RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCB9 (Homo sapiens)

Ensembl gene IDs: ENSG00000150967

Ensembl transcript IDs: ENST00000280560.13, ENST00000344275.11, ENST00000346530.9, ENST00000392439.7, ENST00000426173.6, ENST00000442028.6, ENST00000442833.6, ENST00000536976.5, ENST00000537276.5, ENST00000538895.5, ENST00000540285.5, ENST00000540971.5, ENST00000541424.1, ENST00000541983.1, ENST00000542448.5, ENST00000542678.5, ENST00000543935.1, ENST00000545373.1, ENST00000546077.1, ENST00000546289.5, ENST00000622723.1

Found 1492 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCATCTGCTGGGCGATGGGGGCTCTGGCCACCTGGAGCCGCTCCTaGCCCCGCATTGCCCACCACCCTGTGACTCACCAGATACTCGCT +
Preference number: 1 (lower is better)
Translates to: SICWAMGALATWSRS*PRIAHHPVTHQILA
Trigger: AGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAGCGGCTCCAGGTGGCCAGAGCCCCCATCGCCCAGCAGATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CCA 90 bp GATGCCCTCCACGCTCCCTACCCGCCCTGGCCAGACTCACAGAGCTaGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: DALHAPYPPWPDSQS*QEGETENPVPRVSL
Trigger: GAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGCGTGGAGGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATaGCCTCCACGCTCCCTACCCGCCCTGGCCAGACTCACAGAGCTG +
Preference number: 1 (lower is better)
Translates to: HSETGLDWQRAMADR*PPRSLPALARLTEL
Trigger: CAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGCGTGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CCA 90 bp GAATGGGGCAGGGACCAGGGGCAAGATGCAGGAAGCGGTGATCCATaGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGG +
Preference number: 1 (lower is better)
Translates to: EWGRDQGQDAGSGDP*DMAGRLSVLQAWAR
Trigger: CCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTGCATCTTGCCCCTGGTCCCTGCCCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CCA 90 bp CCAGGAATTCACCAGCCCAGGAGGCTGATAGTCTGGGAGAGCTCCTaGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGGGC +
Preference number: 1 (lower is better)
Translates to: PGIHQPRRLIVWESS*GPSLLSIHLLGDGG
Trigger: GCCCCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTATCAGCCTCCTGGGCTGGTGAATTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 90 bp CCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCACGGGCTCCTGGCTCACCAGGGAGA +
Preference number: 1 (lower is better)
Translates to: PSRKAQWAGRRRCYP*WSGRTARAPGSPGR
Trigger: TCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGCCCGCTCCATCACGGATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 90 bp GGCCAGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTaGGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCC +
Preference number: 1 (lower is better)
Translates to: GQPLTPPVEVSCGSQ*DWLRLAAGDGRQMP
Trigger: GGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR TCA 90 bp CCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCT +
Preference number: 1 (lower is better)
Translates to: PPPPHWRSSGQSSWH*WSPPPCCSLWPGHS
Trigger: AGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR GCA 90 bp CAGCAGTGTGAGCCCGCTGCCCCAGACGTAGTACATGTAGGCAGCTaGCTCCTTCCTGTTCAGCTTGTACACCTGCTGCAGCTTCCGCAG +
Preference number: 1 (lower is better)
Translates to: QQCEPAAPDVVHVGS*LLPVQLVHLLQLPQ
Trigger: CTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 90 bp CTCGTAGATGATGAAGGCGATGAGGTTGCCGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCCGTAGTAGAGGATGCTGACCTGGAC +
Preference number: 1 (lower is better)
Translates to: LVDDEGDEVAAGHLA*DDKVAPVVEDADLD
Trigger: GTCCAGGTCAGCATCCTCTACTACGGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 90 bp TTTGCCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATaGACATCCACGTGGCCTCCAGACAGCAGAGCACAGGGGCGGGTG +
Preference number: 1 (lower is better)
Translates to: FATIPSTKDRRECIS*TSTWPPDSRAQGRV
Trigger: CACCCGCCCCTGTGCTCTGCTGTCTGGAGGCCACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR GCA 90 bp CAGAGTAAACTAAGTCCTGGCGCCAGGACTAAGCCAGCCCTGGGGTaGCGTGCTCCTCTTCATTCTCTCTCATCCCTGCTTGTTTTCCTC +
Preference number: 1 (lower is better)
Translates to: QSKLSPGARTKPALG*RAPLHSLSSLLVFL
Trigger: GAGGAAAACAAGCAGGGATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGCCAGGACTTAGTTTACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
3UTR GCA 90 bp ACCATCATGATGATGGGGAAGCCCATGAAGGTGACCAAGGAGAGCTaGCATGAGAGGCTGAACATGAAGACCACCACGCCCGTGACCTTG +
Preference number: 1 (lower is better)
Translates to: TIMMMGKPMKVTKES*HERLNMKTTTPVTL
Trigger: CAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCACCTTCATGGGCTTCCCCATCATCATGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
3UTR CCA 90 bp ACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTaGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAATGCA +
Preference number: 1 (lower is better)
Translates to: TGFSQHVATSGKARS*ALPPSHPPKTEENA
Trigger: TGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR GCA 90 bp TCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTaGCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATG +
Preference number: 1 (lower is better)
Translates to: SLNMLQPLAKPDPGL*HHPIHQRQKRMHLM
Trigger: CATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CCA 90 bp GTAGTACACTTTATTGACCGGGTTCTCTCAACATGTTGCAACCTCTaGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAA +
Preference number: 1 (lower is better)
Translates to: VVHFIDRVLSTCCNL*QSQILGFATIPSTK
Trigger: TTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAATAAAGTGTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR TCA 90 bp AATACAGCAGTGATGAAGACAAACTCTAATGTGGGAAAGAAACAATaGCAGAGTAAACTAAGTCCTGGCGCCAGGACTAAGCCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: NTAVMKTNSNVGKKQ*QSKLSPGARTKPAL
Trigger: CAGGGCTGGCTTAGTCCTGGCGCCAGGACTTAGTTTACTCTGTCATTGTTTCTTTCCCACATTAGAGTTTGTCTTCATCACTGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
3UTR TCA 90 bp GAAGGGCCATTCACTCCTGGCTCAGAAGTTTCTAGAACATCTTGGTaGAAGTGCCCGCCATTACTCCCAATTAGAAAAAGGTTTTTGAAA +
Preference number: 1 (lower is better)
Translates to: EGPFTPGSEVSRTSW*KCPPLLPIRKRFLK
Trigger: TTTCAAAAACCTTTTTCTAATTGGGAGTAATGGCGGGCACTTTCACCAAGATGTTCTAGAAACTTCTGAGCCAGGAGTGAATGGCCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGCTCGGAGGGCAGCTaGGGGCCTCCGTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGSEGS*GPPWAH
Trigger: ATGTGCCCACGGAGGCCCCCAGCTGCCCTCCGAGCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGGCACCGGGTCCTCTaGCCCACCGGGAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGRHRVL*PTGRSR
Trigger: CCTGCTTCTCCCGGTGGGGCAGAGGACCCGGTGCCT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGGCTCGGAGGGCAGCTaGGGGCCTCCGTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGGSEGS*GPPWAH
Trigger: ATGTGCCCACGGAGGCCCCCAGCTGCCCTCCGAGCC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGCTCGGAGGGCAGCTaGGGGCCTCCGTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: WQEGETENPVPRVSLRDRGSEGS*GPPWAH
Trigger: ATGTGCCCACGGAGGCCCCCAGCTGCCCTCCGAGCC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAGGCACCGGGTCCTCTaGCCCACCGGGAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGRHRVL*PTGRSR
Trigger: CCTGCTTCTCCCGGTGGGGCAGAGGACCCGGTGCCT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCTCCGTGGGCACATCTaGCAGGCAGGCACCGGGTCC +
Preference number: 2 (lower is better)
Translates to: WQEGETENPVPRVSLRDRLRGHI*QAGTGS
Trigger: GGACCCGGTGCCTGCCTGGCAGATGTGCCCACGGAG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 2 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGAGTGCCCTGGGAATaGGGCAGGGACCAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGVPWE*GRDQGQ
Trigger: TTGCCCCTGGTCCCTGCCCCATTCCCAGGGCACTCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGATGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 2 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCAGGCACCGGGTCCTCTaGCCCACCGGGAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSRHRVL*PTGRSR
Trigger: CCTGCTTCTCCCGGTGGGGCAGAGGACCCGGTGCCT...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGGCTCGGAGGGCAGCTaGGGGCCTCCGTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: HSETGLDWQRAMADRCPPGSEGS*GPPWAH
Trigger: ATGTGCCCACGGAGGCCCCCAGCTGCCCTCCGAGCC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGAGTGCCCTGGGAATaGGGCAGGGACCAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: WQEGETENPVPRVSLRDRGVPWE*GRDQGQ
Trigger: TTGCCCCTGGTCCCTGCCCCATTCCCAGGGCACTCC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: VATSGKARSWALPPSHPPEGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGTCAGCATCCATCTGCTaGGCGATGGGGGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGSASIC*AMGALA
Trigger: GGCCAGAGCCCCCATCGCCCAGCAGATGGATGCTGA...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCTCCGTGGGCACATCTaGCAGGCAGGCACCGGGTCC +
Preference number: 2 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPLRGHI*QAGTGS
Trigger: GGACCCGGTGCCTGCCTGGCAGATGTGCCCACGGAG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTCGTCTTTCAGTGCTaGAGGCCTGGGCTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: WQEGETENPVPRVSLRDRVVFQC*RPGLGG
Trigger: CCCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGAC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGTCGTCTTTCAGTGCTaGAGGCCTGGGCTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGVVFQC*RPGLGG
Trigger: CCCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGAC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 2 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGGCTCGGAGGGCAGCTaGGGGCCTCCGTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: ATSGKARSWALPPSHPPKGSEGS*GPPWAH
Trigger: ATGTGCCCACGGAGGCCCCCAGCTGCCCTCCGAGCC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPEGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: GLHHHLERHSGQAVGDVIATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGATCCAGGATGAGGACTaGGGGGTTCCGCACCAGAGC +
Preference number: 2 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGIQDED*GVPHQS
Trigger: GCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGAT...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CAA 90 bp GCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTaGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCA +
Preference number: 2 (lower is better)
Translates to: AALPLLRRLGRSVKA*AQGSRGKECPGNGA
Trigger: TGCCCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR TCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR TCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGTGCCGGGGGACAGGCTaGAGGAGACATTCTCCATAC +
Preference number: 2 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGCRGTG*RRHSPY
Trigger: GTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCA...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 2 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: VATSGKARSWALPPSHPPSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCATCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: VATSGKARSWALPPSHPPSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ATSGKARSWALPPSHPPKSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGEGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGCTGCCAGCCAGGGGTaGGTGGACGAGGGGCGAAAG +
Preference number: 2 (lower is better)
Translates to: ATSGKARSWALPPSHPPKAASQG*VDEGRK
Trigger: CTTTCGCCCCTCGTCCACCCACCCCTGGCTGGCAGC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GGGCATTGGCCTTCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCACCGTGTTGCTCGCTCTaGCCAGGGCATTCTGGACCT +
Preference number: 2 (lower is better)
Translates to: GHWPSVRPPPPSRKAQWAPCCSL*PGHSGP
Trigger: AGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGG...TGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCAGGAGGCTGATAGTCTaGGAGAGCTCCTGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGRRLIV*ESSWGP
Trigger: CGGGCCCCAGGAGCTCTCCCAGACTATCAGCCTCCT...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 2 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCATCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGAAGCGGTGATCCATaGGACATGGCAGGTCGTCTT +
Preference number: 2 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGSGDP*DMAGRL
Trigger: AAGACGACCTGCCATGTCCCATGGATCACCGCTTCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGCTGCCAGCCAGGGGTaGGTGGACGAGGGGCGAAAG +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPAASQG*VDEGRK
Trigger: CTTTCGCCCCTCGTCCACCCACCCCTGGCTGGCAGC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCCGTGTTGCTCGCTCTaGCCAGGGCATTCTGGACCT +
Preference number: 2 (lower is better)
Translates to: LHGTDGLLRRVARSGQGIPCCSL*PGHSGP
Trigger: AGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGG...AATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGATTGCCGCTGGTCATCTaGCCTGAGATGACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGLPLVI*PEMTRW
Trigger: CCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAA...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp CTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACA +
Preference number: 2 (lower is better)
Translates to: LCGLHHHLERHSGQAVGDNSTGS*LTREIT
Trigger: TGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT...ATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CAA 90 bp AAGCTCCGGACAGTCTTCATGGCACTGATGGTCTCCTCCGCCGTGTaGCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: KLRTVFMALMVSSAV*LALARAFWTSLESL
Trigger: GAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CAA 90 bp ACCTGCTGCAGCTTCCGCAGGTACACCTCTGCCTCCTCCTCCTCATaGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TCCSFRRYTSASSSS*AKLRTVFMALMVSS
Trigger: GGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR TCA 90 bp CTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 2 (lower is better)
Translates to: LHGTDGLLRRVARSGQGIQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...AATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR TCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCTGCCGGGGGACAGGCTaGAGGAGACATTCTCCATAC +
Preference number: 2 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGCRGTG*RRHSPY
Trigger: GTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCA...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAAGGCACCGGGTCCTCTaGCCCACCGGGAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRRHRVL*PTGRSR
Trigger: CCTGCTTCTCCCGGTGGGGCAGAGGACCCGGTGCCT...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCAGGCACCGGGTCCTCTaGCCCACCGGGAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGRHRVL*PTGRSR
Trigger: CCTGCTTCTCCCGGTGGGGCAGAGGACCCGGTGCCT...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGACTCCGTGGGCACATCTaGCAGGCAGGCACCGGGTCC +
Preference number: 2 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRLRGHI*QAGTGS
Trigger: GGACCCGGTGCCTGCCTGGCAGATGTGCCCACGGAG...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGCTCCGTGGGCACATCTaGCAGGCAGGCACCGGGTCC +
Preference number: 2 (lower is better)
Translates to: KKAALPLLRRLGRSVKALLRGHI*QAGTGS
Trigger: GGACCCGGTGCCTGCCTGGCAGATGTGCCCACGGAG...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGATCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGTCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: KKAALPLLRRLGRSVKALSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGAGAGGCCTAGTCTCTaGACATCCCCCAGGCTACTA +
Preference number: 2 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGERPSL*TSPRLL
Trigger: TAGTAGCCTGGGGGATGTCCAGAGACTAGGCCTCTC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGCTCCCTACCCGCCCTaGCCAGACTCACAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLAPYPP*PDSQSW
Trigger: CCAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCCCAGCCAGGGGTGGGTaGACGAGGGGCGAAAGCGCT +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGPARGG*TRGESA
Trigger: AGCGCTTTCGCCCCTCGTCCACCCACCCCTGGCTGG...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCCCAGCCAGGGGTGGGTaGACGAGGGGCGAAAGCGCT +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATPARGG*TRGESA
Trigger: AGCGCTTTCGCCCCTCGTCCACCCACCCCTGGCTGG...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGCTGCCAGCCAGGGGTaGGTGGACGAGGGGCGAAAG +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGAASQG*VDEGRK
Trigger: CTTTCGCCCCTCGTCCACCCACCCCTGGCTGGCAGC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GCGAACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGCCTCCTCCTCCTCATTaGCGAAGCTCCGGACAGTCT +
Preference number: 2 (lower is better)
Translates to: ANSTGSWLTREITRCKYLPPPPH*RSSGQS
Trigger: AGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGG...CAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp CTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATTTGCCGCTGGTCATCTaGCCTGAGATGACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: LCGLHHHLERHSGQAVGDLPLVI*PEMTRW
Trigger: CCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAA...ATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR TCA 90 bp AACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGTCATCTGGCCTGAGATaGCAAGGTGGCCCCCGTAGT +
Preference number: 2 (lower is better)
Translates to: NSTGSWLTREITRCKYLWSSGLR*QGGPRS
Trigger: ACTACGGGGGCCACCTTGTCATCTCAGGCCAGATGA...CCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR TCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCA +
Preference number: 2 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGRRCYP*WSGRTA
Trigger: TGCTGTTCGCCCGCTCCATCACGGATAACATCTCCT...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGTCGTCTTTCAGTGCTaGAGGCCTGGGCTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPVVFQC*RPGLGG
Trigger: CCCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGAC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCTCTCTGGCCAACTGTaGTGTTCCCAAAGCCCTCGA +
Preference number: 2 (lower is better)
Translates to: APGLSQPWGAVLLFILSHLSGQL*CSQSPR
Trigger: TCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
3UTR-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTGATCCATGGGACATaGCAGGTCGTCTTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: WQEGETENPVPRVSLRDRVIHGT*QVVFQC
Trigger: GCACTGAAAGACGACCTGCCATGTCCCATGGATCAC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGTGATCCATGGGACATaGCAGGTCGTCTTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGVIHGT*QVVFQC
Trigger: GCACTGAAAGACGACCTGCCATGTCCCATGGATCAC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGAAGCGGTGATCCATaGGACATGGCAGGTCGTCTT +
Preference number: 2 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSGSGDP*DMAGRL
Trigger: AAGACGACCTGCCATGTCCCATGGATCACCGCTTCC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGGAGTGCCCTGGGAATaGGGCAGGGACCAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGGVPWE*GRDQGQ
Trigger: TTGCCCCTGGTCCCTGCCCCATTCCCAGGGCACTCC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGGAGTGCCCTGGGAATaGGGCAGGGACCAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATGVPWE*GRDQGQ
