RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000085563

Ensembl transcript IDs: ENST00000265724.8, ENST00000416177.1, ENST00000475929.5, ENST00000476862.1, ENST00000488737.6, ENST00000496821.5, ENST00000543898.5, ENST00000622132.5

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTGTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTaGGGAAATGTTAAACAGATACCTCTTCATAATTCTGTAAGTGTT +
Preference number: 1 (lower is better)
Translates to: LCSFNYEVSEDSELD*GNVKQIPLHNSVSV
Trigger: AACACTTACAGAATTATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAACAGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
3UTR-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGACTCTGAACTTGACTaGGGAAATGTTAAACAGATA +
Preference number: 2 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKDSELD*GNVKQI
Trigger: TATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
3UTR-3UTR TCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTGACTCTGAACTTGACTaGGGAAATGTTAAACAGATA +
Preference number: 2 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFDSELD*GNVKQI
Trigger: TATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTC...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
3UTR-3UTR CAA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAATCTGTGTTTTGGGTTaGAGAGCCACCTTAATGTGG +
Preference number: 3 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSICVLG*RATLMW
Trigger: CCACATTAAGGTGGCTCTCAAACCCAAAACACAGAT...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622132.5
3UTR-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACTGAAGACTCTGAACTaGACTGAGGAAATGTTAAAC +
Preference number: 3 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKLKTLN*TEEMLN
Trigger: GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
3UTR-3UTR CAA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTCTGAAGACTCTGAACTaGACTGAGGAAATGTTAAAC +
Preference number: 3 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFLKTLN*TEEMLN
Trigger: GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAG...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
3UTR TCA 72 bp TTCACAGGCAGTTTGGACAAGATGACTCCAGTCACATaGAAGTTTAGTTTTATTATAGACACTTTATGCAAA +
Preference number: 3 (lower is better)
Translates to: FTGSLDKMTPVT*KFSFIIDTLCK
Trigger: TTTGCATAAAGTGTCTATAATAAAACTAAACTTTCATGTGACTGGAGTCATCTTGTCCAAACTGCCTGTGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAAGAGCGAAGCGGCTGTaGTCAGCCCACGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRRAKRL*SAHAPA
Trigger: CGCCGGGGCGTGGGCTGAGCACAGCCGCTTCGCTCT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR GCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAGCTCCTGGGACACGATaGCCAGGTGTGCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSAPGTR*PGVLGA
Trigger: GGCTCCGAGCACACCTGGGCATCGTGTCCCAGGAGC...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACCCCGGCGCTGTTCCTaGCCAGCCAATCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKPRRCS*PANQPH
Trigger: GTGAGGCTGATTGGCTGGGCAGGAACAGCGCCGGGG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGCTCCTGGGACACGATaGCCAGGTGTGCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIAPGTR*PGVLGA
Trigger: GGCTCCGAGCACACCTGGGCATCGTGTCCCAGGAGC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCAGTCCCTGAAGCACTaGGATGTCCGGTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSQSLKH*DVRSGG
Trigger: CCCACCCGACCGGACATCCCAGTGCTTCAGGGACTG...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACAGCCTCACCACAGATaGCTGCTCCCGGCCCGGATT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLQPHHR*LLPARI
Trigger: AATCCGGGCCGGGAGCAGTCATCTGTGGTGAGGCTG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCAGCCTCACCACAGATaGCTGCTCCCGGCCCGGATT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNQPHHR*LLPARI
Trigger: AATCCGGGCCGGGAGCAGTCATCTGTGGTGAGGCTG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGCTCCTGGGACACGATaGCCAGGTGTGCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRAPGTR*PGVLGA
Trigger: GGCTCCGAGCACACCTGGGCATCGTGTCCCAGGAGC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCGACCTCGCGCTCCTTaGAACGGCCACCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNRPRAP*NGHQDV
Trigger: CACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACGACCTCGCGCTCCTTaGAACGGCCACCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLRPRAP*NGHQDV
