RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCB11 (Homo sapiens)

Ensembl gene IDs: ENSG00000073734, ENSG00000276582

Ensembl transcript IDs: ENST00000439188.1, ENST00000618180.1, ENST00000647920.1, ENST00000648875.1, ENST00000649448.1, ENST00000650372.1

Found 605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTCACAGCTGCACCCACAGACCCTACCAGCATGTAGGGCCATTCTaGAGCACTGAATTTCAGAATCCTCCTAACTGGGGCAGGTTCAAC +
Preference number: 1 (lower is better)
Translates to: VHSCTHRPYQHVGPF*STEFQNPPNWGRFN
Trigger: GTTGAACCTGCCCCAGTTAGGAGGATTCTGAAATTCAGTGCTCCAGAATGGCCCTACATGCTGGTAGGGTCTGTGGGTGCAGCTGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 90 bp TCCTTGGAAGTCAATTCCCATGCAAGGAGGAGACACCAAAAAGCCTaGGGAAGCTCTGATCGAGTGGGTGCTTGTTGGTTGACAGGTGGG +
Preference number: 1 (lower is better)
Translates to: SLEVNSHARRRHQKA*GSSDRVGACWLTGG
Trigger: CCCACCTGTCAACCAACAAGCACCCACTCGATCAGAGCTTCCCCAGGCTTTTTGGTGTCTCCTCCTTGCATGGGAATTGACTTCCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 90 bp CTAGTGCTTTTGCCACATCCACTGCTCCCAACAAACGCCAGTGTCTaGCCTGGACTAATCGACACTGAGAGACCATTCAGAACTTGCGAG +
Preference number: 1 (lower is better)
Translates to: LVLLPHPLLPTNASV*PGLIDTERPFRTCE
Trigger: CTCGCAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGTTGGGAGCAGTGGATGTGGCAAAAGCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 90 bp TCTCCAGGGCCTGCTTATCTCGAGAGGCAAATCCTGTCAACATCCTaGTCTGTGTGGCTCCTGATAAAGCCAAGAAGGGGAAGAAGCACA +
Preference number: 1 (lower is better)
Translates to: SPGPAYLERQILSTS*SVWLLIKPRRGRST
Trigger: TGTGCTTCTTCCCCTTCTTGGCTTTATCAGGAGCCACACAGACCAGGATGTTGACAGGATTTGCCTCTCGAGATAAGCAGGCCCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 90 bp GAGGAAGCTGGAGTAGGGAGAAAACATGATGGCAGGATAGGTTGGTaGGAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGT +
Preference number: 1 (lower is better)
Translates to: EEAGVGRKHDGRIGW*EPWVQSCSQGFHFC
Trigger: ACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTCCCACCAACCTATCCTGCCATCATGTTTTCTCCCTACTCCAGCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR TCA 90 bp ACTGCTCCCAACAAACGCCAGTGTCTGCCCTGGACTAATCGACACTaGGAGACCATTCAGAACTTGCGAGTCAGGTCGAGAAGGATATGT +
Preference number: 1 (lower is better)
Translates to: TAPNKRQCLPWTNRH*ETIQNLRVRSRRIC
Trigger: ACATATCCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGTTGGGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR TCA 90 bp ACTCAGCACTTCTTGCACCATGGCTTCACTCTCATTGTCCAGAGCTaGGGTGGCCATGTCCAAAAGCAGAATCTTGGGATTTCGGATGAG +
Preference number: 1 (lower is better)
Translates to: TQHFLHHGFTLIVQS*GGHVQKQNLGISDE
Trigger: CTCATCCGAAATCCCAAGATTCTGCTTTTGGACATGGCCACCTCAGCTCTGGACAATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 90 bp ATCAACAGCCCTAACTGGAAAGCTCATGCTAATACTTTCCCTTTCTaGCTCCCTCAGCCTGAGAGCATCCACCCTTTCCCTATCCTTAGC +
Preference number: 1 (lower is better)
Translates to: INSPNWKAHANTFPF*LPQPESIHPFPILS
Trigger: GCTAAGGATAGGGAAAGGGTGGATGCTCTCAGGCTGAGGGAGGCAGAAAGGGAAAGTATTAGCATGAGCTTTCCAGTTAGGGCTGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618180.1
ENST00000650372.1
3UTR TCA 90 bp AATTCCCACATATTAATCAGGACTGGCTCCTGCACAGAGAAGCACTaGGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATA +
Preference number: 1 (lower is better)
Translates to: NSHILIRTGSCTEKH*VVAELPLDIGFSLI
Trigger: TATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCTTCTCTGTGCAGGAGCCAGTCCTGATTAATATGTGGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
3UTR CCA 90 bp CATGTAGGGCCATTCTGGAGCACTGAATTTCAGAATCCTCCTAACTaGGGCAGGTTCAACTTCTTCCTGCACAGGAATGTCCTTGTCCTT +
Preference number: 1 (lower is better)
Translates to: HVGPFWSTEFQNPPN*GRFNFFLHRNVLVL
Trigger: AAGGACAAGGACATTCCTGTGCAGGAAGAAGTTGAACCTGCCCCAGTTAGGAGGATTCTGAAATTCAGTGCTCCAGAATGGCCCTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR TCA 90 bp AATTTCACAGAAACTAAAAACAACAATCAGTATGCAGGGAGGTGCTaGGGAGTAAAAGGCCTGGGAGAGAGTCCCTGCTCCAGCCACACT +
Preference number: 1 (lower is better)
Translates to: NFTETKNNNQYAGRC*GVKGLGESPCSSHT
Trigger: AGTGTGGCTGGAGCAGGGACTCTCTCCCAGGCCTTTTACTCCTCAGCACCTCCCTGCATACTGATTGTTGTTTTTAGTTTCTGTGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR TCA 90 bp GAATTTCGTTTGTTGGCTAAGGGAAGAAAAACCATCTACGTAGAGTaGGCTTGGGAGGAAGCTGGAGTAGGGAGAAAACATGATGGCAGG +
Preference number: 1 (lower is better)
Translates to: EFRLLAKGRKTIYVE*AWEEAGVGRKHDGR
Trigger: CCTGCCATCATGTTTTCTCCCTACTCCAGCTTCCTCCCAAGCTCACTCTACGTAGATGGTTTTTCTTCCCTTAGCCAACAAACGAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 90 bp TTTTGCATAACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTaGACTCAGTACAACTGCAGAGATCACCCTGAACACATAGCTGAA +
Preference number: 1 (lower is better)
Translates to: FCITWGVREGSSKSC*TQYNCRDHPEHIAE
Trigger: TTCAGCTATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTATGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 90 bp AATGCTCCAGGGCTATTTCTGAGGTCATCAAACCAGGCAATATCTTaGCCCAGCATTGCCCTGAAACCAAATTTACGTAGCCTTTTTGTT +
Preference number: 1 (lower is better)
Translates to: NAPGLFLRSSNQAIS*PSIALKPNLRSLFV
Trigger: AACAAAAAGGCTACGTAAATTTGGTTTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTTTGATGACCTCAGAAATAGCCCTGGAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR TCA 90 bp GGAAACTGGCCACCTCCCAGCACAAGAGCCTATGCTCTTGCTCTTTaGAATGCAAACCAAAACAAGAGCTTTAGTCTTTCATCAAAATTA +
Preference number: 1 (lower is better)
Translates to: GNWPPPSTRAYALAL*NANQNKSFSLSSKL
Trigger: TAATTTTGATGAAAGACTAAAGCTCTTGTTTTGGTTTGCATTTCAAAGAGCAAGAGCATAGGCTCTTGTGCTGGGAGGTGGCCAGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 90 bp AGTGTCTGCCCTGGACTAATCGACACTGAGAGACCATTCAGAACTTaGGAGTCAGGTCGAGAAGGATATGTAAATTTACAATCAACAAAA +
Preference number: 1 (lower is better)
Translates to: SVCPGLIDTERPFRT*ESGREGYVNLQSTK
Trigger: TTTTGTTGATTGTAAATTTACATATCCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCAGGGCAGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 90 bp ATTATCAATTGTCCATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTaGCATCACTGTGTTTTCTTCATTCTTGTAGATTCCTGCCGCCTT +
Preference number: 1 (lower is better)
Translates to: IINCPFAFWLPRFCR*HHCVFFILVDSCRL
Trigger: AAGGCGGCAGGAATCTACAAGAATGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATGGACAATTGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR TCA 90 bp AAAGAGATACACAGCCCATTGCTACAAAAAGTAGGCACACACCATTaGTCTGTGACCTTTGTTCCTCTTTATCAGGAATTGAAAAAGTCC +
Preference number: 1 (lower is better)
Translates to: KEIHSPLLQKVGTHH*SVTFVPLYQELKKS
Trigger: GGACTTTTTCAATTCCTGATAAAGAGGAACAAAGGTCACAGATCAATGGTGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 90 bp AACTCTATTATCAATTGTCCATTTGCTTTCTGGCTCCCAAGATTTTaGAGGTGGCATCACTGTGTTTTCTTCATTCTTGTAGATTCCTGC +
Preference number: 1 (lower is better)
Translates to: NSIINCPFAFWLPRF*RWHHCVFFILVDSC
Trigger: GCAGGAATCTACAAGAATGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATGGACAATTGATAATAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR GCA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCACTGGGAGAGAGTCCCTaGTCCAGCCACACTGGTAGG +
Preference number: 2 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPLGESP*SSHTGR
Trigger: CCTACCAGTGTGGCTGGAGCAGGGACTCTCTCCCAG...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR GCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTAGGCAGCCATCCTGCTaGAGGCGGGGCTCTGCAATT +
Preference number: 2 (lower is better)
Translates to: VSLSANLPVSLLREGVCSRQPSC*RRGSAI
Trigger: AATTGCAGAGCCCCGCCTGCAGCAGGATGGCTGCCT...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR TCA 90 bp AGCCAAGAAGGGGAAGAAGCACAAGATGACCAGGCTCAGCTTCCAGCTAAAGGACAAGCGATGAGCAACTaGAATGATTGTGTGCCCATG +
Preference number: 2 (lower is better)
Translates to: SQEGEEAQDDQAQLPAKGQAMSN*NDCVPM
Trigger: CATGGGCACACAATCATTTCAGTTGCTCATCGCTTG...TCCTTTAGCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCCCCTTCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTAGGCATACAAGGGTGTaGCTGTCCCGTTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: KTTPVTGASCVSEILALGRHTRV*LSRSQL
Trigger: CAGCTGTGAACGGGACAGTCACACCCTTGTATGCCT...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCGTGCAAACCTCCCTGTaGGCCTCCTCAGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCVQTSL*ASSERE
Trigger: CTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCAC...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATAAGAAAGCTGAGACTTaGAGCGTTGCCGGATGGAAG +
Preference number: 2 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDKKAET*SVAGWK
Trigger: CTTCCATCCGGCAACGCTCCAAGTCTCAGCTTTCTT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp GGCAATGATCATGGCCACAGTGACGTTAGTGAAGGAATTGACTATCATCCCGATGCCCCAGCATTGCCCTaGAACCAAATTTACGTAGCC +
Preference number: 2 (lower is better)
Translates to: GNDHGHSDVSEGIDYHPDAPALP*NQIYVA
Trigger: GGCTACGTAAATTTGGTTTCAGGGCAATGCTGGGGC...ATCGGGATGATAGTCAATTCCTTCACTAACGTCACTGTGGCCATGATCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGTATGCAGGGAGGTGCTaGGGAGTAAAAGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLYAGRC*GVKGLG
Trigger: TCCCAGGCCTTTTACTCCTCAGCACCTCCCTGCATA...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR TCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCAGCCTGGGGAAGCTCTaGTCGAGTGGGTGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCSLGKL*SSGCLL
Trigger: CAACAAGCACCCACTCGATCAGAGCTTCCCCAGGCT...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR GCA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTAACCAGGCAATATCTTaGCCCAGCATTGCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: CVSEILALGQLMGDPVVTNQAIS*PSIALK
Trigger: TTTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTT...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATAGACCATTCAGAACTTaGGAGTCAGGTCGAGAAGGA +
Preference number: 2 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDRPFRT*ESGREG
Trigger: TCCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCATATCAATTGTCCATTTaGTTTCTGGCTCCCAAGATT +
Preference number: 2 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPYQLSI*FLAPKI
Trigger: AATCTTGGGAGCCAGAAAGCAAATGGACAATTGATA...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATCAGAATCCTCCTAACTaGGGCAGGTTCAACTTCTTC +
Preference number: 2 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDQNPPN*GRFNFF
Trigger: GAAGAAGTTGAACCTGCCCCAGTTAGGAGGATTCTG...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTCCAAGATTTTGCAGGTaGCATCACTGTGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: VSLSANLPVSLLREGVCSPRFCR*HHCVFF
Trigger: GAAGAAAACACAGTGATGCCACCTGCAAAATCTTGG...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR TCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATACCGTAGACAAGCGATaGGCAACTGAAATGATTGTG +
Preference number: 2 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDTVDKR*ATEMIV
Trigger: CACAATCATTTCAGTTGCTCATCGCTTGTCTACGGT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTAAACGTTCCAACAGCTaGATGCTAGTGCTTTTGCCA +
Preference number: 2 (lower is better)
Translates to: CVSEILALGQLMGDPVVTKRSNS*MLVLLP
Trigger: TGGCAAAAGCACTAGCATTCAGCTGTTGGAACGTTT...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTACCATCTCCAGGGCCTaGTTATCTCGAGAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: KTTPVTGASCVSEILALGTISRA*LSREAN
Trigger: ATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGT...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CCA 90 bp AGCCAAGAAGGGGAAGAAGCACAAGATGACCAGGCTCAGCTTCCAGCTAAAGGATGTCAAATTGCTAGATaGAAGGTGACACCAGTCATG +
Preference number: 2 (lower is better)
Translates to: SQEGEEAQDDQAQLPAKGCQIAR*KVTPVM
Trigger: CATGACTGGTGTCACCTTCCATCTAGCAATTTGACA...TCCTTTAGCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCCCCTTCTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp GCAAAGGCATATCCCTGTAGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTGGTCCCTCTTTCCACTaGAGTGCCATGTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: AKAYPCRNWVKRDTQPIAGPSFH*SAMFKT
Trigger: GGTTTTGAACATGGCACTGCAGTGGAAAGAGGGACC...AGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGGGATATGCCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp GGCAATGATCATGGCCACAGTGACGTTAGTGAAGGAATTGACTATCATCCCGATGGTTCAACTTCTTCCTaGACAGGAATGTCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: GNDHGHSDVSEGIDYHPDGSTSS*TGMSLS
Trigger: GGACAAGGACATTCCTGTGCAGGAAGAAGTTGAACC...ATCGGGATGATAGTCAATTCCTTCACTAACGTCACTGTGGCCATGATCATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAAATACTTTCCCTTTCTaGCTCCCTCAGCCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSNTFPF*LPQPES
Trigger: GCTCTCAGGCTGAGGGAGGCAGAAAGGGAAAGTATT...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR GCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCTCTTGTGTCTCTAAGTaGAAACCTCCCTGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: PEERGWEFFCSYTALHSISCVSK*KPPCEP
Trigger: AGGCTCACAGGGAGGTTTGCACTTAGAGACACAAGA...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CCA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTACATCCTGGTCTGTGTaGCTCCTGATAAAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: KTTPVTGASCVSEILALGTSWSV*LLIKPR
Trigger: TCTTGGCTTTATCAGGAGCCACACAGACCAGGATGT...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCTATGCAGTTTCTCGCTaGAACTGGGGAAAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCYAVSR*NWGKAA
Trigger: GGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATA...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR GCA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATAACCAATGATGGTATCTaGAGCTCTGACCGTAGACAA +
Preference number: 2 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHITNDGI*SSDRRQ
Trigger: TTGTCTACGGTCAGAGCTGCAGATACCATCATTGGT...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGAGTGGTGGCTGAGCTaGCACTTGACATTGGGTTTT +
Preference number: 2 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPEWWLS*HLTLGF
Trigger: AAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATATAAACATGATGCACTaGGCAAAGGCAAAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDINMMH*AKAKQN
Trigger: ATTCTGCTTTGCCTTTGCCCAGTGCATCATGTTTAT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCGTGTCACTTACTCCCTaGTGTCTCACTAATTCCCAC +
Preference number: 2 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCVSLTP*CLTNSH
Trigger: GTGGGAATTAGTGAGACATCAGGGAGTAAGTGACAC...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR GCA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATAAAGTCTTGTTGTCAATaGTCCAGGGCTATTTCTGAG +
Preference number: 2 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHIKSCCQ*SRAISE
Trigger: CTCAGAAATAGCCCTGGAGCATTGACAACAAGACTT...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR GCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCTGGCTCCCAAGATTTTaGAGGTGGCATCACTGTGTT +
Preference number: 2 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCWLPRF*RWHHCV
Trigger: AACACAGTGATGCCACCTGCAAAATCTTGGGAGCCA...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCATTCTATGTCATTCTGTaGTGTTTTGAGGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSFYVIL*CFEGAG
Trigger: CCCTGCTCCCTCAAAACACCACAGAATGACATAGAA...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR TCA 90 bp GGCAATGATCATGGCCACAGTGACGTTAGTGAAGGAATTGACTATCATCCCGATTCTTCATTAAGAGCTTaGTTTCCCTGGCTTTGCAAA +
Preference number: 2 (lower is better)
Translates to: GNDHGHSDVSEGIDYHPDSSLRA*FPWLCK
Trigger: TTTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGA...ATCGGGATGATAGTCAATTCCTTCACTAACGTCACTGTGGCCATGATCATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCACAGTTCTCTGCCCTTaGGGAGTTCAAAGTGTCACT +
Preference number: 2 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAATVLCP*GVQSVT
Trigger: AGTGACACTTTGAACTCCTCAAGGGCAGAGAACTGT...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR GCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAGCAGGGGCAAATGAGTaGTTTTCTGCCATATTTACT +
Preference number: 2 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSAGANE*FSAIFT
Trigger: AGTAAATATGGCAGAAAAGCACTCATTTGCCCCTGC...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CCA 90 bp CATGGGAATTTCTTTGGTGTTGTCTCCATACTTGATATTGTCCATTATGCTACAGCTACCCTTTGTTTCTaGCCACCACTCATCTGGCCT +
Preference number: 2 (lower is better)
Translates to: HGNFFGVVSILDIVHYATATLCF*PPLIWP
Trigger: AGGCCAGATGAGTGGTGGCCAGAAACAAAGGGTAGC...TGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CCA 90 bp AGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTACAAAAAGTAGGCACACAGCACTTCTTGCACCATaGCTTCACTCTCATTGTCCA +
Preference number: 2 (lower is better)
Translates to: RNWVKRDTQPIATKSRHTALLAP*LHSHCP
Trigger: TGGACAATGAGAGTGAAGCCATGGTGCAAGAAGTGC...TGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTCATATTAATCAGGACTaGCTCCTGCACAGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPHINQD*LLHREA
Trigger: TGCTTCTCTGTGCAGGAGCCAGTCCTGATTAATATG...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 90 bp ACTCTTTCCATGGGAATTTCTTTGGTGTTGTCTCCATACTTGATATaGTCCATTATGCTACAGGCAAACAACACTGGTTCCACCTTCCCT +
Preference number: 2 (lower is better)
Translates to: TLSMGISLVLSPYLI*SIMLQANNTGSTFP
Trigger: AGGGAAGGTGGAACCAGTGTTGTTTGCCTGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATGGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR TCA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTTGTTGTCTCCATACTTaGTATTGTCCATTATGCTAC +
Preference number: 2 (lower is better)
Translates to: KTTPVTGASCVSEILALGCCLHT*YCPLCY
Trigger: GTAGCATAATGGACAATATCAAGTATGGAGACAACA...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTGTCCATTTGCTTTCTaGCTCCCAAGATTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAACPFAF*LPRFCR
Trigger: CCTGCAAAATCTTGGGAGCCAGAAAGCAAATGGACA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR TCA 90 bp CATGGGAATTTCTTTGGTGTTGTCTCCATACTTGATATTGTCCATTATGCTACACAGTATTGTATACACTaGTTGGGGGTTGTCGGTCCA +
Preference number: 2 (lower is better)
Translates to: HGNFFGVVSILDIVHYATQYCIH*LGVVGP
Trigger: TGGACCGACAACCCCCAATCAGTGTATACAATACTG...TGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CAA 90 bp TTAATTTCCTCTAAAAGGCATCTTTACTCTGCAACTTACTCGTCATaGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: LISSKRHLYSATYSS*PFFITRMHSFTVCL
Trigger: GAGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGTTGCAGAGTAAAGATGCCTTTTAGAGGAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 90 bp ATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCCTATTGTaGCTTTTGCTTTATATGTTAAAATACTTCCTCAGTGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: IGSVTSNFLSPAALL*LLLYMLKYFLSVWW
Trigger: CCACCAGACACTGAGGAAGTATTTTAACATATAAAGCAAAAGCAACAATAGGGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp TTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTaGAGGCGGGGCTCTGCAATTCTGTTTCCATACAGG +
