGTCTATTCCCATTTCAACGAGACCTTGCTGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGGTTTCCATTTCAGATaGCATCCGAACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILGFHFR*HPNQPV
Trigger: AACTGGCTGGTTCGGATGTCATCTGAAATGGAAACC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCTTGTCAGGAAGGGCTaGCACGAAGTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTLVRKG*HEVLQV
Trigger: CACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAGAGTAGAAGAGGTCTaGCCAGCAGACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLRVEEV*PADDPQ
Trigger: CTGTGGATCGTCTGCTGGGCAGACCTCTTCTACTCT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGAGCAACTTTAAGATCTaGGGCCCGGAAAACATCATC +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKSNFKI*GPENII
Trigger: GATGATGTTTTCCGGGCCGCAGATCTTAAAGTTGCT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCTGCTGAGCTGTCTCTaGAGTTGCTTCCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTLLSCL*SCFPAL
Trigger: CAGTGCAGGGAAGCAACTGCAGAGACAGCTCAGCAG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCGATCCCTTGTGAAATaGCCAGGGCTCCATAGACGC +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTRSLVK*PGLHRR
Trigger: GCGTCTATGGAGCCCTGGGCATTTCACAAGGGATCG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCACCTGTTGGCCACGATaGTGGGGTAATAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLTCWPR*WGNRPS
Trigger: AGAAGGCCTATTACCCCAGCATCGTGGCCAACAGGT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCATCTCAAAGACTTaGAGTCCACAGACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILSISKT*SPQTSA
Trigger: AGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAGCCTCAGCTCTGGCTaGCTTCCGGATTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTSLSSG*LPDSTL
Trigger: CAAAGTGGAATCCGGAAGGCAGCCAGAGCTGAGGCT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCGCCTAAAAGAAAGATaGTCTCTGGGTTTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKRLKER*SLGLKS
Trigger: CGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTGAACTCTCTTTCGGCTaGGCAGGATCCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTELSFG*AGSLEE
Trigger: CTCCTCCAAGGATCCTGCCCAGCCGAAAGAGAGTTC...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGTGTTGTTCTCGTCAATaGTCACGTAGACGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKCCSRQ*SRRRQM
Trigger: CATTTGCCGTCTACGTGACCATTGACGAGAACAACA...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGCTCAAAGAAGCTCATaGGTGACCGCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLAQRSS*VTAGCC
Trigger: ACAGCATCCTGCGGTCACCCATGAGCTTCTTTGAGC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCCAAGCCGGCGTCTTTaGCCATGCTGTAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLPSRRL*PCCRKD
Trigger: GTCTTTTCTACAGCATGGCCAAAGACGCCGGCTTGG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATTGATATTCAAAGATaGGTTCTTTTCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGIDIQR*VLFVSW
Trigger: CCAGGACACGAAAAGAACCCATCTTTGAATATCAAT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCATTGATATTCAAAGATaGGTTCTTTTCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFIDIQR*VLFVSW
Trigger: CCAGGACACGAAAAGAACCCATCTTTGAATATCAAT...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAGTGAGCATGATCCCTaGAGACTGAACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLSEHDP*RLNSLP
Trigger: AGGAAGGGAGTTCAGTCTTCAGGGATCATGCTCACT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGTAGACGTAGAAAGTaGTGTCACGAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILSRRRK*CHETGP
Trigger: TGGACCTGTTTCGTGACATCACTTTCTACGTCTACT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTTCTGGCTGAATTGGTaGTCACCAGGGCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTFWLNW*SPGPSD
Trigger: ATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGAAACCGGAGGATGTTaGACAAGGCCAAAGACACGA +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLETGGC*TRPKTR
Trigger: TCGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCATCCGAGTACTGGCTaGATGGGTCCAGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTHPSTG*MGPGSF
Trigger: GAATGAACCTGGACCCATTCAGCCAGTACTCGGATG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCTGCTGAGCTGTCCATaGGATCTGTGCAAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLLSCP*DLCKGL
Trigger: AAGACCTTTGCACAGATCTCATGGACAGCTCAGCAG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCCACCTGATACGTCTTaGTCTTCATCGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLPPDTS*SSSPSQ
Trigger: CTGTGATGGCGATGAAGACCAAGACGTATCAGGTGG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAGGGTGTGCGTGTTTTaGGTGGTTCGCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTRVCVF*VVRISV
Trigger: GACAGAGATGCGAACCACCCAAAACACGCACACCCT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTCTGAAAGCACTTGGTaGAGTCGGGGTTGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTSESTW*SRGCWY
Trigger: ATACCAGCAACCCCGACTTCACCAAGTGCTTTCAGA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTATGGTTCCTCCAGCTaGCATCCAAAAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILYGSSS*HPKRMF
Trigger: AAACATCCTTTTTGGATGTCAGCTGGAGGAACCATA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR TCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCGGTGGCTGCTGCTTTaGATATGTTTTGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLRWLLL*ICFGCL
Trigger: CAGACAACCAAAACATATTCAAAGCAGCAGCCACCG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCTGGCATATAGGCCCTaGAGTTCTGACCAGATATGC +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTLAYRP*SSDQIC
Trigger: GCATATCTGGTCAGAACTGCAGGGCCTATATGCCAG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCGGATGGCGGTGGCTaGTGCTTTGAATATGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPDGGG*CFEYVL
Trigger: CAAAACATATTCAAAGCAGCAGCCACCGCCATCCGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTACAGAAACAGGAAGATaGCACATCCTGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTTETGR*HILTLQ
Trigger: CTGCAGGGTCAGGATGTGGCATCTTCCTGTTTCTGT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTGTCCGTCACCAGCATaGCATTCTCCATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTCPSPA*HSPFAL
Trigger: CAAAGCAAATGGAGAATGGCATGCTGGTGACGGACA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR GCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCTCAACCACAAAACTaGAGCCCCAAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPQPQN*SPKEMK
Trigger: CTTCATTTCCTTGGGGCTGCAGTTTTGTGGTTGAGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAGTAGACGTAGAAAGTaGTGTCACGAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTSRRRK*CHETGP
Trigger: TGGACCTGTTTCGTGACATCACTTTCTACGTCTACT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000678422.1
CDS-3UTR CCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCTTCTCACTATTTCCTaGGAATGTTACTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTLLTIS*ECYFSA
Trigger: GGCTGAGAAGTAACATTCCCAGGAAATAGTGAGAAG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR TCA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCAGTTTTGGTTTTGTTaGGAGGTGTCATCTGAATGT +
Preference number: 4 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTQFWFC*EVSSEC
Trigger: ACATTCAGATGACACCTCTCAACAAAACCAAAACTG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CCA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCATTGATATTCAAAGATaGGTTCTTTTCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLIDIQR*VLFVSW
Trigger: CCAGGACACGAAAAGAACCCATCTTTGAATATCAAT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGTGCCCCCGCCGTCTTaGACAGGCCGTCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: RRGSAEAASGPKRELVELVPPPS*TGRRSM
Trigger: CATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCAC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS CCA 90 bp ATGGTGAGGACGGTGCAGTCCTCGAACTGTGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCCAGGTCCACGGCTGCCGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: MVRTVQSSNCVRMVD*MRSSVSRSTAAVAS
Trigger: TGAGGCCACGGCAGCCGTGGACCTGGAAACGGACGACCTCATCCAGTCCACCATCCGGACACAGTTCGAGGACTGCACCGTCCTCACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000676806.1
ENST00000677164.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGTGCCCCCGCCGTCTTaGACAGGCCGTCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPAVPPPS*TGRRSM
Trigger: CATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCAC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGCCCCCGCCGTCTTaGACAGGCCGTCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGVPPPS*TGRRSM
Trigger: CATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCAC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAGCTGTCTCCTGGATTaGCCAGGGCGCCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGSCLLD*PGRLLL
Trigger: GAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTGATGGCCAGCACCTaGTCCTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLMAST*SLNASS
Trigger: GGAGCTGGCATTCAAGGACAAGGTGCTGGCCATCAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGTGCCCCCGCCGTCTTaGACAGGCCGTCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLVPPPS*TGRRSM