Trigger: CACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCAGTCCCTGAAGCACTaGGATGTCCGGTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNQSLKH*DVRSGG
Trigger: CCCACCCGACCGGACATCCCAGTGCTTCAGGGACTG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGCTCCCGGCCCGGATTaGCTGAATGCTGATTCCTCG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLAPGPD*LNADSS
Trigger: CGAGGAATCAGCATTCAGTCAATCCGGGCCGGGAGC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGCTCCCGGCCCGGATTaGCTGAATGCTGATTCCTCG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNAPGPD*LNADSS
Trigger: CGAGGAATCAGCATTCAGTCAATCCGGGCCGGGAGC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGAGCCGCTACTCGAATaGGCTCAGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNEPLLE*AQASCG
Trigger: GCCACAGGAAGCCTGAGCTCATTCGAGTAGCGGCTC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGAGCCGCTACTCGAATaGGCTCAGGCTTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIEPLLE*AQASCG
Trigger: GCCACAGGAAGCCTGAGCTCATTCGAGTAGCGGCTC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCTGCCCAGACAGCAGCTaGCAGTCCAAGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVCPDSS*QSKNRT
Trigger: AGTCCTGTTCTTGGACTGTCAGCTGCTGTCTGGGCA...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAATCGGAGCCGCTTGGTaGGGATCTCTCCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSIGAAW*GSLQLC
Trigger: GCAAAGCTGGAGAGATCCTCACCAAGCGGCTCCGAT...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATCCAGGCTCAGTCCCTaGAGCACTGGGATGTCCGGT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLSRLSP*STGMSG
Trigger: ACCGGACATCCCAGTGCTTCAGGGACTGAGCCTGGA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACGACCTCGCGCTCCTTaGAACGGCCACCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRRPRAP*NGHQDV
Trigger: CACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACAGTCCCTGAAGCACTaGGATGTCCGGTCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRQSLKH*DVRSGG
Trigger: CCCACCCGACCGGACATCCCAGTGCTTCAGGGACTG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCGGCCTCTGCTTCTTTaGGCTTGGAAGAGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNRPLLL*AWKSRY
Trigger: GTAGCGGCTCTTCCAAGCTCAAAGAAGCAGAGGCCG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACGGCCTCTGCTTCTTTaGGCTTGGAAGAGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLRPLLL*AWKSRY
Trigger: GTAGCGGCTCTTCCAAGCTCAAAGAAGCAGAGGCCG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGTCCAGCCCCATGGATaGTGGCAGCCAAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKVQPHG*WQPKFP
Trigger: TGGGAACTTTGGCTGCCATCATCCATGGGGCTGGAC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGTCCAGCCCCATGGATaGTGGCAGCCAAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIVQPHG*WQPKFP
Trigger: TGGGAACTTTGGCTGCCATCATCCATGGGGCTGGAC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACCTGTCCATCAACACTaGCCATCCCCTCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKPVHQH*PSPLWG
Trigger: ACCCCACAGAGGGGATGGTCAGTGTTGATGGACAGG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAATCGGAGCCGCTTGGTaGGGATCTCTCCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIIGAAW*GSLQLC
Trigger: GCAAAGCTGGAGAGATCCTCACCAAGCGGCTCCGAT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACAGGAGCAAATGAACTaGCTTGCCCCACGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIQEQMN*LAPRPW
Trigger: CCATGGCCGTGGGGCAAGTCAGTTCATTTGCTCCTG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCAGGAGCAAATGAACTaGCTTGCCCCACGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNQEQMN*LAPRPW
Trigger: CCATGGCCGTGGGGCAAGTCAGTTCATTTGCTCCTG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATCCAGGCTCAGTCCCTaGAGCACTGGGATGTCCGGT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRSRLSP*STGMSG
Trigger: ACCGGACATCCCAGTGCTTCAGGGACTGAGCCTGGA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCTGGCCACCAGAGAGCTaGGTTCCTTTGTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVWPPES*VPLSPT
Trigger: AGTAGGAGACAAAGGAACTCAGCTCTCTGGTGGCCA...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCTCACCACAGATGACTaGTCCCGGCCCGGATTGACT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNLTTDD*SRPGLT