Preference number: 3 (lower is better)
Translates to: FLAGTGERQPSC*RRGSAILFPYR
Trigger: CCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp CAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTaGTGCAGGCGGGGCTCTGCAATTCTGTTTCCATAC +
Preference number: 3 (lower is better)
Translates to: QFLAGTGERQPS*CRRGSAILFPY
Trigger: GTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp GCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATaGAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCAT +
Preference number: 3 (lower is better)
Translates to: ANLPVSLLREGV*SFSLELGKGSH
Trigger: ATGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp AAAGGCATACAAGGGTGTGACTGTCCCGTTCACAGCTaGACCCACAGACCCTACCAGCATGTAGGGCCATTC +
Preference number: 3 (lower is better)
Translates to: KGIQGCDCPVHS*THRPYQHVGPF
Trigger: GAATGGCCCTACATGCTGGTAGGGTCTGTGGGTGCAGCTGTGAACGGGACAGTCACACCCTTGTATGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CAA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCTTATCAATTGTCCATTaGCTTTCTGGCTCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCLSIVH*LSGSQD
Trigger: ATCTTGGGAGCCAGAAAGCAAATGGACAATTGATAA...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp CCTCAGTGTCTGGTGGTCCTTGGAAGTCAATTCCCATaGAAGGAGGAGACACCAAAAAGCCTGGGGAAGCTC +
Preference number: 3 (lower is better)
Translates to: PQCLVVLGSQFP*KEETPKSLGKL
Trigger: GAGCTTCCCCAGGCTTTTTGGTGTCTCCTCCTTGCATGGGAATTGACTTCCAAGGACCACCAGACACTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CCA 72 bp TGCACCCACAGACCCTACCAGCATGTAGGGCCATTCTaGAGCACTGAATTTCAGAATCCTCCTAACTGGGGC +
Preference number: 3 (lower is better)
Translates to: CTHRPYQHVGPF*STEFQNPPNWG
Trigger: GCCCCAGTTAGGAGGATTCTGAAATTCAGTGCTCCAGAATGGCCCTACATGCTGGTAGGGTCTGTGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 72 bp GGAGTAGGGAGAAAACATGATGGCAGGATAGGTTGGTaGGAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTT +
Preference number: 3 (lower is better)
Translates to: GVGRKHDGRIGW*EPWVQSCSQGF
Trigger: AAAACCTTGGGAGCAGGACTGCACCCACGGTTCCCACCAACCTATCCTGCCATCATGTTTTCTCCCTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp TTGCCACATCCACTGCTCCCAACAAACGCCAGTGTCTaGCCTGGACTAATCGACACTGAGAGACCATTCAGA +
Preference number: 3 (lower is better)
Translates to: LPHPLLPTNASV*PGLIDTERPFR
Trigger: TCTGAATGGTCTCTCAGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGTTGGGAGCAGTGGATGTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 72 bp GCCCATGCTGAATCTTACTCAGCACTTCTTGCACCATaGCTTCACTCTCATTGTCCAGAGCTGAGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: AHAESYSALLAP*LHSHCPELRWP
Trigger: TGGCCACCTCAGCTCTGGACAATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 72 bp AAAGCCTGGGGAAGCTCTGATCGAGTGGGTGCTTGTTaGTTGACAGGTGGGCTTCATAGAAGGGTAATACGG +
Preference number: 3 (lower is better)
Translates to: KAWGSSDRVGAC*LTGGLHRRVIR
Trigger: CCGTATTACCCTTCTATGAAGCCCACCTGTCAACCAACAAGCACCCACTCGATCAGAGCTTCCCCAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CCA 72 bp GTCAATTCCCATGCAAGGAGGAGACACCAAAAAGCCTaGGGAAGCTCTGATCGAGTGGGTGCTTGTTGGTTG +
Preference number: 3 (lower is better)
Translates to: VNSHARRRHQKA*GSSDRVGACWL
Trigger: CAACCAACAAGCACCCACTCGATCAGAGCTTCCCCAGGCTTTTTGGTGTCTCCTCCTTGCATGGGAATTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTCTGGCTCCCAAGATTTaGCAGGTGGCATCACTGTGT +
Preference number: 3 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSLAPKI*QVASLC
Trigger: ACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAG...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp CCCTCTTTCCACTGCAGTGCCATGTTCAAAACCAATGATGGTATCTGCAGCTCTATGGCTTCACTCTCATaGTCCAGAGCTGAGGTGGCC +
Preference number: 3 (lower is better)
Translates to: PSFHCSAMFKTNDGICSSMASLS*SRAEVA
Trigger: GGCCACCTCAGCTCTGGACAATGAGAGTGAAGCCAT...AGAGCTGCAGATACCATCATTGGTTTTGAACATGGCACTGCAGTGGAAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CAA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATAGCTGCCACTTGACATaGGGTTTTCCCTCATATGGA +
Preference number: 3 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHSCHLT*GFPSYG
Trigger: TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTTCATTCTGTGGTGTTTaGAGGGAGCAGGGGCAAATG +
Preference number: 3 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSSFCGV*REQGQM
Trigger: CATTTGCCCCTGCTCCCTCAAAACACCACAGAATGA...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR TCA 72 bp AACAAACGCCAGTGTCTGCCCTGGACTAATCGACACTaGGAGACCATTCAGAACTTGCGAGTCAGGTCGAGA +
Preference number: 3 (lower is better)
Translates to: NKRQCLPWTNRH*ETIQNLRVRSR
Trigger: TCTCGACCTGACTCGCAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 72 bp TTAGCTGCCCCTTCAACTTCATCTTGTGTCTCTAAGTaGAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGT +
Preference number: 3 (lower is better)
Translates to: LAAPSTSSCVSK*KPPCEPPQRGS
Trigger: ACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACACAAGATGAAGTTGAAGGGGCAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp GAAGTTGTCCCATTTTTCACCTGCAGTATTGTATACACTGATTGGGGGTTGTCGAGAGCCGGCAGCCCCTaGAACTTGGGAAGCATCTGT +
Preference number: 3 (lower is better)
Translates to: EVVPFFTCSIVYTDWGLSRAGSP*NLGSIC
Trigger: ACAGATGCTTCCCAAGTTCAAGGGGCTGCCGGCTCT...CGACAACCCCCAATCAGTGTATACAATACTGCAGGTGAAAAATGGGACAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR TCA 72 bp ATATTAATCAGGACTGGCTCCTGCACAGAGAAGCACTaGGTGGTGGCTGAGCTGCCACTTGACATTGGGTTT +
Preference number: 3 (lower is better)
Translates to: ILIRTGSCTEKH*VVAELPLDIGF
Trigger: AAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCTTCTCTGTGCAGGAGCCAGTCCTGATTAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
3UTR TCA 72 bp GAAACTAAAAACAACAATCAGTATGCAGGGAGGTGCTaGGGAGTAAAAGGCCTGGGAGAGAGTCCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: ETKNNNQYAGRC*GVKGLGESPCS
Trigger: GGAGCAGGGACTCTCTCCCAGGCCTTTTACTCCTCAGCACCTCCCTGCATACTGATTGTTGTTTTTAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp GCTTCATTTGTAATCTGTCCCACCATCTCCAGGGCCTaGTTATCTCGAGAGGCAAATCCTGTCAACATCCTG +
Preference number: 3 (lower is better)
Translates to: ASFVICPTISRA*LSREANPVNIL
Trigger: CAGGATGTTGACAGGATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGTGGGACAGATTACAAATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 72 bp ACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTaGACTCAGTACAACTGCAGAGATCACCCTGAACAC +
Preference number: 3 (lower is better)
Translates to: TWGVREGSSKSC*TQYNCRDHPEH
Trigger: GTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 72 bp ACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTaGACTCAGTACAACTGCAGAGATCACCCTCCAAAC +
Preference number: 3 (lower is better)
Translates to: TWGVREGSSKSC*TQYNCRDHPPN
Trigger: GTTTGGAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647920.1
3UTR-3UTR CAA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTGGCGATAGCTACCCTTaGTTTCTGGCCACCACTCAT +
Preference number: 3 (lower is better)
Translates to: KTTPVTGASCVSEILALGGDSYP*FLATTH
Trigger: ATGAGTGGTGGCCAGAAACAAAGGGTAGCTATCGCC...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CAA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTAGTAGGCACACACCATaGATCTGTGACCTTTGTTCC +
Preference number: 3 (lower is better)
Translates to: CVSEILALGQLMGDPVVTSRHTP*ICDLCS
Trigger: GGAACAAAGGTCACAGATCAATGGTGTGTGCCTACT...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CAA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCTGGCTGAGCTGCCACTaGACATTGGGTTTTCCCTCA +
Preference number: 3 (lower is better)
Translates to: PEERGWEFFCSYTALHSIWLSCH*TLGFPS
Trigger: TGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCA...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CCA 72 bp CCATTCTGGAGCACTGAATTTCAGAATCCTCCTAACTaGGGCAGGTTCAACTTCTTCCTGCACAGGAATGTC +
Preference number: 3 (lower is better)
Translates to: PFWSTEFQNPPN*GRFNFFLHRNV
Trigger: GACATTCCTGTGCAGGAAGAAGTTGAACCTGCCCCAGTTAGGAGGATTCTGAAATTCAGTGCTCCAGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CAA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTCAAGAAACGTTTGTaGATTGCCTGTTATAGACCC +
Preference number: 3 (lower is better)
Translates to: AAGGALQFCFHTGFWSILLKKRL*IACYRP
Trigger: GGGTCTATAACAGGCAATCAACAAACGTTTCTTGAG...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATATCCAAAAGCAGAATCTaGGGATTTCGGATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHISKSRI*GFRMRA
Trigger: AGCCCTCATCCGAAATCCCAAGATTCTGCTTTTGGA...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 72 bp GGGCTATTTCTGAGGTCATCAAACCAGGCAATATCTTaGCCCAGCATTGCCCTGAAACCAAATTTACGTAGC +
Preference number: 3 (lower is better)
Translates to: GLFLRSSNQAIS*PSIALKPNLRS
Trigger: GCTACGTAAATTTGGTTTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTTTGATGACCTCAGAAATAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR GCA 72 bp CCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTaGCTCCTGACTTGGCAACCATCAAGAATTCTGGCC +
Preference number: 3 (lower is better)
Translates to: PFFITRMHSFTV*LLTWQPSRILA
Trigger: GGCCAGAATTCTTGATGGTTGCCAAGTCAGGAGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATAATTTACGTAGCCTTTTaGTTAGGAGCTCCCCAGATT +
Preference number: 3 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHIIYVAF*LGAPQI
Trigger: AATCTGGGGAGCTCCTAACAAAAAGGCTACGTAAAT...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR TCA 72 bp CATCAAACCAGGCAATATCTTGCCCCAGCATTGCCCTaGAACCAAATTTACGTAGCCTTTTTGTTAGGAGCT +
Preference number: 3 (lower is better)
Translates to: HQTRQYLAPALP*NQIYVAFLLGA
Trigger: AGCTCCTAACAAAAAGGCTACGTAAATTTGGTTTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR TCA 72 bp AGAATCCGTAAATATTGGCTTTCTGAATGGCTGTCTTaGAGGGCTTCTCCAGCTCAGTCTCAAGTGCTTCAA +
Preference number: 3 (lower is better)
Translates to: RIRKYWLSEWLS*RASPAQSQVLQ
Trigger: TTGAAGCACTTGAGACTGAGCTGGAGAAGCCCTTCAAGACAGCCATTCAGAAAGCCAATATTTACGGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR TCA 72 bp CCACCTCCCAGCACAAGAGCCTATGCTCTTGCTCTTTaGAATGCAAACCAAAACAAGAGCTTTAGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: PPPSTRAYALAL*NANQNKSFSLS
Trigger: TGAAAGACTAAAGCTCTTGTTTTGGTTTGCATTTCAAAGAGCAAGAGCATAGGCTCTTGTGCTGGGAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp GAAGTTGTCCCATTTTTCACCTGCAGTATTGTATACACTGATTGGGGGTTGTCGGCATGTCATCTTCAGTaGCATCCTTTATGTCCTCTT +
Preference number: 3 (lower is better)
Translates to: EVVPFFTCSIVYTDWGLSACHLQ*HPLCPL
Trigger: AAGAGGACATAAAGGATGCAACTGAAGATGACATGC...CGACAACCCCCAATCAGTGTATACAATACTGCAGGTGAAAAATGGGACAACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR-3UTR CAA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCCAAGGACGGAGTCCTaGACCTCTTTTCTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCPRTES*TSFLFL
Trigger: AAGAAAAAGAAAAGAGGTCAAGGACTCCGTCCTTGG...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp CCTGGACTAATCGACACTGAGAGACCATTCAGAACTTaGGAGTCAGGTCGAGAAGGATATGTAAATTTACAA +
Preference number: 3 (lower is better)
Translates to: PGLIDTERPFRT*ESGREGYVNLQ
Trigger: TTGTAAATTTACATATCCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CCA 72 bp TGTCCATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTaGCATCACTGTGTTTTCTTCATTCTTGTAGATTCC +
Preference number: 3 (lower is better)
Translates to: CPFAFWLPRFCR*HHCVFFILVDS
Trigger: GGAATCTACAAGAATGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CCA 72 bp AAATCATTCTTCAATCTCCTGCCAGAAGAGAGGGGCTaGGAGTTCTTCTGTTCATACACAGCTTTACATTCA +
Preference number: 3 (lower is better)
Translates to: KSFFNLLPEERG*EFFCSYTALHS
Trigger: TGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGGCAGGAGATTGAAGAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CCA 72 bp CTTTTGCTTTATATGTTAAAATACTTCCTCAGTGTCTaGTGGTCCTTGGAAGTCAATTCCCATGCAAGGAGG +
Preference number: 3 (lower is better)
Translates to: LLLYMLKYFLSV*WSLEVNSHARR
Trigger: CCTCCTTGCATGGGAATTGACTTCCAAGGACCACCAGACACTGAGGAAGTATTTTAACATATAAAGCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR-3UTR CAA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTTTCCATACAGGCTTTaGGTCCATTCTTCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAFPYRL*VHSSVF
Trigger: GAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR GCA 72 bp ATCAATTGTCCATTTGCTTTCTGGCTCCCAAGATTTTaGAGGTGGCATCACTGTGTTTTCTTCATTCTTGTA +
Preference number: 3 (lower is better)
Translates to: INCPFAFWLPRF*RWHHCVFFILV
Trigger: TACAAGAATGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATGGACAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR TCA 72 bp TTTCCATGGGAATTTCTTTGGTGTTGTCTCCATACTTaGTATTGTCCATTATGCTACAGGCAAACAACACTG +
Preference number: 3 (lower is better)
Translates to: FPWEFLWCCLHT*YCPLCYRQTTL
Trigger: CAGTGTTGTTTGCCTGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCTGTCCCGTTCACAGCTaGACCCACAGACCCTACCAG +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCCPVHS*THRPYQ
Trigger: CTGGTAGGGTCTGTGGGTGCAGCTGTGAACGGGACA...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCCATTCTTCAATCTCCTaGCAGAAGAGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCHSSIS*QKRGAG
Trigger: CCCAGCCCCTCTCTTCTGGCAGGAGATTGAAGAATG...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCACAGTTCTCTGCCCTTaGGGAGTTCAAAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCTVLCP*GVQSVT
Trigger: AGTGACACTTTGAACTCCTCAAGGGCAGAGAACTGT...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCAGACCATTCAGAACTTaGGAGTCAGGTCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCRPFRT*ESGREG
Trigger: TCCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCT...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATGTGCAAACCTCCCTGTaGGCCTCCTCAGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHVQTSL*ASSERE
Trigger: CTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCAC...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCCTGAATGAGTTGCAGTaGTGTACTTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCLNELQ*CTFSSS
Trigger: GGAGCTGGAAAAAGTACAGCACTGCAACTCATTCAG...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTCTGGGAGAGAGTCCCTaGTCCAGCCACACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: VSLSANLPVSLLREGVCSLGESP*SSHTGR
Trigger: CCTACCAGTGTGGCTGGAGCAGGGACTCTCTCCCAG...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCAACAATTCCAATGTTTaGGCGGAGGAACTGGACATT +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCNNSNV*AEELDI
Trigger: AATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTT...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTGCACAGAGAAGCACTaGGTGGTGGCTGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHCTEKH*VVAELP
Trigger: TGGCAGCTCAGCCACCACTCAGTGCTTCTCTGTGCA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCAGTCGAGGTCATGCGCTaGATGAAAAGGGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPVEVMR*MKRAIW
Trigger: CCAAATGGCCCTTTTCATTCAGCGCATGACCTCGAC...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCCAAGGACGGAGTCCTTaGCCTCTTTTCTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCQGRSP*PLFFFF
Trigger: AAAGAAAAAGAAAAGAGGTCAAGGACTCCGTCCTTG...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATAGCCTGGGGAAGCTCTaGTCGAGTGGGTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHSLGKL*SSGCLL
Trigger: CAACAAGCACCCACTCGATCAGAGCTTCCCCAGGCT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCTCAAGAATTCTGGCCTaGCCAGTTAACTTGCTAAAC +
Preference number: 4 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCSRILA*PVNLLN
Trigger: GTTTAGCAAGTTAACTGGTCAGGCCAGAATTCTTGA...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTAGGCAGCCATCCTGCTaGAGGCGGGGCTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSRQPSC*RRGSAI
Trigger: AATTGCAGAGCCCCGCCTGCAGCAGGATGGCTGCCT...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATAGGCATACAAGGGTGTaGCTGTCCCGTTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHRHTRV*LSRSQL
Trigger: CAGCTGTGAACGGGACAGTCACACCCTTGTATGCCT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATACAAGCGATGGGCAATaGCAATGCAGGTCCGACCCT +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHTSDGQ*QCRSDP
Trigger: AGGGTCGGACCTGCATTGTCATTGCCCATCGCTTGT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTAATGCTGGTGGCTGCTaGACGTCCAGTTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VSLSANLPVSLLREGVCSNAGGC*TSSCKG
Trigger: GCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATT...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAGATGGCAGGATAGGTTaGTGGGAACCGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGDGRIG*WEPWVQ
Trigger: CTGCACCCACGGTTCCCACCAACCTATCCTGCCATC...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAGGAAGAAGCACAAGATaGCCAGGCTCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGGRSTR*PGSASS
Trigger: GCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCC...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTCCCCTCTAGAGAGTTaGGACCCCTGGGACCCAACG +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSPLES*DPWDPT
Trigger: CGTTGGGTCCCAGGGGTCTCAACTCTCTAGAGGGGA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAATCAGCCACCACCCCTaGTTTGGCATAGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGISHHP*FGIGLQ
Trigger: CTGAAGGCCTATGCCAAAGCAGGGGTGGTGGCTGAT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCGAAAGGCAGCCATCCTaGTGCAGGCGGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSIERQPS*CRRGSA
Trigger: TGCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTC...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCAGCACTTCTTGCACCATaGCTTCACTCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPALLAP*LHSHCP
Trigger: TGGACAATGAGAGTGAAGCCATGGTGCAAGAAGTGC...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACATCCAGGACAAGTGTaGAGCCGTACCAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGHPGQV*SRTRRP
Trigger: TGGCCTTCTGGTACGGCTCCACACTTGTCCTGGATG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTGCCCATGCTGAATCTTACTCAGCACTTCTTGCACCATGGCTTCACTCTCATGAGCCGGCAGCCCCTTaGACTTGGGAAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: CAHAESYSALLAPWLHSHEPAAP*TWEASV
Trigger: TACAGATGCTTCCCAAGTTCAAGGGGCTGCCGGCTC...ATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp TTTGTAATCTGTCCCACCATCTCCAGGGCCTGCTTATCTCGAGAGGCAAATCCTGGAAGAAGCACAAGATaGCCAGGCTCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FVICPTISRACLSREANPGRSTR*PGSASS
Trigger: GCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCC...AGGATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGTGGGACAGATTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCATGGACTAATCGACACTaGGAGACCATTCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPWTNRH*ETIQNL
Trigger: CAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCA...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCATCCCCTCTAGAGAGTTaGGACCCCTGGGACCCAACG +