Trigger: CATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCAC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAAGTGCCCCCGCCGTCTTaGACAGGCCGTCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: SSKARMTLTPSKVSLKWEVPPPS*TGRRSM
Trigger: CATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCAC...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACACGTGCCCCTCCACTTaGTCCATCTCAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDTCPST*SISAKR
Trigger: CCTCTTGGCTGAGATGGACAAAGTGGAGGGGCACGT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGAGCTGTCTCTGCAGTaGCTTCCCTGCACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGELSLQ*LPCTVR
Trigger: ACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCTC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGAGCTGTCTCTGCAGTaGCTTCCCTGCACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLELSLQ*LPCTVR
Trigger: ACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCTC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLSSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACACTGTGTCCAGCTCCTaGGAGAAGCGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDTVSSS*EKRFTR
Trigger: CCTGGTGAACCGCTTCTCCAAGGAGCTGGACACAGT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAACAGAACGATGCAGTaGCCCACACACTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGNRTMQ*PTHSSR
Trigger: GCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGTT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS GCA 90 bp CTTCCCTGCACTGTCCGTCACCAGCATGCCATTCTCCATTTGCTTTaGTTCCTTCCCTGGACCGCTGACGCCCGTGACCCCGTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LPCTVRHQHAILHLL*FLPWTADARDPVLL
Trigger: GAGGAGAACGGGGTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAGCAAATGGAGAATGGCATGCTGGTGACGGACAGTGCAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399410.8
ENST00000572882.3
ENST00000575422.5
ENST00000621144.4
ENST00000634072.1
ENST00000677164.1
ENST00000678422.1
CDS GCA 90 bp CTTCCCTGCACTGTCCGTCACCAGCATGCCATTCTCCATTTGCTTTaGTTCCTTCCCTGGACCGCTGACGCCCGTGACCCCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPCTVRHQHAILHLL*FLPWTADARDPCFL
Trigger: GAGGAAGCAGGGGTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAGCAAATGGAGAATGGCATGCTGGTGACGGACAGTGCAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000576557.1
ENST00000621659.2
ENST00000622828.3
ENST00000633802.1
CDS CCA 90 bp GTCCGTCACCAGCATGCCATTCTCCATTTGCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGACCCCGTTCTCCTCTGCATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VRHQHAILHLLCFLP*TADARDPVLLCILL
Trigger: GAGCAGGATGCAGAGGAGAACGGGGTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAGCAAATGGAGAATGGCATGCTGGTGACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399410.8
ENST00000572882.3
ENST00000575422.5
ENST00000621144.4
ENST00000634072.1
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDSFCGD*TIKAST
Trigger: GGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCCAATGACAGCGGTCTaGATCCTCATGCCACTGACG +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGPMTAV*ILMPLT
Trigger: CGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCTGATGGCCAGCACCTaGTCCTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASLMAST*SLNASS
Trigger: GGAGCTGGCATTCAAGGACAAGGTGCTGGCCATCAG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGTGCCCCCGCCGTCTTaGACAGGCCGTCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPVPPPS*TGRRSM
Trigger: CATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCAC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWACPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGACTGTGTCCAGCTCCTaGGAGAAGCGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: RRGSAEAASGPKRELVELTVSSS*EKRFTR
Trigger: CCTGGTGAACCGCTTCTCCAAGGAGCTGGACACAGT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGACTGTGTCCAGCTCCTaGGAGAAGCGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWTVSSS*EKRFTR
Trigger: CCTGGTGAACCGCTTCTCCAAGGAGCTGGACACAGT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAACAGAACGATGCAGTaGCCCACACACTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWNRTMQ*PTHSSR
Trigger: GCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGTT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAGCTGTCTCCTGGATTaGCCAGGGCGCCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRSCLLD*PGRLLL
Trigger: GAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCAGCTGTCTCCTGGATTaGCCAGGGCGCCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSSCLLD*PGRLLL
Trigger: GAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCT...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTAGCTGTCTCCTGGATTaGCCAGGGCGCCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: CGAVVVPADVPTIGGGAASCLLD*PGRLLL
Trigger: GAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCT...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS GCA 90 bp CCGTACAGATGCCTTGGGCAGGGTCGGAGGGCTCCCTGCTGGGACTaGTATTGTGGGTCTGAACCATGGCATAAGAGACGGAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: PYRCLGQGRRAPCWD*YCGSEPWHKRRSVS
Trigger: GGAAACACTCCGTCTCTTATGCCATGGTTCAGACCCACAATAGCAGTCCCAGCAGGGAGCCCTCCGACCCTGCCCAAGGCATCTGTACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574761.1
ENST00000632338.1
CDS CCA 90 bp TGGCGCTGCCCGACACTGAGGTTCTCCCCGCCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: WRCPTLRFSPPSAHS*SSLSGRADTKSFRW
Trigger: CCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGGCGGGGAGAACCTCAGTGTCGGGCAGCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000676806.1
ENST00000677164.1
CDS CCA 90 bp TGTCTGGAGAAGCAAAGCACAAGGGTGTCAACCGTACAGATGCCTTaGGCAGGGTCGGAGGGCTCCCTGCTGGGACTGCTATTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: CLEKQSTRVSTVQMP*AGSEGSLLGLLLWV
Trigger: GACCCACAATAGCAGTCCCAGCAGGGAGCCCTCCGACCCTGCCCAAGGCATCTGTACGGTTGACACCCTTGTGCTTTGCTTCTCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574761.1
ENST00000632338.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTCATTCGCATCCACCTaGGAACTCTCTTTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDSFAST*ELSFGW
Trigger: CCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATGA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSFCGD*TIKAST
Trigger: GGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTATCGCCATCACAGCATaGACGGGCACCATGAGGACC +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRIAITA*TGTMRT
Trigger: GGTCCTCATGGTGCCCGTCAATGCTGTGATGGCGAT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTATCGCCATCACAGCATaGACGGGCACCATGAGGACC +
Preference number: 5 (lower is better)
Translates to: CGAVVVPADVPTIGGGAAIAITA*TGTMRT
Trigger: GGTCCTCATGGTGCCCGTCAATGCTGTGATGGCGAT...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACTGATGGCCAGCACCTaGTCCTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPLMAST*SLNASS
Trigger: GGAGCTGGCATTCAAGGACAAGGTGCTGGCCATCAG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCACGTGCCCCTCCACTTaGTCCATCTCAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSTCPST*SISAKR
Trigger: CCTCTTGGCTGAGATGGACAAAGTGGAGGGGCACGT...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTACGTGCCCCTCCACTTaGTCCATCTCAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRTCPST*SISAKR
Trigger: CCTCTTGGCTGAGATGGACAAAGTGGAGGGGCACGT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPSSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPACPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCACTGTGTCCAGCTCCTaGGAGAAGCGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSTVSSS*EKRFTR
Trigger: CCTGGTGAACCGCTTCTCCAAGGAGCTGGACACAGT...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: VTLVDEALLLLEGSNDADSCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS CCA 90 bp TCTTTGACAGGCCGTCGCTCGATGCTGTCAGGTTCCAGCTCCTCATaGGAGAGAAAGATCCTCAGGCGTTTGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLTGRRSMLSGSSSS*ERKILRRLRETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTTTCTCTCCCATGAGGAGCTGGAACCTGACAGCATCGAGCGACGGCCTGTCAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS CCA 90 bp AGAAAAGGTGACTTAGCCCAGATATCACCCTGGACCCTCCCAGGCTaGGATGGGGGCTCCTTCTCTGTGATTTCCCAGGCCCTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: RKGDLAQISPWTLPG*DGGSFSVISQALKQ
Trigger: CTGCTTGAGGGCCTGGGAAATCACAGAGAAGGAGCCCCCATCCCAGCCTGGGAGGGTCCAGGGTGATATCTGGGCTAAGTCACCTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576557.1
ENST00000633802.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASSDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCTCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: WSSLSGRADTKSFRWASSSFCGD*TIKAST
Trigger: GGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGA...GGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCCAATGACAGCGGTCTaGATCCTCATGCCACTGACG +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRPMTAV*ILMPLT
Trigger: CGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCCACAGACATGAGGTaGACAATCTCCCCGACCGTG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASTDMR*TISPTV
Trigger: CACGGTCGGGGAGATTGTCAACCTCATGTCTGTGGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCACGTGCCCCTCCACTTaGTCCATCTCAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGTCPST*SISAKR