Trigger: AGTCAATCCGGGCCGGGAGCAGTCATCTGTGGTGAG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGCTCAGGCTTCCTGTaGCAAAGAGAGCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSSGFL*QRERSG
Trigger: GCCGCTTCGCTCTCTTTGCCACAGGAAGCCTGAGCT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAAGCTCAGGCTTCCTGTaGCAAAGAGAGCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISSGFL*QRERSG
Trigger: GCCGCTTCGCTCTCTTTGCCACAGGAAGCCTGAGCT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAAACAGGATGGGCTCCTaGGACACGATGCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFINRMGS*DTMPRC
Trigger: ACACCTGGGCATCGTGTCCCAGGAGCCCATCCTGTT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAACAGGATGGGCTCCTaGGACACGATGCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNNRMGS*DTMPRC
Trigger: ACACCTGGGCATCGTGTCCCAGGAGCCCATCCTGTT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACCGGCCCGGATTGACTaGATGCTGATTCCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLPARID*MLIPRE
Trigger: TTCTCGAGGAATCAGCATTCAGTCAATCCGGGCCGG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACCGGCCCGGATTGACTaGATGCTGATTCCTCGAGAA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIPARID*MLIPRE
Trigger: TTCTCGAGGAATCAGCATTCAGTCAATCCGGGCCGG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACGGCCTCTGCTTCTTTaGGCTTGGAAGAGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRRPLLL*AWKSRY
Trigger: GTAGCGGCTCTTCCAAGCTCAAAGAAGCAGAGGCCG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGTCCAGCCCCATGGATaGTGGCAGCCAAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRVQPHG*WQPKFP
Trigger: TGGGAACTTTGGCTGCCATCATCCATGGGGCTGGAC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCAAACACCAGCATCATaGGAGGAAGTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSQTPAS*EEVQPH
Trigger: ATGGGGCTGGACTTCCTCTCATGATGCTGGTGTTTG...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATGCCCAGACAGCAGCTaGCAGTCCAAGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKCPDSS*QSKNRT
Trigger: AGTCCTGTTCTTGGACTGTCAGCTGCTGTCTGGGCA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATGCCCAGACAGCAGCTaGCAGTCCAAGAACAGGACT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLCPDSS*QSKNRT
Trigger: AGTCCTGTTCTTGGACTGTCAGCTGCTGTCTGGGCA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTCCTGTCCATCAACACTaGCCATCCCCTCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFPVHQH*PSPLWG
Trigger: ACCCCACAGAGGGGATGGTCAGTGTTGATGGACAGG...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATCTGTCTTGGGCTTGTaGTCCACGGACACTCCTACG +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSVLGL*STDTPT
Trigger: CGTAGGAGTGTCCGTGGATCACAAGCCCAAGACAGA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATCTGTCTTGGGCTTGTaGTCCACGGACACTCCTACG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLSVLGL*STDTPT
Trigger: CGTAGGAGTGTCCGTGGATCACAAGCCCAAGACAGA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATCGGAGCCGCTTGGTaGGGATCTCTCCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRIGAAW*GSLQLC
Trigger: GCAAAGCTGGAGAGATCCTCACCAAGCGGCTCCGAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACAGGAGCAAATGAACTaGCTTGCCCCACGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRQEQMN*LAPRPW
Trigger: CCATGGCCGTGGGGCAAGTCAGTTCATTTGCTCCTG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGCAAATGAACTGACTTaGCCCACGGCCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNANELT*PTAMAP
Trigger: TGGTGCCATGGCCGTGGGGCAAGTCAGTTCATTTGC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGCAAATGAACTGACTTaGCCCACGGCCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIANELT*PTAMAP
Trigger: TGGTGCCATGGCCGTGGGGCAAGTCAGTTCATTTGC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACACGATGCCCAGGTGTaGTCGGAGCCACTGAACATT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLHDAQV*SEPLNI
Trigger: AATGTTCAGTGGCTCCGAGCACACCTGGGCATCGTG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAGTTGGCCTCCTTTGCTaGCCTCACAATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSVGLLC*PHNLFL
Trigger: CAGGAAGAGATTGTGAGGGCAGCAAAGGAGGCCAAC...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCTGAGAGGACCAAGGTaGTCCCATACCAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNLRGPR*SHTRRP
Trigger: TGGCCTTCTGGTATGGGACCACCTTGGTCCTCTCAG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACTGAGAGGACCAAGGTaGTCCCATACCAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKLRGPR*SHTRRP