Preference number: 4 (lower is better)
Translates to: CKRRLFQELLHSVQLQRSSPLES*DPWDPT
Trigger: CGTTGGGTCCCAGGGGTCTCAACTCTCTAGAGGGGA...TGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAACCATCTACGTAGAGTaGGCTTGGGAGGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGTIYVE*AWEEAG
Trigger: TCCAGCTTCCTCCCAAGCTCACTCTACGTAGATGGT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTCCCTCTGCTAAAGGTCCTCGCAAGCATGTCATCTTCAGTTGCATCCTTTATTGTCCCGTTCACAGCTaGACCCACAGACCCTACCAG +
Preference number: 4 (lower is better)
Translates to: APSAKGPRKHVIFSCILYCPVHS*THRPYQ
Trigger: CTGGTAGGGTCTGTGGGTGCAGCTGTGAACGGGACA...ATAAAGGATGCAACTGAAGATGACATGCTTGCGAGGACCTTTAGCAGAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTTTTGCCACATCCACTaGTCCCAACAAACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHFCHIH*SQQTPV
Trigger: CACTGGCGTTTGTTGGGAGCAGTGGATGTGGCAAAA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTCCGTGGGTGCAGTCCTaGTCCCAAGGTTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSPWVQS*SQGFHF
Trigger: GAAATGAAAACCTTGGGAGCAGGACTGCACCCACGG...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTGGTAGAGAACAGAACTaGCTCTTGCTCCACTATCCC +
Preference number: 4 (lower is better)
Translates to: VSLSANLPVSLLREGVCSGREQN*LLLHYP
Trigger: GGGATAGTGGAGCAAGAGCCAGTTCTGTTCTCTACC...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTGCTACCCTTTGTTTCTaGCCACCACTCATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILATLCF*PPLIWP
Trigger: AGGCCAGATGAGTGGTGGCCAGAAACAAAGGGTAGC...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTTGGAGCGTTGCCGGATaGAAGCCCTTAAACTATCCT +
Preference number: 4 (lower is better)
Translates to: VSLSANLPVSLLREGVCSWSVAG*KPLNYP
Trigger: AGGATAGTTTAAGGGCTTCCATCCGGCAACGCTCCA...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATATCCGCGTTCTGGATaGTGGACAAGCGATGGGCAA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGYPRSG*WTSDGQ
Trigger: TTGCCCATCGCTTGTCCACCATCCAGAACGCGGATA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATACAGGAAACCACAGATaGTCGAGGTCATGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHTGNHR*SRSCAE
Trigger: TTCAGCGCATGACCTCGACCATCTGTGGTTTCCTGT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTTGTCTCAAAAATGCTaGTGGCTGCTGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHLSQKC*WLLHVQ
Trigger: CTGGACGTGCAGCAGCCACCAGCATTTTTGAGACAA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTTATGCAGTTTCTCGCTaGAACTGGGGAAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSYAVSR*NWGKAA
Trigger: GGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATA...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGGAAGAAGCACAAGATaGCCAGGCTCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFGRSTR*PGSASS
Trigger: GCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCATCCCCTCTAGAGAGTTaGGACCCCTGGGACCCAACG +
Preference number: 4 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSSPLES*DPWDPT
Trigger: CGTTGGGTCCCAGGGGTCTCAACTCTCTAGAGGGGA...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCACAAGCGATGGGCAATaGCAATGCAGGTCCGACCCT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFTSDGQ*QCRSDP
Trigger: AGGGTCGGACCTGCATTGTCATTGCCCATCGCTTGT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTAGGTCATGCGCTGAATaGAAAGGGCCATTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILRSCAE*KGPFGQ
Trigger: CTGACCAAATGGCCCTTTTCATTCAGCGCATGACCT...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAACCATCTCCAGGGCCTaGTTATCTCGAGAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGTISRA*LSREAN
Trigger: ATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAACAAACGCCAGTGTCTaGCCTGGACTAATCGACACT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGTNASV*PGLIDT
Trigger: AGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAATACTTTCCCTTTCTaGCTCCCTCAGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGNTFPF*LPQPES
Trigger: GCTCTCAGGCTGAGGGAGGCAGAAAGGGAAAGTATT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTAATACTTTCCCTTTCTaGCTCCCTCAGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSNTFPF*LPQPES
Trigger: GCTCTCAGGCTGAGGGAGGCAGAAAGGGAAAGTATT...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATGCTCCCCCACTGAATTaGAGTCAAACCACCCTATTT +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHAPPLN*SQTTLF
Trigger: AAATAGGGTGGTTTGACTGCAATTCAGTGGGGGAGC...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTGGCTCCCAAGATTTTaGAGGTGGCATCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHWLPRF*RWHHCV
Trigger: AACACAGTGATGCCACCTGCAAAATCTTGGGAGCCA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTAAGAAAGCTGAGACTTaGAGCGTTGCCGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILKKAET*SVAGWK
Trigger: CTTCCATCCGGCAACGCTCCAAGTCTCAGCTTTCTT...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCAGCTTTTCCTGGAATCTaGAGTTCTTGTAACTCAACG +
Preference number: 4 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPAFPGI*SSCNST
Trigger: CGTTGAGTTACAAGAACTCCAGATTCCAGGAAAAGC...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTTTTTTCCAGCTCCACTaGGTCCTACCAGAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSFFQLH*VLPELS
Trigger: TGACAGCTCTGGTAGGACCCAGTGGAGCTGGAAAAA...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGGGCAGGATAGGTTGGTaGGAACCGTGGGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLGRIGW*EPWVQS
Trigger: GGACTGCACCCACGGTTCCCACCAACCTATCCTGCC...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCAAGCGATGAGCAACTaGAATGATTGTGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILQAMSN*NDCVPM
Trigger: CATGGGCACACAATCATTTCAGTTGCTCATCGCTTG...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGGCCCCAGCATTGCCCTaGAACCAAATTTACGTAGCC +
Preference number: 4 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLAPALP*NQIYVA
Trigger: GGCTACGTAAATTTGGTTTCAGGGCAATGCTGGGGC...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGGAGCCGGCAGCCCCTTaGACTTGGGAAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLEPAAP*TWEASV
Trigger: TACAGATGCTTCCCAAGTTCAAGGGGCTGCCGGCTC...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCGGAAGAAGCACAAGATaGCCAGGCTCAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSIGRSTR*PGSASS
Trigger: GCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCC...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATCTCAAGTGCTTCAATaGACCGCCTCTCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGSQVLQ*TASPFQ
Trigger: TTGGAAAGGAGAGGCGGTTCATTGAAGCACTTGAGA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTGCCCATGCTGAATCTTACTCAGCACTTCTTGCACCATGGCTTCACTCTCATTCTGAATGGCTGTCTTaGAGGGCTTCTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CAHAESYSALLAPWLHSHSEWLS*RASPAQ
Trigger: CTGAGCTGGAGAAGCCCTTCAAGACAGCCATTCAGA...ATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTCTGAATGGCTGTCTTaGAGGGCTTCTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSEWLS*RASPAQ
Trigger: CTGAGCTGGAGAAGCCCTTCAAGACAGCCATTCAGA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTCCCTCTGCTAAAGGTCCTCGCAAGCATGTCATCTTCAGTTGCATCCTTTATTGGGGGATCCAGTGGTaGCTAGTTTGTAGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: APSAKGPRKHVIFSCILYWGIQW*LVCSRL
Trigger: GAGCCTACTACAAACTAGTCACCACTGGATCCCCCA...ATAAAGGATGCAACTGAAGATGACATGCTTGCGAGGACCTTTAGCAGAGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTGGGGGATCCAGTGGTaGCTAGTTTGTAGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFWGIQW*LVCSRL
Trigger: GAGCCTACTACAAACTAGTCACCACTGGATCCCCCA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATGCGTCATGTGTGTCTaGGATTCTTGCATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGCVMCV*DSCIGS
Trigger: TGACCCAATGCAAGAATCTCAGACACACATGACGCA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCGAGGGTTCAAAAATaGAAGACAGTTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGPRVQK*KTVLCP
Trigger: AGGGCAGAGAACTGTCTTTCATTTTTGAACCCTCGG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCAAGTAACTGGCAAATTTaGTCATTTCGCTCTCGATGT +
Preference number: 4 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPSNWQI*SFRSRC
Trigger: ACATCGAGAGCGAAATGATCAAATTTGCCAGTTACT...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTTCTCATTGATGAAATaGCTTCATCAGCCACCACCC +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHFSLMK*LHQPPP
Trigger: GGGTGGTGGCTGATGAAGTCATTTCATCAATGAGAA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATGCACTCAGTACAACTaGAGAGATCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGCTQYN*RDHPEH
Trigger: GTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp TGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGATTTTGCCACATCCACTaGTCCCAACAAACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WGVREGSSKSCCTQYNCRFCHIH*SQQTPV
Trigger: CACTGGCGTTTGTTGGGAGCAGTGGATGTGGCAAAA...TCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAATCACCACCCCCTGTaGCATGACAGCAATGATATC +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGNHHPL*HDSNDI
Trigger: GATATCATTGCTGTCATGGCACAGGGGGTGGTGATT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTCCATGCACTCAGTACAACTaGAGAGATCACCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: EGSSKSCCTQYNCRDHPPCTQYN*RDHPPN
Trigger: GTTTGGAGGGTGATCTCTGCAGTTGTACTGAGTGCA...TGGAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647920.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCCAGACCAATGGTGGCTaGTCCAATCCCAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFQTNGG*SNPNER
Trigger: CCTCTCATTGGGATTGGAGCAGCCACCATTGGTCTG...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAAAAATGCTGGTGGCTaGTGCACGTCCAGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGKNAGG*CTSSCK
Trigger: TTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATCTTGTGTCTCTAAGTaGAAACCTCCCTGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGSCVSK*KPPCEP
Trigger: AGGCTCACAGGGAGGTTTGCACTTAGAGACACAAGA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGGTGGGAACCGTGGGTaGAGTCCTGCTCCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPGGNRG*SPAPKV
Trigger: AACCTTGGGAGCAGGACTGCACCCACGGTTCCCACC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAGCACTTCTTGCACCATaGCTTCACTCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGALLAP*LHSHCP
Trigger: TGGACAATGAGAGTGAAGCCATGGTGCAAGAAGTGC...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATTGGAGCGTTGCCGGATaGAAGCCCTTAAACTATCCT +
Preference number: 4 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDWSVAG*KPLNYP
Trigger: AGGATAGTTTAAGGGCTTCCATCCGGCAACGCTCCA...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAACATCCTGGTCTGTGTaGCTCCTGATAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGTSWSV*LLIKPR
Trigger: TCTTGGCTTTATCAGGAGCCACACAGACCAGGATGT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAGGTCCGACCCTCTCTaGCTTTGTCTAGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFRSDPL*LCLEQP
Trigger: AGGTTGCTCTAGACAAAGCCAGAGAGGGTCGGACCT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATATGATATCCGCGTTCTaGATGGTGGACAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDMISAF*MVDKRW
Trigger: CCATCGCTTGTCCACCATCCAGAACGCGGATATCAT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTGCCATCAGTTCTTCATaGGTCCCCTTTTCAATCACC +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILAISSS*VPFSIT
Trigger: GGTGATTGAAAAGGGGACCCATGAAGAACTGATGGC...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCCCACCACCCCTGCTTTaGCATAGGCCTTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSIPPPLL*HRPSAH
Trigger: ATGAGCTGAAGGCCTATGCCAAAGCAGGGGTGGTGG...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTTGTCCATTTGCTTTCTaGCTCCCAAGATTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSLSANLPVSLLREGVCSCPFAF*LPRFCR
Trigger: CCTGCAAAATCTTGGGAGCCAGAAAGCAAATGGACA...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTTTCCTCAGTGTCTGGTaGTCCTTGGAAGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSFLSVW*SLEVNS
Trigger: GGAATTGACTTCCAAGGACCACCAGACACTGAGGAA...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGTGCTCCGACTTCCACTaGAAGAAATATCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLCSDFH*KKYPCG
Trigger: GCCACAGGGATATTTCTTTCAGTGGAAGTCGGAGCA...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATCAAGCGATGAGCAACTaGAATGATTGTGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDQAMSN*NDCVPM
Trigger: CATGGGCACACAATCATTTCAGTTGCTCATCGCTTG...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCTGTAGAAATTGGGTaGAAAGAGATACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGPVEIG*KEIHSP
Trigger: TGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTCCTGTAGAAATTGGGTaGAAAGAGATACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSPVEIG*KEIHSP
Trigger: TGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGG...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATTCTCAAGTGCTTCAATaGACCGCCTCTCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDSQVLQ*TASPFQ
Trigger: TTGGAAAGGAGAGGCGGTTCATTGAAGCACTTGAGA...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp ATAACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTCTGAATGGCTGTCTTaGAGGGCTTCTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ITWGVREGSSKSCCTQYNSEWLS*RASPAQ
Trigger: CTGAGCTGGAGAAGCCCTTCAAGACAGCCATTCAGA...GTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439188.1
ENST00000647920.1
CDS-3UTR TCA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGTGTCGGTCCAGCAGTTaGAAAAAGCGTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLCRSSS*KKRAAD
Trigger: ATCAGCTGCACGCTTTTTTCAACTGCTGGACCGACA...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTGTCGGTCCAGCAGTTaGAAAAAGCGTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFCRSSS*KKRAAD
Trigger: ATCAGCTGCACGCTTTTTTCAACTGCTGGACCGACA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATGGACTAATCGACACTaGGAGACCATTCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGWTNRH*ETIQNL
Trigger: CAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAAACGTTCCAACAGCTaGATGCTAGTGCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGKRSNS*MLVLLP
Trigger: TGGCAAAAGCACTAGCATTCAGCTGTTGGAACGTTT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GAAGTTGTCCCATTTTTCACCTGCAGTATTGTATACACTGATTGGGGGTTGTCGACAAGCGATGGGCAATaGCAATGCAGGTCCGACCCT +
Preference number: 4 (lower is better)
Translates to: EVVPFFTCSIVYTDWGLSTSDGQ*QCRSDP
Trigger: AGGGTCGGACCTGCATTGTCATTGCCCATCGCTTGT...CGACAACCCCCAATCAGTGTATACAATACTGCAGGTGAAAAATGGGACAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCAAGAAACGTTTGTTaGTTGCCTGTTATAGACCCG +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHSRNVC*LPVIDP
Trigger: CGGGTCTATAACAGGCAATCAACAAACGTTTCTTGA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAACCAATGATGGTATCTaGAGCTCTGACCGTAGACAA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGTNDGI*SSDRRQ
Trigger: TTGTCTACGGTCAGAGCTGCAGATACCATCATTGGT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTACCAATGATGGTATCTaGAGCTCTGACCGTAGACAA +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILTNDGI*SSDRRQ
Trigger: TTGTCTACGGTCAGAGCTGCAGATACCATCATTGGT...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTGGTTCAACTTCTTCCTaGACAGGAATGTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CVSEILALGQLMGDPVVTGSTSS*TGMSLS
Trigger: GGACAAGGACATTCCTGTGCAGGAAGAAGTTGAACC...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATAACCAGGCAATATCTTaGCCCAGCATTGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDNQAIS*PSIALK
Trigger: TTTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp CCCTCTTTCCACTGCAGTGCCATGTTCAAAACCAATGATGGTATCTGCAGCTCTACCATCTCCAGGGCCTaGTTATCTCGAGAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PSFHCSAMFKTNDGICSSTISRA*LSREAN
Trigger: ATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGT...AGAGCTGCAGATACCATCATTGGTTTTGAACATGGCACTGCAGTGGAAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTCCAAACTCTTCCAAGAGCTGTTaGACTCAGTACAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GSSKSCCTQYNCRDHPPNSSKSC*TQYNCR
Trigger: TCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA...GTTTGGAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647920.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATCTTCCAAGAGCTGTTaGACTCAGTACAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGSSKSC*TQYNCR
Trigger: TCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGACAAACGCCAGTGTCTaGCCTGGACTAATCGACACT +
Preference number: 4 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLTNASV*PGLIDT
Trigger: AGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGT...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATAGCCTGTTTTGCAGCTaGTATGACTCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDSLFCS*YDSFHG
Trigger: CCCATGGAAAGAGTCATAGCAGCTGCAAAACAGGCT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp AAGATGACCAGGCTCAGCTTCCAGCTAAAGGAGAAGGCAATGATCATGGCCACAAATCACCACCCCCTGTaGCATGACAGCAATGATATC +
Preference number: 4 (lower is better)
Translates to: KMTRLSFQLKEKAMIMATNHHPL*HDSNDI
Trigger: GATATCATTGCTGTCATGGCACAGGGGGTGGTGATT...TGTGGCCATGATCATTGCCTTCTCCTTTAGCTGGAAGCTGAGCCTGGTCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGAGTGGTGGCTGAGCTaGCACTTGACATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFEWWLS*HLTLGF
Trigger: AAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCCTGCAGGCGGGGCTCTaGAATTCTGTTTCCATACAG +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSILQAGL*NSVSIQ
Trigger: CTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAG...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAGGAAGTCAATTCCCATaGAAGGAGGAGACACCAAAA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGGSQFP*KEETPK
Trigger: TTTTGGTGTCTCCTCCTTGCATGGGAATTGACTTCC...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGGGTAGAGAACAGAACTaGCTCTTGCTCCACTATCCC +
Preference number: 4 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLGREQN*LLLHYP
Trigger: GGGATAGTGGAGCAAGAGCCAGTTCTGTTCTCTACC...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp GGCAATGATCATGGCCACAGTGACGTTAGTGAAGGAATTGACTATCATCCCGATGCTACCCTTTGTTTCTaGCCACCACTCATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GNDHGHSDVSEGIDYHPDATLCF*PPLIWP
Trigger: AGGCCAGATGAGTGGTGGCCAGAAACAAAGGGTAGC...ATCGGGATGATAGTCAATTCCTTCACTAACGTCACTGTGGCCATGATCATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATGCACTTCTTGCACCATaGCTTCACTCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDALLAP*LHSHCP
Trigger: TGGACAATGAGAGTGAAGCCATGGTGCAAGAAGTGC...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp TTTGTAATCTGTCCCACCATCTCCAGGGCCTGCTTATCTCGAGAGGCAAATCCTCAGAATCCTCCTAACTaGGGCAGGTTCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: FVICPTISRACLSREANPQNPPN*GRFNFF