Trigger: CCTCTTGGCTGAGATGGACAAAGTGGAGGGGCACGT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGSSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGCPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCACTGTGTCCAGCTCCTaGGAGAAGCGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGTVSSS*EKRFTR
Trigger: CCTGGTGAACCGCTTCTCCAAGGAGCTGGACACAGT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPAVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCTTCGGCAGACTCGTaGATCCGAAATAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPSADS*IRNKPR
Trigger: CCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACCTTCGGCAGACTCGTaGATCCGAAATAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPPSADS*IRNKPR
Trigger: CCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAGG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPASCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGGACAGGTTCACGCCCTaGATAGCCACGTGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLDRFTP*IATCPS
Trigger: GGAGGGGCACGTGGCTATCAAGGGCGTGAACCTGTC...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572882.3
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAACCAAGATCCGCGTCTaGATAGCCACGTGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGTKIRV*IATCPS
Trigger: GGAGGGGCACGTGGCTATCAAGACGCGGATCTTGGT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677164.1
CDS TCA 90 bp CCACACAGAGCCAGATGCACATGTGCCCAAGAGGAGAAGAAAAGGTaGCTTAGCCCAGATATCACCCTGGACCCTCCCAGGCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: PHRARCTCAQEEKKR*LSPDITLDPPRLGW
Trigger: CCATCCCAGCCTGGGAGGGTCCAGGGTGATATCTGGGCTAAGTCACCTTTTCTTCTCCTCTTGGGCACATGTGCATCTGGCTCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576557.1
ENST00000633802.1
CDS TCA 90 bp GGAAAAATGTGGCTTCACTCACCAGAAAGGGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACAGGTAGGCAGACTTCTTCAGCACCT +
Preference number: 5 (lower is better)
Translates to: GKMWLHSPERACRPR*RCPRLTGRQTSSAP
Trigger: AGGTGCTGAAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGCCCTTTCTGGTGAGTGAAGCCACATTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574224.2
ENST00000632908.1
CDS CCA 90 bp CCAATGACAGCGGTCTTGATCCTCATGCCACTGACGAAGCAGATGTaGAAGTACTGGTGCAGCACGAGGGTCTGCAGGCAGGCAGTGACA +
Preference number: 5 (lower is better)
Translates to: PMTAVLILMPLTKQM*KYWCSTRVCRQAVT
Trigger: TGTCACTGCCTGCCTGCAGACCCTCGTGCTGCACCAGTACTTCCACATCTGCTTCGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000632908.1
ENST00000677164.1
ENST00000678422.1
ENST00000679043.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRSDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCATCATTCGCATCCACCTaGGAACTCTCTTTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPSFAST*ELSFGW
Trigger: CCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATGA...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCATTCGCATCCACCTaGGAACTCTCTTTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASFAST*ELSFGW
Trigger: CCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWARSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTCCAATGACAGCGGTCTaGATCCTCATGCCACTGACG +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPAPMTAV*ILMPLT
Trigger: CGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGGATTTTCTGGCTGAATaGGTGATCACCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RRGSAEAASGPKRELVELDFLAE*VITRAF
Trigger: GAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATC...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGATTTTCTGGCTGAATaGGTGATCACCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWDFLAE*VITRAF
Trigger: GAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTCCACAGACATGAGGTaGACAATCTCCCCGACCGTG +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPASTDMR*TISPTV
Trigger: CACGGTCGGGGAGATTGTCAACCTCATGTCTGTGGA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATTCCACAGACATGAGGTaGACAATCTCCCCGACCGTG +
Preference number: 5 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHSTDMR*TISPTV
Trigger: CACGGTCGGGGAGATTGTCAACCTCATGTCTGTGGA...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: RRGSAEAASGPKRELVELLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAACGTGCCCCTCCACTTaGTCCATCTCAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGTCPST*SISAKR
Trigger: CCTCTTGGCTGAGATGGACAAAGTGGAGGGGCACGT...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTACCAAGATCCGCGTCTaGTTCTTCAGCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRTKIRV*FFSIPL
Trigger: CAAGGGGATGCTGAAGAACAAGACGCGGATCTTGGT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGAGCTGTCTCTGCAGTaGCTTCCCTGCACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPELSLQ*LPCTVR
Trigger: ACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCTC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPSSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSEQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAAGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: SSKARMTLTPSKVSLKWEVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGAGCTGTCTCCTGGATTaGCCAGGGCGCCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLSCLLD*PGRLLL
Trigger: GAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGTFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCCTTCGGCAGACTCGTaGATCCGAAATAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGPSADS*IRNKPR
Trigger: CCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAGG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCGATCTTGGCGATGTaGATGCCATCGATGATGATC +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPILAM*MPSMMI
Trigger: GATCATCATCGATGGCATCAACATCGCCAAGATCGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGSCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAHSWSS*SGRADT
Trigger: CGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACTCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTT +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDSWISP*SKTITL
Trigger: AAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGA...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGTCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTG +
Preference number: 5 (lower is better)
Translates to: RRGSAEAASGPKRELVELSWISP*SKTITL
Trigger: CAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGA...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHSDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATCAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTGATTTTCTGGCTGAATaGGTGATCACCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: CGAVVVPADVPTIGGGAADFLAE*VITRAF
Trigger: GAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATC...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTATCGCCATCACAGCATaGACGGGCACCATGAGGACC +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVIAITA*TGTMRT
Trigger: GGTCCTCATGGTGCCCGTCAATGCTGTGATGGCGAT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GTCACTCTGGTGGATGAAGCGCTCCTGCTCCTCGAAGGCTCGAATGACGCTGACTTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: VTLVDEALLLLEGSNDADLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...GTCAGCGTCATTCGAGCCTTCGAGGAGCAGGAGCGCTTCATCCACCAGAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCTGATGGCCAGCACCTaGTCCTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSELMAST*SLNASS
Trigger: GGAGCTGGCATTCAAGGACAAGGTGCTGGCCATCAG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGACGTGCCCCTCCACTTaGTCCATCTCAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSETCPST*SISAKR
Trigger: CCTCTTGGCTGAGATGGACAAAGTGGAGGGGCACGT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSESSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSCPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGACTGTGTCCAGCTCCTaGGAGAAGCGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSETVSSS*EKRFTR
Trigger: CCTGGTGAACCGCTTCTCCAAGGAGCTGGACACAGT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGACTGTGTCCAGCTCCTaGGAGAAGCGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLTVSSS*EKRFTR
Trigger: CCTGGTGAACCGCTTCTCCAAGGAGCTGGACACAGT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGACAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTAACAGAACGATGCAGTaGCCCACACACTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVNRTMQ*PTHSSR
Trigger: GCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGTT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGAACAGAACGATGCAGTaGCCCACACACTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLNRTMQ*PTHSSR
Trigger: GCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGTT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSEVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGAGCTGTCTCCTGGATTaGCCAGGGCGCCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRSCLLD*PGRLLL
Trigger: GAGAAGGAGGCGCCCTGGCAAATCCAGGAGACAGCT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCCCATTGATCGTGACATaGATGTGCCTGAGAACGAAG +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASPLIVT*MCLRTK
Trigger: CTTCGTTCTCAGGCACATCAATGTCACGATCAATGG...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGCCATTGATCGTGACATaGATGTGCCTGAGAACGAAG +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWPLIVT*MCLRTK