Trigger: TTGCCCCTGGTCCCTGCCCCATTCCCAGGGCACTCC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAATTGGCAGCGGGCGATaGCAGACAGATGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: VATSGKARSWALPPSHPPIGSGR*QTDALH
Trigger: GTGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAAT...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: PPSHPPKTEENASHEHPREGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp AACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACA +
Preference number: 2 (lower is better)
Translates to: NSTGSWLTREITRCKYLWNSTGS*LTREIT
Trigger: TGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT...CCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCTCTCGAAAGGCACAGTaGGCAGGCCGTAGGAGATGT +
Preference number: 2 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGSRKAQ*AGRRRC
Trigger: ACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGA...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CAA 90 bp AAGACCACCACGCCCGTGACCTTGACTGTGTTCCGCAGGAAGACATaGATGTTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAG +
Preference number: 2 (lower is better)
Translates to: KTTTPVTLTVFRRKT*MFWETRSLTMVVSE
Trigger: CTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTTCCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
3UTR-3UTR TCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTTGAAATCTAGGAGTTaGCTGGGGTGCCTCAAACCA +
Preference number: 2 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGLKSRS*LGCLKP
Trigger: TGGTTTGAGGCACCCCAGTCAACTCCTAGATTTCAA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGTCGTCTTTCAGTGCTaGAGGCCTGGGCTCGGAGGG +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATVVFQC*RPGLGG
Trigger: CCCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGAC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACAGGTCGTCTTTCAGTaGTGCAGGCCTGGGCTCGGA +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPQVVFQ*CRPGLG
Trigger: TCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTG...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTACAGGTCGTCTTTCAGTaGTGCAGGCCTGGGCTCGGA +
Preference number: 2 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLQVVFQ*CRPGLG
Trigger: TCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTG...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCCGTCACCTTGCCGGGGGACAGGCTGAAGGAGACATTCTCCATACAATCTCCCAGCTTGTACACCTGCTaGAGCTTCCGCAGGTACACC +
Preference number: 2 (lower is better)
Translates to: AVTLPGDRLKETFSIQSPSLYTC*SFRRYT
Trigger: GGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCT...GGGAGATTGTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGAGAGGCCTAGTCTCTaGACATCCCCCAGGCTACTA +
Preference number: 2 (lower is better)
Translates to: HSETGLDWQRAMADRCPPERPSL*TSPRLL
Trigger: TAGTAGCCTGGGGGATGTCCAGAGACTAGGCCTCTC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACCAGACTCACAGAGCTaGCAAGAGGGAGAGACGGAA +
Preference number: 2 (lower is better)
Translates to: HSETGLDWQRAMADRCPPPDSQS*QEGETE
Trigger: TTCCGTCTCTCCCTCTTGCCAGCTCTGTGAGTCTGG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCTCTCGAAAGGCACAGTaGGCAGGCCGTAGGAGATGT +
Preference number: 2 (lower is better)
Translates to: GLHHHLERHSGQAVGDVISRKAQ*AGRRRC
Trigger: ACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGA...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCCTCATCTGTCTCTCTaGCCAACTGTGCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: APGLSQPWGAVLLFILSHPHLSL*PTVLFP
Trigger: TGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
3UTR-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGTCTAGAACATCTTGGTaGAAGTGCCCGCCATTACTC +
Preference number: 2 (lower is better)
Translates to: WQEGETENPVPRVSLRDRSRTSW*KCPPLL
Trigger: GAGTAATGGCGGGCACTTTCACCAAGATGTTCTAGA...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTCTCCGTGGGCACATCTaGCAGGCAGGCACCGGGTCC +
Preference number: 2 (lower is better)
Translates to: PPSHPPKTEENASHEHPRLRGHI*QAGTGS
Trigger: GGACCCGGTGCCTGCCTGGCAGATGTGCCCACGGAG...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGCAGGTCGTCTTTCAGTaGTGCAGGCCTGGGCTCGGA +
Preference number: 2 (lower is better)
Translates to: KKAALPLLRRLGRSVKALQVVFQ*CRPGLG
Trigger: TCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTG...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCCAGGTCGTCTTTCAGTaGTGCAGGCCTGGGCTCGGA +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGQVVFQ*CRPGLG
Trigger: TCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTG...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGGTCTTCAGCTTGTACACCTaGTGCAGCTTCCGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: ASSSSLAKLRTVFMALMVFSLYT*CSFRRY
Trigger: GTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAA...GACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp CTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTGTACATGTAGGCAGCTaGCTCCTTCCTGTTCAGCTT +
Preference number: 2 (lower is better)
Translates to: LHGTDGLLRRVARSGQGIVHVGS*LLPVQL
Trigger: AAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTAC...AATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGTACATGTAGGCAGCTaGCTCCTTCCTGTTCAGCTT +
Preference number: 2 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGVHVGS*LLPVQL
Trigger: AAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTAC...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PPSHPPKTEENASHEHPRSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTCCAGCCAGGGGTGGGTaGACGAGGGGCGAAAGCGCT +
Preference number: 2 (lower is better)
Translates to: PPSHPPKTEENASHEHPRPARGG*TRGESA
Trigger: AGCGCTTTCGCCCCTCGTCCACCCACCCCTGGCTGG...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CAA 90 bp AGCTGCCATGAGAGGCTGAACATGAAGACCACCACGCCCGTGACCTaGACTGTGTTCCGCAGGAAGACATTGATGTTCTGGGAGACCAGG +
Preference number: 2 (lower is better)
Translates to: SCHERLNMKTTTPVT*TVFRRKTLMFWETR
Trigger: CCTGGTCTCCCAGAACATCAATGTCTTCCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
3UTR-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTTGAAATCTAGGAGTTaGCTGGGGTGCCTCAAACCA +
Preference number: 2 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSLKSRS*LGCLKP
Trigger: TGGTTTGAGGCACCCCAGTCAACTCCTAGATTTCAA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGCAGGTCGTCTTTCAGTaGTGCAGGCCTGGGCTCGGA +
Preference number: 2 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVQVVFQ*CRPGLG
Trigger: TCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTG...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCTTCAGCTTGTACACCTaGTGCAGCTTCCGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAFSLYT*CSFRRY
Trigger: GTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAA...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGTGATCCATGGGACATaGCAGGTCGTCTTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: ATSGKARSWALPPSHPPKVIHGT*QVVFQC
Trigger: GCACTGAAAGACGACCTGCCATGTCCCATGGATCAC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGGAAGCGGTGATCCATaGGACATGGCAGGTCGTCTT +
Preference number: 2 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLGSGDP*DMAGRL
Trigger: AAGACGACCTGCCATGTCCCATGGATCACCGCTTCC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGAATCTAGGAGTTGACTaGGGTGCCTCAAACCAAACA +
Preference number: 2 (lower is better)
Translates to: WQEGETENPVPRVSLRDRNLGVD*GASNQT
Trigger: TGTTTGGTTTGAGGCACCCCAGTCAACTCCTAGATT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGAGAGGCCTAGTCTCTaGACATCCCCCAGGCTACTA +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPERPSL*TSPRLL
Trigger: TAGTAGCCTGGGGGATGTCCAGAGACTAGGCCTCTC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAGACTCACAGAGCTaGCAAGAGGGAGAGACGGAA +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPPDSQS*QEGETE
Trigger: TTCCGTCTCTCCCTCTTGCCAGCTCTGTGAGTCTGG...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGAGACTGGCTTAGATTaGCAGCGGGCGATGGCAGAC +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATETGLD*QRAMAD
Trigger: GTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CAA 90 bp CAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCCCTGCTaGTTTTCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: QPWGAVLLFILSHPC*FSSSVSLANCAVPK
Trigger: TTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGAAAACAAGCAGGGATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
3UTR-3UTR TCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTCGTGTGGTTCACAGTaGGACTGGCTTAGATTGGCA +
Preference number: 2 (lower is better)
Translates to: ATSGKARSWALPPSHPPKSCGSQ*DWLRLA
Trigger: TGCCAATCTAAGCCAGTCTCACTGTGAACCACACGA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR TCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCCCTCACTCCCCCAGTTaGGGTTTCGTGTGGTTCACA +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGPHSPS*GFVWFT
Trigger: TGTGAACCACACGAAACCTCAACTGGGGGAGTGAGG...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR TCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCCCTCACTCCCCCAGTTaGGGTTTCGTGTGGTTCACA +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATPHSPS*GFVWFT
Trigger: TGTGAACCACACGAAACCTCAACTGGGGGAGTGAGG...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR TCA 90 bp GCTGAAGGAGACATTCTCCATACAATCTCCCAGGACAAACTCGTAGATGATGAAGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 2 (lower is better)
Translates to: AEGDILHTISQDKLVDDEGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...TTCATCATCTACGAGTTTGTCCTGGGAGATTGTATGGAGAATGTCTCCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR GCA 90 bp CTTGTAGTACTTGCCGTAGATGTTGGACACCATCATGATGATGGGGAAGCCCATTCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: LVVLAVDVGHHHDDGEAHSPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...ATGGGCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
3UTR-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCCCAGACTCACAGAGCTaGCAAGAGGGAGAGACGGAA +
Preference number: 2 (lower is better)
Translates to: VLSTCCNLWQSQILGFATPDSQS*QEGETE
Trigger: TTCCGTCTCTCCCTCTTGCCAGCTCTGTGAGTCTGG...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR TCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTTGAAATCTAGGAGTTaGCTGGGGTGCCTCAAACCA +
Preference number: 2 (lower is better)
Translates to: ATSGKARSWALPPSHPPKLKSRS*LGCLKP
Trigger: TGGTTTGAGGCACCCCAGTCAACTCCTAGATTTCAA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR TCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAAGAGAATGCATCTCATaGACATCCACGTGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: HVATSGKARSWALPPSHPRECIS*TSTWPP
Trigger: TGGAGGCCACGTGGATGTTCATGAGATGCATTCTCT...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGTGATCCATGGGACATaGCAGGTCGTCTTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGVIHGT*QVVFQC
Trigger: GCACTGAAAGACGACCTGCCATGTCCCATGGATCAC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGGGAAGCGGTGATCCATaGGACATGGCAGGTCGTCTT +
Preference number: 2 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVGSGDP*DMAGRL
Trigger: AAGACGACCTGCCATGTCCCATGGATCACCGCTTCC...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAAATCTAGGAGTTGACTaGGGTGCCTCAAACCAAACA +
Preference number: 2 (lower is better)
Translates to: HSETGLDWQRAMADRCPPNLGVD*GASNQT
Trigger: TGTTTGGTTTGAGGCACCCCAGTCAACTCCTAGATT...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR TCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTCGTGTGGTTCACAGTaGGACTGGCTTAGATTGGCA +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGSCGSQ*DWLRLA
Trigger: TGCCAATCTAAGCCAGTCTCACTGTGAACCACACGA...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCCATTCTGGACCTCTTTaGAGAGCCTCTTGTAGTACT +
Preference number: 2 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAHSGPL*RASCST
Trigger: AGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATG...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR TCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTCCTCACTCCCCCAGTTaGGGTTTCGTGTGGTTCACA +
Preference number: 2 (lower is better)
Translates to: PPSHPPKTEENASHEHPRPHSPS*GFVWFT
Trigger: TGTGAACCACACGAAACCTCAACTGGGGGAGTGAGG...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCAATCTAGGAGTTGACTaGGGTGCCTCAAACCAAACA +
Preference number: 2 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGNLGVD*GASNQT
Trigger: TGTTTGGTTTGAGGCACCCCAGTCAACTCCTAGATT...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR GCA 90 bp GCTGAAGGAGACATTCTCCATACAATCTCCCAGGACAAACTCGTAGATGATGAAAGCTTGTACACCTGCTaGAGCTTCCGCAGGTACACC +
Preference number: 2 (lower is better)
Translates to: AEGDILHTISQDKLVDDESLYTC*SFRRYT
Trigger: GGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCT...TTCATCATCTACGAGTTTGTCCTGGGAGATTGTATGGAGAATGTCTCCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR TCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTTTGAAATCTAGGAGTTaGCTGGGGTGCCTCAAACCA +
Preference number: 2 (lower is better)
Translates to: PPSHPPKTEENASHEHPRLKSRS*LGCLKP
Trigger: TGGTTTGAGGCACCCCAGTCAACTCCTAGATTTCAA...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CCA 72 bp GCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTaGGCGATGGGGGCTCTGGCCACCTGGAGCCGCTCC +
Preference number: 3 (lower is better)
Translates to: APGARLFSASIC*AMGALATWSRS
Trigger: GGAGCGGCTCCAGGTGGCCAGAGCCCCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR GCA 72 bp AGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTaGTGGGCGATGGGGGCTCTGGCCACCTGGAGCCGC +
Preference number: 3 (lower is better)
Translates to: RAPGARLFSASI*WAMGALATWSR
Trigger: GCGGCTCCAGGTGGCCAGAGCCCCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CAA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGGTCTCCTCCGCCGTGTaGCTCGCTCTGGCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGVSSAV*LALARA
Trigger: TGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGAC...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CAA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGGTCCGTGAAGGCGTaGGCTCAGGGCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGRSVKA*AQGSRG
Trigger: ACCCCTGCTGCCCTGAGCCAACGCCTTCACGGACCT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CAA 90 bp TCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGAACCAGGGCCGTCACCTaGCCGGGGGACAGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: SVRPPPPSRKAQWAGRRRTRAVT*PGDRLK
Trigger: CTTCAGCCTGTCCCCCGGCAAGGTGACGGCCCTGGT...TCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 72 bp GGAGCCGCTCCTGCCCCCGCATTGCCCACCACCCTGTaGCTCACCAGATACTCGCTCTCGGCATCCAAAGCG +
Preference number: 3 (lower is better)
Translates to: GAAPAPALPTTL*LTRYSLSASKA
Trigger: CGCTTTGGATGCCGAGAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAGCGGCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR GCA 72 bp ACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATaGCCTCCACGCTCCCTACCCGCCCTGGCCAGACTC +
Preference number: 3 (lower is better)
Translates to: TGLDWQRAMADR*PPRSLPALARL
Trigger: GAGTCTGGCCAGGGCGGGTAGGGAGCGTGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CAA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGGCCTCCTCCTCCTCATaGGCGAAGCTCCGGACAGTC +
Preference number: 3 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGASSSS*AKLRTV
Trigger: GACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CCA 72 bp CACGCTCCCTACCCGCCCTGGCCAGACTCACAGAGCTaGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGT +
Preference number: 3 (lower is better)
Translates to: HAPYPPWPDSQS*QEGETENPVPR
Trigger: ACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CCA 72 bp CACCAGCCCAGGAGGCTGATAGTCTGGGAGAGCTCCTaGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: HQPRRLIVWESS*GPSLLSIHLLG
Trigger: GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTATCAGCCTCCTGGGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CAA 90 bp GCCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGGTCGTCTCCTCCGCCGTGTaGCTCGCTCTGGCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: ASSSSLAKLRTVFMALMVVSSAV*LALARA
Trigger: TGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGAC...GACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CAA 90 bp GCGAACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGGCCTCCTCCTCCTCATaGGCGAAGCTCCGGACAGTC +
Preference number: 3 (lower is better)
Translates to: ANSTGSWLTREITRCKYLASSSS*AKLRTV
Trigger: GACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC...CAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 72 bp AAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCACGGGCTCCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: KAQWAGRRRCYP*WSGRTARAPGS
Trigger: TGAGCCAGGAGCCCGTGCTGTTCGCCCGCTCCATCACGGATAACATCTCCTACGGCCTGCCCACTGTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 72 bp CCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGTTGCTCGCTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: PHWRSSGQSSWH*WSPPPCCSLWP
Trigger: TGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CCA 72 bp AGGGACCAGGGGCAAGATGCAGGAAGCGGTGATCCATaGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCC +
Preference number: 3 (lower is better)
Translates to: RDQGQDAGSGDP*DMAGRLSVLQA
Trigger: GGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTGCATCTTGCCCCTGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CAA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGTTCCGCAGGAAGACATaGATGTTCTGGGAGACCAGG +
Preference number: 3 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGFRRKT*MFWETR
Trigger: CCTGGTCTCCCAGAACATCAATGTCTTCCTGCGGAA...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
3UTR-3UTR CAA 90 bp GCCGTCACCTTGCCGGGGGACAGGCTGAAGGAGACATTCTCCATACAATCTCCCACCACGCCCGTGACCTaGACTGTGTTCCGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: AVTLPGDRLKETFSIQSPTTPVT*TVFRRK
Trigger: CTTCCTGCGGAACACAGTCAAGGTCACGGGCGTGGT...GGGAGATTGTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537276.5
3UTR GCA 72 bp GAGCCCGCTGCCCCAGACGTAGTACATGTAGGCAGCTaGCTCCTTCCTGTTCAGCTTGTACACCTGCTGCAG +
Preference number: 3 (lower is better)
Translates to: EPAAPDVVHVGS*LLPVQLVHLLQ
Trigger: CTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CCA 72 bp TTATCCGTGATGGAGCGGGCGAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACACGGTGCAAGTACTTG +
Preference number: 3 (lower is better)
Translates to: LSVMERANSTGS*LTREITRCKYL
Trigger: CAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGCCCGCTCCATCACGGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR CCA 72 bp ACACCAGGAATTCACCAGCCCAGGAGGCTGATAGTCTaGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATC +
Preference number: 3 (lower is better)
Translates to: TPGIHQPRRLIV*ESSWGPSLLSI