Trigger: TGGCCTTCTGGTATGGGACCACCTTGGTCCTCTCAG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACTGAGAGGACCAAGGTaGTCCCATACCAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLLRGPR*SHTRRP
Trigger: TGGCCTTCTGGTATGGGACCACCTTGGTCCTCTCAG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTAACAGGATGGGCTCCTaGGACACGATGCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFNRMGS*DTMPRC
Trigger: ACACCTGGGCATCGTGTCCCAGGAGCCCATCCTGTT...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAACAGTCAGAGTTCACTaGCGCTTTGTTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSTVRVH*RFVPAW
Trigger: CCAGGCTGGAACAAAGCGCCAGTGAACTCTGACTGT...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCAAACACCAGCATCATaGGAGGAAGTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNQTPAS*EEVQPH
Trigger: ATGGGGCTGGACTTCCTCTCATGATGCTGGTGTTTG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAATAGTCAGGAGCAAATaGACTGACTTGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLIVRSK*TDLPHG
Trigger: GCCGTGGGGCAAGTCAGTTCATTTGCTCCTGACTAT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACATAGTCAGGAGCAAATaGACTGACTTGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNIVRSK*TDLPHG
Trigger: GCCGTGGGGCAAGTCAGTTCATTTGCTCCTGACTAT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATGGCCACCAGAGAGCTaGGTTCCTTTGTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLWPPES*VPLSPT
Trigger: AGTAGGAGACAAAGGAACTCAGCTCTCTGGTGGCCA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTGGCCACCAGAGAGCTaGGTTCCTTTGTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNWPPES*VPLSPT
Trigger: AGTAGGAGACAAAGGAACTCAGCTCTCTGGTGGCCA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTACGAACAGCGGCCTCTaGTTCTTTGAGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSTNSGL*FFELGR
Trigger: TCTTCCAAGCTCAAAGAAGCAGAGGCCGCTGTTCGT...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGCAAATGAACTGACTTaGCCCACGGCCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRANELT*PTAMAP
Trigger: TGGTGCCATGGCCGTGGGGCAAGTCAGTTCATTTGC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACACGATGCCCAGGTGTaGTCGGAGCCACTGAACATT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRHDAQV*SEPLNI
Trigger: AATGTTCAGTGGCTCCGAGCACACCTGGGCATCGTG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTCACGATGCCCAGGTGTaGTCGGAGCCACTGAACATT +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFHDAQV*SEPLNI
Trigger: AATGTTCAGTGGCTCCGAGCACACCTGGGCATCGTG...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGTTGGCCTCCTTTGCTaGCCTCACAATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLVGLLC*PHNLFL
Trigger: CAGGAAGAGATTGTGAGGGCAGCAAAGGAGGCCAAC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACACGAGCTATGGCAATaGGTTGTTTCTGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLHELWQ*VVSGHQ
Trigger: CTGGTGGCCAGAAACAACGCATTGCCATAGCTCGTG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACACGAGCTATGGCAATaGGTTGTTTCTGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIHELWQ*VVSGHQ
Trigger: CTGGTGGCCAGAAACAACGCATTGCCATAGCTCGTG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCCAGGAGGAATGTTCTaGCTTCCGTTGCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNPGGMF*LPLHLS
Trigger: AGAGAGGTGCAACGGAAGCCAGAACATTCCTCCTGG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGGAAGTCCAGCCCCATaGATGATGGCAGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLGSPAP*MMAAKV
Trigger: AACTTTGGCTGCCATCATCCATGGGGCTGGACTTCC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCCTAAGCTTTCTGTCTTaGGCTTGTGATCCACGGACA +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVLSFLS*ACDPRT
Trigger: TGTCCGTGGATCACAAGCCCAAGACAGAAAGCTTAG...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAACAGTCAGAGTTCACTaGCGCTTTGTTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLTVRVH*RFVPAW
Trigger: CCAGGCTGGAACAAAGCGCCAGTGAACTCTGACTGT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAACAGTCAGAGTTCACTaGCGCTTTGTTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKTVRVH*RFVPAW
Trigger: CCAGGCTGGAACAAAGCGCCAGTGAACTCTGACTGT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACAAACACCAGCATCATaGGAGGAAGTCCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRQTPAS*EEVQPH