Trigger: CTTCGTTCTCAGGCACATCAATGTCACGATCAATGG...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCCGATCTTGGCGATGTaGATGCCATCGATGATGATC +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAPILAM*MPSMMI
Trigger: GATCATCATCGATGGCATCAACATCGCCAAGATCGG...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACCATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHHSWSS*SGRADT
Trigger: CGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATG...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGCGGTGCTGTTGTGGTGCCTGCTGATGTCCCCACTATAGGAGGAGGAGCTGCTAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 5 (lower is better)
Translates to: CGAVVVPADVPTIGGGAAKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...AGCAGCTCCTCCTCCTATAGTGGGGACATCAGCAGGCACCACAACAGCACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GGAAGCCACGTAGAACCTCTGGACGAAGAAGTAGATGAGGCCAAGGGGCGGGATCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 5 (lower is better)
Translates to: GSHVEPLDEEVDEAKGRDLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...ATCCCGCCCCTTGGCCTCATCTACTTCTTCGTCCAGAGGTTCTACGTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGCGTGGGAGTGCAGAGGCTGCCTCTGGCCCAAAACGAGAACTGGTAGAGCTGAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: RRGSAEAASGPKRELVELKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...CAGCTCTACCAGTTCTCGTTTTGGGCCAGAGGCAGCCTCTGCACTCCCACGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLSDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLSFCGD*TIKAST
Trigger: GGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLRSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCCAATGACAGCGGTCTaGATCCTCATGCCACTGACG +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLPMTAV*ILMPLT
Trigger: CGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTCCACAGACATGAGGTaGACAATCTCCCCGACCGTG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSESTDMR*TISPTV
Trigger: CACGGTCGGGGAGATTGTCAACCTCATGTCTGTGGA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCTTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGATCAGCTTGATCCGATaGTCTTTGCTCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWISLIR*SLLFMW
Trigger: CCACATGAAGAGCAAAGACAATCGGATCAAGCTGAT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SVWEAWFTRGTDSSLGAGISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...GCCAGCGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGGGGTACTGACTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: PGVLTPPWALAYRPCSSDISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...GTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAGTCAGTACCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AAGATGCCACATCCTGACCCTGCAGAGGACATGGCTGGAACCCTCGCCGAGGCCATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: KMPHPDPAEDMAGTLAEAISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...GGCCTCGGCGAGGGTTCCAGCCATGTCCTCTGCAGGGTCAGGATGTGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTGAGGCTGAGCACTTTGATCCCATaGAGAATTTCGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LLRGKHQETTCIPGGVRLSTLIP*RISFIS
Trigger: GCTGATGAACGAAATTCTCAATGGGATCAAAGTGCT...CAGCCTCACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCCTGATGGCCAGCACCTaGTCCTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFLMAST*SLNASS
Trigger: GGAGCTGGCATTCAAGGACAAGGTGCTGGCCATCAG...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSEPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWCPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWECPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSCPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWEQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCACCATTGATCGTGACATaGATGTGCCTGAGAACGAAG +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPPLIVT*MCLRTK
Trigger: CTTCGTTCTCAGGCACATCAATGTCACGATCAATGG...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCATTGATCGTGACATaGATGTGCCTGAGAACGAAG +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPLIVT*MCLRTK
Trigger: CTTCGTTCTCAGGCACATCAATGTCACGATCAATGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPHSWSS*SGRADT
Trigger: CGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTT +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSSWISP*SKTITL
Trigger: AAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTT +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWASWISP*SKTITL
Trigger: AAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp GCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGGGGGCGTTCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTT +
Preference number: 5 (lower is better)
Translates to: AKTPPWEAPGNHLHSWGRSWISP*SKTITL
Trigger: AAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGA...ACGCCCCCAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACACAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: RADTKSFRWASSRDVQTSGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...AGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TCCTCGAAGGCTCGAATGACGCTGACCCCCAGCAAGGTCTCGTTGAAATGGGAACTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 5 (lower is better)
Translates to: SSKARMTLTPSKVSLKWELEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...TTCCCATTTCAACGAGACCTTGCTGGGGGTCAGCGTCATTCGAGCCTTCGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCCCACTAGAGGCGACTaGTTGTCAAAAGGAAAGAAC +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSPTRGD*LSKGKN
Trigger: GTTCTTTCCTTTTGACAACAAGTCGCCTCTAGTGGG...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTTGGTGAAGTCGGGGTaGCTGGTATTCCACGTGACA +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLLVKSG*LVFHVT
Trigger: TGTCACGTGGAATACCAGCAACCCCGACTTCACCAA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSESDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGCAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVRSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSERSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTCCACAGACATGAGGTaGACAATCTCCCCGACCGTG +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRSTDMR*TISPTV
Trigger: CACGGTCGGGGAGATTGTCAACCTCATGTCTGTGGA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATCGCCATCACAGCATaGACGGGCACCATGAGGACC +
Preference number: 5 (lower is better)
Translates to: TETNTVSNTGRASHYFLGIAITA*TGTMRT
Trigger: GGTCCTCATGGTGCCCGTCAATGCTGTGATGGCGAT...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RADTKSFRWASSRDVQTSISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...AGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp CCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCTCTGGAGCACTTTGATCCCATaGAGAATTTCGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: PWALAYRPCSSDQICQLWSTLIP*RISFIS
Trigger: GCTGATGAACGAAATTCTCAATGGGATCAAAGTGCT...CCAGAGCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCAGCACTTTGATCCCATaGAGAATTTCGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASSTLIP*RISFIS
Trigger: GCTGATGAACGAAATTCTCAATGGGATCAAAGTGCT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSEGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGACCAAGATCCGCGTCTaGTTCTTCAGCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLTKIRV*FFSIPL
Trigger: CAAGGGGATGCTGAAGAACAAGACGCGGATCTTGGT...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CAA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGACCAAGATCCGCGTCTaGTTCTTCAGCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPTKIRV*FFSIPL
Trigger: CAAGGGGATGCTGAAGAACAAGACGCGGATCTTGGT...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTACCAAGATCCGCGTCTaGTTCTTCAGCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVTKIRV*FFSIPL
Trigger: CAAGGGGATGCTGAAGAACAAGACGCGGATCTTGGT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGAGCTGTCTCTGCAGTaGCTTCCCTGCACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWEELSLQ*LPCTVR
Trigger: ACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCTC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATGCCCTGTCTGCGCCTaGTCAGCCTCCATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALCPVCA*SASISF
Trigger: GAAGCTGATGGAGGCTGACAAGGCGCAGACAGGGCA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGTFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCCTTCGGCAGACTCGTaGATCCGAAATAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSPSADS*IRNKPR
Trigger: CCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAGG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACCGATCTTGGCGATGTaGATGCCATCGATGATGATC +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPPILAM*MPSMMI
Trigger: GATCATCATCGATGGCATCAACATCGCCAAGATCGG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWSCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVHSWSS*SGRADT
Trigger: CGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGCATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLHSWSS*SGRADT