Trigger: GATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTATCAGCCTCCTGGGCTGGTGAATTCCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CAA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCAGGTCCGTGAAGGCGTaGGCTCAGGGCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: VLSTCCNLWQSQILGFATRSVKA*AQGSRG
Trigger: ACCCCTGCTGCCCTGAGCCAACGCCTTCACGGACCT...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CAA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCATGAAGGCGATGAGGTaGCCGCTGGTCATCTGGCCT +
Preference number: 3 (lower is better)
Translates to: GLHHHLERHSGQAVGDVIMKAMR*PLVIWP
Trigger: AGGCCAGATGACCAGCGGCAACCTCATCGCCTTCAT...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CAA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACCCTCACTCCCCCAGTaGAGGTTTCGTGTGGTTCAC +
Preference number: 3 (lower is better)
Translates to: VATSGKARSWALPPSHPPPSLPQ*RFRVVH
Trigger: GTGAACCACACGAAACCTCAACTGGGGGAGTGAGGG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CAA 90 bp TCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGAAAGTTCTCCAGGATGTaGACACAGGAGCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: SVRPPPPSRKAQWAGRRRKFSRM*TQELFP
Trigger: TGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACTT...TCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR-3UTR CAA 90 bp GGGCATTGGCCTTCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAAAGTTCTCCAGGATGTaGACACAGGAGCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: GHWPSVRPPPPSRKAQWAKFSRM*TQELFP
Trigger: TGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACTT...TGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 72 bp GATGAAGGCGATGAGGTTGCCGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCCGTAGTAGAGGATGCT +
Preference number: 3 (lower is better)
Translates to: DEGDEVAAGHLA*DDKVAPVVEDA
Trigger: AGCATCCTCTACTACGGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
3UTR TCA 72 bp CTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTaGGACTGGCTTAGATTGGCAGCGGGCGATGGCAGA +
Preference number: 3 (lower is better)
Translates to: LTPPVEVSCGSQ*DWLRLAAGDGR
Trigger: TCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR GCA 72 bp ATGATGGGGAAGCCCATGAAGGTGACCAAGGAGAGCTaGCATGAGAGGCTGAACATGAAGACCACCACGCCC +
Preference number: 3 (lower is better)
Translates to: MMGKPMKVTKES*HERLNMKTTTP
Trigger: GGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCACCTTCATGGGCTTCCCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
3UTR-3UTR CAA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTAGGTCCGTGAAGGCGTaGGCTCAGGGCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: PPSHPPKTEENASHEHPRRSVKA*AQGSRG
Trigger: ACCCCTGCTGCCCTGAGCCAACGCCTTCACGGACCT...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR-3UTR CAA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCCCCTCACTCCCCCAGTaGAGGTTTCGTGTGGTTCAC +
Preference number: 3 (lower is better)
Translates to: VLSTCCNLWQSQILGFATPSLPQ*RFRVVH
Trigger: GTGAACCACACGAAACCTCAACTGGGGGAGTGAGGG...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR TCA 72 bp ATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATaGACATCCACGTGGCCTCCAGACAGCAGAGCACAG +
Preference number: 3 (lower is better)
Translates to: IPSTKDRRECIS*TSTWPPDSRAQ
Trigger: CTGTGCTCTGCTGTCTGGAGGCCACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR GCA 72 bp ATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTaGCACCATCCCATCCACCAAAGACAGAAGAGAATG +
Preference number: 3 (lower is better)
Translates to: MLQPLAKPDPGL*HHPIHQRQKRM
Trigger: CATTCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CCA 72 bp TCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTaGGCTTTGCCACCATCCCATCCACCAAAGACAGAA +
Preference number: 3 (lower is better)
Translates to: SQHVATSGKARS*ALPPSHPPKTE
Trigger: TTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR CCA 72 bp TTTATTGACCGGGTTCTCTCAACATGTTGCAACCTCTaGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCA +
Preference number: 3 (lower is better)
Translates to: FIDRVLSTCCNL*QSQILGFATIP
Trigger: TGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
3UTR GCA 72 bp GTAGTACACTTTATTGACCGGGTTCTCTCAACATGTTaGAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCC +
Preference number: 3 (lower is better)
Translates to: VVHFIDRVLSTC*NLWQSQILGFA
Trigger: GGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAATAAAGTGTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCCTCCCACCCGCGCTaGGCCGCTGCAAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGASHPR*AAARSE
Trigger: CTCCGACCTTGCAGCGGCGCAGCGCGGGTGGGAGGC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGGTTTGGAGCCGGGTaGGCAGGCGTGGGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGFGAG*AGVGPP
Trigger: CGGAGGCCCCACGCCTGCGCACCCGGCTCCAAACCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGEGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGEGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCGGGCCTGAGATGTaGGGGCCAGGCGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRAGPEM*GPGAAG
Trigger: TCCTGCGGCGCCTGGCCCTCACATCTCAGGCCCGGC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCTCCAGGGCCTGGGTaGCTGGCCGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGAPGPG*LAARWT
Trigger: TGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCCCTGGGCCAGCAGCTaGTGGTGGGTGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGPWASS*WWVPCC
Trigger: GCAGCAGGGCACCCACCAGCAGCTGCTGGCCCAGGG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTGGGTGCTGCGGGCGTaGGCCGAGAGGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGWVLRA*AERAAL
Trigger: CAAGGCTGCCCTCTCGGCGCACGCCCGCAGCACCCA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACCGTGGCGGCCAGCTaGATGGAGCCCGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGTVAAS*MEPGPW
Trigger: CCAAGGGCCGGGCTCCATGCAGCTGGCCGCCACGGT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCCGCTGCACCAGCTTaGCGTAGAGGCCGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGAAAPA*RRGRPG
Trigger: CCCAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGGC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDREGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACGGTGACGGGTACTaGGCGTCGCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRDGDGY*ASPGPG
Trigger: GCCGGGGCCTGGCGACGCCCAGTACCCGTCACCGTC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCGAAGGGCGCGGGGCTaGAGGGTAGGAGAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRRRARG*RVGERG
Trigger: CCCGCGCTCTCCTACCCTCCAGCCCCGCGCCCTTCG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATGCCTCCCACCCGCGCTaGGCCGCTGCAAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHASHPR*AAARSE
Trigger: CTCCGACCTTGCAGCGGCGCAGCGCGGGTGGGAGGC...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCCCTGGGCCAGCAGCTaGTGGTGGGTGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRPWASS*WWVPCC
Trigger: GCAGCAGGGCACCCACCAGCAGCTGCTGGCCCAGGG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGACCTGGAGCCGCTCCTaGCCCCGCATTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGTWSRS*PRIAHH
Trigger: GTGGTGGGCAATGCGGGGGCAGGAGCGGCTCCAGGT...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGCAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: FWETRSLTMVVSEVRREMQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...CATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCCGCTGCACCAGCTTaGCGTAGAGGCCGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRAAAPA*RRGRPG
Trigger: CCCAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCTTCCGGATGGGCCTaGGGTCCATGCCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGPSGWA*GPCPRS
Trigger: TGAGCGCGGGCATGGACCCCAGGCCCATCCGGAAGG...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCGGAGCCCCTGGAGGTaGAGCACGTGGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRRSPWR*STWWAR
Trigger: CCTGGCCCACCACGTGCTCCACCTCCAGGGGCTCCG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTTCCGCGCTGCTCATTaGAGACTGCGCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGFRAAH*RLRRTR
Trigger: CCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGTTACCTGGCACCAGGTaGGCTCTGGGAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRLPGTR*ALGGGA
Trigger: CGCGCCCCCTCCCAGAGCTCACCTGGTGCCAGGTAA...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp TCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: SSAVLLALARAFWTSLESGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...GCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAAGTCTGCGGCGGGCTaGAGCCCCAGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGKSAAG*SPSICR
Trigger: GCGGCAGATGCTGGGGCTTCAGCCCGCCGCAGACTT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGGGGTGGCAGGCAGGTaGGGGCTCCGTTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRGVAGR*GLRCLG
Trigger: ACCAAGGCAACGGAGCCCTCACCTGCCTGCCACCCC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGGGCCTCTTCCAGGTaGGTGTGTGACCCATGCGGC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGASSR*VCDPCG
Trigger: GCCGCATGGGTCACACACTCACCTGGAAGAGGCCCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCCCGCGCTGCGCCGCTaGAAGGTCGGAGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRPALRR*KVGAET
Trigger: AGTCTCAGCTCCGACCTTGCAGCGGCGCAGCGCGGG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGCCTCCCACCCGCGCTaGGCCGCTGCAAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPASHPR*AAARSE
Trigger: CTCCGACCTTGCAGCGGCGCAGCGCGGGTGGGAGGC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGCTCCAGGGCCTGGGTaGCTGGCCGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSAPGPG*LAARWT
Trigger: TGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCCAAGCTGCCATCGTaGACCATGGTCGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGAKLPS*TMVGCR
Trigger: CCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTGGTGGGTGCCCTGCTaGACTACGCGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGWWVPC*TTRPLS
Trigger: GGACAAGGGCCGCGTAGTGCAGCAGGGCACCCACCA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTGCTGGTGGGTGCCCTaGTGCACTACGCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGCWWVP*CTTRPL
Trigger: CAAGGGCCGCGTAGTGCAGCAGGGCACCCACCAGCA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCAGCTGCTGGTGGGTaGCCTGCTGCACTACGCGGC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRAAAGG*PAALRG
Trigger: GCCGCGTAGTGCAGCAGGGCACCCACCAGCAGCTGC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCAGCTGCTGGTGGGTaGCCTGCTGCACTACGCGGC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRAAAGG*PAALRG
Trigger: GCCGCGTAGTGCAGCAGGGCACCCACCAGCAGCTGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGAGGTCCCCGCCGCCCCGAATACCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: DQVADHGGVRGQAGDEVPAAPNT*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGGTATTCGGGGCGGC...GGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTACAGGCGTGAGGGGCTaGGGAGCTCGAGGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPTGVRG*GARGPA
Trigger: CGCCGGCCCTCGAGCTCCGCAGCCCCTCACGCCTGT...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCTGCTGGTTGGAGGTaGGCGGGTGCTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGPAGWR*AGAEGQ
Trigger: CTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGG...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGTAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCACCCGGCCCTCCAGGTaGTCGGGGGCCAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSTRPSR*SGAKLP
Trigger: TGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGT...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATACCCGGCCCTCCAGGTaGTCGGGGGCCAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHTRPSR*SGAKLP
Trigger: TGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGT...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CTGGACCACCAGCAGTGTGAGCCCGCTGCCCCAGACGTAGTACATGTAGGCAGCGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LDHQQCEPAAPDVVHVGSATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...GCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACCAGCCAGGGGTGGGTaGACGAGGGGCGAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGPARGG*TRGESA
Trigger: AGCGCTTTCGCCCCTCGTCCACCCACCCCTGGCTGG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCAGCCAGGGGTGGGTaGACGAGGGGCGAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPARGG*TRGESA
Trigger: AGCGCTTTCGCCCCTCGTCCACCCACCCCTGGCTGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCTTAGAGCGGCCCCTTaGCCGCTGGTTCCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRLRAAP*PLVPRL
Trigger: GAGGCGCGGAACCAGCGGCCAAGGGGCCGCTCTAAG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGGGTGTCCTCCACCGTaGCGGCCAGCTGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRGCPPP*RPAAWS
Trigger: GCTCCATGCAGCTGGCCGCCACGGTGGAGGACACCC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTTACCTGGCACCAGGTaGGCTCTGGGAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHLPGTR*ALGGGA
Trigger: CGCGCCCCCTCCCAGAGCTCACCTGGTGCCAGGTAA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCTTACCTGGCACCAGGTaGGCTCTGGGAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGLPGTR*ALGGGA
Trigger: CGCGCCCCCTCCCAGAGCTCACCTGGTGCCAGGTAA...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGGGCCTGCGCACCTCTaGGAAGAGCAGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGGPAHL*EEQQLH
Trigger: GTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CGCTCCTGCCCCCGCATTGCCCACCACCCTGTGACTCACCAGATACTCGCTCTCCCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RSCPRIAHHPVTHQILALPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...GAGAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGAGGTCAGGCGGGAGATaGGGTCCCCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGRSGGR*GPLCGS
Trigger: AGAACCGCACAGGGGACCTCATCTCCCGCCTGACCT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CGCTCCTGCCCCCGCATTGCCCACCACCCTGTGACTCACCAGATACTCGCTCTCGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RSCPRIAHHPVTHQILALAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...GAGAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRLLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CTGGACCACCAGCAGTGTGAGCCCGCTGCCCCAGACGTAGTACATGTAGGCAGCCTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LDHQQCEPAAPDVVHVGSLLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...GCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCGTTGTGGCCAGCTGTaGAGTCTGCGGCGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGRCGQL*SLRRAE
Trigger: TTCAGCCCGCCGCAGACTTCACAGCTGGCCACAACG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCCCCATCAGGCCTTGTaGCTGCCGTTGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGPHQAL*LPLATG
Trigger: GCCTGTAGCCAACGGCAGTCACAAGGCCTGATGGGG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGAGACTGGCGTGCGTTaGGACAGGCTGATGGACGGG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGETGVR*DRLMDG
Trigger: CCCGTCCATCAGCCTGTCTCAACGCACGCCAGTCTC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGTGAGTGCCCAGGCCTaGGTCGTGCCATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGVSAQA*VVPSAG
Trigger: GCCTGCAGATGGCACGACTCAGGCCTGGGCACTCAC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACTCCGCTCTTCCCGCTaGTCCTCCCCGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPLRSSR*SSPPPT
Trigger: GGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGAGCGGTACAGGCAGGCTaGCCAGAGATCCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGAVQAG*PEIQHR
Trigger: TCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGC...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGATCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGSPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGSPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGTCGGGGGCCAAGCTaGCATCGTGCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRGRGPS*HRAPWS
Trigger: CGACCATGGTGCACGATGGCAGCTTGGCCCCCGACC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACAATGAGGTGCGCGTaGTCCACGGTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGTMRCA*STVLSR
Trigger: CCGGCTGAGCACCGTGGAGCACGCGCACCTCATTGT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCACCTGGAGCCGCTCCTaGCCCCGCATTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGTWSRS*PRIAHH
Trigger: GTGGTGGGCAATGCGGGGGCAGGAGCGGCTCCAGGT...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCTGTAGCCGGTCTGTaGCTGCCCCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPVAGL*LPQARA
Trigger: TGCTCTGGCCTGGGGCAGGCACAGACCGGCTACAGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGGGGACGCTCAGTCATaGCTCTGTGCAGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRGDAQS*LCAAGP
Trigger: AGGCCCGGCTGCACAGAGGCATGACTGAGCGTCCCC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCAGCAGGCTCGGGTCTaGGGTGCAGTTTCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRQQARV*GAVSAL
Trigger: CAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR CCA 90 bp TCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCAGCAGGCTCGGGTCTaGGGTGCAGTTTCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSAVLLALARAFWTSLESQQARV*GAVSAL
Trigger: CAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTG...GCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRTAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAACCAGGGGTCCCGGATaGGCCTGCGCACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGTRGPG*ACAPLR
Trigger: TCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGACCAGGGGTCCCGGATaGGCCTGCGCACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRTRGPG*ACAPLR
Trigger: TCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGT...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGACCAGGGGTCCCGGATaGGCCTGCGCACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRTRGPG*ACAPLR
Trigger: TCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATACCAGGGGTCCCGGATaGGCCTGCGCACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LCGLHHHLERHSGQAVGDTRGPG*ACAPLR
Trigger: TCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGT...ATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGTGCCTGGCCGCACGGTaGACAGCAGCCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRCLAAR*TAATRA
Trigger: TGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCA...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTACCCGGCCCTCCAGGTaGTCGGGGGCCAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPTRPSR*SGAKLP
Trigger: TGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGT...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAACCCGGCCCTCCAGGTaGTCGGGGGCCAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPTRPSR*SGAKLP
Trigger: TGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGT...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGGAGTGCCCTGGGAATaGGGCAGGGACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRGVPWE*GRDQGQ
Trigger: TTGCCCCTGGTCCCTGCCCCATTCCCAGGGCACTCC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCTCCCTACCCGCCCTaGCCAGACTCACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRAPYPP*PDSQSW