Trigger: GAAGAAGTTGAACCTGCCCCAGTTAGGAGGATTCTG...AGGATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGTGGGACAGATTACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp TGCACCCACAGACCCTACCAGCATGTAGGGCCATTCTGGAGCACTGAATTTCAGAATGGAGCCCCTCATTaGAGATTAAGTAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: CTHRPYQHVGPFWSTEFQNGAPH*RLSNLH
Trigger: ATGGAGGTTACTTAATCTCCAATGAGGGGCTCCATT...CTGAAATTCAGTGCTCCAGAATGGCCCTACATGCTGGTAGGGTCTGTGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATAATGGAGCCCCTCATTaGAGATTAAGTAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHNGAPH*RLSNLH
Trigger: ATGGAGGTTACTTAATCTCCAATGAGGGGCTCCATT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp TGCACCCACAGACCCTACCAGCATGTAGGGCCATTCTGGAGCACTGAATTTCAGAGCTTTTGCATAACTTaGGGTGTAAGAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CTHRPYQHVGPFWSTEFQSFCIT*GVREGS
Trigger: AGAGCCTTCTCTTACACCCCAAGTTATGCAAAAGCT...CTGAAATTCAGTGCTCCAGAATGGCCCTACATGCTGGTAGGGTCTGTGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp TTTGTAATCTGTCCCACCATCTCCAGGGCCTGCTTATCTCGAGAGGCAAATCCTATTGTATACACTGATTaGGGGTTGTCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FVICPTISRACLSREANPIVYTD*GLSVQQ
Trigger: CTGCTGGACCGACAACCCCCAATCAGTGTATACAAT...AGGATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGTGGGACAGATTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp AATTCCAGCAACAGTGCGGATGTTACTGAGGGCTTCATTTGTAATCTGTCCCACAGGTCCGACCCTCTCTaGCTTTGTCTAGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: NSSNSADVTEGFICNLSHRSDPL*LCLEQP
Trigger: AGGTTGCTCTAGACAAAGCCAGAGAGGGTCGGACCT...GTGGGACAGATTACAAATGAAGCCCTCAGTAACATCCGCACTGTTGCTGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp GGCAATGATCATGGCCACAGTGACGTTAGTGAAGGAATTGACTATCATCCCGATTATCCGCGTTCTGGATaGTGGACAAGCGATGGGCAA +
Preference number: 4 (lower is better)
Translates to: GNDHGHSDVSEGIDYHPDYPRSG*WTSDGQ
Trigger: TTGCCCATCGCTTGTCCACCATCCAGAACGCGGATA...ATCGGGATGATAGTCAATTCCTTCACTAACGTCACTGTGGCCATGATCATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACATATTAATCAGGACTaGCTCCTGCACAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGHINQD*LLHREA
Trigger: TGCTTCTCTGTGCAGGAGCCAGTCCTGATTAATATG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATGTTAAGAAACACAGCTaGTCTTCAGTCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHVKKHS*SSVLLF
Trigger: GAACAGAAGGACTGAAGACCAGCTGTGTTTCTTAAC...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTCTAATTCCCCAACGCTaGGCGAACACAAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSLIPQR*ANTRFF
Trigger: GAAAAATCTTGTGTTCGCCCAGCGTTGGGGAATTAG...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTAGCTGTCATTTCCCCTaGTTTAATGACCATGTTGAG +
Preference number: 4 (lower is better)
Translates to: VSLSANLPVSLLREGVCSSCHFP*FNDHVE
Trigger: CTCAACATGGTCATTAAACCAGGGGAAATGACAGCT...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCGGTTGGTGGGAACCGTaGGTGCAGTCCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAGWWEP*VQSCSQ
Trigger: TTGGGAGCAGGACTGCACCCACGGTTCCCACCAACC...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTCCTGTAGAAATTGGGTaGAAAGAGATACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: CVSEILALGQLMGDPVVTPVEIG*KEIHSP
Trigger: TGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGG...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTCTCAAGTGCTTCAATaGACCGCCTCTCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSQVLQ*TASPFQ
Trigger: TTGGAAAGGAGAGGCGGTTCATTGAAGCACTTGAGA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCACAAAATCATGCAGCTaGGCCTGTTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFTKSCS*ACFAAA
Trigger: AGCAGCTGCAAAACAGGCTCAGCTGCATGATTTTGT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTGCCCATGCTGAATCTTACTCAGCACTTCTTGCACCATGGCTTCACTCTCATTCTCTGGGAGTGACATaGCAAAATCATGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CAHAESYSALLAPWLHSHSLGVT*QNHAAE
Trigger: CTCAGCTGCATGATTTTGTCATGTCACTCCCAGAGA...ATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGTGGGGGATCCAGTGGTaGCTAGTTTGTAGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLWGIQW*LVCSRL
Trigger: GAGCCTACTACAAACTAGTCACCACTGGATCCCCCA...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTGCCCATGCTGAATCTTACTCAGCACTTCTTGCACCATGGCTTCACTCTCATTGCGTCATGTGTGTCTaGGATTCTTGCATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CAHAESYSALLAPWLHSHCVMCV*DSCIGS
Trigger: TGACCCAATGCAAGAATCTCAGACACACATGACGCA...ATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGTGTCACTTACTCCCTaGTGTCTCACTAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFVSLTP*CLTNSH
Trigger: GTGGGAATTAGTGAGACATCAGGGAGTAAGTGACAC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCACAGTTCTCTGCCCTTaGGGAGTTCAAAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFTVLCP*GVQSVT
Trigger: AGTGACACTTTGAACTCCTCAAGGGCAGAGAACTGT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTTGTTCTTTTCAAATCTaGCCTTGGTCTAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: VSLSANLPVSLLREGVCSCSFQI*PWSSSR
Trigger: TCTTGAGCTAGACCAAGGTCAGATTTGAAAAGAACA...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGATTCAGCTCCCCCACTaGATTGCAGTCAAACCACCC +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLIQLPH*IAVKPP
Trigger: GGGTGGTTTGACTGCAATTCAGTGGGGGAGCTGAAT...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCATCACCGTCTGCCTCCTaGCTTGGCAACCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSSPSAS*LGNHQE
Trigger: TTCTTGATGGTTGCCAAGTCAGGAGGCAGACGGTGA...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTACCAATGATGGTATCTaGAGCTCTGACCGTAGACAA +
Preference number: 4 (lower is better)
Translates to: CVSEILALGQLMGDPVVTTNDGI*SSDRRQ
Trigger: TTGTCTACGGTCAGAGCTGCAGATACCATCATTGGT...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp ATAACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACGGTCCCTCTTTCCACTaGAGTGCCATGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: ITWGVREGSSKSCCTQYNGPSFH*SAMFKT
Trigger: GGTTTTGAACATGGCACTGCAGTGGAAAGAGGGACC...GTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAACCAGGCAATATCTTaGCCCAGCATTGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFNQAIS*PSIALK
Trigger: TTTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAAGTCTTGTTGTCAATaGTCCAGGGCTATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGKSCCQ*SRAISE
Trigger: CTCAGAAATAGCCCTGGAGCATTGACAACAAGACTT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTGCACTCAGTACAACTaGAGAGATCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFCTQYN*RDHPEH
Trigger: GTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp TTTGTAATCTGTCCCACCATCTCCAGGGCCTGCTTATCTCGAGAGGCAAATCCTTCTTCCAAGAGCTGTTaGACTCAGTACAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: FVICPTISRACLSREANPSSKSC*TQYNCR
Trigger: TCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA...AGGATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGTGGGACAGATTACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAGACCATTCAGAACTTaGGAGTCAGGTCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFRPFRT*ESGREG
Trigger: TCCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAGCCTGTTTTGCAGCTaGTATGACTCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSLFCS*YDSFHG
Trigger: CCCATGGAAAGAGTCATAGCAGCTGCAAAACAGGCT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAATCACCACCCCCTGTaGCATGACAGCAATGATATC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFNHHPL*HDSNDI
Trigger: GATATCATTGCTGTCATGGCACAGGGGGTGGTGATT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTCCCTCTGCTAAAGGTCCTCGCAAGCATGTCATCTTCAGTTGCATCCTTTATGCCTCCTTGGCAGCTTaGACTATGTCTTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: APSAKGPRKHVIFSCILYASLAA*TMSSIV
Trigger: AACAATGGAAGACATAGTCCAAGCTGCCAAGGAGGC...ATAAAGGATGCAACTGAAGATGACATGCTTGCGAGGACCTTTAGCAGAGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATAAAGAAAGCTGAGACTTaGAGCGTTGCCGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHIKKAET*SVAGWK
Trigger: CTTCCATCCGGCAACGCTCCAAGTCTCAGCTTTCTT...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACATGTAGGGCCATTCTaGAGCACTGAATTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGHVGPF*STEFQN
Trigger: ATTCTGAAATTCAGTGCTCCAGAATGGCCCTACATG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGACATCCTGGTCTGTGTaGCTCCTGATAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLTSWSV*LLIKPR
Trigger: TCTTGGCTTTATCAGGAGCCACACAGACCAGGATGT...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATATAAACATGATGCACTaGGCAAAGGCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHINMMH*AKAKQN
Trigger: ATTCTGCTTTGCCTTTGCCCAGTGCATCATGTTTAT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAATGGAGCCCCTCATTaGAGATTAAGTAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGNGAPH*RLSNLH
Trigger: ATGGAGGTTACTTAATCTCCAATGAGGGGCTCCATT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAGCTTTTGCATAACTTaGGGTGTAAGAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGSFCIT*GVREGS
Trigger: AGAGCCTTCTCTTACACCCCAAGTTATGCAAAAGCT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTGTATACACTGATTaGGGGTTGTCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFIVYTD*GLSVQQ
Trigger: CTGCTGGACCGACAACCCCCAATCAGTGTATACAAT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTTGTCTAAGGCAGAAGTaGCTTCATCTAGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSCLRQK*LHLVAR
Trigger: TCTTGCTACTAGATGAAGCCACTTCTGCCTTAGACA...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGCCATCAGTTCTTCATaGGTCCCCTTTTCAATCACC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFAISSS*VPFSIT
Trigger: GGTGATTGAAAAGGGGACCCATGAAGAACTGATGGC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAGTTAAGAAACACAGCTaGTCTTCAGTCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGVKKHS*SSVLLF
Trigger: GAACAGAAGGACTGAAGACCAGCTGTGTTTCTTAAC...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTGCCCATGCTGAATCTTACTCAGCACTTCTTGCACCATGGCTTCACTCTCATACCGTAGACAAGCGATaGGCAACTGAAATGATTGTG +
Preference number: 4 (lower is better)
Translates to: CAHAESYSALLAPWLHSHTVDKR*ATEMIV
Trigger: CACAATCATTTCAGTTGCTCATCGCTTGTCTACGGT...ATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp ATAACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACGTAGGCACACACCATTaGTCTGTGACCTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ITWGVREGSSKSCCTQYNVGTHH*SVTFVP
Trigger: AGGAACAAAGGTCACAGATCAATGGTGTGTGCCTAC...GTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGAGCCGGCAGCCCCTTaGACTTGGGAAGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHEPAAP*TWEASV
Trigger: TACAGATGCTTCCCAAGTTCAAGGGGCTGCCGGCTC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp ATAACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTCTCAAGTGCTTCAATaGACCGCCTCTCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ITWGVREGSSKSCCTQYNSQVLQ*TASPFQ
Trigger: TTGGAAAGGAGAGGCGGTTCATTGAAGCACTTGAGA...GTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439188.1
ENST00000647920.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAAACGTTCCAACAGCTaGATGCTAGTGCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFKRSNS*MLVLLP
Trigger: TGGCAAAAGCACTAGCATTCAGCTGTTGGAACGTTT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCAACAAAATCATGCAGCTaGGCCTGTTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CKRRLFQELLHSVQLQRSTKSCS*ACFAAA
Trigger: AGCAGCTGCAAAACAGGCTCAGCTGCATGATTTTGT...TGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAATATTTCTCTGGGAGTaGCATGACAAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGIFLWE*HDKIMQ
Trigger: CTGCATGATTTTGTCATGTCACTCCCAGAGAAATAT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCTGCGTCATGTGTGTCTaGGATTCTTGCATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSICVMCV*DSCIGS
Trigger: TGACCCAATGCAAGAATCTCAGACACACATGACGCA...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATGTTCTTTTCAAATCTaGCCTTGGTCTAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGCSFQI*PWSSSR
Trigger: TCTTGAGCTAGACCAAGGTCAGATTTGAAAAGAACA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTACTTCGAAGAATTACTaGGTCAGACATGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSTSKNY*VRHGNC
Trigger: GCAATTACCATGTCTGACTCAGTAATTCTTCGAAGT...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCCTTGTAACCATCTTCTaGCATGCAGTCAATGATGGG +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFLVTIF*HAVNDG
Trigger: CCCATCATTGACTGCATGTCAGAAGATGGTTACAAG...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTATGCAGGGAGGTGCTaGGGAGTAAAAGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAYAGRC*GVKGLG
Trigger: TCCCAGGCCTTTTACTCCTCAGCACCTCCCTGCATA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATATAGCGAATATTTTCTaGAATGGTGGTAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHIANIF*NGGREQ
Trigger: CTGTTCTCTACCACCATTGCAGAAAATATTCGCTAT...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCTGCACTCAGTACAACTaGAGAGATCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSICTQYN*RDHPEH
Trigger: GTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCA...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTCTTCCAAGAGCTGTTaGACTCAGTACAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSSKSC*TQYNCR
Trigger: TCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCATTCCTTCACCGTCTaGCTCCTGACTTGGCAACCA +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCHSFTV*LLTWQP
Trigger: TGGTTGCCAAGTCAGGAGGCAGACGGTGAAGGAATG...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCGCCTCCTTGGCAGCTTaGACTATGTCTTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSIASLAA*TMSSIV
Trigger: AACAATGGAAGACATAGTCCAAGCTGCCAAGGAGGC...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTCCAAACATAAACATGATGCACTaGGCAAAGGCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GSSKSCCTQYNCRDHPPNINMMH*AKAKQN
Trigger: ATTCTGCTTTGCCTTTGCCCAGTGCATCATGTTTAT...GTTTGGAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647920.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAATAAACATGATGCACTaGGCAAAGGCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGINMMH*AKAKQN
Trigger: ATTCTGCTTTGCCTTTGCCCAGTGCATCATGTTTAT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp AAGATGACCAGGCTCAGCTTCCAGCTAAAGGAGAAGGCAATGATCATGGCCACATGTCTAAGGCAGAAGTaGCTTCATCTAGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: KMTRLSFQLKEKAMIMATCLRQK*LHLVAR
Trigger: TCTTGCTACTAGATGAAGCCACTTCTGCCTTAGACA...TGTGGCCATGATCATTGCCTTCTCCTTTAGCTGGAAGCTGAGCCTGGTCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGATGATATCCGCGTTCTaGATGGTGGACAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLMISAF*MVDKRW
Trigger: CCATCGCTTGTCCACCATCCAGAACGCGGATATCAT...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCACAGGCAAACAACACTaGTTCCTGGGAAACAATTCC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFTGKQH*FLGNNS
Trigger: GGAATTGTTTCCCAGGAACCAGTGTTGTTTGCCTGT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGTCTCAAAAATGCTGGTaGCTGCTGCACGTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLSQKCW*LLHVQL
Trigger: CAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGA...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATTCCATACAGGCTTTTaGTCCATTCTTCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGFHTGF*SILLSS
Trigger: TGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTGCAAAGTCACTAGAGTaGAGTAAACACCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CVSEILALGQLMGDPVVTAKSLE*SKHLSF
Trigger: AAAGGAAAGGTGTTTACTTCACTCTAGTGACTTTGC...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAGGCATACAAGGGTGTaGCTGTCCCGTTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHRHTRV*LSRSQL
Trigger: CAGCTGTGAACGGGACAGTCACACCCTTGTATGCCT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCGCCCCAGCATTGCCCTaGAACCAAATTTACGTAGCC +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAAPALP*NQIYVA
Trigger: GGCTACGTAAATTTGGTTTCAGGGCAATGCTGGGGC...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GGCAATGATCATGGCCACAGTGACGTTAGTGAAGGAATTGACTATCATCCCGATAAACGTTCCAACAGCTaGATGCTAGTGCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GNDHGHSDVSEGIDYHPDKRSNS*MLVLLP
Trigger: TGGCAAAAGCACTAGCATTCAGCTGTTGGAACGTTT...ATCGGGATGATAGTCAATTCCTTCACTAACGTCACTGTGGCCATGATCATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTCCCCTCTAGAGAGTTaGGACCCCTGGGACCCAACG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSPLES*DPWDPT
Trigger: CGTTGGGTCCCAGGGGTCTCAACTCTCTAGAGGGGA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAACAATTCCAATGTTTaGGCGGAGGAACTGGACATT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFNNSNV*AEELDI
Trigger: AATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGCCGAGGGTTCAAAAATaGAAGACAGTTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLPRVQK*KTVLCP
Trigger: AGGGCAGAGAACTGTCTTTCATTTTTGAACCCTCGG...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTCATTTTCTGTATCTaGCGAGCTGCGGCAATGACC +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCLIFCI*RAAAMT
Trigger: GGTCATTGCCGCAGCTCGTCAGATACAGAAAATGAG...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTTTGTTGCATCTTCTCTaGCATAGCGAATATTTTCTG +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSLLHLL*HSEYFL
Trigger: CAGAAAATATTCGCTATGGCAGAGAAGATGCAACAA...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTGTCCCATTTTTCACCTaGAGTATTGTATACACTGAT +
Preference number: 4 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSVPFFT*SIVYTD
Trigger: ATCAGTGTATACAATACTGCAGGTGAAAAATGGGAC...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTTGTCTAGAGCAACCTaGACCGTCTTTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFLSRAT*TVFSLS
Trigger: AGAAAGTGAAAAGACGGTGCAGGTTGCTCTAGACAA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGTCAGACATGGTAATTaGAACCCACAGCCAACGACC +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPVRHGN*NPQPTT
Trigger: GGTCGTTGGCTGTGGGTTGCAATTACCATGTCTGAC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTTATTCCATGGAGAAATaGACACAAACTTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILYSMEK*TQTSHK
Trigger: TTTGTGGGAAGTTTGTGTGCATTTCTCCATGGAATA...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTCCTGTGATAAGTACTaGGACAGCAATTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSCDKY*DSNSSI
Trigger: TATGCTGGAATTGCTGTCGCAGTACTTATCACAGGA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTTATCAATTGTCCATTTaGTTTCTGGCTCCCAAGATT +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILYQLSI*FLAPKI
Trigger: AATCTTGGGAGCCAGAAAGCAAATGGACAATTGATA...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTCCCTCTGCTAAAGGTCCTCGCAAGCATGTCATCTTCAGTTGCATCCTTTATTGTCAAATTGCTAGATaGAAGGTGACACCAGTCATG +
Preference number: 4 (lower is better)
Translates to: APSAKGPRKHVIFSCILYCQIAR*KVTPVM
Trigger: CATGACTGGTGTCACCTTCCATCTAGCAATTTGACA...ATAAAGGATGCAACTGAAGATGACATGCTTGCGAGGACCTTTAGCAGAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCATGTAGGGCCATTCTaGAGCACTGAATTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLHVGPF*STEFQN