Trigger: CGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATG...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTTCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTT +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPASWISP*SKTITL
Trigger: AAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGA...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSELEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVLEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTCCTCCCTGGGCGCTGGCATATAGGCCCTGCAGTTCTGACCAGATATGCCAGCACTAGAGGCGACTTGTaGTCAAAAGGAAAGAACAGA +
Preference number: 5 (lower is better)
Translates to: LLPGRWHIGPAVLTRYASTRGDL*SKGKNR
Trigger: TCTGTTCTTTCCTTTTGACAACAAGTCGCCTCTAGT...GCTGGCATATCTGGTCAGAACTGCAGGGCCTATATGCCAGCGCCCAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCCCAAAACGAGAACTGGTAGAGCTGGCGCTGAGATGCTGGTTCCCAGCTAGTGATCTCTACAACTaGCCCTTTCTGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: SGPKRELVELALRCWFPASDLYN*PFLATA
Trigger: AGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT...AGCTGGGAACCAGCATCTCAGCGCCAGCTCTACCAGTTCTCGTTTTGGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS CCA 90 bp AAGCAGCATGGTGATGCCCAAGAGAGTTGGGCTGACCAGAAACACTaGGGCCAGGAATATGCCCCGACTTCTTTCCCAGAAAGAGTAGAA +
Preference number: 5 (lower is better)
Translates to: KQHGDAQESWADQKH*GQEYAPTSFPERVE
Trigger: TTCTACTCTTTCTGGGAAAGAAGTCGGGGCATATTCCTGGCCCCAGTGTTTCTGGTCAGCCCAACTCTCTTGGGCATCACCATGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
ENST00000679043.1
CDS CCA 90 bp GGTCGGAGGGCTCCCTGCTGGGACTGCTATTGTGGGTCTGAACCATaGCATAAGAGACGGAGTGTTTCCACATGCACACATGTAAACATA +
Preference number: 5 (lower is better)
Translates to: GRRAPCWDCYCGSEP*HKRRSVSTCTHVNI
Trigger: TATGTTTACATGTGTGCATGTGGAAACACTCCGTCTCTTATGCCATGGTTCAGACCCACAATAGCAGTCCCAGCAGGGAGCCCTCCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574761.1
ENST00000632338.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTTGGTGAAGTCGGGGTaGCTGGTATTCCACGTGACA +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGLVKSG*LVFHVT
Trigger: TGTCACGTGGAATACCAGCAACCCCGACTTCACCAA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAGGTCCGATGGGGCGCCGTACTCCTGGATTTCTCCTTTGTCCAAGACGATCACAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: EVRWGAVLLDFSFVQDDHKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...GTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRSDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCAAAACAGGCACGACTaGTTCCGACGTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGQNRHD*FRRVLL
Trigger: AAGGAGGACACGTCGGAACAAGTCGTGCCTGTTTTG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGGCTGCTTCCTAGTCTaGGCGCATTCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: TETNTVSNTGRASHYFLGGCFLV*AHSFFQ
Trigger: CTGGAAGAAGGAATGCGCCAAGACTAGGAAGCAGCC...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGATCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TETNTVSNTGRASHYFLGSFCGD*TIKAST
Trigger: GGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGA...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWSFCGD*TIKAST
Trigger: GGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWESFCGD*TIKAST
Trigger: GGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGA...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTTCTGCACATTCATGGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: PSAHSWSSLSGRADTKSFRSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...GAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGATTTTCTGGCTGAATaGGTGATCACCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSEDFLAE*VITRAF
Trigger: GAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGATTTTCTGGCTGAATaGGTGATCACCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVDFLAE*VITRAF
Trigger: GAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCATCAGCTTGATCCGATaGTCTTTGCTCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: LVSVWEAWFTRGTDSSLGISLIR*SLLFMW
Trigger: CCACATGAAGAGCAAAGACAATCGGATCAAGCTGAT...GCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GAAACCACTTGCATTCCTGGGGGCGTGAGGCTGTGTGTCTGTCTCAGGGCACCAAGCACTTTGATCCCATaGAGAATTTCGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: ETTCIPGGVRLCVCLRAPSTLIP*RISFIS
Trigger: GCTGATGAACGAAATTCTCAATGGGATCAAAGTGCT...TGGTGCCCTGAGACAGACACACAGCCTCACGCCCCCAGGAATGCAAGTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGGAAACCGGAGGATGTaGAACAAGGCCAAAGACACG +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRGNRRM*NKAKDT
Trigger: CGTGTCTTTGGCCTTGTTCAACATCCTCCGGTTTCC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCGTGCCCCCGCCGTCTTaGACAGGCCGTCGCTCGATG +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLVPPPS*TGRRSM
Trigger: CATCGAGCGACGGCCTGTCAAAGACGGCGGGGGCAC...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCAGTACACGGAAAGCTaGACCTGCCCTGTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKQYTES*TCPVCA
Trigger: GGCGCAGACAGGGCAGGTCAAGCTTTCCGTGTACTG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSREPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACCATTGATCGTGACATaGATGTGCCTGAGAACGAAG +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPPLIVT*MCLRTK
Trigger: CTTCGTTCTCAGGCACATCAATGTCACGATCAATGG...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGCCTTCGGCAGACTCGTaGATCCGAAATAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWPSADS*IRNKPR
Trigger: CCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAGG...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGACCTTCGGCAGACTCGTaGATCCGAAATAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TETNTVSNTGRASHYFLGPSADS*IRNKPR
Trigger: CCTGGGCTTATTTCGGATCAACGAGTCTGCCGAAGG...TCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTCCGATCTTGGCGATGTaGATGCCATCGATGATGATC +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVPILAM*MPSMMI
Trigger: GATCATCATCGATGGCATCAACATCGCCAAGATCGG...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGGGATGATGGTGATCTaGAAGCGGAGGTCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALGMMVI*KRRSCR
Trigger: CCTGCACGACCTCCGCTTCAAGATCACCATCATCCC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCCATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSHSWSS*SGRADT
Trigger: CGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATG...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGATCCTGGATTTCTCCTTaGTCCAAGACGATCACCCTT +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGSWISP*SKTITL
Trigger: AAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGA...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGLEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGCTCAAATCTCTGCAGTaGCTTCCCTGCACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGLKSLQ*LPCTVR
Trigger: ACGGACAGTGCAGGGAAGCAACTGCAGAGATTTGAG...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS CCA 90 bp CTGTGCGACTCCACATGCACAGAACACTCTCTTTCTCTGCTTGAATaGTTCAACCCCAGACGCTTGGCACGAATGGCGCTAGGCATTATT +
Preference number: 5 (lower is better)
Translates to: LCDSTCTEHSLSLLE*FNPRRLARMALGII
Trigger: AATAATGCCTAGCGCCATTCGTGCCAAGCGTCTGGGGTTGAACCATTCAAGCAGAGAAAGAGAGTGTTCTGTGCATGTGGAGTCGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575422.5
ENST00000634072.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGTCATTCGCATCCACCTaGGAACTCTCTTTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWSFAST*ELSFGW
Trigger: CCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATGA...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACCAATGACAGCGGTCTaGATCCTCATGCCACTGACG +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALPMTAV*ILMPLT
Trigger: CGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGATTTTCTGGCTGAATaGGTGATCACCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRDFLAE*VITRAF
Trigger: GAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCATCGCCATCACAGCATaGACGGGCACCATGAGGACC +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLIAITA*TGTMRT
Trigger: GGTCCTCATGGTGCCCGTCAATGCTGTGATGGCGAT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCTGATGGCCAGCACCTaGTCCTTGAATGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLMAST*SLNASS
Trigger: GGAGCTGGCATTCAAGGACAAGGTGCTGGCCATCAG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGACCAAGATCCGCGTCTaGTTCTTCAGCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWTKIRV*FFSIPL
Trigger: CAAGGGGATGCTGAAGAACAAGACGCGGATCTTGGT...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTACCCATCTCAGAGATCTaGCCGCCACTCATGACGATG +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALPISEI*PPLMTM
Trigger: CATCGTCATGAGTGGCGGCAAGATCTCTGAGATGGG...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGAGCTGTCTCTGCAGTaGCTTCCCTGCACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKELSLQ*LPCTVR
Trigger: ACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCTC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWEEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACAACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 5 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTTFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGCCGATCTTGGCGATGTaGATGCCATCGATGATGATC +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRPILAM*MPSMMI