Trigger: CCAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCGGGCGATGGGGGCTCTaGCCACCTGGAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLHHHLERHSGQAVGDVIGRWGL*PPGAAP
Trigger: AGGAGCGGCTCCAGGTGGCCAGAGCCCCCATCGCCC...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGATCAGCATCCATCTGCTaGGCGATGGGGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGSASIC*AMGALA
Trigger: GGCCAGAGCCCCCATCGCCCAGCAGATGGATGCTGA...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGAAGGAGGCTGATAGTCTaGGAGAGCTCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGRRLIV*ESSWGP
Trigger: CGGGCCCCAGGAGCTCTCCCAGACTATCAGCCTCCT...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGCAGCCCGCGGCGCCATaGCTCACGTCGGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKQPAAP*LTSAPA
Trigger: TGCGGGAGCCGACGTGAGCCATGGCGCCGCGGGCTG...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAGCAGGGCGGTCGAGGTaGGAACGGAGCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPAGRSR*ERSSPG
Trigger: CCCGGGGCTGCTCCGTTCCCACCTCGACCGCCCTGC...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACCGAGAGGGCAGCCTTaGAAGTGGGCGCAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGPRGQP*KWAQLR
Trigger: CCGAAGCTGCGCCCACTTCCAAGGCTGCCCTCTCGG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATGGCTTCCTTCCGGATaGGCCTGGGGTCCATGCCCG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGWLPSG*AWGPCP
Trigger: CGGGCATGGACCCCAGGCCCATCCGGAAGGAAGCCA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCACACCACCGGTTACTaGCTCCTGGATGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGHTTGY*LLDEGA
Trigger: GGCCCCCTCATCCAGGAGCCAGTAACCGGTGGTGTG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGTGAGCCCGACCTGGTaGACGATGAGGGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGVSPTW*TMRASV
Trigger: CACCGAAGCCCTCATCGTCCACCAGGTCGGGCTCAC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGCCGGGCCAGGACCTaGAGCTGGGCTGCCACTATG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSGRART*SWAATM
Trigger: CATAGTGGCAGCCCAGCTCCAGGTCCTGGCCCGGCC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
3UTR CAA 72 bp CCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTaGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLRRLGRSVKA*AQGSRGKECPG
Trigger: CCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTGCGGTCCAGGTGGCTaGAGACATAGATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGCGPGG*RHRWPW
Trigger: CCACGGCCATCTATGTCTTCAGCCACCTGGACCGCA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGGGCCTGCGCACCTCTaGGAAGAGCAGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRGPAHL*EEQQLH
Trigger: GTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAGGTCAGGCGGGAGATaGGGTCCCCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGRSGGR*GPLCGS
Trigger: AGAACCGCACAGGGGACCTCATCTCCCGCCTGACCT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGAGGTCAGGCGGGAGATaGGGTCCCCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: FWETRSLTMVVSEVRREMRSGGR*GPLCGS
Trigger: AGAACCGCACAGGGGACCTCATCTCCCGCCTGACCT...CATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: GLHHHLERHSGQAVGDVIGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSLLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGTGTCCAGCACCACAATaGGGTGCGCGTGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRCPAPQ*GARAPR
Trigger: CCGTGGAGCACGCGCACCTCATTGTGGTGCTGGACA...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAAAGTCTGCGGCGGGCTaGAGCCCCAGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPKSAAG*SPSICR
Trigger: GCGGCAGATGCTGGGGCTTCAGCCCGCCGCAGACTT...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCGTTGTGGCCAGCTGTaGAGTCTGCGGCGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRRCGQL*SLRRAE
Trigger: TTCAGCCCGCCGCAGACTTCACAGCTGGCCACAACG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCCCATCAGGCCTTGTaGCTGCCGTTGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPHQAL*LPLATG
Trigger: GCCTGTAGCCAACGGCAGTCACAAGGCCTGATGGGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCCCCATCAGGCCTTGTaGCTGCCGTTGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRPHQAL*LPLATG
Trigger: GCCTGTAGCCAACGGCAGTCACAAGGCCTGATGGGG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCTGCAAGGTCGGAGCTaGGACTGGCGTGCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGLQGRS*DWRALR
Trigger: TCTCAACGCACGCCAGTCTCAGCTCCGACCTTGCAG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGCGGCAGACACAGGCGTaGGGGGCTGCGGAGCTCGAG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKRQTQA*GAAELE
Trigger: CTCGAGCTCCGCAGCCCCTCACGCCTGTGTCTGCCG...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACGAGTTTGCGACCTCTaGGTCACTGGGTGGGCGCGT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGRVCDL*VTGWAR
Trigger: ACGCGCCCACCCAGTGACTCAGAGGTCGCAAACTCG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGCTCCGCTCTTCCCGCTaGTCCTCCCCGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKLRSSR*SSPPPT
Trigger: GGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAG...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp CTGGACCACCAGCAGTGTGAGCCCGCTGCCCCAGACGTAGTACATGTAGGCAGCCTGCTCATTGAAGACTaGGCCGGACGCGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LDHQQCEPAAPDVVHVGSLLIED*AGRGPR
Trigger: GCGAGGACCGCGTCCGGCGCAGTCTTCAATGAGCAG...GCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCGGTACAGGCAGGCTaGCCAGAGATCCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRAVQAG*PEIQHR
Trigger: TCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCGGTACAGGCAGGCTaGCCAGAGATCCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGAVQAG*PEIQHR
Trigger: TCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGGTCCCGGATGGGCCTaGGCACCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGGPGWA*APLRRA
Trigger: TGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGGTCCCGGATGGGCCTaGGCACCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRGPGWA*APLRRA
Trigger: TGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACGGTGCTCAGCCGGTaGGCGATGATGAGTACCGTG +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGTVLSR*AMMSTV
Trigger: CACGGTACTCATCATCGCGCACCGGCTGAGCACCGT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAACAATGAGGTGCGCGTaGTCCACGGTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGTMRCA*STVLSR
Trigger: CCGGCTGAGCACCGTGGAGCACGCGCACCTCATTGT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGACAATGAGGTGCGCGTaGTCCACGGTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRTMRCA*STVLSR
Trigger: CCGGCTGAGCACCGTGGAGCACGCGCACCTCATTGT...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTGCTGGTGGGTGCCCTaGTGCACTACGCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSCWWVP*CTTRPL
Trigger: CAAGGGCCGCGTAGTGCAGCAGGGCACCCACCAGCA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGCAGCTGCTGGTGGGTaGCCTGCTGCACTACGCGGC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPAAAGG*PAALRG
Trigger: GCCGCGTAGTGCAGCAGGGCACCCACCAGCAGCTGC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAAGGCACCGGGTCCTCTaGCCCACCGGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPRHRVL*PTGRSR
Trigger: CCTGCTTCTCCCGGTGGGGCAGAGGACCCGGTGCCT...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCAGGTCGTCTTTCAGTaGTGCAGGCCTGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGQVVFQ*CRPGLG
Trigger: TCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAGCCTCTGTCCCATGTaGTGCCGTGAGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGSLCPM*CREPDL
Trigger: CAGGTCGGGCTCACGGCAGCACATGGGACAGAGGCT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGGCCAGGCCTGTTACCTaGCACCAGGTGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FWETRSLTMVVSEVRREMARPVT*HQVSSG
Trigger: CCCAGAGCTCACCTGGTGCCAGGTAACAGGCCTGGC...CATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGCCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FWETRSLTMVVSEVRREMPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...CATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHTAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTCTTGGCCACACCAATaGTGGCTCCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGSWPHQ*WLPAAG
Trigger: GCCTGCTGCTGGGAGCCACCATTGGTGTGGCCAAGA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTCTTGGCCACACCAATaGTGGCTCCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGSWPHQ*WLPAAG
Trigger: GCCTGCTGCTGGGAGCCACCATTGGTGTGGCCAAGA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATACCAGGGGTCCCGGATaGGCCTGCGCACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHTRGPG*ACAPLR
Trigger: TCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGT...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTGCCTGGCCGCACGGTaGACAGCAGCCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSCLAAR*TAATRA
Trigger: TGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTGCCTGGCCGCACGGTaGACAGCAGCCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHCLAAR*TAATRA
Trigger: TGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GCCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGGTCGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: ASSSSLAKLRTVFMALMVAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...GACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCCGTGTTGCTCGCTCTaGCCAGGGCATTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGPCCSL*PGHSGP
Trigger: AGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCGTGTTGCTCGCTCTaGCCAGGGCATTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGPCCSL*PGHSGP
Trigger: AGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGG...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATCCAGGATGAGGACTaGGGGGTTCCGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGIQDED*GVPHQS
Trigger: GCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGAT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGATCCAGGATGAGGACTaGGGGGTTCCGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGIQDED*GVPHQS
Trigger: GCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGAT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGAATCCAGGATGAGGACTaGGGGGTTCCGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGIQDED*GVPHQS
Trigger: GCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGAT...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGCCGCTGCACCAGCTTaGCGTAGAGGCCGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKAAAPA*RRGRPG
Trigger: CCCAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGGC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAGGCTCGGAGGGCAGCTaGGGGCCTCCGTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPGSEGS*GPPWAH
Trigger: ATGTGCCCACGGAGGCCCCCAGCTGCCCTCCGAGCC...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCATCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGCTCCCTACCCGCCCTaGCCAGACTCACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSAPYPP*PDSQSW
Trigger: CCAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGAGGGGCGAAAGCGCTaGGTGCCGGGCTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLEGRKR*VPGWGH
Trigger: GTGCCCCCAGCCCGGCACCCAGCGCTTTCGCCCCTC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGTGTCCTCAGCTCGGCTaGTTCTCCACGAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRCPQLG*FSTSSG
Trigger: CCCGGAGCTCGTGGAGAACCAGCCGAGCTGAGGACA...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR CCA 90 bp CTCCGGACAGTCTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGCCATCTGCTGGGCGATaGGGGCTCTGGCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LRTVFMALMVSSAVLLALPSAGR*GLWPPG
Trigger: TCCAGGTGGCCAGAGCCCCCATCGCCCAGCAGATGG...CAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp TCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGAGTCTGGGAGAGCTCCTaGGGCCCGTCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVRPPPPSRKAQWAGRRRVWESS*GPSLLS
Trigger: GCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGAC...TCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GGGCATTGGCCTTCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGTCTGGGAGAGCTCCTaGGGCCCGTCTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GHWPSVRPPPPSRKAQWAVWESS*GPSLLS
Trigger: GCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGAC...TGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp CGCTCCTGCCCCCGCATTGCCCACCACCCTGTGACTCACCAGATACTCGCTCTCGTCCAGAGTGGCTCCTaGCTCCCCACTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: RSCPRIAHHPVTHQILALVQSGS*LPTLNT
Trigger: GGTGTTGAGAGTGGGGAGCCAGGAGCCACTCTGGAC...GAGAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCAGGTTGCCATGGATaGCCTGCTGGATCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRAGCHG*PAGSAG
Trigger: CCCCGCAGATCCAGCAGGCCATCCATGGCAACCTGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442028.6
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCACCGCTGCGGGGACTaGAGTCGGCGGAGAAAACCG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSHRCGD*SRRRKP
Trigger: CGGTTTTCTCCGCCGACTCCAGTCCCCGCAGCGGTG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCGACCTCTGAGTCACTaGGTGGGCGCGTCGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGRPLSH*VGASER
Trigger: TCTTTCCGACGCGCCCACCCAGTGACTCAGAGGTCG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGCTGGAGCAGAATCCTaGCTTCCTTCCGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGAGAES*LPSGWA
Trigger: GGCCCATCCGGAAGGAAGCCAGGATTCTGCTCCAGC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGGGCGCCCTGTATTTTaGGGGCCTCTTCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGGRPVF*GPLPGE
Trigger: CTCACCTGGAAGAGGCCCCCAAAATACAGGGCGCCC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTTTCCGCGCTGCTCATTaGAGACTGCGCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPFRAAH*RLRRTR
Trigger: CCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAA...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGAGGTGGGCGGGTGCTaGAGGCCAGGTTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSEVGGC*RPGCSS
Trigger: TGAGCTACAACCTGGCCTTCAGCACCCGCCCACCTC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATGCGGTCCAGGTGGCTaGAGACATAGATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGCGPGG*RHRWPW
Trigger: CCACGGCCATCTATGTCTTCAGCCACCTGGACCGCA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCTCCTGGGACACCAGTaGGCGGAAGAGACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGLLGHQ*AEETVS
Trigger: CGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATAGGTCAGGCGGGAGATaGGGTCCCCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHRSGGR*GPLCGS
Trigger: AGAACCGCACAGGGGACCTCATCTCCCGCCTGACCT...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp CTCCGGACAGTCTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LRTVFMALMVSSAVLLALCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...CAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp AACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGCTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSTGSWLTREITRCKYLWLLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...CCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPLLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCGTTGTGGCCAGCTGTaGAGTCTGCGGCGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSRCGQL*SLRRAE
Trigger: TTCAGCCCGCCGCAGACTTCACAGCTGGCCACAACG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGATTGCCCACCACCCTGTaGCTCACCAGATACTCGCTC +
Preference number: 4 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGLPTTL*LTRYSL
Trigger: GAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAA...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp CTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATTCTCCCGGGTTCAAGTaGGTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LCGLHHHLERHSGQAVGDSPGFK*VSCLSL
Trigger: GAGGCTGAGGCAGGAGACTCACTTGAACCCGGGAGA...ATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426173.6
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCTGCTCATTGAAGACTaGGCCGGACGCGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSLLIED*AGRGPR
Trigger: GCGAGGACCGCGTCCGGCGCAGTCTTCAATGAGCAG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATGGCTCGGGTCTGGGGTaGAGTTTCCGCGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHGSGLG*SFRAAH
Trigger: ATGAGCAGCGCGGAAACTGCACCCCAGACCCGAGCC...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATGCGGTACAGGCAGGCTaGCCAGAGATCCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHAVQAG*PEIQHR
Trigger: TCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGC...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp CTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTGGTCCCGGATGGGCCTaGGCACCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHGTDGLLRRVARSGQGIGPGWA*APLRRA
Trigger: TGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACC...AATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGCTCCAGGGCCTGGGTaGCTGGCCGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPAPGPG*LAARWT
Trigger: TGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGCTCCAGGGCCTGGGTaGCTGGCCGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLAPGPG*LAARWT
Trigger: TGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCTGCGGCAAATGAGCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGLRQMS*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGCTCATTTGCCGCAG...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCTGCGGCAAATGAGCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGLRQMS*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGCTCATTTGCCGCAG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTTCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LHGTDGLLRRVARSGQGISPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...AATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGCCAAGCTGCCATCGTaGACCATGGTCGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPAKLPS*TMVGCR
Trigger: CCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGGTCGGGGGCCAAGCTaGCATCGTGCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPGRGPS*HRAPWS
Trigger: CGACCATGGTGCACGATGGCAGCTTGGCCCCCGACC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 4 (lower is better)
Translates to: SSAVLLALARAFWTSLESGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...GCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: NSTGSWLTREITRCKYLWAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...CCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAACGGTGCTCAGCCGGTaGGCGATGATGAGTACCGTG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGTVLSR*AMMSTV
Trigger: CACGGTACTCATCATCGCGCACCGGCTGAGCACCGT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTACCCTGGGCCAGCAGCTaGTGGTGGGTGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLPWASS*WWVPCC