Trigger: ATTCTGAAATTCAGTGCTCCAGAATGGCCCTACATG...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAGCTTTTGCATAACTTaGGGTGTAAGAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSFCIT*GVREGS
Trigger: AGAGCCTTCTCTTACACCCCAAGTTATGCAAAAGCT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAATTGTATACACTGATTaGGGGTTGTCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSIVYTD*GLSVQQ
Trigger: CTGCTGGACCGACAACCCCCAATCAGTGTATACAAT...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAAATCAATCTTCCCCTaGAAGTTGTCCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGKSIFP*KLSHFS
Trigger: TGAAAAATGGGACAACTTCCAGGGGAAGATTGATTT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTGTCTAAGGCAGAAGTaGCTTCATCTAGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFCLRQK*LHLVAR
Trigger: TCTTGCTACTAGATGAAGCCACTTCTGCCTTAGACA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCAGTAGCACGCCTGGCTaGGCTATTCCATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCSSTPG*AIPWRN
Trigger: ATTTCTCCATGGAATAGCCCAGCCAGGCGTGCTACT...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCCCATTTGTCATGTTCTaGTTGAGGGAACTGTTAGTC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFPFVMF*LRELLV
Trigger: GACTAACAGTTCCCTCAACCAGAACATGACAAATGG...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTACACACTCAGACCAATaGTGGCTGCTCCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPTHSDQ*WLLQSQ
Trigger: TTGGGATTGGAGCAGCCACCATTGGTCTGAGTGTGT...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCCTGGACAAGGGTTCCTaGTGTATATTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSILDKGS*CIFSFI
Trigger: GATGAAGGAGAATATACACCAGGAACCCTTGTCCAG...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCTCTTCACCTCTGGTCTaGAAGGATAATGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSISSPLV*KDNGRS
Trigger: TGACCTTCCATTATCCTTCCAGACCAGAGGTGAAGA...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCTTCTATGTCATTCTGTaGTGTTTTGAGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSIFYVIL*CFEGAG
Trigger: CCCTGCTCCCTCAAAACACCACAGAATGACATAGAA...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTCCAGAAGAGAGGGGCTaGGAGTTCTTCTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPPEERG*EFFCSY
Trigger: GTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGGTGTCTGGTGGTCCTTaGAAGTCAATTCCCATGCAA +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLVSGGP*KSIPMQ
Trigger: TTGCATGGGAATTGACTTCCAAGGACCACCAGACAC...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 72 bp ACCGAGGGTTCAAAAATGAAAGACAGTTCTCTGCCCTaGAGGAGTTCAAAGTGTCACTTACTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: TEGSKMKDSSLP*RSSKCHLLPDV
Trigger: GACATCAGGGAGTAAGTGACACTTTGAACTCCTCAAGGGCAGAGAACTGTCTTTCATTTTTGAACCCTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCTCTCAAGTGCTTCAATaGACCGCCTCTCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCSQVLQ*TASPFQ
Trigger: TTGGAAAGGAGAGGCGGTTCATTGAAGCACTTGAGA...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTCTGAATGGCTGTCTTaGAGGGCTTCTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSEWLS*RASPAQ
Trigger: CTGAGCTGGAGAAGCCCTTCAAGACAGCCATTCAGA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCAGTATTGTATACACTaGTTGGGGGTTGTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCQYCIH*LGVVGP
Trigger: TGGACCGACAACCCCCAATCAGTGTATACAATACTG...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTTCTCTGGGAGTGACATaGCAAAATCATGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPSLGVT*QNHAAE
Trigger: CTCAGCTGCATGATTTTGTCATGTCACTCCCAGAGA...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CCCTCTTTCCACTGCAGTGCCATGTTCAAAACCAATGATGGTATCTGCAGCTCTATATTTCTCTGGGAGTaGCATGACAAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: PSFHCSAMFKTNDGICSSIFLWE*HDKIMQ
Trigger: CTGCATGATTTTGTCATGTCACTCCCAGAGAAATAT...AGAGCTGCAGATACCATCATTGGTTTTGAACATGGCACTGCAGTGGAAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTGCACAGAGAAGCACTaGGTGGTGGCTGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNCTEKH*VVAELP
Trigger: TGGCAGCTCAGCCACCACTCAGTGCTTCTCTGTGCA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGTGTCACTTACTCCCTaGTGTCTCACTAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPVSLTP*CLTNSH
Trigger: GTGGGAATTAGTGAGACATCAGGGAGTAAGTGACAC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGACGAGCTGCGGCAATaGCCCAAAAGCATATTTGAA +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPDELRQ*PKSIFE
Trigger: TTCAAATATGCTTTTGGGTCATTGCCGCAGCTCGTC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTAGTAGGGAGAAAACATaGTGGCAGGATAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPSREKT*WQDRLV
Trigger: CACCAACCTATCCTGCCATCATGTTTTCTCCCTACT...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATATATGTCTTCCATTGTTaGATCTTCTCTGCCATAGCG +
Preference number: 4 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHIYVFHC*IFSAIA
Trigger: CGCTATGGCAGAGAAGATGCAACAATGGAAGACATA...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGGTTCAACTTCTTCCTaGACAGGAATGTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPGSTSS*TGMSLS
Trigger: GGACAAGGACATTCCTGTGCAGGAAGAAGTTGAACC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTGTCCCGTTCACAGCTaGACCCACAGACCCTACCAG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNCPVHS*THRPYQ
Trigger: CTGGTAGGGTCTGTGGGTGCAGCTGTGAACGGGACA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAATCTTGCCCCAGCATTaGCCTGAAACCAAATTTACG +
Preference number: 4 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSILPQH*PETKFT
Trigger: CGTAAATTTGGTTTCAGGGCAATGCTGGGGCAAGAT...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GGCAATGATCATGGCCACAGTGACGTTAGTGAAGGAATTGACTATCATCCCGATAAGTCTTGTTGTCAATaGTCCAGGGCTATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GNDHGHSDVSEGIDYHPDKSCCQ*SRAISE
Trigger: CTCAGAAATAGCCCTGGAGCATTGACAACAAGACTT...ATCGGGATGATAGTCAATTCCTTCACTAACGTCACTGTGGCCATGATCATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp AAGATGACCAGGCTCAGCTTCCAGCTAAAGGAGAAGGCAATGATCATGGCCACAGTCCCATTTTTCACCTaGAGTATTGTATACACTGAT +
Preference number: 4 (lower is better)
Translates to: KMTRLSFQLKEKAMIMATVPFFT*SIVYTD
Trigger: ATCAGTGTATACAATACTGCAGGTGAAAAATGGGAC...TGTGGCCATGATCATTGCCTTCTCCTTTAGCTGGAAGCTGAGCCTGGTCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCAATCACCACCCCCTGTaGCATGACAGCAATGATATC +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCNHHPL*HDSNDI
Trigger: GATATCATTGCTGTCATGGCACAGGGGGTGGTGATT...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTTGTTTTTCTAATCACTaGATTGGCTCTGTTACTTCT +
Preference number: 4 (lower is better)
Translates to: AAGGALQFCFHTGFWSILCFSNH*IGSVTS
Trigger: AGAAGTAACAGAGCCAATGCAGTGATTAGAAAAACA...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCAGAATCCTCCTAACTaGGGCAGGTTCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCQNPPN*GRFNFF
Trigger: GAAGAAGTTGAACCTGCCCCAGTTAGGAGGATTCTG...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCACATCCTGGTCTGTGTaGCTCCTGATAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCTSWSV*LLIKPR
Trigger: TCTTGGCTTTATCAGGAGCCACACAGACCAGGATGT...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATAAACATGATGCACTaGGCAAAGGCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFINMMH*AKAKQN
Trigger: ATTCTGCTTTGCCTTTGCCCAGTGCATCATGTTTAT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp TGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCAAATGGAGCCCCTCATTaGAGATTAAGTAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: CKRRLFQELLHSVQLQRSNGAPH*RLSNLH
Trigger: ATGGAGGTTACTTAATCTCCAATGAGGGGCTCCATT...TGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439188.1
ENST00000647920.1
CDS-3UTR CCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCAGCTTTTGCATAACTTaGGGTGTAAGAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSISFCIT*GVREGS
Trigger: AGAGCCTTCTCTTACACCCCAAGTTATGCAAAAGCT...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATCAACAGCCCTAACTaGAAAGCTCATGCTAATACT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFINSPN*KAHANT
Trigger: AGTATTAGCATGAGCTTTCCAGTTAGGGCTGTTGAT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618180.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGACACTGAGGAAAATCTaGACAAGGGTTCCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLTLRKI*TRVPGV
Trigger: TACACCAGGAACCCTTGTCCAGATTTTCCTCAGTGT...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCGTAGGCACACACCATTaGTCTGTGACCTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAVGTHH*SVTFVP
Trigger: AGGAACAAAGGTCACAGATCAATGGTGTGTGCCTAC...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTGTCGGTCCAGCAGTTaGAAAAAGCGTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHCRSSS*KKRAAD
Trigger: ATCAGCTGCACGCTTTTTTCAACTGCTGGACCGACA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp AGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTACAAAAAGTAGGCACACACAGTATTGTATACACTaGTTGGGGGTTGTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: RNWVKRDTQPIATKSRHTQYCIH*LGVVGP
Trigger: TGGACCGACAACCCCCAATCAGTGTATACAATACTG...TGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCAAACGTTCCAACAGCTaGATGCTAGTGCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCKRSNS*MLVLLP
Trigger: TGGCAAAAGCACTAGCATTCAGCTGTTGGAACGTTT...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTGTTGTCTCCATACTTaGTATTGTCCATTATGCTAC +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFCCLHT*YCPLCY
Trigger: GTAGCATAATGGACAATATCAAGTATGGAGACAACA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGGTCCCTCTTTCCACTaGAGTGCCATGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHGPSFH*SAMFKT
Trigger: GGTTTTGAACATGGCACTGCAGTGGAAAGAGGGACC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGTCCCATTTTTCACCTaGAGTATTGTATACACTGAT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFVPFFT*SIVYTD
Trigger: ATCAGTGTATACAATACTGCAGGTGAAAAATGGGAC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACACAAACGCCAGTGTCTaGCCTGGACTAATCGACACT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHTNASV*PGLIDT
Trigger: AGTGTCGATTAGTCCAGGGCAGACACTGGCGTTTGT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTTTTGCCACATCCACTaGTCCCAACAAACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHFCHIH*SQQTPV
Trigger: CACTGGCGTTTGTTGGGAGCAGTGGATGTGGCAAAA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGAGTGGTGGCTGAGCTaGCACTTGACATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHEWWLS*HLTLGF
Trigger: AAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAATACTTTCCCTTTCTaGCTCCCTCAGCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHNTFPF*LPQPES
Trigger: GCTCTCAGGCTGAGGGAGGCAGAAAGGGAAAGTATT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAGGTGTTATTCACACATaGTTTTCCTGGAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSGVIHT*FSWNLE
Trigger: CTCCAGATTCCAGGAAAAGCATGTGTGAATAACACC...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTGCTGCACGTCCAGTTaGAAAGGCTTCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHCCTSS*KGFQTR
Trigger: CCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCAAGAGCCTATGCTCTTaGTCTTTGAAATGCAAACCA +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSIKSLCS*SLKCKP
Trigger: TGGTTTGCATTTCAAAGAGCAAGAGCATAGGCTCTT...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTCAGCACAAGAGCCTATaGTCTTGCTCTTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPQHKSL*SCSLKC
Trigger: GCATTTCAAAGAGCAAGAGCATAGGCTCTTGTGCTG...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAAGAAAGCTGAGACTTaGAGCGTTGCCGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHKKAET*SVAGWK
Trigger: CTTCCATCCGGCAACGCTCCAAGTCTCAGCTTTCTT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp TGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCAATAAACATGATGCACTaGGCAAAGGCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CKRRLFQELLHSVQLQRSINMMH*AKAKQN
Trigger: ATTCTGCTTTGCCTTTGCCCAGTGCATCATGTTTAT...TGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439188.1
ENST00000647920.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATGATATCCGCGTTCTaGATGGTGGACAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHMISAF*MVDKRW
Trigger: CCATCGCTTGTCCACCATCCAGAACGCGGATATCAT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAACAACACTGGTTCCTaGGAAACAATTCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFNNTGS*ETIPMF
Trigger: AAACATTGGAATTGTTTCCCAGGAACCAGTGTTGTT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAATGAAAAGGGCCATTTaGTCAGCTATGGCATCATTG +
Preference number: 4 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSMKRAI*SAMASL
Trigger: CAATGATGCCATAGCTGACCAAATGGCCCTTTTCAT...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 72 bp GTTCATACACAGCTTTACATTCAATCCCCCTGTCTCTaGTATGTTAGCTGCCCCTTCAACTTCATCTTGTGT +
Preference number: 4 (lower is better)
Translates to: VHTQLYIQSPCL*YVSCPFNFILC
Trigger: ACACAAGATGAAGTTGAAGGGGCAGCTAACATACAAGAGACAGGGGGATTGAATGTAAAGCTGTGTATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 72 bp TATATGTTAAAATACTTCCTCAGTGTCTGGTGGTCCTaGGAAGTCAATTCCCATGCAAGGAGGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: YMLKYFLSVWWS*EVNSHARRRHQ
Trigger: TTGGTGTCTCCTCCTTGCATGGGAATTGACTTCCAAGGACCACCAGACACTGAGGAAGTATTTTAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCAAGCGATGAGCAACTaGAATGATTGTGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHQAMSN*NDCVPM
Trigger: CATGGGCACACAATCATTTCAGTTGCTCATCGCTTG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATACTCTTTATCAGGAATTaGAAAAGTCCCAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHILFIRN*KSPKNL
Trigger: CAGATTCTTGGGACTTTTTCAATTCCTGATAAAGAG...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCCTCTTTATCAGGAATTaGAAAAGTCCCAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: PEERGWEFFCSYTALHSILFIRN*KSPKNL
Trigger: CAGATTCTTGGGACTTTTTCAATTCCTGATAAAGAG...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGTAGGCACACACCATTaGTCTGTGACCTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHVGTHH*SVTFVP
Trigger: AGGAACAAAGGTCACAGATCAATGGTGTGTGCCTAC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGCCCCAGCATTGCCCTaGAACCAAATTTACGTAGCC +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNAPALP*NQIYVA
Trigger: GGCTACGTAAATTTGGTTTCAGGGCAATGCTGGGGC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTCTGAATGGCTGTCTTaGAGGGCTTCTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSEWLS*RASPAQ
Trigger: CTGAGCTGGAGAAGCCCTTCAAGACAGCCATTCAGA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCAGTATTGTATACACTaGTTGGGGGTTGTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHQYCIH*LGVVGP
Trigger: TGGACCGACAACCCCCAATCAGTGTATACAATACTG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp AGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTACAAAAAGTAGGCACACATGGACTAATCGACACTaGGAGACCATTCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: RNWVKRDTQPIATKSRHTWTNRH*ETIQNL
Trigger: CAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCA...TGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp AATTCCAGCAACAGTGCGGATGTTACTGAGGGCTTCATTTGTAATCTGTCCCACTGTTGTCTCCATACTTaGTATTGTCCATTATGCTAC +
Preference number: 4 (lower is better)
Translates to: NSSNSADVTEGFICNLSHCCLHT*YCPLCY
Trigger: GTAGCATAATGGACAATATCAAGTATGGAGACAACA...GTGGGACAGATTACAAATGAAGCCCTCAGTAACATCCGCACTGTTGCTGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACACAAAATCATGCAGCTaGGCCTGTTTTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHTKSCS*ACFAAA
Trigger: AGCAGCTGCAAAACAGGCTCAGCTGCATGATTTTGT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTCTCTGGGAGTGACATaGCAAAATCATGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSLGVT*QNHAAE
Trigger: CTCAGCTGCATGATTTTGTCATGTCACTCCCAGAGA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGTGTCACTTACTCCCTaGTGTCTCACTAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHVSLTP*CLTNSH
Trigger: GTGGGAATTAGTGAGACATCAGGGAGTAAGTGACAC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTCAGTTTCCAACCCCTaGAAAATCCCAACAGGAAAC +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAASVSNP*KIPTGN
Trigger: GTTTCCTGTTGGGATTTTTCAGGGGTTGGAAACTGA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTCATAGAATCGCTGAATaGGTTGCAGTGCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPHRIAE*VAVLYF
Trigger: AAAGTACAGCACTGCAACTCATTCAGCGATTCTATG...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp TGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCATTGTTGCATCTTCTCTaGCATAGCGAATATTTTCTG +
Preference number: 4 (lower is better)
Translates to: CKRRLFQELLHSVQLQRSLLHLL*HSEYFL
Trigger: CAGAAAATATTCGCTATGGCAGAGAAGATGCAACAA...TGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGGTTCAACTTCTTCCTaGACAGGAATGTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHGSTSS*TGMSLS
Trigger: GGACAAGGACATTCCTGTGCAGGAAGAAGTTGAACC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp AGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTACAAAAAGTAGGCACACAATCTTGCCCCAGCATTaGCCTGAAACCAAATTTACG +
Preference number: 4 (lower is better)
Translates to: RNWVKRDTQPIATKSRHTILPQH*PETKFT
Trigger: CGTAAATTTGGTTTCAGGGCAATGCTGGGGCAAGAT...TGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp TGTCAAATTGCTAGATGGAAGGTGACACCAGTCATGAAGGGAAAAGAATTTGATTGCACTCAGTACAACTaGAGAGATCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: CQIARWKVTPVMKGKEFDCTQYN*RDHPEH
Trigger: GTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCA...ATCAAATTCTTTTCCCTTCATGACTGGTGTCACCTTCCATCTAGCAATTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAGACCATTCAGAACTTaGGAGTCAGGTCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHRPFRT*ESGREG
Trigger: TCCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAGCCTGTTTTGCAGCTaGTATGACTCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSLFCS*YDSFHG
Trigger: CCCATGGAAAGAGTCATAGCAGCTGCAAAACAGGCT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCTATTGTCTCAAAAATaGTGGTGGCTGCTGCACGTC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLLSQK*WWLLHV
Trigger: GACGTGCAGCAGCCACCAGCATTTTTGAGACAATAG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCTTTCCTTTCTCCAGCTaGCCTATTGTTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCFPFSS*PIVAFA
Trigger: AGCAAAAGCAACAATAGGGCAGCTGGAGAAAGGAAA...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCAGAATCCTCCTAACTaGGGCAGGTTCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHQNPPN*GRFNFF
Trigger: GAAGAAGTTGAACCTGCCCCAGTTAGGAGGATTCTG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATTGTATACACTGATTaGGGGTTGTCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHIVYTD*GLSVQQ
Trigger: CTGCTGGACCGACAACCCCCAATCAGTGTATACAAT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATAAAATCAATCTTCCCCTaGAAGTTGTCCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHIKSIFP*KLSHFS