Trigger: GATCATCATCGATGGCATCAACATCGCCAAGATCGG...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLSCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGTCGTGCAGGCCGATCTaGGCGATGTTGATGCCATCG +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKSCRPI*AMLMPS
Trigger: CGATGGCATCAACATCGCCAAGATCGGCCTGCACGA...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACG +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSHSWSS*SGRADT
Trigger: CGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCCCCTGGCCCTACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: IPWPYSSRSRLAVSPTRSFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...GGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTAGGGCCAGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTTCAGTGTGGGAGGCTTGGTTTACCAGGGGTACTGACTCCTCCCTGGGCGTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WFQCGRLGLPGVLTPPWAFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...CGCCCAGGGAGGAGTCAGTACCCCTGGTAAACCAAGCCTCCCACACTGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TACAGTTCCAGGTCCAGGTTAGCCGTTAGTCCAACCAGGTCCCTTCCAGGAGGAGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: YSSRSRLAVSPTRSLPGGGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...TCCTCCTGGAAGGGACCTGGTTGGACTAACGGCTAACCTGGACCTGGAACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ATCAGTCCAGAGGCTGAGCCAATAGTTGGAAGCCAGCGCGGACACATGGTTACACCCACTAGAGGCGACTaGTTGTCAAAAGGAAAGAAC +
Preference number: 5 (lower is better)
Translates to: ISPEAEPIVGSQRGHMVTPTRGD*LSKGKN
Trigger: GTTCTTTCCTTTTGACAACAAGTCGCCTCTAGTGGG...TGTAACCATGTGTCCGCGCTGGCTTCCAACTATTGGCTCAGCCTCTGGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALRSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GGAAGCCACGTAGAACCTCTGGACGAAGAAGTAGATGAGGCCAAGGGGCGGGATGTGTCATTCACGAACTaGATGAGCAACTTTAAGATC +
Preference number: 5 (lower is better)
Translates to: GSHVEPLDEEVDEAKGRDVSFTN*MSNFKI
Trigger: GATCTTAAAGTTGCTCATCAAGTTCGTGAATGACAC...ATCCCGCCCCTTGGCCTCATCTACTTCTTCGTCCAGAGGTTCTACGTGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCAATGACAGCGGTCTaGATCCTCATGCCACTGACG +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPMTAV*ILMPLT
Trigger: CGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGATCAGCTTGATCCGATaGTCTTTGCTCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSEISLIR*SLLFMW
Trigger: CCACATGAAGAGCAAAGACAATCGGATCAAGCTGAT...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGATCAGCTTGATCCGATaGTCTTTGCTCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPISLIR*SLLFMW
Trigger: CCACATGAAGAGCAAAGACAATCGGATCAAGCTGAT...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCACTTGCATTCCTGATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SGCQNSSVGSTRKPLAFLISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...CAGGAATGCAAGTGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCTCCAGAAGTCTGGCTGCCAAAACTCCTCCGTGGGAAGCACCAGGAAACCAAGCACTTTGATCCCATaGAGAATTTCGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: FLQKSGCQNSSVGSTRKPSTLIP*RISFIS
Trigger: GCTGATGAACGAAATTCTCAATGGGATCAAAGTGCT...TGGTTTCCTGGTGCTTCCCACGGAGGAGTTTTGGCAGCCAGACTTCTGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILKILRR*RETLAC
Trigger: GCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTGAGCTGTCTCTGCAGTaGCTTCCCTGCACTGTCCGT +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILELSLQ*LPCTVR
Trigger: ACGGACAGTGCAGGGAAGCAACTGCAGAGACAGCTC...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAGAGCCCATGAACATCTaGATGACCTCCGGGATCATG +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALEPMNI*MTSGIM
Trigger: CATGATCCCGGAGGTCATCAAGATGTTCATGGGCTC...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGTCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSTFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAACCGATCTTGGCGATGTaGATGCCATCGATGATGATC +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWEPILAM*MPSMMI
Trigger: GATCATCATCGATGGCATCAACATCGCCAAGATCGG...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CTGACACGAAGTCCTTCAGGTGGGCCAGCTCCAGGGACGTCCAGACTTCTTCATTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LTRSPSGGPAPGTSRLLHFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...ATGAAGAAGTCTGGACGTCCCTGGAGCTGGCCCACCTGAAGGACTTCGTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCGCGGTGGCTGCTGCTTaGAATATGTTTTGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSAVAAA*NMFWLS
Trigger: AGACAACCAAAACATATTCAAAGCAGCAGCCACCGC...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCAGGGTGTGCGTGTTTaGGGTGGTTCGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLQGVRV*GGSHLC
Trigger: ACAGAGATGCGAACCACCCAAAACACGCACACCCTG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTCCACAGACATGAGGTaGACAATCTCCCCGACCGTG +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILSTDMR*TISPTV
Trigger: CACGGTCGGGGAGATTGTCAACCTCATGTCTGTGGA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGATCAGCTTGATCCGATaGTCTTTGCTCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRISLIR*SLLFMW
Trigger: CCACATGAAGAGCAAAGACAATCGGATCAAGCTGAT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTATCCACGGCCACGATGTaGGTTTCCATTTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALSTATM*VSISDD
Trigger: GTCATCTGAAATGGAAACCAACATCGTGGCCGTGGA...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWETFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCTGGAAGACCAGATGTaGGTAAGAGGACCATCCAGG +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLEDQM*VRGPSR
Trigger: CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGCTTCCGGATTCCACTTaGGGCTCTAACGAGACACCT +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKLPDST*GSNETP
Trigger: AGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAG...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTTGGTGAAGTCGGGGTaGCTGGTATTCCACGTGACA +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILLVKSG*LVFHVT
Trigger: TGTCACGTGGAATACCAGCAACCCCGACTTCACCAA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILRSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGGGGACCGGATGGCGGTGGCTGCTGCTTTGAATATGTTTTGGTTGTCTGGGTTGTGTCATTCACGAACTaGATGAGCAACTTTAAGATC +
Preference number: 5 (lower is better)
Translates to: RGPDGGGCCFEYVLVVWVVSFTN*MSNFKI
Trigger: GATCTTAAAGTTGCTCATCAAGTTCGTGAATGACAC...AACCCAGACAACCAAAACATATTCAAAGCAGCAGCCACCGCCATCCGGTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGTGTCATTCACGAACTaGATGAGCAACTTTAAGATC +
Preference number: 5 (lower is better)
Translates to: PEASQRLAVHRLRLERSEVSFTN*MSNFKI
Trigger: GATCTTAAAGTTGCTCATCAAGTTCGTGAATGACAC...CTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGGATTTTCTGGCTGAATaGGTGATCACCAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKDFLAE*VITRAF
Trigger: GAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATC...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCTTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGATCAGCTTGATCCGATaGTCTTTGCTCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSISLIR*SLLFMW
Trigger: CCACATGAAGAGCAAAGACAATCGGATCAAGCTGAT...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCAGGATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: FPAFECLEDQMLVRGPSRISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...CCTGGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAGCACTTTGATCCCATaGAGAATTTCGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGSTLIP*RISFIS
Trigger: GCTGATGAACGAAATTCTCAATGGGATCAAAGTGCT...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAGTTCTGCGGTGCTGTaGTGGTGCCTGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLSSAVL*WCLLMS
Trigger: GGACATCAGCAGGCACCACAACAGCACCGCAGAACT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GCCTTCCGGATTCCACTTTGGGCTCTAACGAGACACCTTAAAGAACAGGCTTTAACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 5 (lower is better)
Translates to: AFRIPLWALTRHLKEQALTFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...TAAAGCCTGTTCTTTAAGGTGTCTCGTTAGAGCCCAAAGTGGAATCCGGAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCGATCTTGGCGATGTaGATGCCATCGATGATGATC +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPILAM*MPSMMI
Trigger: GATCATCATCGATGGCATCAACATCGCCAAGATCGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp AGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SQKHLKDLQSTDFGWRDPFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...CGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACTTGCAGTCCACAGACTTCGGCTGGAGAGATCCGAGGCAGTAGGCTGAATTTGTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TCSPQTSAGEIRGSRLNLFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...CAAATTCAGCCTACTGCCTCGGATCTCTCCAGCCGAAGTCTGTGGACTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGCAGTAGGCTGAATTaGGTCACTAGGATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWGSRLN*VTRIFY
Trigger: ATAGAAGATCCTAGTGACCAAATTCAGCCTACTGCC...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGGTGTCATTCACGAACTaGATGAGCAACTTTAAGATC +
Preference number: 5 (lower is better)
Translates to: HRDQHGFKHRASFSLFPGVSFTN*MSNFKI