Trigger: GCAGCAGGGCACCCACCAGCAGCTGCTGGCCCAGGG...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGCTCCGTGGGCACATCTaGCAGGCAGGCACCGGGTCC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKLRGHI*QAGTGS
Trigger: GGACCCGGTGCCTGCCTGGCAGATGTGCCCACGGAG...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTTGCCATGGATGGCCTaGTGGATCTGCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGLPWMA*WICGDR
Trigger: TCTGTCCCCGCAGATCCAGCAGGCCATCCATGGCAA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442028.6
CDS-3UTR GCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGGAGGGCCGGCGCCCCTaGTTGCCTCTGCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALEGRRP*LPLREV
Trigger: CACCTCCCGCAGAGGCAAGCAGGGGCGCCGGCCCTC...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACATGCCCGCGCTCACTaGCAAGATCTTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGHARAH*QDLSGP
Trigger: GGGGCCAGAAAGATCTTGGCAGTGAGCGCGGGCATG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGTCCGAGCCTCTGCTGTaGGCAACAGCCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRSEPLL*ATASVP
Trigger: TGGGACAGAGGCTGTTGCGCACAGCAGAGGCTCGGA...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCAGCAGGCTCGGGTCTaGGGTGCAGTTTCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPQQARV*GAVSAL
Trigger: CAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACCTGCTGGTTGGAGGTaGGCGGGTGCTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPPAGWR*AGAEGQ
Trigger: CTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGCCTGCTGGTTGGAGGTaGGCGGGTGCTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: NSTGSWLTREITRCKYLWPAGWR*AGAEGQ
Trigger: CTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGG...CCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGTCTTGGCCACACCAATaGTGGCTCCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRSWPHQ*WLPAAG
Trigger: GCCTGCTGCTGGGAGCCACCATTGGTGTGGCCAAGA...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCGTGTTGCTCGCTCTaGCCAGGGCATTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPCCSL*PGHSGP
Trigger: AGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCCTCCTCCTCCTCATTaGCGAAGCTCCGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGPPPPH*RSSGQS
Trigger: AGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAACCCGGCCCTCCAGGTaGTCGGGGGCCAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLTRPSR*SGAKLP
Trigger: TGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGT...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAACCCGGCCCTCCAGGTaGTCGGGGGCCAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPTRPSR*SGAKLP
Trigger: TGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGT...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGNSTGS*LTREIT
Trigger: TGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGNSTGS*LTREIT
Trigger: TGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTTGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGCCGCTGCACCAGCTTaGCGTAGAGGCCGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLAAAPA*RRGRPG
Trigger: CCCAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGGC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCTACAGGCTCGTTGTaGCCAGCTGTGAAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGATGSL*PAVKSA
Trigger: CGCAGACTTCACAGCTGGCCACAACGAGCCTGTAGC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGGCTCGGAGGGCAGCTaGGGGCCTCCGTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPGSEGS*GPPWAH
Trigger: ATGTGCCCACGGAGGCCCCCAGCTGCCCTCCGAGCC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGAGTGCCCTGGGAATaGGGCAGGGACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPGVPWE*GRDQGQ
Trigger: TTGCCCCTGGTCCCTGCCCCATTCCCAGGGCACTCC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGATTGGCAGCGGGCGATaGCAGACAGATGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRIGSGR*QTDALH
Trigger: GTGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAAT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACCAGCCAGGGGTGGGTaGACGAGGGGCGAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPPARGG*TRGESA
Trigger: AGCGCTTTCGCCCCTCGTCCACCCACCCCTGGCTGG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGCTTAGAGCGGCCCCTTaGCCGCTGGTTCCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKLRAAP*PLVPRL
Trigger: GAGGCGCGGAACCAGCGGCCAAGGGGCCGCTCTAAG...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCTGCCTCTGCGGGAGGTaGGCGCGCCCGGGACGGAAC +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATCLCGR*ARPGRN
Trigger: GTTCCGTCCCGGGCGCGCCCACCTCCCGCAGAGGCA...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTATGGCGGCCAGCTGCATaGAGCCCGGCCCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLWRPAA*SPALGH
Trigger: GTGCCCAAGGGCCGGGCTCCATGCAGCTGGCCGCCA...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCTTCCGCGCTGCTCATTaGAGACTGCGCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAFRAAH*RLRRTR
Trigger: CCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAA...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCATTACCTGGCACCAGGTaGGCTCTGGGAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPLPGTR*ALGGGA
Trigger: CGCGCCCCCTCCCAGAGCTCACCTGGTGCCAGGTAA...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGAGGTGGGCGGGTGCTaGAGGCCAGGTTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPEVGGC*RPGCSS
Trigger: TGAGCTACAACCTGGCCTTCAGCACCCGCCCACCTC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCCGTCACCTTGCCGGGGGACAGGCTGAAGGAGACATTCTCCATACAATCTCCCGAGGTGGGCGGGTGCTaGAGGCCAGGTTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: AVTLPGDRLKETFSIQSPEVGGC*RPGCSS
Trigger: TGAGCTACAACCTGGCCTTCAGCACCCGCCCACCTC...GGGAGATTGTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTGCGGTCCAGGTGGCTaGAGACATAGATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSCGPGG*RHRWPW
Trigger: CCACGGCCATCTATGTCTTCAGCCACCTGGACCGCA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp ATGAAGGCGATGAGGTTGCCGCTGGTCATCTGGCCTGAGATGACAAGGTGGCCCGGGCCTGCGCACCTCTaGGAAGAGCAGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: MKAMRLPLVIWPEMTRWPGPAHL*EEQQLH
Trigger: GTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCC...GGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGAATACCTGCGGCAAATaGGCTGCCAATGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGNTCGK*AANGQQ
Trigger: CTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GGGCATTGGCCTTCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCACTCCTGGGACACCAGTaGGCGGAAGAGACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: GHWPSVRPPPPSRKAQWALLGHQ*AEETVS
Trigger: CGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAG...TGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SSAVLLALARAFWTSLESQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...GCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GGGCATTGGCCTTCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCATCATCTGGCCTGAGATaGCAAGGTGGCCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: GHWPSVRPPPPSRKAQWASSGLR*QGGPRS
Trigger: ACTACGGGGGCCACCTTGTCATCTCAGGCCAGATGA...TGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATCGGCTGCCGGTCGATaGACTCGAACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGSAAGR*TRTPSQ
Trigger: CTGAGAAGGTGTTCGAGTTCATCGACCGGCAGCCGA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTGCCGGGGGACAGGCTaGAGGAGACATTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHCRGTG*RRHSAG
Trigger: TCCTGCAGAATGTCTCCTTCAGCCTGTCCCCCGGCA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp GCCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGGTCTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASSSSLAKLRTVFMALMVCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...GACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGRRCYP*WSGRTA
Trigger: TGCTGTTCGCCCGCTCCATCACGGATAACATCTCCT...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPLLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAAAGTCTGCGGCGGGCTaGAGCCCCAGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPKSAAG*SPSICR
Trigger: GCGGCAGATGCTGGGGCTTCAGCCCGCCGCAGACTT...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAAAGTCTGCGGCGGGCTaGAGCCCCAGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLKSAAG*SPSICR
Trigger: GCGGCAGATGCTGGGGCTTCAGCCCGCCGCAGACTT...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCGTTGTGGCCAGCTGTaGAGTCTGCGGCGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPRCGQL*SLRRAE
Trigger: TTCAGCCCGCCGCAGACTTCACAGCTGGCCACAACG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCCTCACTCCCCCAGTTaGGGTTTCGTGTGGTTCACA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGPHSPS*GFVWFT
Trigger: TGTGAACCACACGAAACCTCAACTGGGGGAGTGAGG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACCTCTCCCCGTCCTGTaGAGGCACGACCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPPLPVL*RHDPVQ
Trigger: CTGAACTGGGTCGTGCCTTCACAGGACGGGGAGAGG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR TCA 90 bp CTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATCAAGGAGAGCTGCCATaGGAGGCTGTGCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LCGLHHHLERHSGQAVGDQGELP*EAVRFS
Trigger: TGAGAACCGCACAGCCTCTCATGGCAGCTCTCCTTG...ATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426173.6
CDS-3UTR TCA 90 bp CTGGACCACCAGCAGTGTGAGCCCGCTGCCCCAGACGTAGTACATGTAGGCAGCTGCCGGGGGACAGGCTaGAGGAGACATTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LDHQQCEPAAPDVVHVGSCRGTG*RRHSPY
Trigger: GTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCA...GCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp TTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGTGCCGGGGGACAGGCTaGAGGAGACATTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: FWETRSLTMVVSEVRREMCRGTG*RRHSPY
Trigger: GTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCA...CATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGTGCCGGGGGACAGGCTaGAGGAGACATTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRCRGTG*RRHSPY
Trigger: GTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCA...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540285.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCATTCCAGGTGAGTGTGTaGCCCATGCGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPFQVSV*PMRQGL
Trigger: CAGGCCCTGCCGCATGGGTCACACACTCACCTGGAA...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTACCCGCGCTGCGCCGCTaGAAGGTCGGAGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLPALRR*KVGAET
Trigger: AGTCTCAGCTCCGACCTTGCAGCGGCGCAGCGCGGG...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTCTCCGCTCTTCCCGCTaGTCCTCCCCGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAILRSSR*SSPPPT
Trigger: GGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAG...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCTGCTCATTGAAGACTaGGCCGGACGCGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPLLIED*AGRGPR
Trigger: GCGAGGACCGCGTCCGGCGCAGTCTTCAATGAGCAG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGTGCAGTTTCCGCGCTaGTCATTGAAGACTGCGCCG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGVQFPR*SLKTAP
Trigger: CGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCAC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp GCCGTCACCTTGCCGGGGGACAGGCTGAAGGAGACATTCTCCATACAATCTCCCGGCTCGGGTCTGGGGTaGAGTTTCCGCGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: AVTLPGDRLKETFSIQSPGSGLG*SFRAAH
Trigger: ATGAGCAGCGCGGAAACTGCACCCCAGACCCGAGCC...GGGAGATTGTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGCGGTACAGGCAGGCTaGCCAGAGATCCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPAVQAG*PEIQHR
Trigger: TCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGTCCCGGATGGGCCTaGGCACCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPGPGWA*APLRRA
Trigger: TGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGCTCCAGGGCCTGGGTaGCTGGCCGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATAPGPG*LAARWT
Trigger: TGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATGCTCCAGGGCCTGGGTaGCTGGCCGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNAPGPG*LAARWT
Trigger: TGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGC...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCTGCGGCAAATGAGCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRLRQMS*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGCTCATTTGCCGCAG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCTTGTACACCTGCTaGAGCTTCCGCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGSLYTC*SFRRYT
Trigger: GGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATGCACCATGGTCGGCTaGCGGTCGATGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGCTMVG*RSMNSN
Trigger: GTTCGAGTTCATCGACCGGCAGCCGACCATGGTGCA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGTGCACCATGGTCGGCTaGCGGTCGATGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRCTMVG*RSMNSN
Trigger: GTTCGAGTTCATCGACCGGCAGCCGACCATGGTGCA...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGGTCGGGGGCCAAGCTaGCATCGTGCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKGRGPS*HRAPWS
Trigger: CGACCATGGTGCACGATGGCAGCTTGGCCCCCGACC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCTGAAGGAGACATTCTaGAGGACCTGGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRLKETF*RTWVWG
Trigger: GCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTGTGCTTCTGCAGGTTaGCATGGATGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGCASAG*HGWPAG
Trigger: TCCAGCAGGCCATCCATGGCAACCTGCAGAAGCACA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTGTGCTTCTGCAGGTTaGCATGGATGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGCASAG*HGWPAG
Trigger: TCCAGCAGGCCATCCATGGCAACCTGCAGAAGCACA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCAGCACCACAATGAGGTaGGCGTGCTCCACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSSTTMR*ACSTVL
Trigger: GAGCACCGTGGAGCACGCGCACCTCATTGTGGTGCT...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTGGTGGGTGCCCTGCTaGACTACGCGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKWWVPC*TTRPLS
Trigger: GGACAAGGGCCGCGTAGTGCAGCAGGGCACCCACCA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCCCCTGGGCCAGCAGCTaGTGGTGGGTGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATPWASS*WWVPCC
Trigger: GCAGCAGGGCACCCACCAGCAGCTGCTGGCCCAGGG...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATCAGGCCTTGTGACTaGCGTTGGCTACAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGIRPCD*RWLQAR
Trigger: ACGAGCCTGTAGCCAACGGCAGTCACAAGGCCTGAT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTACTCCGTGGGCACATCTaGCAGGCAGGCACCGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLLRGHI*QAGTGS
Trigger: GGACCCGGTGCCTGCCTGGCAGATGTGCCCACGGAG...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGTCGTCTTTCAGTGCTaGAGGCCTGGGCTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPVVFQC*RPGLGG
Trigger: CCCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGAC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGCCAGATCCTGGGCTTTaGCACCATCCCATCCACCAA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGPDPGL*HHPIHQ
Trigger: TTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGG...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCGCCGCCCCGAATACCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GLHHHLERHSGQAVGDVIAAPNT*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGGTATTCGGGGCGGC...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp ACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGTCTCCTGCCCCCGCATTaGCCACCACCCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: TARAPGSPGRSHGASTCGLLPPH*PPPCDS
Trigger: TGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAG...ACCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp GCCGTCACCTTGCCGGGGGACAGGCTGAAGGAGACATTCTCCATACAATCTCCCCTCCTGCCCCCGCATTaGCCACCACCCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: AVTLPGDRLKETFSIQSPLLPPH*PPPCDS
Trigger: TGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAG...GGGAGATTGTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGGGGCACCAGCCCCATaGCACGTTGCACGTATCAGC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPGAPAP*HVARIS
Trigger: GCTGATACGTGCAACGTGGCATGGGGCTGGTGCCCC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATCCCCGCAGCCTACTaGACTTCTTGGCTCAACGGT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGIPAAY*TSWLNG
Trigger: ACCGTTGAGCCAAGAAGTGCAGTAGGCTGCGGGGAT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACTGGCTCCGAGCCTCTaGTGTGCGCAACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPLAPSL*CAQQPL
Trigger: CAGAGGCTGTTGCGCACAGCAGAGGCTCGGAGCCAG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGACCTGGAGCTGGGCTaGCACTATGATAATGCCGAG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGDLELG*HYDNAE
Trigger: CTCGGCATTATCATAGTGGCAGCCCAGCTCCAGGTC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGCCTGCTGGTTGGAGGTaGGCGGGTGCTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKPAGWR*AGAEGQ
Trigger: CTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGG...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLATAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTCTTGGCCACACCAATaGTGGCTCCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHSWPHQ*WLPAAG
Trigger: GCCTGCTGCTGGGAGCCACCATTGGTGTGGCCAAGA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp CTCCGGACAGTCTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGTCTTGGCCACACCAATaGTGGCTCCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRTVFMALMVSSAVLLALSWPHQ*WLPAAG
Trigger: GCCTGCTGCTGGGAGCCACCATTGGTGTGGCCAAGA...CAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCTGCCTGGCCGCACGGTaGACAGCAGCCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLACLAAR*TAATRA
Trigger: TGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCA...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCATGCCTGGCCGCACGGTaGACAGCAGCCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPCLAAR*TAATRA
Trigger: TGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCA...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCCAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCCAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTCAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAIQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGACAGGGCCTGGGTGCCTaGCCGCACGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRQGLGA*PHGGQQ
Trigger: CTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTG...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGAGGCCACGTCGGGCTTaGTGTAGGAGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRRPRRA*CRRAAS
Trigger: AGAAGCTGCTCTCCTACACCAAGCCCGACGTGGCCT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCCGTGTTGCTCGCTCTaGCCAGGGCATTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHPCCSL*PGHSGP
Trigger: AGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCTCCTCCTCCTCATTaGCGAAGCTCCGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPPPPH*RSSGQS