Trigger: ATGGGGCTGGACTTCCTCTCATGATGCTGGTGTTTG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCATGCCAGGCACCAAAATaGAACCTGAATGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSCQAPK*NLNVSS
Trigger: GCTGCTTACATTCAGGTTTCATTTTGGTGCCTGGCA...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGTCCAAGAACAGGACTaGTGGCCAAAATCACAAGGG +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKVQEQD*WPKSQG
Trigger: CCCTTGTGATTTTGGCCATCAGTCCTGTTCTTGGAC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGTCCAAGAACAGGACTaGTGGCCAAAATCACAAGGG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLVQEQD*WPKSQG
Trigger: CCCTTGTGATTTTGGCCATCAGTCCTGTTCTTGGAC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAAATAGAATATTCCCCTaGGAGGACCAAGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFINRIFP*EDQGGP
Trigger: GGGACCACCTTGGTCCTCTCAGGGGAATATTCTATT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAATAGAATATTCCCCTaGGAGGACCAAGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNNRIFP*EDQGGP
Trigger: GGGACCACCTTGGTCCTCTCAGGGGAATATTCTATT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCAGGCATTGGCTTCCTTaGCAGCTTTCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVRHWLP*QLSQSH
Trigger: ATGAGATTGAGAAAGCTGTCAAGGAAGCCAATGCCT...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACATCGAAACCAGCGATaGCGTCAGCATTACGAACTG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIHRNQR*RQHYEL
Trigger: CAGTTCGTAATGCTGACGTCATCGCTGGTTTCGATG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACATCGAAACCAGCGATaGCGTCAGCATTACGAACTG +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKHRNQR*RQHYEL
Trigger: CAGTTCGTAATGCTGACGTCATCGCTGGTTTCGATG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAATAGCCCCTTTAACTTaGGCAGCATCATTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIIAPLT*AASLAS
Trigger: GCTCGCCAATGATGCTGCTCAAGTTAAAGGGGCTAT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACATAGCCCCTTTAACTTaGGCAGCATCATTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNIAPLT*AASLAS
Trigger: GCTCGCCAATGATGCTGCTCAAGTTAAAGGGGCTAT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATAGTCAGGAGCAAATaGACTGACTTGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRIVRSK*TDLPHG
Trigger: GCCGTGGGGCAAGTCAGTTCATTTGCTCCTGACTAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACACGAACAGCGGCCTCTaGTTCTTTGAGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNTNSGL*FFELGR
Trigger: TCTTCCAAGCTCAAAGAAGCAGAGGCCGCTGTTCGT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATCTTTGCTCCTCCATTaGGGTCCCCTTCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISLLLH*GPLQDP
Trigger: TGGATCTTGAAGGGGACCGCAATGGAGGAGCAAAGA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATCTTTGCTCCTCCATTaGGGTCCCCTTCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSLLLH*GPLQDP
Trigger: TGGATCTTGAAGGGGACCGCAATGGAGGAGCAAAGA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAAGCTCCCCAACATCGTaGACATCAAACCAGCCTATC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISSPTS*TSNQPI
Trigger: GATAGGCTGGTTTGATGTGCACGATGTTGGGGAGCT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGACCTCTTCAGCTACTaGTCCAGCTTTTGCATACGC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNDLFSY*SSFCIR
Trigger: GCGTATGCAAAAGCTGGAGCAGTAGCTGAAGAGGTC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGACCTCTTCAGCTACTaGTCCAGCTTTTGCATACGC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIDLFSY*SSFCIR
Trigger: GCGTATGCAAAAGCTGGAGCAGTAGCTGAAGAGGTC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGACCTCTTCAGCTACTaGTCCAGCTTTTGCATACGC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLDLFSY*SSFCIR
Trigger: GCGTATGCAAAAGCTGGAGCAGTAGCTGAAGAGGTC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGCCACCTGAACCACTaGTTCGCTTTCTGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSHLNH*FAFCVQ
Trigger: TTGGACACAGAAAGCGAAGCAGTGGTTCAGGTGGCT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAAGCCACCTGAACCACTaGTTCGCTTTCTGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISHLNH*FAFCVQ
Trigger: TTGGACACAGAAAGCGAAGCAGTGGTTCAGGTGGCT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAGGGCTGCTGATATTTTaGCTTTGGCATAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSGLLIF*LWHSQE