Trigger: TGAAAAATGGGACAACTTCCAGGGGAAGATTGATTT...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATAGGTCCGACCCTCTCTaGCTTTGTCTAGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNRSDPL*LCLEQP
Trigger: AGGTTGCTCTAGACAAAGCCAGAGAGGGTCGGACCT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTATCCGCGTTCTGGATaGTGGACAAGCGATGGGCAA +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNYPRSG*WTSDGQ
Trigger: TTGCCCATCGCTTGTCCACCATCCAGAACGCGGATA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp TGTCAAATTGCTAGATGGAAGGTGACACCAGTCATGAAGGGAAAAGAATTTGATGCCATCAGTTCTTCATaGGTCCCCTTTTCAATCACC +
Preference number: 4 (lower is better)
Translates to: CQIARWKVTPVMKGKEFDAISSS*VPFSIT
Trigger: GGTGATTGAAAAGGGGACCCATGAAGAACTGATGGC...ATCAAATTCTTTTCCCTTCATGACTGGTGTCACCTTCCATCTAGCAATTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCCATATTAATCAGGACTaGCTCCTGCACAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAHINQD*LLHREA
Trigger: TGCTTCTCTGTGCAGGAGCCAGTCCTGATTAATATG...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTCCAAGATTTTGCAGGTaGCATCACTGTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPPRFCR*HHCVFF
Trigger: GAAGAAAACACAGTGATGCCACCTGCAAAATCTTGG...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCTGACATGCAGTCAATaGTGGGTTTCCTGTCTATTG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLTCSQ*WVSCLL
Trigger: CAATAGACAGGAAACCCATCATTGACTGCATGTCAG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGGTCCCTCTTTCCACTaGAGTGCCATGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNGPSFH*SAMFKT
Trigger: GGTTTTGAACATGGCACTGCAGTGGAAAGAGGGACC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTTGCCCCAGCATTaGCCTGAAACCAAATTTACG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHILPQH*PETKFT
Trigger: CGTAAATTTGGTTTCAGGGCAATGCTGGGGCAAGAT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATACCATCTCCAGGGCCTaGTTATCTCGAGAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNTISRA*LSREAN
Trigger: ATTTGCCTCTCGAGATAAGCAGGCCCTGGAGATGGT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTTTTGCCACATCCACTaGTCCCAACAAACGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNFCHIH*SQQTPV
Trigger: CACTGGCGTTTGTTGGGAGCAGTGGATGTGGCAAAA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGAGTGGTGGCTGAGCTaGCACTTGACATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNEWWLS*HLTLGF
Trigger: AAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTAACAAGGAGAGGCATTaGCAAGATTTAAAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPNKERH*QDLKLL
Trigger: TAGGAGCTTTAAATCTTGGCAATGCCTCTCCTTGTT...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTGGAGCGTTGCCGGATaGAAGCCCTTAAACTATCCT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNWSVAG*KPLNYP
Trigger: AGGATAGTTTAAGGGCTTCCATCCGGCAACGCTCCA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CATGGGAATTTCTTTGGTGTTGTCTCCATACTTGATATTGTCCATTATGCTACAACAGGCAAACAACACTaGTTCCACCTTCCCTTGATC +
Preference number: 4 (lower is better)
Translates to: HGNFFGVVSILDIVHYATTGKQH*FHLPLI
Trigger: GATCAAGGGAAGGTGGAACCAGTGTTGTTTGCCTGT...TGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATATGATATCCGCGTTCTaGATGGTGGACAAGCGATGG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNMISAF*MVDKRW
Trigger: CCATCGCTTGTCCACCATCCAGAACGCGGATATCAT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCATATTAATCAGGACTaGCTCCTGCACAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHHINQD*LLHREA
Trigger: TGCTTCTCTGTGCAGGAGCCAGTCCTGATTAATATG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCATGGAAGGTCACATTATaGAATTCAATTTCACCCTTG +
Preference number: 4 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSWKVTL*NSISPL
Trigger: CAAGGGTGAAATTGAATTCCATAATGTGACCTTCCA...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATAGAGAGCGAATGTCATaGCCATCCACGGTCACCATT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNRERMS*PSTVTI
Trigger: AATGGTGACCGTGGATGGCCATGACATTCGCTCTCT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATCAGTATTGTATACACTaGTTGGGGGTTGTCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNQYCIH*LGVVGP
Trigger: TGGACCGACAACCCCCAATCAGTGTATACAATACTG...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTGCGTCATGTGTGTCTaGGATTCTTGCATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNCVMCV*DSCIGS
Trigger: TGACCCAATGCAAGAATCTCAGACACACATGACGCA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATACAGTTCTCTGCCCTTaGGGAGTTCAAAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNTVLCP*GVQSVT
Trigger: AGTGACACTTTGAACTCCTCAAGGGCAGAGAACTGT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATCCGAGGGTTCAAAAATaGAAGACAGTTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNPRVQK*KTVLCP
Trigger: AGGGCAGAGAACTGTCTTTCATTTTTGAACCCTCGG...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTCAAGAAACGTTTGTTaGTTGCCTGTTATAGACCCG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSRNVC*LPVIDP
Trigger: CGGGTCTATAACAGGCAATCAACAAACGTTTCTTGA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAAGTCTTGTTGTCAATaGTCCAGGGCTATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHKSCCQ*SRAISE
Trigger: CTCAGAAATAGCCCTGGAGCATTGACAACAAGACTT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATAGCCTGTTTTGCAGCTaGTATGACTCTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSLFCS*YDSFHG
Trigger: CCCATGGAAAGAGTCATAGCAGCTGCAAAACAGGCT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp TGTCAAATTGCTAGATGGAAGGTGACACCAGTCATGAAGGGAAAAGAATTTGATTTGTCTAGAGCAACCTaGACCGTCTTTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: CQIARWKVTPVMKGKEFDLSRAT*TVFSLS
Trigger: AGAAAGTGAAAAGACGGTGCAGGTTGCTCTAGACAA...ATCAAATTCTTTTCCCTTCATGACTGGTGTCACCTTCCATCTAGCAATTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR GCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTTGTCTAGAGCAACCTaGACCGTCTTTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLSRAT*TVFSLS
Trigger: AGAAAGTGAAAAGACGGTGCAGGTTGCTCTAGACAA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATACATCCTGGTCTGTGTaGCTCCTGATAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNTSWSV*LLIKPR
Trigger: TCTTGGCTTTATCAGGAGCCACACAGACCAGGATGT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTAACAACACTGGTTCCTaGGAAACAATTCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPNNTGS*ETIPMF
Trigger: AAACATTGGAATTGTTTCCCAGGAACCAGTGTTGTT...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGTTAAGAAACACAGCTaGTCTTCAGTCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHVKKHS*SSVLLF
Trigger: GAACAGAAGGACTGAAGACCAGCTGTGTTTCTTAAC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAACCATCAAGAATTCTaGCCTGACCAGTTAACTTGC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHNHQEF*PDQLTC
Trigger: GCAAGTTAACTGGTCAGGCCAGAATTCTTGATGGTT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 72 bp TTCTCTCATCTTGTAACTCTATTATCAATTGTCCATTaGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: FSHLVTLLSIVH*LSGSQDFAGGI
Trigger: GATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATGGACAATTGATAATAGAGTTACAAGATGAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGCAAAGTCACTAGAGTaGAGTAAACACCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHAKSLE*SKHLSF
Trigger: AAAGGAAAGGTGTTTACTTCACTCTAGTGACTTTGC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTCTTCATTAAGAGCTTaGTTTCCCTGGCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSSLRA*FPWLCK
Trigger: TTTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTGGACTAATCGACACTaGGAGACCATTCAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNWTNRH*ETIQNL
Trigger: CAAGTTCTGAATGGTCTCTCAGTGTCGATTAGTCCA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTGTTGTCTCCATACTTaGTATTGTCCATTATGCTAC +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAACCLHT*YCPLCY
Trigger: GTAGCATAATGGACAATATCAAGTATGGAGACAACA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATATTTCTCTGGGAGTaGCATGACAAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHIFLWE*HDKIMQ
Trigger: CTGCATGATTTTGTCATGTCACTCCCAGAGAAATAT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTGTTCTTTTCAAATCTaGCCTTGGTCTAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHCSFQI*PWSSSR
Trigger: TCTTGAGCTAGACCAAGGTCAGATTTGAAAAGAACA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGAAAACCGAAACAATTaGAAGAAGCCAACTCTAACG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHENRNN*KKPTLT
Trigger: CGTTAGAGTTGGCTTCTTTCAATTGTTTCGGTTTTC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCATTCAATTTCACCCTTaGTTCGATCCAACTTGTAAC +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAIQFHP*FDPTCN
Trigger: GTTACAAGTTGGATCGAATCAAGGGTGAAATTGAAT...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTATGCTCTTGCTCTTTaGAATGCAAACCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAYALAL*NANQNK
Trigger: CTTGTTTTGGTTTGCATTTCAAAGAGCAAGAGCATA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR GCA 90 bp AGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTACAAAAAGTAGGCACACAATAGCGAATATTTTCTaGAATGGTGGTAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: RNWVKRDTQPIATKSRHTIANIF*NGGREQ
Trigger: CTGTTCTCTACCACCATTGCAGAAAATATTCGCTAT...TGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATACAGGCAAACAACACTaGTTCCTGGGAAACAATTCC +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNTGKQH*FLGNNS
Trigger: GGAATTGTTTCCCAGGAACCAGTGTTGTTTGCCTGT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGGTGTCAAATTGCTGTaGCAGGTCCATGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNGVKLL*QVHDEV
Trigger: AACTTCATCATGGACCTGCCACAGCAATTTGACACC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 72 bp CTTTCCATGGGAATTTCTTTGGTGTTGTCTCCATACTaGATATTGTCCATTATGCTACAGGCAAACAACACT +
Preference number: 4 (lower is better)
Translates to: LSMGISLVLSPY*ILSIMLQANNT
Trigger: AGTGTTGTTTGCCTGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATGGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
3UTR CAA 72 bp TCTAAAAGGCATCTTTACTCTGCAACTTACTCGTCATaGCCATTTTTCATAACCAGAATGCATTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SKRHLYSATYSS*PFFITRMHSFT
Trigger: GGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGTTGCAGAGTAAAGATGCCTTTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CATGGGAATTTCTTTGGTGTTGTCTCCATACTTGATATTGTCCATTATGCTACATCTTCATTAAGAGCTTaGTTTCCCTGGCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: HGNFFGVVSILDIVHYATSSLRA*FPWLCK
Trigger: TTTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGA...TGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCTCTTTATCAGGAATTaGAAAAGTCCCAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLFIRN*KSPKNL
Trigger: CAGATTCTTGGGACTTTTTCAATTCCTGATAAAGAG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTGTTGTCTCCATACTTaGTATTGTCCATTATGCTAC +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHCCLHT*YCPLCY
Trigger: GTAGCATAATGGACAATATCAAGTATGGAGACAACA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATAACAATTCCAATGTTTaGGCGGAGGAACTGGACATT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNNNSNV*AEELDI
Trigger: AATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTCAAGAAACGTTTGTTaGTTGCCTGTTATAGACCCG +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSRNVC*LPVIDP
Trigger: CGGGTCTATAACAGGCAATCAACAAACGTTTCTTGA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGCAGGGGCAAATGAGTaGTTTTCTGCCATATTTACT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNAGANE*FSAIFT
Trigger: AGTAAATATGGCAGAAAAGCACTCATTTGCCCCTGC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CCA 90 bp CATGGGAATTTCTTTGGTGTTGTCTCCATACTTGATATTGTCCATTATGCTACAAAAGAAATATCCCTGTaGCAGGTCCATGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: HGNFFGVVSILDIVHYATKEISL*QVHDEV
Trigger: AACTTCATCATGGACCTGCCACAGGGATATTTCTTT...TGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAAATCAATCTTCCCCTaGAAGTTGTCCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHKSIFP*KLSHFS
Trigger: TGAAAAATGGGACAACTTCCAGGGGAAGATTGATTT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTGTCTAAGGCAGAAGTaGCTTCATCTAGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNCLRQK*LHLVAR
Trigger: TCTTGCTACTAGATGAAGCCACTTCTGCCTTAGACA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAACAACACTGGTTCCTaGGAAACAATTCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHNNTGS*ETIPMF
Trigger: AAACATTGGAATTGTTTCCCAGGAACCAGTGTTGTT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCAGAATTTCGTTTGTTaGCTAAGGGAAGAAAAACCA +
Preference number: 4 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHQNFVC*LREEKP
Trigger: TGGTTTTTCTTCCCTTAGCCAACAAACGAAATTCTG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
3UTR CAA 72 bp TCTAATTTCCTTTCTCCAGCTGCCCTATTGTTGCTTTaGCTTTATATGTTAAAATACTTCCTCAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SNFLSPAALLLL*LYMLKYFLSVW
Trigger: CCAGACACTGAGGAAGTATTTTAACATATAAAGCAAAAGCAACAATAGGGCAGCTGGAGAAAGGAAATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR TCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTCTTCATTAAGAGCTTaGTTTCCCTGGCTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSSLRA*FPWLCK
Trigger: TTTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATATCAACAGCCCTAACTaGAAAGCTCATGCTAATACT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNINSPN*KAHANT
Trigger: AGTATTAGCATGAGCTTTCCAGTTAGGGCTGTTGAT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618180.1
ENST00000650372.1
CDS-3UTR GCA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGTCCCATTTTTCACCTaGAGTATTGTATACACTGAT +
Preference number: 4 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNVPFFT*SIVYTD
Trigger: ATCAGTGTATACAATACTGCAGGTGAAAAATGGGAC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCTGGCTGAGCTGCCACTaGACATTGGGTTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCWLSCH*TLGFPS
Trigger: TGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCA...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCCTGCTGCAGGCGGGGCTCTGCAAACAAGGAGAGGCATaGCCAAGATTTAAAGCTCCT +
Preference number: 5 (lower is better)
Translates to: VSRWNWGKAAILLQAGLCKQGEA*PRFKAP
Trigger: AGGAGCTTTAAATCTTGGCAATGCCTCTCCTTGTTT...GCAGAGCCCCGCCTGCAGCAGGATGGCTGCCTTTCCCCAGTTCCAGCGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp TGCACCCACAGACCCTACCAGCATGTAGGGCCATTCTGGAGCACTGAATTTCAGGGCAGCCCCTTGAACTaGGGAAGCATCTGTAGCAAG +
Preference number: 5 (lower is better)
Translates to: CTHRPYQHVGPFWSTEFQGSPLN*GSICSK
Trigger: CTTGCTACAGATGCTTCCCAAGTTCAAGGGGCTGCC...CTGAAATTCAGTGCTCCAGAATGGCCCTACATGCTGGTAGGGTCTGTGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAGAGCCGGCAGCCCCTaGAACTTGGGAAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGRAGSP*NLGSIC
Trigger: ACAGATGCTTCCCAAGTTCAAGGGGCTGCCGGCTCT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAGGCAGCCCCTTGAACTaGGGAAGCATCTGTAGCAAG +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGGSPLN*GSICSK
Trigger: CTTGCTACAGATGCTTCCCAAGTTCAAGGGGCTGCC...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTATGGCTTCACTCTCATaGTCCAGAGCTGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: CVSEILALGQLMGDPVVTMASLS*SRAEVA
Trigger: GGCCACCTCAGCTCTGGACAATGAGAGTGAAGCCAT...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GCTCCCTCTGCTAAAGGTCCTCGCAAGCATGTCATCTTCAGTTGCATCCTTTATAGAGCCGGCAGCCCCTaGAACTTGGGAAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: APSAKGPRKHVIFSCILYRAGSP*NLGSIC
Trigger: ACAGATGCTTCCCAAGTTCAAGGGGCTGCCGGCTCT...ATAAAGGATGCAACTGAAGATGACATGCTTGCGAGGACCTTTAGCAGAGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAGAGACCATTCAGAACTaGCGAGTCAGGTCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGETIQN*RVRSRR
Trigger: CCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCTC...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCCGACCCTCTCTGGCTTaGTCTAGAGCAACCTGCACC +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFRPSLA*SRATCT
Trigger: GGTGCAGGTTGCTCTAGACAAAGCCAGAGAGGGTCG...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATGGCTGAGCTGCCACTaGACATTGGGTTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGWLSCH*TLGFPS
Trigger: TGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTGAACAGAACTGGCTCTaGCTCCACTATCCCAATCTG +
Preference number: 5 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSEQNWL*LHYPNL
Trigger: CAGATTGGGATAGTGGAGCAAGAGCCAGTTCTGTTC...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATGGCTTCACTCTCATaGTCCAGAGCTGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFMASLS*SRAEVA
Trigger: GGCCACCTCAGCTCTGGACAATGAGAGTGAAGCCAT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCCAAGAAGGGGAAGAAGCACAAGATGACCAGGCTCAGCTTCCAGCTAAAGGACTTACTCAGCACTTCTaGCACCATGGCTTCACTCTC +
Preference number: 5 (lower is better)
Translates to: SQEGEEAQDDQAQLPAKGLTQHF*HHGFTL
Trigger: GAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAG...TCCTTTAGCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCCCCTTCTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACTTACTCAGCACTTCTaGCACCATGGCTTCACTCTC +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGLTQHF*HHGFTL
Trigger: GAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAAACCAGGCAATATCTaGCCCCAGCATTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGKPGNI*PQHCPE
Trigger: TTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTTT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTCCAAACCTCTTCCAAGAGCTGTaGCACTCAGTACAACTGCAG +
Preference number: 5 (lower is better)
Translates to: GSSKSCCTQYNCRDHPPNLFQEL*HSVQLQ
Trigger: CTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAG...GTTTGGAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647920.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATACACTGATTGGGGGTaGTCGGTCCAGCAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGYTDWG*SVQQLK
Trigger: TTTCAACTGCTGGACCGACAACCCCCAATCAGTGTA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp TCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTGAACACATACGACCCTCTCTGGCTTaGTCTAGAGCAACCTGCACC +
Preference number: 5 (lower is better)
Translates to: SSKSCCTQYNCRDHPEHIRPSLA*SRATCT
Trigger: GGTGCAGGTTGCTCTAGACAAAGCCAGAGAGGGTCG...TATGTGTTCAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTAGCTCCCCCACTGAATaGCAGTCAAACCACCCTATT +
Preference number: 5 (lower is better)
Translates to: AAGGALQFCFHTGFWSILSSPTE*QSNHPI
Trigger: AATAGGGTGGTTTGACTGCAATTCAGTGGGGGAGCT...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTCGTCTGCCTCCTGACTaGGCAACCATCAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSRLPPD*ATIKNS
Trigger: AGAATTCTTGATGGTTGCCAAGTCAGGAGGCAGACG...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGGGCGATAGCTACCCTTaGTTTCTGGCCACCACTCAT +