Trigger: AGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTCTCGAAAGGCACAGTaGGCAGGCCGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGSRKAQ*AGRRRC
Trigger: ACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCTGCCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGTGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SASSSSLAKLRTVFMALMWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...CATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGCCGCTGCACCAGCTTaGCGTAGAGGCCGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRAAAPA*RRGRPG
Trigger: CCCAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGGC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCTACAGGCTCGTTGTaGCCAGCTGTGAAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRATGSL*PAVKSA
Trigger: CGCAGACTTCACAGCTGGCCACAACGAGCCTGTAGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCCTTGTGACTGCCGTTaGCTACAGGCTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRPCDCR*LQARCG
Trigger: GCCACAACGAGCCTGTAGCCAACGGCAGTCACAAGG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACCTTGTGACTGCCGTTaGCTACAGGCTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGPCDCR*LQARCG
Trigger: GCCACAACGAGCCTGTAGCCAACGGCAGTCACAAGG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAGGAGTGCCCTGGGAATaGGGCAGGGACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPGVPWE*GRDQGQ
Trigger: TTGCCCCTGGTCCCTGCCCCATTCCCAGGGCACTCC...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGAGAGGCCTAGTCTCTaGACATCCCCCAGGCTACTA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGERPSL*TSPRLL
Trigger: TAGTAGCCTGGGGGATGTCCAGAGACTAGGCCTCTC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGAGAGGCCTAGTCTCTaGACATCCCCCAGGCTACTA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGERPSL*TSPRLL
Trigger: TAGTAGCCTGGGGGATGTCCAGAGACTAGGCCTCTC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCCAGACTCACAGAGCTaGCAAGAGGGAGAGACGGAA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGPDSQS*QEGETE
Trigger: TTCCGTCTCTCCCTCTTGCCAGCTCTGTGAGTCTGG...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGCTCCCTACCCGCCCTaGCCAGACTCACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKAPYPP*PDSQSW
Trigger: CCAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGAGACTGGCTTAGATTaGCAGCGGGCGATGGCAGAC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRETGLD*QRAMAD
Trigger: GTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGGCAAAGCCAGATCCTaGGCTTTGCCACCATCCCAT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGGKARS*ALPPSH
Trigger: ATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCCCATCTGCTGGGCGATaGGGGCTCTGGCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAPSAGR*GLWPPG
Trigger: TCCAGGTGGCCAGAGCCCCCATCGCCCAGCAGATGG...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp ATGAAGGCGATGAGGTTGCCGCTGGTCATCTGGCCTGAGATGACAAGGTGGCCCTCAGCATCCATCTGCTaGGCGATGGGGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MKAMRLPLVIWPEMTRWPSASIC*AMGALA
Trigger: GGCCAGAGCCCCCATCGCCCAGCAGATGGATGCTGA...GGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp TCCTCCGCCGTGTTGCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCCATGTTGGCCAGGCTaGTCTGCAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SSAVLLALARAFWTSLESPCWPG*SATPDL
Trigger: GAGGTCAGGAGTTGCAGACCAGCCTGGCCAACATGG...GCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCCCAGTGGACTCGGGTaGGCCACCAGTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSPSGLG*ATSSIF
Trigger: GAAGATGCTACTGGTGGCCCACCCGAGTCCACTGGG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAACGTCCAGCCTCAGCTaGCCCCACGGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPTSSLS*PHGELQ
Trigger: CTGGAGCTCTCCGTGGGGCCAGCTGAGGCTGGACGT...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGAGGTGGAGCACGTGGTaGGCCAGGGTGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKRWSTW*ARVSST
Trigger: GGTGGAGGACACCCTGGCCCACCACGTGCTCCACCT...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGCCAGGACCTGGAGCTaGGCTGCCACTATGATAATG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGARTWS*AATMIM
Trigger: CATTATCATAGTGGCAGCCCAGCTCCAGGTCCTGGC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGATTACCTGGCACCAGGTaGGCTCTGGGAGGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRLPGTR*ALGGGA
Trigger: CGCGCCCCCTCCCAGAGCTCACCTGGTGCCAGGTAA...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCCCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACCAGAGCTGCCACGATaGGGAAGAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPPELPR*GRRRRP
Trigger: TGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CGCTCCTGCCCCCGCATTGCCCACCACCCTGTGACTCACCAGATACTCGCTCTCCCATGCTTTTCTGGATaGCGATGCCATCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: RSCPRIAHHPVTHQILALPCFSG*RCHQWR
Trigger: GCGCCATTGATGGCATCGTCATCCAGAAAAGCATGG...GAGAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAATACCTGCGGCAAATaGGCTGCCAATGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGNTCGK*AANGQQ
Trigger: CTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGAATACCTGCGGCAAATaGGCTGCCAATGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRNTCGK*AANGQQ
Trigger: CTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCTCCTGGGACACCAGTaGGCGGAAGAGACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSLLGHQ*AEETVS
Trigger: CGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCTCCTGGGACACCAGTaGGCGGAAGAGACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHLLGHQ*AEETVS
Trigger: CGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAGGTCAGGCGGGAGATaGGGTCCCCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPRSGGR*GPLCGS
Trigger: AGAACCGCACAGGGGACCTCATCTCCCGCCTGACCT...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRRRCYP*WSGRTA
Trigger: TGCTGTTCGCCCGCTCCATCACGGATAACATCTCCT...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGRRCYP*WSGRTA
Trigger: TGCTGTTCGCCCGCTCCATCACGGATAACATCTCCT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCAAGTCTGCGGCGGGCTaGAGCCCCAGCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATKSAAG*SPSICR
Trigger: GCGGCAGATGCTGGGGCTTCAGCCCGCCGCAGACTT...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACCCCATCAGGCCTTGTaGCTGCCGTTGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPPHQAL*LPLATG
Trigger: GCCTGTAGCCAACGGCAGTCACAAGGCCTGATGGGG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGACCTCACTCCCCCAGTTaGGGTTTCGTGTGGTTCACA +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGPHSPS*GFVWFT
Trigger: TGTGAACCACACGAAACCTCAACTGGGGGAGTGAGG...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACTGCAAGGTCGGAGCTaGGACTGGCGTGCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPLQGRS*DWRALR
Trigger: TCTCAACGCACGCCAGTCTCAGCTCCGACCTTGCAG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGACGTACAGGGCTGGATaGTTGAAGCACCAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRTYRAG*LKHQRE
Trigger: TTCCCGCTGGTGCTTCAATCATCCAGCCCTGTACGT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR TCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCCCGAGATTGGATaGAGCGCACAGCCACGCTTT +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPGPEIG*SAQPRF
Trigger: AAAGCGTGGCTGTGCGCTTCATCCAATCTCGGGCCC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGGGGCCAGAGAGGAGTaGATAACTTCCCAGACACTT +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGGAREE*ITSQTL
Trigger: AAGTGTCTGGGAAGTTATTCACTCCTCTCTGGCCCC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGCGGTACAGGCAGGCTaGCCAGAGATCCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKAVQAG*PEIQHR
Trigger: TCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTCACCATGGCATAGATaGCCACGAAGAGGCACACGA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGSPWHR*PRRGTR
Trigger: TCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAGGTCCCGGATGGGCCTaGGCACCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPGPGWA*APLRRA
Trigger: TGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACC...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGGCTCCAGGGCCTGGGTaGCTGGCCGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVAPGPG*LAARWT
Trigger: TGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGC...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCTGCGGCAAATGAGCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSLRQMS*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGCTCATTTGCCGCAG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCTGCGGCAAATGAGCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHLRQMS*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGCTCATTTGCCGCAG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKSPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTTCAGCTTGTACACCTaGTGCAGCTTCCGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGFSLYT*CSFRRY
Trigger: GTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTGCACCATGGTCGGCTaGCGGTCGATGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHCTMVG*RSMNSN
Trigger: GTTCGAGTTCATCGACCGGCAGCCGACCATGGTGCA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp ATGAAGGCGATGAGGTTGCCGCTGGTCATCTGGCCTGAGATGACAAGGTGGCCCGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 4 (lower is better)
Translates to: MKAMRLPLVIWPEMTRWPGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...GGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTTGCCATGGATGGCCTaGTGGATCAGATACTCGCTC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGLPWMA*WIRYSL
Trigger: GAGCGAGTATCTGATCCAGCAGGCCATCCATGGCAA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATGTGCTTCTGCAGGTTaGCATGGATGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGCASAG*HGWPAG
Trigger: TCCAGCAGGCCATCCATGGCAACCTGCAGAAGCACA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTAGCACCACAATGAGGTaGGCGTGCTCCACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPSTTMR*ACSTVL
Trigger: GAGCACCGTGGAGCACGCGCACCTCATTGTGGTGCT...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAAGCACCACAATGAGGTaGGCGTGCTCCACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPSTTMR*ACSTVL
Trigger: GAGCACCGTGGAGCACGCGCACCTCATTGTGGTGCT...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTATGCTGGTGGGTGCCCTaGTGCACTACGCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLCWWVP*CTTRPL
Trigger: CAAGGGCCGCGTAGTGCAGCAGGGCACCCACCAGCA...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCATGCTGGTGGGTGCCCTaGTGCACTACGCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPCWWVP*CTTRPL
Trigger: CAAGGGCCGCGTAGTGCAGCAGGGCACCCACCAGCA...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGCAGCTGCTGGTGGGTaGCCTGCTGCACTACGCGGC +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATAAAGG*PAALRG
Trigger: GCCGCGTAGTGCAGCAGGGCACCCACCAGCAGCTGC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAATCAGGCCTTGTGACTaGCGTTGGCTACAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGIRPCD*RWLQAR
Trigger: ACGAGCCTGTAGCCAACGGCAGTCACAAGGCCTGAT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGATCAGGCCTTGTGACTaGCGTTGGCTACAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRIRPCD*RWLQAR
Trigger: ACGAGCCTGTAGCCAACGGCAGTCACAAGGCCTGAT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGTCGTCTTTCAGTGCTaGAGGCCTGGGCTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKVVFQC*RPGLGG
Trigger: CCCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGAC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCAGGTCGTCTTTCAGTaGTGCAGGCCTGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPQVVFQ*CRPGLG
Trigger: TCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATAGCCCTGGGGTGCCGTaGTCCTCTTCATTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHSPGVP*SSSFSL
Trigger: GAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCT...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCAGCCCCATGCCACGTTaGACGTATCAGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSSPMPR*TYQLEQ
Trigger: CTGCTCCAGCTGATACGTGCAACGTGGCATGGGGCT...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCACAGTACCACAGTGTaGCCACACCACCGGTTACTG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRHSTTV*PHHRLL
Trigger: CAGTAACCGGTGGTGTGGGCACACTGTGGTACTGTG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACCCAGGCCTGAGTCGTaGCATCTGCAGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPPRPES*HLQAPT
Trigger: TGTGGGTGCCTGCAGATGGCACGACTCAGGCCTGGG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATCCAGCGCACTGTTCTTaGCCACACCAATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHPAHCS*PHQWWL
Trigger: GAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTGG...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGCAGCAGCTTCACCATaGCATAGATGCCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGAAASP*HRCPRR
Trigger: TCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTGCAGCTTCTGCAGCGTaGCCCCAGACGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAIAASAA*PQTPAR
Trigger: CCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGC...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATAGGCCACGTCGGGCTTaGTGTAGGAGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHRPRRA*CRRAAS
Trigger: AGAAGCTGCTCTCCTACACCAAGCCCGACGTGGCCT...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp CTGATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGCCGTGTTGCTCGCTCTaGCCAGGGCATTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: LIVWESSWGPSLLSIHLLPCCSL*PGHSGP
Trigger: AGGTCCAGAATGCCCTGGCCAGAGCGAGCAACACGG...CAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCCCTCCTCCTCCTCATTaGCGAAGCTCCGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGPPPPH*RSSGQS
Trigger: AGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGG...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGTTGCCGCTGGTCATCTaGCCTGAGATGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRLPLVI*PEMTRW
Trigger: CCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAA...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATTGCCGCTGGTCATCTaGCCTGAGATGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGLPLVI*PEMTRW
Trigger: CCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGTTGCCGCTGGTCATCTaGCCTGAGATGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FWETRSLTMVVSEVRREMLPLVI*PEMTRW
Trigger: CCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAA...CATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSNSTGS*LTREIT
Trigger: TGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATCTCGAAAGGCACAGTaGGCAGGCCGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGSRKAQ*AGRRRC
Trigger: ACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATGCCACCCGCTGCTTCTaGCCACCTGACAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNATRCF*PPDSWA
Trigger: CGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGC...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTTCTGCAGGTTGCCATaGATGGCCTGCTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGFCRLP*MACWIR
Trigger: TCTGATCCAGCAGGCCATCCATGGCAACCTGCAGAA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGAGCTGGGGGCCTCCGTaGGCACATCTGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALSWGPP*AHLPGR
Trigger: CCTGCCTGGCAGATGTGCCCACGGAGGCCCCCAGCT...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCTCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTCAGTGCTGCAGGCCTaGGCTCGGAGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGSVLQA*ARRAAG
Trigger: CCCAGCTGCCCTCCGAGCCCAGGCCTGCAGCACTGA...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGGTGATCCATGGGACATaGCAGGTCGTCTTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGVIHGT*QVVFQC
Trigger: GCACTGAAAGACGACCTGCCATGTCCCATGGATCAC...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGGAAGCGGTGATCCATaGGACATGGCAGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGGSGDP*DMAGRL
Trigger: AAGACGACCTGCCATGTCCCATGGATCACCGCTTCC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGAGAGGCCTAGTCTCTaGACATCCCCCAGGCTACTA +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRERPSL*TSPRLL
Trigger: TAGTAGCCTGGGGGATGTCCAGAGACTAGGCCTCTC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGCCAGCCAGGGGTGGGTaGACGAGGGGCGAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALPARGG*TRGESA
Trigger: AGCGCTTTCGCCCCTCGTCCACCCACCCCTGGCTGG...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGCTGCCAGCCAGGGGTaGGTGGACGAGGGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATAASQG*VDEGRK
Trigger: CTTTCGCCCCTCGTCCACCCACCCCTGGCTGGCAGC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGCTGCCAGCCAGGGGTaGGTGGACGAGGGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRAASQG*VDEGRK
Trigger: CTTTCGCCCCTCGTCCACCCACCCCTGGCTGGCAGC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGCAAAGCCAGATCCTaGGCTTTGCCACCATCCCAT +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRGKARS*ALPPSH
Trigger: ATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGGCAAAGCCAGATCCTaGGCTTTGCCACCATCCCAT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGGKARS*ALPPSH
Trigger: ATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGACATGTTGCAACCTCTaGCAAAGCCAGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGTCCNL*QSQILG
Trigger: GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACCGCAGACCGTTTCCTaGCGAGGTGCGTCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPPQTVS*RGASSS
Trigger: GGACGAAGACGCACCTCGCCAGGAAACGGTCTGCGG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGTTAAGTCAAAGGCCTTaGGGCTCCGAGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGLSQRP*GSESLP
Trigger: AGGAAGGGACTCGGAGCCCCAAGGCCTTTGACTTAA...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR CCA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCGTCCAGAGTGGCTCCTaGCTCCCCACTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: GLHHHLERHSGQAVGDVIVQSGS*LPTLNT
Trigger: GGTGTTGAGAGTGGGGAGCCAGGAGCCACTCTGGAC...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCTCCATCTCTGTTCTaGAAAGCCCCTCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRAPSLF*KAPQEA
Trigger: CGCTTCCTGAGGGGCTTTCCAGAACAGAGATGGAGC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGCCCGGGACGGAACCTaGGGCGTCAGAACGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLARDGT*GVRTKG
Trigger: GCCTTTCGTTCTGACGCCCCAGGTTCCGTCCCGGGC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGATGGAGCCCGGCCCTTaGGCACTGGTGAGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKMEPGP*ALVSVG
Trigger: TCCAACGCTCACCAGTGCCCAAGGGCCGGGCTCCAT...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCTCACCCTCAATGTaGCCTTGGGCAAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGSSPSM*PWARSS
Trigger: TGAAGACCTTGCCCAAGGCCACATTGAGGGTGAGCT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGTTCCGCGCTGCTCATTaGAGACTGCGCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALFRAAH*RLRRTR