Trigger: GATCTTAAAGTTGCTCATCAAGTTCGTGAATGACAC...CCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCCAGGCACCAATGACGTaGAACAGGGAGCCCATGAAC +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLQAPMT*NREPMN
Trigger: GTTCATGGGCTCCCTGTTCAACGTCATTGGTGCCTG...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAACAGAACGATGCAGTaGCCCACACACTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTNRTMQ*PTHSSR
Trigger: GCGGCTGGAGTGTGTGGGCAACTGCATCGTTCTGTT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTGTCTCTGAATACTCCTaGAGCCTCTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTVSEYS*SLSTAT
Trigger: CGTGGCCGTGGAGAGGCTCAAGGAGTATTCAGAGAC...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAATGTTACTTCTCCCATTGATCGTGACATaGATGTGCCTGAGAACGAAG +
Preference number: 5 (lower is better)
Translates to: TVSNTGRASHYFLGMLLLPLIVT*MCLRTK
Trigger: CTTCGTTCTCAGGCACATCAATGTCACGATCAATGG...GAGAAGTAACATTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TGGTTCCCAGCTTTTGAGTGCCTGGAAGACCAGATGTTGGTAAGAGGACCATCCTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WFPAFECLEDQMLVRGPSFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...GGATGGTCCTCTTACCAACATCTGGTCTTCCAGGCACTCAAAAGCTGGGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAAGCATCTCAAAGACTaGCAGTCCACAGACTTCGGC +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILKHLKD*QSTDFG
Trigger: GCCGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAACTAGAGGCGACTTGTaGTCAAAAGGAAAGAACAGA +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWETRGDL*SKGKNR
Trigger: TCTGTTCTTTCCTTTTGACAACAAGTCGCCTCTAGT...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTAGCAAGAGTGATCTCTACAACTaGCCCTTTCTGGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: PKRKMLSGFEVGGVILSKSDLYN*PFLATA
Trigger: AGCTGTTGCCAGAAAGGGCAAGTTGTAGAGATCACT...CTTGCTAAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCTTGGTGAAGTCGGGGTaGCTGGTATTCCACGTGACA +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLLVKSG*LVFHVT
Trigger: TGTCACGTGGAATACCAGCAACCCCGACTTCACCAA...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLSDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCTCATTCGCATCCACCTaGGAACTCTCTTTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLSFAST*ELSFGW
Trigger: CCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATGA...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAGGTCGTGGATGGCCTaGAAGAAGAAGCTCATGAGG +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLRSWMA*KKKLMR
Trigger: CCTCATGAGCTTCTTCTTCAAGGCCATCCACGACCT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp CAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGAAGTGTCATTCACGAACTaGATGAGCAACTTTAAGATC +
Preference number: 5 (lower is better)
Translates to: QRPTRFQTQGELLTISWEVSFTN*MSNFKI
Trigger: GATCTTAAAGTTGCTCATCAAGTTCGTGAATGACAC...TTCCCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp ACACAGAGACCAACACGGTTTCAAACACAGGGCGAGCTTCTCACTATTTCCTGGGTGTCATTCACGAACTaGATGAGCAACTTTAAGATC +
Preference number: 5 (lower is better)
Translates to: TQRPTRFQTQGELLTISWVSFTN*MSNFKI
Trigger: GATCTTAAAGTTGCTCATCAAGTTCGTGAATGACAC...CCAGGAAATAGTGAGAAGCTCGCCCTGTGTTTGAAACCGTGTTGGTCTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTAGAGGTGATGGGAGCCAGAAGCATCTCAAAGACTTGCAGTCCACAGACTTCGGTGTCATTCACGAACTaGATGAGCAACTTTAAGATC +
Preference number: 5 (lower is better)
Translates to: LEVMGARSISKTCSPQTSVSFTN*MSNFKI
Trigger: GATCTTAAAGTTGCTCATCAAGTTCGTGAATGACAC...CGAAGTCTGTGGACTGCAAGTCTTTGAGATGCTTCTGGCTCCCATCACCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTCCAATGACAGCGGTCTaGATCCTCATGCCACTGACG +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTPMTAV*ILMPLT
Trigger: CGTCAGTGGCATGAGGATCAAGACCGCTGTCATTGG...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTTGGTGAAGTCGGGGTaGCTGGTATTCCACGTGACA +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTLVKSG*LVFHVT
Trigger: TGTCACGTGGAATACCAGCAACCCCGACTTCACCAA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTCCGACGTGTCCTCCTaGTTTAAGGACCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTSDVSS*FKDQRS
Trigger: TGACCTCTGGTCCTTAAACAAGGAGGACACGTCGGA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTCATTCGCATCCACCTaGGAACTCTCTTTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTSFAST*ELSFGW
Trigger: CCAGCCGAAAGAGAGTTCCAAGGTGGATGCGAATGA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTATCAGCTTGATCCGATaGTCTTTGCTCTTCATGTGG +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILISLIR*SLLFMW
Trigger: CCACATGAAGAGCAAAGACAATCGGATCAAGCTGAT...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTGGGCATCCAGGATGTaGTTCTCGTCAATGGTCACG +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTWASRM*FSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTACCAAGATCCGCGTCTaGTTCTTCAGCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTTKIRV*FFSIPL
Trigger: CAAGGGGATGCTGAAGAACAAGACGCGGATCTTGGT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTTTGATCCGATTGTCTTaGCTCTTCATGTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTLIRLS*LFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAA...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTACCTTTTCTCCCCCATaGATCGTGACATTGATGTGC +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTTFSPP*IVTLMC
Trigger: GCACATCAATGTCACGATCAATGGGGGAGAAAAGGT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TTTTCGCCTAAAAGAAAGATGCTCTCTGGGTTTGAAGTCGGCGGCGTAATTCTTTTTGGTTTTTATGTTTaGGTTTCAGTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: FSPKRKMLSGFEVGGVILFGFYV*VSVWEA
Trigger: AGCCTCCCACACTGAAACCAAAACATAAAAACCAAA...AAGAATTACGCCGCCGACTTCAAACCCAGAGAGCATCTTTCTTTTAGGCGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp TCATTGATATTCAAAGATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SLIFKDGFFSCPGRASVTKAVII*DLRMAR
Trigger: CCTAGCCATCCTGAGATCCAAAATTATGACAGCCTT...AGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATCTTTGAATATCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS-3UTR CAA 90 bp GATGGGTTCTTTTCGTGTCCTGGAAGAGCATCAGTAACTAAATATCAAGTTCTCATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: DGFFSCPGRASVTKYQVLISFIS*IRLSLL
Trigger: GAGCAAAGACAATCGGATCAAGCTGATGAACGAAAT...GAGAACTTGATATTTAGTTACTGATGCTCTTCCAGGACACGAAAAGAACCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS TCA 90 bp GATGACAATATTTGTTCAGCACCTGCTATGCACTGTTTTATATACTaGGGATACAGCAGTCAAGAGAAACGACAAAAATGCCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: DDNICSAPAMHCFIY*GYSSQEKRQKCPSG
Trigger: TCCAGATGGGCATTTTTGTCGTTTCTCTTGACTGCTGTATCCTCAGTATATAAAACAGTGCATAGCAGGTGCTGAACAAATATTGTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679043.1
CDS TCA 72 bp GGACCCTCCCAGGCTGGGATGGGGGCTCCTTCTCTGTaGTTTCCCAGGCCCTCAAGCAGCCCTCCATCACTG +
Preference number: 6 (lower is better)
Translates to: GPSQAGMGAPSL*FPRPSSSPPSL
Trigger: CAGTGATGGAGGGCTGCTTGAGGGCCTGGGAAATCACAGAGAAGGAGCCCCCATCCCAGCCTGGGAGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576557.1
ENST00000633802.1
CDS TCA 72 bp TGCAGTCCTCGAACTGTGTCCGGATGGTGGACTGGATaGGGTCGTCCGTTTCCAGGTCCACGGCTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: CSPRTVSGWWTG*GRPFPGPRLPW
Trigger: CCACGGCAGCCGTGGACCTGGAAACGGACGACCTCATCCAGTCCACCATCCGGACACAGTTCGAGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000676806.1
ENST00000677164.1
CDS TCA 72 bp TGCACAGGGCCACCAGAAAGGGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACAGGTAGGCAGACTTCT +
Preference number: 6 (lower is better)
Translates to: CTGPPERACRPR*RCPRLTGRQTS
Trigger: AGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGCCCTTTCTGGTGGCCCTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
CDS CCA 72 bp ACGGTGCAGTCCTCGAACTGTGTCCGGATGGTGGACTaGATGAGGTCGTCCGTTTCCAGGTCCACGGCTGCC +
Preference number: 6 (lower is better)
Translates to: TVQSSNCVRMVD*MRSSVSRSTAA
Trigger: GGCAGCCGTGGACCTGGAAACGGACGACCTCATCCAGTCCACCATCCGGACACAGTTCGAGGACTGCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000676806.1
ENST00000677164.1
CDS TCA 72 bp TGCACAAGGCCACCAGAAAGGGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACAGGTAGGCAGACTTCT +
Preference number: 6 (lower is better)
Translates to: CTRPPERACRPR*RCPRLTGRQTS
Trigger: AGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGCCCTTTCTGGTGGCCTTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000677164.1
ENST00000678422.1
CDS GCA 72 bp TGGAGAAGCAAAGCACAAGGGTGTCAACCGTACAGATaGCTTGGGCAGGGTCGGAGGGCTCCCTGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: WRSKAQGCQPYR*LGQGRRAPCWD
Trigger: GTCCCAGCAGGGAGCCCTCCGACCCTGCCCAAGGCATCTGTACGGTTGACACCCTTGTGCTTTGCTTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574761.1
ENST00000632338.1
CDS TCA 72 bp AAAGGGCGTGCAGACCCAGGTGAAGGTGCCCACGGCTaGCAGGTAGGCAGACTTCTTCAGCACCTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: KGRADPGEGAHG*QVGRLLQHLQL
Trigger: GAGCTGAAGGTGCTGAAGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000632908.1
ENST00000677164.1
ENST00000678422.1
ENST00000679043.1
CDS TCA 72 bp TGGCTTCACTCACCAGAAAGGGCGTGCAGACCCAGGTaGAGGTGCCCACGGCTGACAGGTAGGCAGACTTCT +
Preference number: 6 (lower is better)
Translates to: WLHSPERACRPR*RCPRLTGRQTS