Preference number: 5 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLGDSYP*FLATTH
Trigger: ATGAGTGGTGGCCAGAAACAAAGGGTAGCTATCGCC...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp AAGATGACCAGGCTCAGCTTCCAGCTAAAGGAGAAGGCAATGATCATGGCCACACTCTTCCAAGAGCTGTaGCACTCAGTACAACTGCAG +
Preference number: 5 (lower is better)
Translates to: KMTRLSFQLKEKAMIMATLFQEL*HSVQLQ
Trigger: CTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAG...TGTGGCCATGATCATTGCCTTCTCCTTTAGCTGGAAGCTGAGCCTGGTCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp AAGATGACCAGGCTCAGCTTCCAGCTAAAGGAGAAGGCAATGATCATGGCCACATACACTGATTGGGGGTaGTCGGTCCAGCAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: KMTRLSFQLKEKAMIMATYTDWG*SVQQLK
Trigger: TTTCAACTGCTGGACCGACAACCCCCAATCAGTGTA...TGTGGCCATGATCATTGCCTTCTCCTTTAGCTGGAAGCTGAGCCTGGTCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAATCTTCCCCTGGAAGTaGTCCCATTTTTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGIFPWK*SHFSPA
Trigger: TGCAGGTGAAAAATGGGACAACTTCCAGGGGAAGAT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGAGACCATTCAGAACTaGCGAGTCAGGTCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFETIQN*RVRSRR
Trigger: CCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCTC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCCTCAGAGAGGGAGTATGCAGTTTCTCGCTGGAACTGGGGAAAGGCAGCCATCTCCATACTTGATATaGTCCATTATGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: PPQRGSMQFLAGTGERQPSPYLI*SIMLQA
Trigger: TGCCTGTAGCATAATGGACAATATCAAGTATGGAGA...TGGCTGCCTTTCCCCAGTTCCAGCGAGAAACTGCATACTCCCTCTCTGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGAAGCTGCCACTTGACATaGGGTTTTCCCTCATATGGA +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGSCHLT*GFPSYG
Trigger: TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCT...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTAGCTGCCACTTGACATaGGGTTTTCCCTCATATGGA +
Preference number: 5 (lower is better)
Translates to: AAGGALQFCFHTGFWSILSCHLT*GFPSYG
Trigger: TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCT...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTGGCTGAGCTGCCACTaGACATTGGGTTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFWLSCH*TLGFPS
Trigger: TGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS GCA 90 bp AATGATGGGTTTCCTGTCTATTGTCTCAAAAATGCTGGTGGCTGCTaGACGTCCAGTTGCAAAGGCTTCCAAACAAGGAGAGGCATTGCC +
Preference number: 5 (lower is better)
Translates to: NDGFPVYCLKNAGGC*TSSCKGFQTRRGIA
Trigger: GGCAATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGACAATAGACAGGAAACCCATCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS GCA 90 bp CTGCACAAAGGATGTTCAGGAATCAGGCTGAATATCTTCCTGCTCTaGCATCTGTGGTGTGTGGCTTTTGTCCAAGTGATCACAGCATGG +
Preference number: 5 (lower is better)
Translates to: LHKGCSGIRLNIFLL*HLWCVAFVQVITAW
Trigger: CCATGCTGTGATCACTTGGACAAAAGCCACACACCACAGATGGCAGAGCAGGAAGATATTCAGCCTGATTCCTGAACATCCTTTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648875.1
CDS-3UTR CAA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAATGGCTTCACTCTCATaGTCCAGAGCTGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSMASLS*SRAEVA
Trigger: GGCCACCTCAGCTCTGGACAATGAGAGTGAAGCCAT...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CTTTTCAATCACCACCCCCTGTGCCATGACAGCAATGATATCCGCGTTCTGGATAGTAGGCACACACCATaGATCTGTGACCTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LFNHHPLCHDSNDIRVLDSRHTP*ICDLCS
Trigger: GGAACAAAGGTCACAGATCAATGGTGTGTGCCTACT...ATCCAGAACGCGGATATCATTGCTGTCATGGCACAGGGGGTGGTGATTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTAGAGCCGGCAGCCCCTaGAACTTGGGAAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPRAGSP*NLGSIC
Trigger: ACAGATGCTTCCCAAGTTCAAGGGGCTGCCGGCTCT...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCCTCTTCCAAGAGCTGTaGCACTCAGTACAACTGCAG +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFLFQEL*HSVQLQ
Trigger: CTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAG...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTGAGACCATTCAGAACTaGCGAGTCAGGTCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: KTTPVTGASCVSEILALGETIQN*RVRSRR
Trigger: CCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCTC...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp TGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGATGGTTCCACCTTCCCTaGATCAGGATCATAGAAACG +
Preference number: 5 (lower is better)
Translates to: WGVREGSSKSCCTQYNCRWFHLP*IRIIET
Trigger: CGTTTCTATGATCCTGATCAAGGGAAGGTGGAACCA...TCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCCATGGGAATTTCTTaGGTGTTGTCTCCATACTTG +
Preference number: 5 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHSMGIS*VLSPYL
Trigger: CAAGTATGGAGACAACACCAAAGAAATTCCCATGGA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTTCTGAGATTCTTGCATaGGGTCAACTGATGGGGGAT +
Preference number: 5 (lower is better)
Translates to: CVSEILALGQLMGDPVVTSEILA*GQLMGD
Trigger: ATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGA...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATCTCAAGAAACGTTTGTaGATTGCCTGTTATAGACCC +
Preference number: 5 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHLKKRL*IACYRP
Trigger: GGGTCTATAACAGGCAATCAACAAACGTTTCTTGAG...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp TCCTGCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTTTGTCATGTTCTGGTaGAGGGAACTGTTAGTCCAT +
Preference number: 5 (lower is better)
Translates to: SCCRRGSAILFPYRLLVHFVMFW*RELLVH
Trigger: ATGGACTAACAGTTCCCTCAACCAGAACATGACAAA...ATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GAACCGTGGGTGCAGTCCTGCTCCCAAGGTTTTCATTTCTGTGACAAGAGCTCTTATCATCAGAGAATCTaGTATTCAGCTCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: EPWVQSCSQGFHFCDKSSYHQRI*YSAPPL
Trigger: CAGTGGGGGAGCTGAATACAAGATTCTCTGATGATA...AGAGCTCTTGTCACAGAAATGAAAACCTTGGGAGCAGGACTGCACCCACGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTCATTCTGTGGTGTTTaGAGGGAGCAGGGGCAAATG +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSFCGV*REQGQM
Trigger: CATTTGCCCCTGCTCCCTCAAAACACCACAGAATGA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCCTGGCTCCCAAGATTTaGCAGGTGGCATCACTGTGT +
Preference number: 5 (lower is better)
Translates to: PEERGWEFFCSYTALHSILAPKI*QVASLC
Trigger: ACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAG...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCCAAGGACGGAGTCCTaGACCTCTTTTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: AAGGALQFCFHTGFWSILPRTES*TSFLFL
Trigger: AAGAAAAAGAAAAGAGGTCAAGGACTCCGTCCTTGG...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS GCA 90 bp GTCAATGATGGGTTTCCTGTCTATTGTCTCAAAAATGCTGGTGGCTaGTGCACGTCCAGTTGCAAAGGCTTCCAAACAAGGAGAGGCATT +
Preference number: 5 (lower is better)
Translates to: VNDGFPVYCLKNAGG*CTSSCKGFQTRRGI
Trigger: AATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGACAATAGACAGGAAACCCATCATTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp ATAACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACGAACAGAACTGGCTCTaGCTCCACTATCCCAATCTG +
Preference number: 5 (lower is better)
Translates to: ITWGVREGSSKSCCTQYNEQNWL*LHYPNL
Trigger: CAGATTGGGATAGTGGAGCAAGAGCCAGTTCTGTTC...GTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTCTTCATTAAGAGCTaGATTTCCCTGGCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: AAGGALQFCFHTGFWSILLFIKS*ISLALQ
Trigger: TTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGAG...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCCAAGAAGGGGAAGAAGCACAAGATGACCAGGCTCAGCTTCCAGCTAAAGGATGCACAGGAATGTCCTaGTCCTTTCTATCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SQEGEEAQDDQAQLPAKGCTGMS*SFLSSS
Trigger: TGAAGAAGATAGAAAGGACAAGGACATTCCTGTGCA...TCCTTTAGCTGGAAGCTGAGCCTGGTCATCTTGTGCTTCTTCCCCTTCTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp TGTGTGTCTGAGATTCTTGCATTGGGTCAACTGATGGGGGATCCAGTGGTGACTGAGATACACAGCCCATaGCTACAAAAAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: CVSEILALGQLMGDPVVTEIHSP*LQKVGT
Trigger: TGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTC...AGTCACCACTGGATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGGCAGCCCCTTGAACTaGGGAAGCATCTGTAGCAAG +
Preference number: 5 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPGSPLN*GSICSK
Trigger: CTTGCTACAGATGCTTCCCAAGTTCAAGGGGCTGCC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGATTTTCACCTGCAGTATaGTATACACTGATTGGGGGT +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGFSPAV*YTLIGG
Trigger: ACCCCCAATCAGTGTATACAATACTGCAGGTGAAAA...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATCTTCCCCTGGAAGTaGTCCCATTTTTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFIFPWK*SHFSPA
Trigger: TGCAGGTGAAAAATGGGACAACTTCCAGGGGAAGAT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp AAAAGCAGAATCTTGGGATTTCGGATGAGGGCTCTGGCGATAGCTACCCTTTGTAGCAATAGCAATGCGTaGTTTCTCCCCTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: KSRILGFRMRALAIATLCSNSNA*FLPSRE
Trigger: CTCTCTAGAGGGGAGAAACAACGCATTGCTATTGCT...ACAAAGGGTAGCTATCGCCAGAGCCCTCATCCGAAATCCCAAGATTCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAGCAATAGCAATGCGTaGTTTCTCCCCTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSNSNA*FLPSRE
Trigger: CTCTCTAGAGGGGAGAAACAACGCATTGCTATTGCT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCCGACCCTCTCTGGCTTaGTCTAGAGCAACCTGCACC +
Preference number: 5 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAARPSLA*SRATCT
Trigger: GGTGCAGGTTGCTCTAGACAAAGCCAGAGAGGGTCG...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGGTAGTAGGCTCCTTTTaGGGCCATCAGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: NLGCKRRLFQELLHSVQLVVGSF*GHQFFM
Trigger: CATGAAGAACTGATGGCCCAAAAAGGAGCCTACTAC...CAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGTAGTAGGCTCCTTTTaGGGCCATCAGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFVVGSF*GHQFFM
Trigger: CATGAAGAACTGATGGCCCAAAAAGGAGCCTACTAC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTGCAGAATTTCGTTTGTaGGCTAAGGGAAGAAAAACC +
Preference number: 5 (lower is better)
Translates to: AAGGALQFCFHTGFWSILAEFRL*AKGRKT
Trigger: GGTTTTTCTTCCCTTAGCCAACAAACGAAATTCTGC...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp TTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGGCGATAGCTACCCTTaGTTTCTGGCCACCACTCAT +
Preference number: 5 (lower is better)
Translates to: LLVIAIFHNQNAFLHRLPGDSYP*FLATTH
Trigger: ATGAGTGGTGGCCAGAAACAAAGGGTAGCTATCGCC...AGGCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTTCCAAAAGCAGAATCTaGGGATTTCGGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: KTTPVTGASCVSEILALGSKSRI*GFRMRA
Trigger: AGCCCTCATCCGAAATCCCAAGATTCTGCTTTTGGA...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GCAAAGGCATATCCCTGTAGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTAAACCAGGCAATATCTaGCCCCAGCATTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: AKAYPCRNWVKRDTQPIAKPGNI*PQHCPE
Trigger: TTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTTT...AGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGGGATATGCCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GGCTCTTCCAAGAGCTGTTGCACTCAGTACAACTGCAGAGATCACCCTCCAAACCCTCCAAACCTTTATTaGACCACAATAGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GSSKSCCTQYNCRDHPPNPPNLY*TTIASF
Trigger: AAAGGAAGCTATTGTGGTCAAATAAAGGTTTGGAGG...GTTTGGAGGGTGATCTCTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647920.1
CDS-3UTR CAA 90 bp GTGTCTCTAAGTGCAAACCTCCCTGTGAGCCTCCTCAGAGAGGGAGTATGCAGTAGAAAACCGAAACAATaGAAAGAAGCCAACTCTAAC +
Preference number: 5 (lower is better)
Translates to: VSLSANLPVSLLREGVCSRKPKQ*KEANSN
Trigger: GTTAGAGTTGGCTTCTTTCAATTGTTTCGGTTTTCT...ACTGCATACTCCCTCTCTGAGGAGGCTCACAGGGAGGTTTGCACTTAGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp ACTTACTCGTCATTGCCATTTTTCATAACCAGAATGCATTCCTTCACCGTCTGCCTGCTGCACGTCCAGTaGCAAAGGCTTCCAAACAAG +
Preference number: 5 (lower is better)
Translates to: TYSSLPFFITRMHSFTVCLLHVQ*QRLPNK
Trigger: CTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAG...GCAGACGGTGAAGGAATGCATTCTGGTTATGAAAAATGGCAATGACGAGTAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACAGTGTTTTTACATCTaGAAACTTTCTAGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGQCFYI*KLSRGL
Trigger: CAGACCCCTAGAAAGTTTCAAGATGTAAAAACACTG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGCATGTCATCTTCAGTaGCATCCTTTATGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFACHLQ*HPLCPL
Trigger: AAGAGGACATAAAGGATGCAACTGAAGATGACATGC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTGCACAGGAATGTCCTaGTCCTTTCTATCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFCTGMS*SFLSSS
Trigger: TGAAGAAGATAGAAAGGACAAGGACATTCCTGTGCA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTCCCTCTGCTAAAGGTCCTCGCAAGCATGTCATCTTCAGTTGCATCCTTTATTTTTCACCTGCAGTATaGTATACACTGATTGGGGGT +
Preference number: 5 (lower is better)
Translates to: APSAKGPRKHVIFSCILYFSPAV*YTLIGG
Trigger: ACCCCCAATCAGTGTATACAATACTGCAGGTGAAAA...ATAAAGGATGCAACTGAAGATGACATGCTTGCGAGGACCTTTAGCAGAGGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GAAGTTGTCCCATTTTTCACCTGCAGTATTGTATACACTGATTGGGGGTTGTCGATCTTCCCCTGGAAGTaGTCCCATTTTTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: EVVPFFTCSIVYTDWGLSIFPWK*SHFSPA
Trigger: TGCAGGTGAAAAATGGGACAACTTCCAGGGGAAGAT...CGACAACCCCCAATCAGTGTATACAATACTGCAGGTGAAAAATGGGACAACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGAGCAATAGCAATGCGTaGTTTCTCCCCTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLSNSNA*FLPSRE
Trigger: CTCTCTAGAGGGGAGAAACAACGCATTGCTATTGCT...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AGCACTGAGTGGTGGCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCATTAGAAATTAGCTaGGATTCCGATGTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: STEWWLSCHLTLGFPSYGPLEIS*DSDVGK
Trigger: TTTTCCTACATCGGAATCCAAGCTAATTTCTAATGG...TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGCCACCACTCAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCAAACAATTCCAATGTTaGAGCGGAGGAACTGGACAT +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFKQFQC*SGGTGH
Trigger: ATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTTT...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGCAGGCGGGGCTCTGCAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTGGTTTAATGACCATGTaGAGGTCATTTAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: AAGGALQFCFHTGFWSILGLMTM*RSFRIF
Trigger: GAAGATTCTAAATGACCTCAACATGGTCATTAAACC...AAGAATGGACCAAAAGCCTGTATGGAAACAGAATTGCAGAGCCCCGCCTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp AAAACAACCCCTGTAACTGGTGCGTCATGTGTGTCTGAGATTCTTGCATTGGGTCTCTTCATTAAGAGCTaGATTTCCCTGGCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: KTTPVTGASCVSEILALGLFIKS*ISLALQ
Trigger: TTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGAG...ACCCAATGCAAGAATCTCAGACACACATGACGCACCAGTTACAGGGGTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAGAGATACACAGCCCATaGCTACAAAAAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSEIHSP*LQKVGT
Trigger: TGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTC...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTACACTGATTGGGGGTaGTCGGTCCAGCAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAYTDWG*SVQQLK
Trigger: TTTCAACTGCTGGACCGACAACCCCCAATCAGTGTA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGAGACCATTCAGAACTaGCGAGTCAGGTCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHETIQN*RVRSRR
Trigger: CCTTCTCGACCTGACTCGCAAGTTCTGAATGGTCTC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp TGTGCCCATGCTGAATCTTACTCAGCACTTCTTGCACCATGGCTTCACTCTCATTCTCCATACTTGATATaGTCCATTATGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: CAHAESYSALLAPWLHSHSPYLI*SIMLQA
Trigger: TGCCTGTAGCATAATGGACAATATCAAGTATGGAGA...ATGAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAGATTCAGCATGGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCTCTCCATACTTGATATaGTCCATTATGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFSPYLI*SIMLQA
Trigger: TGCCTGTAGCATAATGGACAATATCAAGTATGGAGA...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCAGAAGAGAGGGGCTGGGAGTTCTTCTGTTCATACACAGCTTTACATTCAATCTATCATCACCTTCCCTaGATCAGGATCATAGAAACG +
Preference number: 5 (lower is better)
Translates to: PEERGWEFFCSYTALHSIYHHLP*IRIIET
Trigger: CGTTTCTATGATCCTGATCAAGGGAAGGTGATGATA...GATTGAATGTAAAGCTGTGTATGAACAGAAGAACTCCCAGCCCCTCTCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCATGGGTTTCCTGTCTATaGTCTCAAAAATGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSWVSCL*SQKCWW
Trigger: CCACCAGCATTTTTGAGACAATAGACAGGAAACCCA...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CCA 90 bp ATAAAAACATCTGTCATTGTGCCAAAAATGAGTAGCACGCCTGGCTaGGCTATTCCATGGAGAAATGCACACAAACTTCCCACAAACATC +
Preference number: 5 (lower is better)
Translates to: IKTSVIVPKMSSTPG*AIPWRNAHKLPTNI
Trigger: GATGTTTGTGGGAAGTTTGTGTGCATTTCTCCATGGAATAGCCCAGCCAGGCGTGCTACTCATTTTTGGCACAATGACAGATGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CCA 90 bp CTCTCGATGTTCAGCAACCCACAACGTGTTCCATTTGTCATGTTCTaGTTGAGGGAACTGTTAGTCCATACAATGGTGTTATTCACACAT +
Preference number: 5 (lower is better)
Translates to: LSMFSNPQRVPFVMF*LRELLVHTMVLFTH
Trigger: ATGTGTGAATAACACCATTGTATGGACTAACAGTTCCCTCAACCAGAACATGACAAATGGAACACGTTGTGGGTTGCTGAACATCGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCTTACTCAGCACTTCTaGCACCATGGCTTCACTCTC +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLTQHF*HHGFTL
Trigger: GAGAGTGAAGCCATGGTGCAAGAAGTGCTGAGTAAG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAGCATGTCATCTTCAGTaGCATCCTTTATGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSACHLQ*HPLCPL
Trigger: AAGAGGACATAAAGGATGCAACTGAAGATGACATGC...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGTGCACAGGAATGTCCTaGTCCTTTCTATCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLCTGMS*SFLSSS
Trigger: TGAAGAAGATAGAAAGGACAAGGACATTCCTGTGCA...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCAAAGGCATATCCCTGTAGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTATTTACGTAGCCTTTTaGTTAGGAGCTCCCCAGATT +
Preference number: 5 (lower is better)
Translates to: AKAYPCRNWVKRDTQPIAIYVAF*LGAPQI
Trigger: AATCTGGGGAGCTCCTAACAAAAAGGCTACGTAAAT...AGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGGGATATGCCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAAACCAGGCAATATCTaGCCCCAGCATTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHKPGNI*PQHCPE
Trigger: TTCAGGGCAATGCTGGGGCAAGATATTGCCTGGTTT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCTCTTCCAAGAGCTGTaGCACTCAGTACAACTGCAG +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLFQEL*HSVQLQ
Trigger: CTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCATTTTCACCTGCAGTATaGTATACACTGATTGGGGGT +
Preference number: 5 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSFSPAV*YTLIGG