Trigger: CCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAA...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR TCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTTTCCGCGCTGCTCATTaGAGACTGCGCCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAIFRAAH*RLRRTR
Trigger: CCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAA...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGAGGTGGGCGGGTGCTaGAGGCCAGGTTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPEVGGC*RPGCSS
Trigger: TGAGCTACAACCTGGCCTTCAGCACCCGCCCACCTC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTGCGGTCCAGGTGGCTaGAGACATAGATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKCGPGG*RHRWPW
Trigger: CCACGGCCATCTATGTCTTCAGCCACCTGGACCGCA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGGGCCTGCGCACCTCTaGGAAGAGCAGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLGPAHL*EEQQLH
Trigger: GTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGCCATGCTTTTCTGGATaGCGATGCCATCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRPCFSG*RCHQWR
Trigger: GCGCCATTGATGGCATCGTCATCCAGAAAAGCATGG...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGACAGCCGTGCTGAACTaGTCCATGCTTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGTAVLN*SMLFWM
Trigger: CATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACTCCTGGGACACCAGTaGGCGGAAGAGACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPLLGHQ*AEETVS
Trigger: CGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp ACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGTCTCCTGGGACACCAGTaGGCGGAAGAGACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: TARAPGSPGRSHGASTCGLLGHQ*AEETVS
Trigger: CGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAG...ACCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGGGACCACCAGCAGTGTaGGCCCGCTGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVGPPAV*ARCPRR
Trigger: ACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCC...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCATCATCTGGCCTGAGATaGCAAGGTGGCCCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPSSGLR*QGGPRS
Trigger: ACTACGGGGGCCACCTTGTCATCTCAGGCCAGATGA...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCAGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ARSGQGILDLFGEPLVVLAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...AAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCCGAGTGCGGTAGGTaGAGGTCACATTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGAECGR*RSHSQS
Trigger: ACTTTGAGAATGTGACCTTCACCTACCGCACTCGGC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR TCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGAGTTCTCCAGGATGTTaGCACAGGAGCTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRSSPGC*HRSSSH
Trigger: GTGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTCTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAILLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCATGTCCAGCACCACAATaGGGTGCGCGTGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPCPAPQ*GARAPR
Trigger: CCGTGGAGCACGCGCACCTCATTGTGGTGCTGGACA...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CTGATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGTTGCCCACCACCCTGTaGCTCACCAGATACTCGCTC +
Preference number: 4 (lower is better)
Translates to: LIVWESSWGPSLLSIHLLLPTTL*LTRYSL
Trigger: GAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAA...CAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp ATGAAGGCGATGAGGTTGCCGCTGGTCATCTGGCCTGAGATGACAAGGTGGCCCCTGGTCTGCAACTCCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: MKAMRLPLVIWPEMTRWPLVCNS*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGGAGTTGCAGACCAG...GGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GCCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGGTCCTGGTCTGCAACTCCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: ASSSSLAKLRTVFMALMVLVCNS*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGGAGTTGCAGACCAG...GACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGATTTTCCCGGGACGGTaGCGGGTACTGGGCGTCGCC +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALIFPGR*RVLGVA
Trigger: GGCGACGCCCAGTACCCGTCACCGTCCCGGGAAAAT...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAGTATGTGCGCTCACCTaGGCTTGCTTGGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPVCALT*ACLGPV
Trigger: CACTGGGCCCAAGCAAGCTCAGGTGAGCGCACATAC...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGTCCCATGTGCTGCCGTaGGCCCGACCTGGTGGACGA +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALSHVLP*ARPGGR
Trigger: TCGTCCACCAGGTCGGGCTCACGGCAGCACATGGGA...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTACTGCTCATTGAAGACTaGGCCGGACGCGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLLLIED*AGRGPR
Trigger: GCGAGGACCGCGTCCGGCGCAGTCTTCAATGAGCAG...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp GCCTCCTCCTCCTCATTGGCGAAGCTCCGGACAGTCTTCATGGCACTGATGGTCGTGCAGTTTCCGCGCTaGTCATTGAAGACTGCGCCG +
Preference number: 4 (lower is better)
Translates to: ASSSSLAKLRTVFMALMVVQFPR*SLKTAP
Trigger: CGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCAC...GACCATCAGTGCCATGAAGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGTGCAGTTTCCGCGCTaGTCATTGAAGACTGCGCCG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPVQFPR*SLKTAP
Trigger: CGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCAC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp TCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATCACCATGGCATAGATaGCCACGAAGAGGCACACGA +
Preference number: 4 (lower is better)
Translates to: SVRPPPPSRKAQWAGRRRSPWHR*PRRGTR
Trigger: TCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGA...TCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCTGCGGCAAATGAGCTaGCAATGGCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPLRQMS*QWPAGT
Trigger: TGTGCCTGCTGGCCATTGGCAGCTCATTTGCCGCAG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTATCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLSPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TTCTGGGAGACCAGGTCGCTGACCATGGTGGTGTCCGAGGTCAGGCGGGAGATGTTCAGCTTGTACACCTaGTGCAGCTTCCGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FWETRSLTMVVSEVRREMFSLYT*CSFRRY
Trigger: GTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAA...CATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CACCTGACAGCTGGGCGCCCTTCTCCCCTGTCTCTGTGCTGTAGCCGTCCTGGAGTACATGTAGGCAGCTaGCTCCTTCCTGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HLTAGRPSPLSLCCSRPGVHVGS*LLPVQL
Trigger: AAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTAC...TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp TGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCGATGGGGTACATGTAGGCAGCTaGCTCCTTCCTGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: WESSWGPSLLSIHLLGDGVHVGS*LLPVQL
Trigger: AAGCTGAACAGGAAGGAGGCAGCTGCCTACATGTAC...CCCATCGCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATGCCAAGCTGCCATCGTaGACCATGGTCGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNAKLPS*TMVGCR
Trigger: CCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGC...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGGTCGGGGGCCAAGCTaGCATCGTGCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRGRGPS*HRAPWS
Trigger: CGACCATGGTGCACGATGGCAGCTTGGCCCCCGACC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATGGTCGGGGGCCAAGCTaGCATCGTGCACCATGGTCG +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNGRGPS*HRAPWS
Trigger: CGACCATGGTGCACGATGGCAGCTTGGCCCCCGACC...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTCTCCCCTGTCTCTGTaGTGTAGCCGTCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSSPLSL*CSRPGV
Trigger: AACTCCAGGACGGCTACAGCACAGAGACAGGGGAGA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTCTCCCCTGTCTCTGTaGTGTAGCCGTCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHSPLSL*CSRPGV
Trigger: AACTCCAGGACGGCTACAGCACAGAGACAGGGGAGA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCTCTCCCCTGTCTCTGTaGTGTAGCCGTCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGSPLSL*CSRPGV
Trigger: AACTCCAGGACGGCTACAGCACAGAGACAGGGGAGA...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATGCCATGGCCACCCGCTaGTTCTGGCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNAMATR*FWPPDS
Trigger: GCTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGC...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGATGATGAGTACCGTGTaGTTCTGCAGGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGMMSTV*FCRLPW
Trigger: CCATGGCAACCTGCAGAAGCACACGGTACTCATCAT...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACGGTGCTCAGCCGGTaGGCGATGATGAGTACCGTG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKTVLSR*AMMSTV
Trigger: CACGGTACTCATCATCGCGCACCGGCTGAGCACCGT...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAACGGTGCTCAGCCGGTaGGCGATGATGAGTACCGTG +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPTVLSR*AMMSTV
Trigger: CACGGTACTCATCATCGCGCACCGGCTGAGCACCGT...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAACAATGAGGTGCGCGTaGTCCACGGTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLTMRCA*STVLSR
Trigger: CCGGCTGAGCACCGTGGAGCACGCGCACCTCATTGT...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCTGGTGGGTGCCCTGCTaGACTACGCGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATWWVPC*TTRPLS
Trigger: GGACAAGGGCCGCGTAGTGCAGCAGGGCACCCACCA...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTGGTGGGTGCCCTGCTaGACTACGCGGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGWWVPC*TTRPLS
Trigger: GGACAAGGGCCGCGTAGTGCAGCAGGGCACCCACCA...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGTGCTGGTGGGTGCCCTaGTGCACTACGCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALCWWVP*CTTRPL
Trigger: CAAGGGCCGCGTAGTGCAGCAGGGCACCCACCAGCA...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGGCAGCTGCTGGTGGGTaGCCTGCTGCACTACGCGGC +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVAAAGG*PAALRG
Trigger: GCCGCGTAGTGCAGCAGGGCACCCACCAGCAGCTGC...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAGGCACCGGGTCCTCTaGCCCACCGGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVRHRVL*PTGRSR
Trigger: CCTGCTTCTCCCGGTGGGGCAGAGGACCCGGTGCCT...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTGGCGAAAGCGCTGGGTaGCGGGCTGGGGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: PPSHPPKTEENASHEHPRGESAG*RAGGTP
Trigger: AGGGGTGCCCCCAGCCCGGCACCCAGCGCTTTCGCC...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CTGATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGTGACCAAGGAGAGCTaGCATGAGAGGCTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LIVWESSWGPSLLSIHLLVTKES*HERLCG
Trigger: ACCGCACAGCCTCTCATGGCAGCTCTCCTTGGTCAC...CAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426173.6
CDS-3UTR GCA 90 bp GAGAGGCTGAACATGAAGACCACCACGCCCGTGACCTTGACTGTGTTCCGCAGGTTCTCAGCATCCATCTaGTGGGCGATGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ERLNMKTTTPVTLTVFRRFSASI*WAMGAL
Trigger: CAGAGCCCCCATCGCCCAGCAGATGGATGCTGAGAA...CCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR GCA 90 bp CGCTCCTGCCCCCGCATTGCCCACCACCCTGTGACTCACCAGATACTCGCTCTCTCTGATGCCTTCTCTTaGCCCACACCATACAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSCPRIAHHPVTHQILALSDAFS*PTPYSS
Trigger: AGAGCTGTATGGTGTGGGGCAAGAGAAGGCATCAGA...GAGAGCGAGTATCTGGTGAGTCACAGGGTGGTGGGCAATGCGGGGGCAGGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGACACCTCGAGGAACTaGTCGGCCTCCACATCCCAA +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPDTSRN*SASTSQ
Trigger: TTGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTGGGGCAGCTGTGAGTaGCCAGGCCTGAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGWGSCE*PGLSRA
Trigger: GGCACGACTCAGGCCTGGGCACTCACAGCTGCCCCA...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGACAGCAGGCTCGGGTCTaGGGTGCAGTTTCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRQQARV*GAVSAL
Trigger: CAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTG...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR CCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATCAGCAGGCTCGGGTCTaGGGTGCAGTTTCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNQQARV*GAVSAL
Trigger: CAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTG...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATCCTGCTGGTTGGAGGTaGGCGGGTGCTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNPAGWR*AGAEGQ
Trigger: CTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGG...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALTAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGTAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRTAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAGACATAGATGGCCGTaGTCACGCAGATGTCCACAC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGRHRWP*SRRCPH
Trigger: GTGTGGACATCTGCGTGACCACGGCCATCTATGTCT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGGCATTGGCCTTCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAAGACATAGATGGCCGTaGTCACGCAGATGTCCACAC +
Preference number: 4 (lower is better)
Translates to: GHWPSVRPPPPSRKAQWARHRWP*SRRCPH
Trigger: GTGTGGACATCTGCGTGACCACGGCCATCTATGTCT...TGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCAGCAGCTTCACCATaGCATAGATGCCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGAAASP*HRCPRR
Trigger: TCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAACCAGGGGTCCCGGATaGGCCTGCGCACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRTRGPG*ACAPLR
Trigger: TCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGT...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCACCAGGGGTCCCGGATaGGCCTGCGCACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGTRGPG*ACAPLR
Trigger: TCTCAGAGGTGCGCAGGCCCATCCGGGACCCCTGGT...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGTGCCTGGCCGCACGGTaGACAGCAGCCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALCLAAR*TAATRA
Trigger: TGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCA...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTGCCTGGCCGCACGGTaGACAGCAGCCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGCLAAR*TAATRA
Trigger: TGCTCTGGTGGCTGCTGTCCACCGTGCGGCCAGGCA...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CTGATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGAGGCCACGTCGGGCTTaGTGTAGGAGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LIVWESSWGPSLLSIHLLRPRRA*CRRAAS
Trigger: AGAAGCTGCTCTCCTACACCAAGCCCGACGTGGCCT...CAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp ACAGCACGGGCTCCTGGCTCACCAGGGAGATCACACGGTGCAAGTACTTGTGGTAGGCCACGTCGGGCTTaGTGTAGGAGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TARAPGSPGRSHGASTCGRPRRA*CRRAAS
Trigger: AGAAGCTGCTCTCCTACACCAAGCCCGACGTGGCCT...ACCACAAGTACTTGCACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAAGAAGCTTGTCTCCTaGGACACCAGTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGKKLVS*DTSERK
Trigger: CTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAAGACATTGATGTTCTaGGAGACCAGGTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGKTLMF*ETRSLT
Trigger: GGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTT...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCCTCCTCCTCCTCATTaGCGAAGCTCCGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPPPPPH*RSSGQS
Trigger: AGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACCTCCTCCTCCTCATTaGCGAAGCTCCGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPPPPPH*RSSGQS
Trigger: AGACTGTCCGGAGCTTCGCCAATGAGGAGGAGGAGG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTTGCCGCTGGTCATCTaGCCTGAGATGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHLPLVI*PEMTRW
Trigger: CCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPNSTGS*LTREIT
Trigger: TGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCCGTCACCTTGCCGGGGGACAGGCTGAAGGAGACATTCTCCATACAATCTCCCAACAGCACGGGCTCCTaGCTCACCAGGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: AVTLPGDRLKETFSIQSPNSTGS*LTREIT
Trigger: TGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTT...GGGAGATTGTATGGAGAATGTCTCCTTCAGCCTGTCCCCCGGCAAGGTGACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATTCTCGAAAGGCACAGTaGGCAGGCCGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHSRKAQ*AGRRRC
Trigger: ACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGA...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGATGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCTGGCCACCTGACAGCTaGGCGCCCTTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATWPPDS*APFSPV
Trigger: GACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCA...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAGCAGGTTGCCATGGATaGCCTGCTGGATCAGATACT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGAGCHG*PAGSDT
Trigger: AGTATCTGATCCAGCAGGCCATCCATGGCAACCTGC...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGCAGGTTGCCATGGATaGCCTGCTGGATCAGATACT +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRAGCHG*PAGSDT
Trigger: AGTATCTGATCCAGCAGGCCATCCATGGCAACCTGC...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGGCAGGTTGCCATGGATaGCCTGCTGGATCAGATACT +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRAGCHG*PAGSDT
Trigger: AGTATCTGATCCAGCAGGCCATCCATGGCAACCTGC...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGCTACAGGCTCGTTGTaGCCAGCTGTGAAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPATGSL*PAVKSA
Trigger: CGCAGACTTCACAGCTGGCCACAACGAGCCTGTAGC...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCACCTTGTGACTGCCGTTaGCTACAGGCTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPPCDCR*LQARCG
Trigger: GCCACAACGAGCCTGTAGCCAACGGCAGTCACAAGG...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTCCTTGTGACTGCCGTTaGCTACAGGCTCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPPCDCR*LQARCG
Trigger: GCCACAACGAGCCTGTAGCCAACGGCAGTCACAAGG...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGCTCCCTACCCGCCCTaGCCAGACTCACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRAPYPP*PDSQSW
Trigger: CCAGCTCTGTGAGTCTGGCCAGGGCGGGTAGGGAGC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGATTGGCAGCGGGCGATaGCAGACAGATGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKIGSGR*QTDALH
Trigger: GTGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAAT...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGAGACTGGCTTAGATTaGCAGCGGGCGATGGCAGAC +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPETGLD*QRAMAD
Trigger: GTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGGCTGCCAGCCAGGGGTaGGTGGACGAGGGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVAASQG*VDEGRK
Trigger: CTTTCGCCCCTCGTCCACCCACCCCTGGCTGGCAGC...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGCAAAGCCAGATCCTaGGCTTTGCCACCATCCCAT +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSGKARS*ALPPSH