Trigger: AGAAGTCTGCCTACCTGTCAGCCGTGGGCACCTTCACCTGGGTCTGCACGCCCTTTCTGGTGAGTGAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574224.2
ENST00000632908.1
CDS CCA 72 bp CAGCATGCCATTCTCCATTTGCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGACCCCGTTCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: QHAILHLLCFLP*TADARDPVLLC
Trigger: GCAGAGGAGAACGGGGTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAGCAAATGGAGAATGGCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399410.8
ENST00000572882.3
ENST00000575422.5
ENST00000621144.4
ENST00000634072.1
ENST00000677164.1
ENST00000678422.1
CDS CCA 72 bp CAGCATGCCATTCTCCATTTGCTTTGCTTCCTTCCCTaGACCGCTGACGCCCGTGACCCCTGCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QHAILHLLCFLP*TADARDPCFLL
Trigger: GAGGAGGAAGCAGGGGTCACGGGCGTCAGCGGTCCAGGGAAGGAAGCAAAGCAAATGGAGAATGGCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399408.7
ENST00000576557.1
ENST00000621659.2
ENST00000622828.3
ENST00000633802.1
CDS CCA 72 bp AAGCAAAGCACAAGGGTGTCAACCGTACAGATGCCTTaGGCAGGGTCGGAGGGCTCCCTGCTGGGACTGCTA +
Preference number: 6 (lower is better)
Translates to: KQSTRVSTVQMP*AGSEGSLLGLL
Trigger: TAGCAGTCCCAGCAGGGAGCCCTCCGACCCTGCCCAAGGCATCTGTACGGTTGACACCCTTGTGCTTTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574761.1
ENST00000632338.1
CDS CAA 90 bp CCGACACTGAGGTTCTCCCCGCCTTCTGCACATTCATGGTCTAGCTaGTCAGGAAGGGCTGACACGAAGTCCTTCAGGTGGGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: PTLRFSPPSAHSWSS*SGRADTKSFRWASS
Trigger: GGAGCTGGCCCACCTGAAGGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGGCGGGGAGAACCTCAGTGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000676806.1
ENST00000677164.1
CDS CCA 72 bp CTCTGCTGCAGGAGGTCCGATGGGGCGCCGTACTCCTaGATTTCTCCTTTGTCCAAGACGATCACCCTTGTG +
Preference number: 6 (lower is better)
Translates to: LCCRRSDGAPYS*ISPLSKTITLV
Trigger: CACAAGGGTGATCGTCTTGGACAAAGGAGAAATCCAGGAGTACGGCGCCCCATCGGACCTCCTGCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000676806.1
ENST00000677164.1
CDS CCA 72 bp GAAGGTGATCCTCGACAGGAAGGAAGCGCTGGACTCTaGGCAGGGATTAGGGTCGTGGATGGTTTCCGAGAA +
Preference number: 6 (lower is better)
Translates to: EGDPRQEGSAGL*AGIRVVDGFRE
Trigger: TTCTCGGAAACCATCCACGACCCTAATCCCTGCCCAGAGTCCAGCGCTTCCTTCCTGTCGAGGATCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000632908.1
ENST00000678422.1
ENST00000679043.1
CDS CCA 72 bp CCGACACTGAGGTTCTCCCCGCCTTCTGCACATTCATaGTCTAGCTTGTCAGGAAGGGCTGACACGAAGTCC +
Preference number: 6 (lower is better)
Translates to: PTLRFSPPSAHS*SSLSGRADTKS
Trigger: GGACTTCGTGTCAGCCCTTCCTGACAAGCTAGACCATGAATGTGCAGAAGGCGGGGAGAACCTCAGTGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000676806.1
ENST00000677164.1
CDS CCA 72 bp AGGAGAAGAAAAGGTGACTTAGCCCAGATATCACCCTaGACCCTCCCAGGCTGGGATGGGGGCTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RRRKGDLAQISP*TLPGWDGGSFS
Trigger: AGAGAAGGAGCCCCCATCCCAGCCTGGGAGGGTCCAGGGTGATATCTGGGCTAAGTCACCTTTTCTTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576557.1
ENST00000633802.1
CDS CAA 72 bp TCCAGCTCCTCATGGGAGAGAAAGATCCTCAGGCGTTaGAGGGAGACACTCGCCTGCACGATGCTGCTGATG +
Preference number: 6 (lower is better)
Translates to: SSSSWERKILRR*RETLACTMLLM
Trigger: CATCAGCAGCATCGTGCAGGCGAGTGTCTCCCTCAAACGCCTGAGGATCTTTCTCTCCCATGAGGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS TCA 72 bp GTGATCTTGGCCCACTCCAACCGTCGCCTCCCAGGTTaGAGTAATTCTCTTGCCTCAGCCTCCCTAGTAGCT +
Preference number: 6 (lower is better)
Translates to: VILAHSNRRLPG*SNSLASASLVA
Trigger: AGCTACTAGGGAGGCTGAGGCAAGAGAATTACTTCAACCTGGGAGGCGACGGTTGGAGTGGGCCAAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574224.2
CDS TCA 72 bp GTTGACAATCTCCCCGACCGTGGAGGATTTTCTGGCTaGATTGGTGATCACCAGGGCCTTCCGATAGACAGC +
Preference number: 6 (lower is better)
Translates to: VDNLPDRGGFSG*IGDHQGLPIDS
Trigger: GCTGTCTATCGGAAGGCCCTGGTGATCACCAATTCAGCCAGAAAATCCTCCACGGTCGGGGAGATTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000632908.1
ENST00000677164.1
ENST00000678422.1
ENST00000679043.1
CDS GCA 72 bp GTGGAAGTGGCCCTCAAATCTCTGCAGTTGCTTCCCTaGACTGTCCGTCACCAGCATGCCATTCTCCATTTG +
Preference number: 6 (lower is better)
Translates to: VEVALKSLQLLP*TVRHQHAILHL
Trigger: CAAATGGAGAATGGCATGCTGGTGACGGACAGTGCAGGGAAGCAACTGCAGAGATTTGAGGGCCACTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678422.1
CDS CAA 72 bp CAAGCGTGCCGTTCGACTCAGCTCGCACTTTTTGTCTaGCAAGGCTATCTTAATGCAGGAAGCAGGGGGCAC +
Preference number: 6 (lower is better)
Translates to: QACRSTQLALFV*QGYLNAGSRGH
Trigger: GTGCCCCCTGCTTCCTGCATTAAGATAGCCTTGCAAGACAAAAAGTGCGAGCTGAGTCGAACGGCACGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574224.2
CDS GCA 72 bp AAGCGTGCCGTTCGACTCAGCTCGCACTTTTTGTCTTaGAAGGCTATCTTAATGCAGGAAGCAGGGGGCACT +
Preference number: 6 (lower is better)
Translates to: KRAVRLSSHFLS*KAILMQEAGGT
Trigger: AGTGCCCCCTGCTTCCTGCATTAAGATAGCCTTGCAAGACAAAAAGTGCGAGCTGAGTCGAACGGCACGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574224.2
CDS CCA 72 bp AAACAGCAGCACGGTGTAGAAGTAGCCCTGCCAGTCTaGGGCCTTCGTGTCATTCACGAACTTGATGAGCAA +
Preference number: 6 (lower is better)
Translates to: KQQHGVEVALPV*GLRVIHELDEQ
Trigger: TTGCTCATCAAGTTCGTGAATGACACGAAGGCCCCAGACTGGCAGGGCTACTTCTACACCGTGCTGCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000632908.1
ENST00000677164.1
ENST00000678422.1
ENST00000679043.1
CDS CCA 72 bp GCTCCCTGCTGGGACTGCTATTGTGGGTCTGAACCATaGCATAAGAGACGGAGTGTTTCCACATGCACACAT +
Preference number: 6 (lower is better)
Translates to: APCWDCYCGSEP*HKRRSVSTCTH
Trigger: ATGTGTGCATGTGGAAACACTCCGTCTCTTATGCCATGGTTCAGACCCACAATAGCAGTCCCAGCAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574761.1
ENST00000632338.1
CDS CAA 72 bp TTAAACAGAGAGGGGTTCCACTCCTTCTGTGGGGACTaGACGATCAAAGCCTCCACCTCCTCATTCGCATCC +
Preference number: 6 (lower is better)
Translates to: LNREGFHSFCGD*TIKASTSSFAS
Trigger: GGATGCGAATGAGGAGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGAGTGGAACCCCTCTCTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000632908.1
ENST00000677164.1
ENST00000678422.1
ENST00000679043.1
CDS CAA 72 bp GCGACTCCACATGCACAGAACACTCTCTTTCTCTGCTaGAATGGTTCAACCCCAGACGCTTGGCACGAATGG +
Preference number: 6 (lower is better)
Translates to: ATPHAQNTLFLC*NGSTPDAWHEW
Trigger: CCATTCGTGCCAAGCGTCTGGGGTTGAACCATTCAAGCAGAGAAAGAGAGTGTTCTGTGCATGTGGAGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575422.5
ENST00000634072.1
CDS CCA 72 bp AGGATGTTGAACAAGGCCAAAGACACGAAGGCTGTCTaGGCATCCAGGATGTTGTTCTCGTCAATGGTCACG +
Preference number: 6 (lower is better)
Translates to: RMLNKAKDTKAV*ASRMLFSSMVT
Trigger: CGTGACCATTGACGAGAACAACATCCTGGATGCCCAGACAGCCTTCGTGTCTTTGGCCTTGTTCAACATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000677164.1
ENST00000678422.1
CDS CCA 72 bp TCCACATGCACAGAACACTCTCTTTCTCTGCTTGAATaGTTCAACCCCAGACGCTTGGCACGAATGGCGCTA +
Preference number: 6 (lower is better)
Translates to: STCTEHSLSLLE*FNPRRLARMAL
Trigger: TAGCGCCATTCGTGCCAAGCGTCTGGGGTTGAACCATTCAAGCAGAGAAAGAGAGTGTTCTGTGCATGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575422.5
ENST00000634072.1
CDS CAA 72 bp TCTGGGCAGGGATTCTCTTTTAAGGCTGTCATAATTTaGGATCTCAGGATGGCTAGGGCACACACTAGGGCT +
Preference number: 6 (lower is better)
Translates to: SGQGFSFKAVII*DLRMARAHTRA
Trigger: AGCCCTAGTGTGTGCCCTAGCCATCCTGAGATCCAAAATTATGACAGCCTTAAAAGAGAATCCCTGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677164.1
CDS CCA 72 bp TTGCAAGGCTATCTTAATGCAGGAAGCAGGGGGCACTaGTTTACATTCTGGCACAAGCTCCTTATATCACAG +
Preference number: 6 (lower is better)
Translates to: LQGYLNAGSRGH*FTFWHKLLISQ
Trigger: CTGTGATATAAGGAGCTTGTGCCAGAATGTAAACCAGTGCCCCCTGCTTCCTGCATTAAGATAGCCTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574224.2
CDS CAA 72 bp AGCACTTTGATCCCATTGAGAATTTCGTTCATCAGCTaGATCCGATTGTCTTTGCTCTTCATGTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: STLIPLRISFIS*IRLSLLFMWAT
Trigger: GGTGGCCCACATGAAGAGCAAAGACAATCGGATCAAGCTGATGAACGAAATTCTCAATGGGATCAAAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000399408.7
ENST00000399410.8
ENST00000572882.3
ENST00000574224.2
ENST00000621144.4
ENST00000621659.2
ENST00000622828.3
ENST00000632908.1
ENST00000677164.1
ENST00000678422.1
ENST00000679043.1
CDS CAA 72 bp CCTCGTCCATCACTGTGCTGCCTTCAGTCTTCAGGCTaGTTTTTACGCAGGAGAGGAAAAGAAATAAAGTAT +
Preference number: 6 (lower is better)
Translates to: PRPSLCCLQSSG*FLRRRGKEIKY
Trigger: ATACTTTATTTCTTTTCCTCTCCTGCGTAAAAACAAGCCTGAAGACTGAAGGCAGCACAGTGATGGACGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576557.1
ENST00000633802.1
CDS TCA 72 bp ATTTGTTCAGCACCTGCTATGCACTGTTTTATATACTaGGGATACAGCAGTCAAGAGAAACGACAAAAATGC +
Preference number: 6 (lower is better)
Translates to: ICSAPAMHCFIY*GYSSQEKRQKC
Trigger: GCATTTTTGTCGTTTCTCTTGACTGCTGTATCCTCAGTATATAAAACAGTGCATAGCAGGTGCTGAACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679043.1
CDS GCA 72 bp TTACAATGGATGACAATATTTGTTCAGCACCTGCTATaGACTGTTTTATATACTGAGGATACAGCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: LQWMTIFVQHLL*TVLYTEDTAVK
Trigger: CTTGACTGCTGTATCCTCAGTATATAAAACAGTGCATAGCAGGTGCTGAACAAATATTGTCATCCATTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679043.1