Trigger: ACCCCCAATCAGTGTATACAATACTGCAGGTGAAAA...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCGTGTTGTCTCCATACTaGATATTGTCCATTATGCTA +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFVLSPY*ILSIML
Trigger: TAGCATAATGGACAATATCAAGTATGGAGACAACAC...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GAAGTTGTCCCATTTTTCACCTGCAGTATTGTATACACTGATTGGGGGTTGTCGTCCATGGGAATTTCTTaGGTGTTGTCTCCATACTTG +
Preference number: 5 (lower is better)
Translates to: EVVPFFTCSIVYTDWGLSSMGIS*VLSPYL
Trigger: CAAGTATGGAGACAACACCAAAGAAATTCCCATGGA...CGACAACCCCCAATCAGTGTATACAATACTGCAGGTGAAAAATGGGACAACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCTCTGAGATTCTTGCATaGGGTCAACTGATGGGGGAT +
Preference number: 5 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAASEILA*GQLMGD
Trigger: ATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGA...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GCTGAGCTGCCACTTGACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCCCATTAGAAATTAGCTaGGATTCCGATGTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: AELPLDIGFSLIWTLVSFPLEIS*DSDVGK
Trigger: TTTTCCTACATCGGAATCCAAGCTAATTTCTAATGG...GAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCAAAACAATTCCAATGTTaGAGCGGAGGAACTGGACAT +
Preference number: 5 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSKQFQC*SGGTGH
Trigger: ATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTTT...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CATTTGCTTTCTGGCTCCCAAGATTTTGCAGGTGGCATCACTGTGTTTTCTTCATTTCCATACAGGCTTTaGGTCCATTCTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: HLLSGSQDFAGGITVFSSFPYRL*VHSSVF
Trigger: GAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAA...TGAAGAAAACACAGTGATGCCACCTGCAAAATCTTGGGAGCCAGAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAGTAGGCACACACCATaGATCTGTGACCTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSRHTP*ICDLCS
Trigger: GGAACAAAGGTCACAGATCAATGGTGTGTGCCTACT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTTCCCCTGGAAGTaGTCCCATTTTTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHIFPWK*SHFSPA
Trigger: TGCAGGTGAAAAATGGGACAACTTCCAGGGGAAGAT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp ATAACTTGGGGTGTAAGAGAAGGCTCTTCCAAGAGCTGTTGCACTCAGTACAACGTGTTGTCTCCATACTaGATATTGTCCATTATGCTA +
Preference number: 5 (lower is better)
Translates to: ITWGVREGSSKSCCTQYNVLSPY*ILSIML
Trigger: TAGCATAATGGACAATATCAAGTATGGAGACAACAC...GTTGTACTGAGTGCAACAGCTCTTGGAAGAGCCTTCTCTTACACCCCAAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGTAGTAGGCTCCTTTTaGGGCCATCAGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHVVGSF*GHQFFM
Trigger: CATGAAGAACTGATGGCCCAAAAAGGAGCCTACTAC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTCTGAGATTCTTGCATaGGGTCAACTGATGGGGGAT +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSEILA*GQLMGD
Trigger: ATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACAGCTGCCACTTGACATaGGGTTTTCCCTCATATGGA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSCHLT*GFPSYG
Trigger: TCCATATGAGGGAAAACCCAATGTCAAGTGGCAGCT...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CAATTCTGTTTCCATACAGGCTTTTGGTCCATTCTTCTGTCTTCAGTCCCTCTGTCAGCCAAATGTCAGTaGATGAAGAAAACCGAAACA +
Preference number: 5 (lower is better)
Translates to: QFCFHTGFWSILLSSVPLSAKCQ*MKKTET
Trigger: TGTTTCGGTTTTCTTCATCAACTGACATTTGGCTGA...CAGAGGGACTGAAGACAGAAGAATGGACCAAAAGCCTGTATGGAAACAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CCA 90 bp TACTTGATATTGTCCATTATGCTACAGGCAAACAACACTGGTTCCTaGGAAACAATTCCAATGTTTGAGCGGAGGAACTGGACATTTACT +
Preference number: 5 (lower is better)
Translates to: YLILSIMLQANNTGS*ETIPMFERRNWTFT
Trigger: AGTAAATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTTTCCCAGGAACCAGTGTTGTTTGCCTGTAGCATAATGGACAATATCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp AGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTACAAAAAGTAGGCACACAGCATGTCATCTTCAGTaGCATCCTTTATGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RNWVKRDTQPIATKSRHTACHLQ*HPLCPL
Trigger: AAGAGGACATAAAGGATGCAACTGAAGATGACATGC...TGTGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGAGATACACAGCCCATaGCTACAAAAAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHEIHSP*LQKVGT
Trigger: TGTGCCTACTTTTTGTAGCAATGGGCTGTGTATCTC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp TTTTCTAATCACTGCATTGGCTCTGTTACTTCTAATTTCCTTTCTCCAGCTGCCATTTACGTAGCCTTTTaGTTAGGAGCTCCCCAGATT +
Preference number: 5 (lower is better)
Translates to: FSNHCIGSVTSNFLSPAAIYVAF*LGAPQI
Trigger: AATCTGGGGAGCTCCTAACAAAAAGGCTACGTAAAT...GGCAGCTGGAGAAAGGAAATTAGAAGTAACAGAGCCAATGCAGTGATTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATCTCTTCCAAGAGCTGTaGCACTCAGTACAACTGCAG +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNLFQEL*HSVQLQ
Trigger: CTGCAGTTGTACTGAGTGCAACAGCTCTTGGAAGAG...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTACACTGATTGGGGGTaGTCGGTCCAGCAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNYTDWG*SVQQLK
Trigger: TTTCAACTGCTGGACCGACAACCCCCAATCAGTGTA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GCAAAGGCATATCCCTGTAGAAATTGGGTGAAAAGAGATACACAGCCCATTGCTCCATTAGAAATTAGCTaGGATTCCGATGTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: AKAYPCRNWVKRDTQPIAPLEIS*DSDVGK
Trigger: TTTTCCTACATCGGAATCCAAGCTAATTTCTAATGG...AGCAATGGGCTGTGTATCTCTTTTCACCCAATTTCTACAGGGATATGCCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439188.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGATGGCCACCTTCCCTaGATCAGGATCATAGAAACG +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNDGHLP*IRIIET
Trigger: CGTTTCTATGATCCTGATCAAGGGAAGGTGGCCATC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649448.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCTCTTCATTAAGAGCTaGATTTCCCTGGCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLFIKS*ISLALQ
Trigger: TTGCAAAGCCAGGGAAATCAAGCTCTTAATGAAGAG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATAGTAGGCACACACCATaGATCTGTGACCTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSRHTP*ICDLCS
Trigger: GGAACAAAGGTCACAGATCAATGGTGTGTGCCTACT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTCTGAGATTCTTGCATaGGGTCAACTGATGGGGGAT +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSEILA*GQLMGD
Trigger: ATCCCCCATCAGTTGACCCAATGCAAGAATCTCAGA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCTCAAGAAACGTTTGTaGATTGCCTGTTATAGACCC +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHLKKRL*IACYRP
Trigger: GGGTCTATAACAGGCAATCAACAAACGTTTCTTGAG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACTCTCCATACTTGATATaGTCCATTATGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHSPYLI*SIMLQA
Trigger: TGCCTGTAGCATAATGGACAATATCAAGTATGGAGA...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGAATCGCTGAATGAGTaGCAGTGCTGTACTTTTTCC +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNESLNE*QCCTFS
Trigger: GGAAAAAGTACAGCACTGCAACTCATTCAGCGATTC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACCCAGCTGCCCTATTGTaGCTTTTGCTTTATATGTTA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHPAALL*LLLYML
Trigger: TAACATATAAAGCAAAAGCAACAATAGGGCAGCTGG...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGCAACTTACTCGTCATaGCCATTTTTCATAACCAGA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHATYSS*PFFITR
Trigger: TCTGGTTATGAAAAATGGCAATGACGAGTAAGTTGC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS TCA 90 bp GAATTCAATTTCACCCTTGATTCGATCCAACTTGTAACCATCTTCTaGCATGCAGTCAATGATGGGTTTCCTGTCTATTGTCTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: EFNFTLDSIQLVTIF*HAVNDGFPVYCLKN
Trigger: ATTTTTGAGACAATAGACAGGAAACCCATCATTGACTGCATGTCAGAAGATGGTTACAAGTTGGATCGAATCAAGGGTGAAATTGAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS GCA 90 bp GGCAATGACCCAAAAGCATATTTGAATATATCCTGTGATAAGTACTaGGACAGCAATTCCAGCATAGTAACTGGCAAATTTGATCATTTC +
Preference number: 5 (lower is better)
Translates to: GNDPKAYLNISCDKY*DSNSSIVTGKFDHF
Trigger: GAAATGATCAAATTTGCCAGTTACTATGCTGGAATTGCTGTCGCAGTACTTATCACAGGATATATTCAAATATGCTTTTGGGTCATTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATATTTACGTAGCCTTTTaGTTAGGAGCTCCCCAGATT +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNIYVAF*LGAPQI
Trigger: AATCTGGGGAGCTCCTAACAAAAAGGCTACGTAAAT...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTTTTCACCTGCAGTATaGTATACACTGATTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNFSPAV*YTLIGG
Trigger: ACCCCCAATCAGTGTATACAATACTGCAGGTGAAAA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp GACATTGGGTTTTCCCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACGTGTTGTCTCCATACTaGATATTGTCCATTATGCTA +
Preference number: 5 (lower is better)
Translates to: DIGFSLIWTLVSFIFCIHVLSPY*ILSIML
Trigger: TAGCATAATGGACAATATCAAGTATGGAGACAACAC...GTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGGGAAAACCCAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTCCATGGGAATTTCTTaGGTGTTGTCTCCATACTTG +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNSMGIS*VLSPYL
Trigger: CAAGTATGGAGACAACACCAAAGAAATTCCCATGGA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTATCATCACCTTCCCTaGATCAGGATCATAGAAACG +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNYHHLP*IRIIET
Trigger: CGTTTCTATGATCCTGATCAAGGGAAGGTGATGATA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618180.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATCTCAAGAAACGTTTGTaGATTGCCTGTTATAGACCC +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNLKKRL*IACYRP
Trigger: GGGTCTATAACAGGCAATCAACAAACGTTTCTTGAG...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS TCA 90 bp GATTTTATTAATATCATCAGAGAATCTTGTATTCAGCTCCCCCACTaGATTGCAGTCAAACCACCCTATTTCCATTCTCATTATTCTCCT +
Preference number: 5 (lower is better)
Translates to: DFINIIRESCIQLPH*IAVKPPYFHSHYSP
Trigger: AGGAGAATAATGAGAATGGAAATAGGGTGGTTTGACTGCAATTCAGTGGGGGAGCTGAATACAAGATTCTCTGATGATATTAATAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATTTATCAATTGTCCATTaGCTTTCTGGCTCCCAAGAT +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNLSIVH*LSGSQD
Trigger: ATCTTGGGAGCCAGAAAGCAAATGGACAATTGATAA...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATGTGTTGTCTCCATACTaGATATTGTCCATTATGCTA +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNVLSPY*ILSIML
Trigger: TAGCATAATGGACAATATCAAGTATGGAGACAACAC...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS-3UTR CAA 90 bp CCTCATATGGACCCTAGTTTCTTTCATTTTCTGTATACACATCTAAAGCAGAATCCATTAGAAATTAGCTaGGATTCCGATGTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PHMDPSFFHFLYTHLKQNPLEIS*DSDVGK
Trigger: TTTTCCTACATCGGAATCCAAGCTAATTTCTAATGG...ATTCTGCTTTAGATGTGTATACAGAAAATGAAAGAAACTAGGGTCCATATGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS TCA 72 bp GAGGTCAGAAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTGAACACATAGCTGAAATGGAG +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSEHIAEME
Trigger: CTCCATTTCAGCTATGTGTTCAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTTCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647920.1
CDS TCA 72 bp CCCAACAGGAAACCACAGATGGTCGAGGTCATGCGCTaGATGAAAAGGGCCATTTGGTCAGCTATGGCATCA +
Preference number: 6 (lower is better)
Translates to: PNRKPQMVEVMR*MKRAIWSAMAS
Trigger: TGATGCCATAGCTGACCAAATGGCCCTTTTCATTCAGCGCATGACCTCGACCATCTGTGGTTTCCTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS GCA 72 bp TGTCTCAAAAATGCTGGTGGCTGCTGCACGTCCAGTTaGAAAGGCTTCCAAACAAGGAGAGGCATTGCCAAG +
Preference number: 6 (lower is better)
Translates to: CLKNAGGCCTSS*KGFQTRRGIAK
Trigger: CTTGGCAATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS GCA 72 bp GGGTTTCCTGTCTATTGTCTCAAAAATGCTGGTGGCTaGTGCACGTCCAGTTGCAAAGGCTTCCAAACAAGG +
Preference number: 6 (lower is better)
Translates to: GFPVYCLKNAGG*CTSSCKGFQTR
Trigger: CCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGACAATAGACAGGAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 72 bp TTGTCTCAAAAATGCTGGTGGCTGCTGCACGTCCAGTaGCAAAGGCTTCCAAACAAGGAGAGGCATTGCCAA +
Preference number: 6 (lower is better)
Translates to: LSQKCWWLLHVQ*QRLPNKERHCQ
Trigger: TTGGCAATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 72 bp CATTCCTTCACAGGGGTCATAGAATCGCTGAATGAGTaGCAGTGCTGTACTTTTTCCAGCTCCACTGGGTCC +
Preference number: 6 (lower is better)
Translates to: HSFTGVIESLNE*QCCTFSSSTGS
Trigger: GGACCCAGTGGAGCTGGAAAAAGTACAGCACTGCAACTCATTCAGCGATTCTATGACCCCTGTGAAGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS TCA 72 bp TCACCATTCCTTCACAGGGGTCATAGAATCGCTGAATaGGTTGCAGTGCTGTACTTTTTCCAGCTCCACTGG +
Preference number: 6 (lower is better)
Translates to: SPFLHRGHRIAE*VAVLYFFQLHW
Trigger: CCAGTGGAGCTGGAAAAAGTACAGCACTGCAACTCATTCAGCGATTCTATGACCCCTGTGAAGGAATGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS TCA 72 bp TGCTCTGCCATCTGTGGTGTGTGGCTTTTGTCCAAGTaGTCACAGCATGGCTGCTTTTCACTTTCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: CSAICGVWLLSK*SQHGCFSLSVS
Trigger: AGACACAGAAAGTGAAAAGCAGCCATGCTGTGATCACTTGGACAAAAGCCACACACCACAGATGGCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648875.1
CDS GCA 72 bp GTCCGTAAACTTGGACACACTCAGACCAATGGTGGCTaGTCCAATCCCAATGAGAGGGCTGACAGAAATAAT +
Preference number: 6 (lower is better)
Translates to: VRKLGHTQTNGG*SNPNERADRNN
Trigger: ATTATTTCTGTCAGCCCTCTCATTGGGATTGGAGCAGCCACCATTGGTCTGAGTGTGTCCAAGTTTACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS GCA 72 bp GGATGTTCAGGAATCAGGCTGAATATCTTCCTGCTCTaGCATCTGTGGTGTGTGGCTTTTGTCCAAGTGATC +
Preference number: 6 (lower is better)
Translates to: GCSGIRLNIFLL*HLWCVAFVQVI
Trigger: GATCACTTGGACAAAAGCCACACACCACAGATGGCAGAGCAGGAAGATATTCAGCCTGATTCCTGAACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648875.1
CDS CCA 72 bp TCTGTCATTGTGCCAAAAATGAGTAGCACGCCTGGCTaGGCTATTCCATGGAGAAATGCACACAAACTTCCC +
Preference number: 6 (lower is better)
Translates to: SVIVPKMSSTPG*AIPWRNAHKLP
Trigger: GGGAAGTTTGTGTGCATTTCTCCATGGAATAGCCCAGCCAGGCGTGCTACTCATTTTTGGCACAATGACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 90 bp GCTGCTGCACGTCCAGTTGCAAAGGCTTCCAAACAAGGAGAGGCATaGCCAAGATTTAAAGCTCCTACTATGACACTGAGGAAAATCTGG +
Preference number: 6 (lower is better)
Translates to: AAARPVAKASKQGEA*PRFKAPTMTLRKIW
Trigger: CCAGATTTTCCTCAGTGTCATAGTAGGAGCTTTAAATCTTGGCAATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 90 bp TCCTGTCTATTGTCTCAAAAATGCTGGTGGCTGCTGCACGTCCAGTaGCAAAGGCTTCCAAACAAGGAGAGGCATTGCCAAGATTTAAAG +
Preference number: 6 (lower is better)
Translates to: SCLLSQKCWWLLHVQ*QRLPNKERHCQDLK
Trigger: CTTTAAATCTTGGCAATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACGTGCAGCAGCCACCAGCATTTTTGAGACAATAGACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 72 bp CGTCCAGTTGCAAAGGCTTCCAAACAAGGAGAGGCATaGCCAAGATTTAAAGCTCCTACTATGACACTGAGG +
Preference number: 6 (lower is better)
Translates to: RPVAKASKQGEA*PRFKAPTMTLR
Trigger: CCTCAGTGTCATAGTAGGAGCTTTAAATCTTGGCAATGCCTCTCCTTGTTTGGAAGCCTTTGCAACTGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS TCA 72 bp CTGCGACAGCAATTCCAGCATAGTAACTGGCAAATTTaGTCATTTCGCTCTCGATGTTCAGCAACCCACAAC +
Preference number: 6 (lower is better)
Translates to: LRQQFQHSNWQI*SFRSRCSATHN
Trigger: GTTGTGGGTTGCTGAACATCGAGAGCGAAATGATCAAATTTGCCAGTTACTATGCTGGAATTGCTGTCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CCA 72 bp TTGTCCATTATGCTACAGGCAAACAACACTGGTTCCTaGGAAACAATTCCAATGTTTGAGCGGAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: LSIMLQANNTGS*ETIPMFERRNW
Trigger: CCAGTTCCTCCGCTCAAACATTGGAATTGTTTCCCAGGAACCAGTGTTGTTTGCCTGTAGCATAATGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS CAA 72 bp ACCAGAGCTGTCATTTCCCCTGGTTTAATGACCATGTaGAGGTCATTTAGAATCTTCACCTCTGGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: TRAVISPGLMTM*RSFRIFTSGLE
Trigger: TTCCAGACCAGAGGTGAAGATTCTAAATGACCTCAACATGGTCATTAAACCAGGGGAAATGACAGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 90 bp TCGATGTTCAGCAACCCACAACGTGTTCCATTTGTCATGTTCTGGTaGAGGGAACTGTTAGTCCATACAATGGTGTTATTCACACATGCT +
Preference number: 6 (lower is better)
Translates to: SMFSNPQRVPFVMFW*RELLVHTMVLFTHA
Trigger: AGCATGTGTGAATAACACCATTGTATGGACTAACAGTTCCCTCAACCAGAACATGACAAATGGAACACGTTGTGGGTTGCTGAACATCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 72 bp AGCAACCCACAACGTGTTCCATTTGTCATGTTCTGGTaGAGGGAACTGTTAGTCCATACAATGGTGTTATTC +
Preference number: 6 (lower is better)
Translates to: SNPQRVPFVMFW*RELLVHTMVLF
Trigger: GAATAACACCATTGTATGGACTAACAGTTCCCTCAACCAGAACATGACAAATGGAACACGTTGTGGGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS TCA 72 bp CTCCTCTCCAAATTTCTTTATACTTCGAAGAATTACTaGGTCAGACATGGTAATTGCAACCCACAGCCAACG +
Preference number: 6 (lower is better)
Translates to: LLSKFLYTSKNY*VRHGNCNPQPT
Trigger: CGTTGGCTGTGGGTTGCAATTACCATGTCTGACTCAGTAATTCTTCGAAGTATAAAGAAATTTGGAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS TCA 72 bp TTCACCCTTGATTCGATCCAACTTGTAACCATCTTCTaGCATGCAGTCAATGATGGGTTTCCTGTCTATTGT +
Preference number: 6 (lower is better)
Translates to: FTLDSIQLVTIF*HAVNDGFPVYC
Trigger: ACAATAGACAGGAAACCCATCATTGACTGCATGTCAGAAGATGGTTACAAGTTGGATCGAATCAAGGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS GCA 72 bp CATCAGAGAATCTTGTATTCAGCTCCCCCACTGAATTaGAGTCAAACCACCCTATTTCCATTCTCATTATTC +
Preference number: 6 (lower is better)
Translates to: HQRILYSAPPLN*SQTTLFPFSLF
Trigger: GAATAATGAGAATGGAAATAGGGTGGTTTGACTGCAATTCAGTGGGGGAGCTGAATACAAGATTCTCTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 90 bp ACTCTTTCCATGGGAATTTCTTTGGTGTTGTCTCCATACTTGATATaGTCCATTATGCTACAGGCAAACAACACTGGTTCCTGGGAAACA +
Preference number: 6 (lower is better)
Translates to: TLSMGISLVLSPYLI*SIMLQANNTGSWET
Trigger: TGTTTCCCAGGAACCAGTGTTGTTTGCCTGTAGCATAATGGACAATATCAAGTATGGAGACAACACCAAAGAAATTCCCATGGAAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000618180.1
ENST00000649448.1
ENST00000650372.1
CDS TCA 72 bp AATATCATCAGAGAATCTTGTATTCAGCTCCCCCACTaGATTGCAGTCAAACCACCCTATTTCCATTCTCAT +
Preference number: 6 (lower is better)
Translates to: NIIRESCIQLPH*IAVKPPYFHSH
Trigger: ATGAGAATGGAAATAGGGTGGTTTGACTGCAATTCAGTGGGGGAGCTGAATACAAGATTCTCTGATGATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 72 bp TCATCAGAGAATCTTGTATTCAGCTCCCCCACTGAATaGCAGTCAAACCACCCTATTTCCATTCTCATTATT +
Preference number: 6 (lower is better)
Translates to: SSENLVFSSPTE*QSNHPISILII
Trigger: AATAATGAGAATGGAAATAGGGTGGTTTGACTGCAATTCAGTGGGGGAGCTGAATACAAGATTCTCTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1
CDS CAA 90 bp TTATTAATATCATCAGAGAATCTTGTATTCAGCTCCCCCACTGAATaGCAGTCAAACCACCCTATTTCCATTCTCATTATTCTCCTAAAG +
Preference number: 6 (lower is better)
Translates to: LLISSENLVFSSPTE*QSNHPISILIILLK
Trigger: CTTTAGGAGAATAATGAGAATGGAAATAGGGTGGTTTGACTGCAATTCAGTGGGGGAGCTGAATACAAGATTCTCTGATGATATTAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650372.1