Trigger: ATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGAACATGTTGCAACCTCTaGCAAAGCCAGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGTCCNL*QSQILG
Trigger: GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGT...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTGGGCTCGGAGGACATGTTGCAACCTCTaGCAAAGCCAGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPWDMAGRLSVLQAWARRTCCNL*QSQILG
Trigger: GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGT...CCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCGCAGACCGTTTCCTaGCGAGGTGCGTCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPPQTVS*RGASSS
Trigger: GGACGAAGACGCACCTCGCCAGGAAACGGTCTGCGG...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR CCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCATGTCCTCAGCTCGGCTaGTTCTCCACGAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPCPQLG*FSTSSG
Trigger: CCCGGAGCTCGTGGAGAACCAGCCGAGCTGAGGACA...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGCAGTTCCCAGGGGTTTaGAGCCGGGTGCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALQFPGV*SRVRRR
Trigger: ACGCCTGCGCACCCGGCTCCAAACCCCTGGGAACTG...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTATGGCAGAGGGGTGAATaGCAGGGCCAGGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLWQRGE*QGQEPG
Trigger: GCCTGGTTCCTGGCCCTGCCATTCACCCCTCTGCCA...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp CACAGTGAGACTGGCTTAGATTGGCAGCGGGCGATGGCAGACAGATGCCCTCCAGTCAGAAGCAGGGTCTaGAATGGGGCTTCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: HSETGLDWQRAMADRCPPVRSRV*NGASAR
Trigger: CCTCGCTGAAGCCCCATTCCAGACCCTGCTTCTGAC...TGGAGGGCATCTGTCTGCCATCGCCCGCTGCCAATCTAAGCCAGTCTCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGCGGTGTGCCAGCTTCTaGGTCATTCTATGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRRCASF*VILWAK
Trigger: CTTTGCCCATAGAATGACCCAGAAGCTGGCACACCG...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGAGGGCTCCGTTGCCTTaGTCTGGGGGCAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRRAPLP*SGGRNK
Trigger: TTTATTTCTGCCCCCAGACCAAGGCAACGGAGCCCT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGGCCGTGAGCCCGACCTaGTGGACGATGAGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALAVSPT*WTMRAS
Trigger: CGAAGCCCTCATCGTCCACCAGGTCGGGCTCACGGC...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR TCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGAGGTGGGCGGGTGCTaGAGGCCAGGTTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGEVGGC*RPGCSS
Trigger: TGAGCTACAACCTGGCCTTCAGCACCCGCCCACCTC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTGAGGTGGGCGGGTGCTaGAGGCCAGGTTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAIEVGGC*RPGCSS
Trigger: TGAGCTACAACCTGGCCTTCAGCACCCGCCCACCTC...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGAGGTGGGCGGGTGCTaGAGGCCAGGTTGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKREVGGC*RPGCSS
Trigger: TGAGCTACAACCTGGCCTTCAGCACCCGCCCACCTC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GGGCATTGGCCTTCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAAGATGTCCACACTCATaGAGGCCAAAGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: GHWPSVRPPPPSRKAQWARCPHS*RPKSPP
Trigger: TGGTGGTGACTTTGGCCTTCATGAGTGTGGACATCT...TGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp GCTCGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTTGCGGTCCAGGTGGCTaGAGACATAGATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ARSGQGILDLFGEPLVVLCGPGG*RHRWPW
Trigger: CCACGGCCATCTATGTCTTCAGCCACCTGGACCGCA...AAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537276.5
CDS-3UTR TCA 90 bp CATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCATGCGGTCCAGGTGGCTaGAGACATAGATGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: HVATSGKARSWALPPSHPCGPGG*RHRWPW
Trigger: CCACGGCCATCTATGTCTTCAGCCACCTGGACCGCA...TGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCCGAGTCAAAGATGTTaGAGTGGCGGATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSPSQRC*SGGCPP
Trigger: TGGAGGACATCCGCCACTTCAACATCTTTGACTCGG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGGGGCCTGCGCACCTCTaGGAAGAGCAGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALGPAHL*EEQQLH
Trigger: GTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCC...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCGGGCCTGCGCACCTCTaGGAAGAGCAGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATGPAHL*EEQQLH
Trigger: GTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCC...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTGGGCCTGCGCACCTCTaGGAAGAGCAGCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAIGPAHL*EEQQLH
Trigger: GTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGCCC...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGAAGGATGCGCCGAGTaGAATGTACGTCCACACGAA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSEGCAE*NVRPHE
Trigger: TTCGTGTGGACGTACATTTCACTCGGCGCATCCTTC...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCCCATGCTTTTCTGGATaGCGATGCCATCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSPCFSG*RCHQWR
Trigger: GCGCCATTGATGGCATCGTCATCCAGAAAAGCATGG...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CTCCGGACAGTCTTCATGGCACTGATGGTCTCCTCCGCCGTGTTGCTCGCTCTGCCATGCTTTTCTGGATaGCGATGCCATCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: LRTVFMALMVSSAVLLALPCFSG*RCHQWR
Trigger: GCGCCATTGATGGCATCGTCATCCAGAAAAGCATGG...CAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACTCCTGGGACACCAGTaGGCGGAAGAGACAGTTTCG +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPLLGHQ*AEETVS
Trigger: CGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAAGGTCAGGCGGGAGATaGGGTCCCCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRRSGGR*GPLCGS
Trigger: AGAACCGCACAGGGGACCTCATCTCCCGCCTGACCT...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCCAGTCTTCATGGCACTaGTGGTCTCCTCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAQSSWH*WSPPPC
Trigger: ACACGGCGGAGGAGACCATCAGTGCCATGAAGACTG...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATGCTGGTCATCTGGCCTaGGATGACAAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNAGHLA*DDKVAP
Trigger: GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGC...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR TCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTATGCCGGGGGACAGGCTaGAGGAGACATTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLCRGTG*RRHSAG
Trigger: TCCTGCAGAATGTCTCCTTCAGCCTGTCCCCCGGCA...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR TCA 90 bp ATAGTCTGGGAGAGCTCCTGGGGCCCGTCTCTTCTCAGCATCCATCTGCTGGGCAGTTCTCCAGGATGTTaGCACAGGAGCTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: IVWESSWGPSLLSIHLLGSSPGC*HRSSSH
Trigger: GTGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACT...GCCCAGCAGATGGATGCTGAGAAGAGACGGGCCCCAGGAGCTCTCCCAGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCAGTTCTCCAGGATGTTaGCACAGGAGCTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSSSPGC*HRSSSH
Trigger: GTGGGAAGAGCTCCTGTGTCAACATCCTGGAGAACT...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGATGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCTGTGGTCGTAGGCGCTaGTGGGCTTGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATCGRRR*WACRPA
Trigger: TGCTGGACGGCAAGCCCATCAGCGCCTACGACCACA...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp CAGGAAGCGGTGATCCATGGGACATGGCAGGTCGTCTTTCAGTGCTGCAGGCCTAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: QEAVIHGTWQVVFQCCRPRRCYP*WSGRTA
Trigger: TGCTGTTCGCCCGCTCCATCACGGATAACATCTCCT...AGGCCTGCAGCACTGAAAGACGACCTGCCATGTCCCATGGATCACCGCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGTTATCAGGAGATGTTATCCGTaGTGGAGCGGGCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: GLHHHLERHSGQAVGDVIRRCYP*WSGRTA
Trigger: TGCTGTTCGCCCGCTCCATCACGGATAACATCTCCT...GATAACATCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR TCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGCTGCTTCTGGCCACCTaGCAGCTGGGCGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVLLLAT*QLGALL
Trigger: GAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAG...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCTGTCCAGCACCACAATaGGGTGCGCGTGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATCPAPQ*GARAPR
Trigger: CCGTGGAGCACGCGCACCTCATTGTGGTGCTGGACA...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGCGTTGTGGCCAGCTGTaGAGTCTGCGGCGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALRCGQL*SLRRAE
Trigger: TTCAGCCCGCCGCAGACTTCACAGCTGGCCACAACG...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTTGAAATCTAGGAGTTaGCTGGGGTGCCTCAAACCA +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGLKSRS*LGCLKP
Trigger: TGGTTTGAGGCACCCCAGTCAACTCCTAGATTTCAA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp TCCGTGAAGGCGTTGGCTCAGGGCAGCAGGGGTAAGGAGTGCCCTGGGAATGGGTCTAGAACATCTTGGTaGAAGTGCCCGCCATTACTC +
Preference number: 4 (lower is better)
Translates to: SVKALAQGSRGKECPGNGSRTSW*KCPPLL
Trigger: GAGTAATGGCGGGCACTTTCACCAAGATGTTCTAGA...CCCATTCCCAGGGCACTCCTTACCCCTGCTGCCCTGAGCCAACGCCTTCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR TCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCCCTCTCCCCGTCCTGTaGAGGCACGACCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATPLPVL*RHDPVQ
Trigger: CTGAACTGGGTCGTGCCTTCACAGGACGGGGAGAGG...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392439.7
ENST00000442028.6
CDS-3UTR GCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTCTCCGCTCTTCCCGCTaGTCCTCCCCGCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: PPSHPPKTEENASHEHPRLRSSR*SSPPPT
Trigger: GGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAG...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTCTGCTCATTGAAGACTaGGCCGGACGCGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAILLIED*AGRGPR
Trigger: GCGAGGACCGCGTCCGGCGCAGTCTTCAATGAGCAG...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGGTGCAGTTTCCGCGCTaGTCATTGAAGACTGCGCCG +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKVQFPR*SLKTAP
Trigger: CGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCAC...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGGCTCGGGTCTGGGGTaGAGTTTCCGCGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGGSGLG*SFRAAH
Trigger: ATGAGCAGCGCGGAAACTGCACCCCAGACCCGAGCC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR GCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGGCGGTACAGGCAGGCTaGCCAGAGATCCAGCACCGA +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALAVQAG*PEIQHR
Trigger: TCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGC...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CACAGAGCTGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCTCACCATGGCATAGATaGCCACGAAGAGGCACACGA +
Preference number: 4 (lower is better)
Translates to: HRAGKRERRKIPFPVSPSSPWHR*PRRGTR
Trigger: TCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGA...GGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCAGCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGGTCCCGGATGGGCCTaGGCACCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGGPGWA*APLRRA
Trigger: TGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATGGTCCCGGATGGGCCTaGGCACCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNGPGWA*APLRRA
Trigger: TGCTCTTCTCAGAGGTGCGCAGGCCCATCCGGGACC...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGGCCTCTTGTAGTACTTaGCGTAGATGTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: GKRERRKIPFPVSPSGTGASCST*RRCWTP
Trigger: TGGTGTCCAACATCTACGGCAAGTACTACAAGAGGC...CCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCTCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VLSTCCNLWQSQILGFATSPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...GGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTCTCCTCCGCCGTGTTaGTCGCTCTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNSPPPC*SLWPGH
Trigger: ATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGA...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR GCA 90 bp GCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGTGCACCATGGTCGGCTaGCGGTCGATGAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: ATSGKARSWALPPSHPPKCTMVG*RSMNSN
Trigger: GTTCGAGTTCATCGACCGGCAGCCGACCATGGTGCA...CTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGGCCAAGCTGCCATCGTaGACCATGGTCGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVAKLPS*TMVGCR
Trigger: CCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGC...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp GTTGCAACCTCTGGCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCACTGAAGGAGACATTCTaGAGGACCTGGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VATSGKARSWALPPSHPPLKETF*RTWVWG
Trigger: GCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAG...TGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGCCAGAGGTTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAGGCATTGGCCTTCTGTaGGGCCTCCACCACCATCTC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLGIGLL*GLHHHL
Trigger: GAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCC...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TGGCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGATGATGAGTACCGTGTaGTTCTGCAGGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: WQEGETENPVPRVSLRDRMMSTV*FCRLPW
Trigger: CCATGGCAACCTGCAGAAGCACACGGTACTCATCAT...CCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAACGGTGCTCAGCCGGTaGGCGATGATGAGTACCGTG +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLTVLSR*AMMSTV
Trigger: CACGGTACTCATCATCGCGCACCGGCTGAGCACCGT...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCACAATGAGGTGCGCGTaGTCCACGGTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGTMRCA*STVLSR
Trigger: CCGGCTGAGCACCGTGGAGCACGCGCACCTCATTGT...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp AGCCCCTCACTCCCCCAGTTGAGGTTTCGTGTGGTTCACAGTGAGACTGGCTTAAGCACCACAATGAGGTaGGCGTGCTCCACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SPSLPQLRFRVVHSETGLSTTMR*ACSTVL
Trigger: GAGCACCGTGGAGCACGCGCACCTCATTGTGGTGCT...TAAGCCAGTCTCACTGTGAACCACACGAAACCTCAACTGGGGGAGTGAGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGTGCTGGTGGGTGCCCTaGTGCACTACGCGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVCWWVP*CTTRPL
Trigger: CAAGGGCCGCGTAGTGCAGCAGGGCACCCACCAGCA...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp CCACCATCCCATCCACCAAAGACAGAAGAGAATGCATCTCATGAACATCCACGTCCCTGGGCCAGCAGCTaGTGGTGGGTGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPSHPPKTEENASHEHPRPWASS*WWVPCC
Trigger: GCAGCAGGGCACCCACCAGCAGCTGCTGGCCCAGGG...ACGTGGATGTTCATGAGATGCATTCTCTTCTGTCTTTGGTGGATGGGATGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp ATTGACCGGGTTCTCTCAACATGTTGCAACCTCTGGCAAAGCCAGATCCTGGGCGTCGTCTTTCAGTGCTaGAGGCCTGGGCTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: IDRVLSTCCNLWQSQILGVVFQC*RPGLGG
Trigger: CCCTCCGAGCCCAGGCCTGCAGCACTGAAAGACGAC...GCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR GCA 90 bp TCTGTGCGGCCTCCACCACCATCTCGAAAGGCACAGTGGGCAGGCCGTAGGAGATGCCATGAGAGGCTGTaGGGTTCTCATCAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SVRPPPPSRKAQWAGRRRCHERL*GSHQRS
Trigger: GCTTCTTTGATGAGAACCGCACAGCCTCTCATGGCA...TCTCCTACGGCCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426173.6
CDS-3UTR GCA 90 bp CGCTCTGGCCAGGGCATTCTGGACCTCTTTGGAGAGCCTCTTGTAGTACTTGCCTTCTCAGCATCCATCTaGTGGGCGATGGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSGQGILDLFGEPLVVLAFSASI*WAMGAL
Trigger: CAGAGCCCCCATCGCCCAGCAGATGGATGCTGAGAA...GGCAAGTACTACAAGAGGCTCTCCAAAGAGGTCCAGAATGCCCTGGCCAGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426173.6
ENST00000537276.5
CDS-3UTR GCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGCTTAACAGGCACCGCTaGGGGGACTGGAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVLNRHR*GDWSRR
Trigger: CCGCCGACTCCAGTCCCCGCAGCGGTGCCTGTTAAG...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR GCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATCATTGTGGAAGAGTTaGAACTTGGGGGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGSLWKS*NLGARD
Trigger: ATCTCGGGCCCCCAAGTTGCAACTCTTCCACAATGA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542678.5
CDS-3UTR CCA 90 bp GCAAAGCCAGATCCTGGGCTTTGCCACCATCCCATCCACCAAAGACAGAAGAGAGCCAGGCCTGTTACCTaGCACCAGGTGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AKPDPGLCHHPIHQRQKRARPVT*HQVSSG
Trigger: CCCAGAGCTCACCTGGTGCCAGGTAACAGGCCTGGC...TCTCTTCTGTCTTTGGTGGATGGGATGGTGGCAAAGCCCAGGATCTGGCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000540285.5
CDS-3UTR CCA 90 bp CCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATTGCCAGGCCTGTTACCTaGCACCAGGTGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PHLSLWPTVLFPKPSTAIARPVT*HQVSSG
Trigger: CCCAGAGCTCACCTGGTGCCAGGTAACAGGCCTGGC...AATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGCCTGCTGGTTGGAGGTaGGCGGGTGCTGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVPAGWR*AGAEGQ
Trigger: CTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGG...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp AAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGAAGGCGTTGCCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KKAALPLLRRLGRSVKALPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...CAACGCCTTCACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp TCCTCATCTGTCTCTCTGGCCAACTGTGCTGTTCCCAAAGCCCTCGACTGCAATCCGCATCCTGCTGGTTaGAGGTGGGCGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SSSVSLANCAVPKALDCNPHPAG*RWAGAE
Trigger: TTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGG...ATTGCAGTCGAGGGCTTTGGGAACAGCACAGTTGGCCAGAGAGACAGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp CCTAGGTTTAAAAAGGCAGCTCTACCTTTGCTTAGGAGGCTAGGGAGGTCCGTGACAGCCGCATCCTGCTaGTTGGAGGTGGGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: PRFKKAALPLLRRLGRSVTAASC*LEVGGC
Trigger: GCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGT...CACGGACCTCCCTAGCCTCCTAAGCAAAGGTAGAGCTGCCTTTTTAAACCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST00000542678.5
CDS-3UTR CCA 90 bp GCGCCAGGACTAAGCCAGCCCTGGGGTGCCGTGCTCCTCTTCATTCTCTCTCATAGACATAGATGGCCGTaGTCACGCAGATGTCCACAC +
Preference number: 4 (lower is better)
Translates to: APGLSQPWGAVLLFILSHRHRWP*SRRCPH
Trigger: GTGTGGACATCTGCGTGACCACGGCCATCTATGTCT...ATGAGAGAGAATGAAGAGGAGCACGGCACCCCAGGGCTGGCTTAGTCCTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442833.6
CDS-3UTR CCA 90 bp GCAAGAGGGAGAGACGGAAAATCCCGTTCCCCGTGTCTCCCTCCGGGACAGGGATCAAAGATGTTGAAGTaGCGGATGTCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARGRDGKSRSPCLPPGQGSKMLK*RMSSRR
Trigger: CCTCCTGGAGGACATCCGCCACTTCAACATCTTTGA...TCCCTGTCCCGGAGGGAGACACGGGGAACGGGATTTTCCGTCTCTCCCTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280560.13
ENST00000346530.9
ENST00000392439.7
ENST00000442028.6
ENST00000540285.5
ENST000005