Trigger: CTCCTGACTATGCCAAAGCCAAAATATCAGCAGCCC...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGGATTGACTGAATGCTaGTTCCTCGAGAAACTGCGA +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNGLTEC*FLEKLR
Trigger: TCGCAGTTTCTCGAGGAATCAGCATTCAGTCAATCC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGGATTGACTGAATGCTaGTTCCTCGAGAAACTGCGA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLGLTEC*FLEKLR
Trigger: TCGCAGTTTCTCGAGGAATCAGCATTCAGTCAATCC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTACGGCCACCAAGACGTaGAATTTTGGAAGAAGATAC +
Preference number: 4 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSTATKT*NFGRRY
Trigger: GTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGT...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGTCCAAGAACAGGACTaGTGGCCAAAATCACAAGGG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRVQEQD*WPKSQG
Trigger: CCCTTGTGATTTTGGCCATCAGTCCTGTTCTTGGAC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTAATAGAATATTCCCCTaGGAGGACCAAGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFNRIFP*EDQGGP
Trigger: GGGACCACCTTGGTCCTCTCAGGGGAATATTCTATT...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACATCGAAACCAGCGATaGCGTCAGCATTACGAACTG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRHRNQR*RQHYEL
Trigger: CAGTTCGTAATGCTGACGTCATCGCTGGTTTCGATG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCATTCCTTTCTCCACAATaGCTCCATCATCGAAACCAG +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSFLSPQ*LHHRNQ
Trigger: CTGGTTTCGATGATGGAGTCATTGTGGAGAAAGGAA...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTCACATCCTGTCTaGGCATGGATCGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLNSHPV*AWIGKP
Trigger: TGGTTTTCCGATCCATGCTCAGACAGGATGTGAGTT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATAGCCCCTTTAACTTaGGCAGCATCATTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRIAPLT*AASLAS
Trigger: GCTCGCCAATGATGCTGCTCAAGTTAAAGGGGCTAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCACATCCTCAAAGCTCATaGGTTTATGTGCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSHPQSS*VYVPPS
Trigger: ACTTGGTGGCACATAAACTCATGAGCTTTGAGGATG...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAGATGATGTGGGCTGCTaGTATTTTGGCTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSDDVGC*YFGFGI
Trigger: TATGCCAAAGCCAAAATATCAGCAGCCCACATCATC...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATGTGCTCGGAGCCACTaGACATTCAGTCGCTTTATT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLCARSH*TFSRFI
Trigger: AATAAAGCGACTGAATGTTCAGTGGCTCCGAGCACA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAAAGTTCTTCTTCTTTaGTCCTCCATTGCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLKVLLL*SSIAVP
Trigger: GGGGACCGCAATGGAGGAGCAAAGAAGAAGAACTTT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGAAAGTTCTTCTTCTTTaGTCCTCCATTGCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMKVLLL*SSIAVP
Trigger: GGGGACCGCAATGGAGGAGCAAAGAAGAAGAACTTT...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAAGCTCCCCAACATCGTaGACATCAAACCAGCCTATC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRSSPTS*TSNQPI
Trigger: GATAGGCTGGTTTGATGTGCACGATGTTGGGGAGCT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000622132.5
CDS-3UTR GCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCTTCAATGCTTGGAGATaGCTGTCCAACACTAAAAGC +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVFNAWR*LSNTKS
Trigger: GCTTTTAGTGTTGGACAGGCATCTCCAAGCATTGAA...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGAGCCTGGTAGTCAATaGTCCAGTGGTGTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIEPGSQ*SSGVFR
Trigger: CCTAAAAACACCACTGGAGCATTGACTACCAGGCTC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGAGCCTGGTAGTCAATaGTCCAGTGGTGTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNEPGSQ*SSGVFR
Trigger: CCTAAAAACACCACTGGAGCATTGACTACCAGGCTC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGCATTAGGCCTTCCGTaGTGTAGCTGTCAATCAAAG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIALGLP*CSCQSK
Trigger: CTTTGATTGACAGCTACAGCACGGAAGGCCTAATGC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGGCATTAGGCCTTCCGTaGTGTAGCTGTCAATCAAAG +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMALGLP*CSCQSK
Trigger: CTTTGATTGACAGCTACAGCACGGAAGGCCTAATGC...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATGTTCTCAGCAATGCTaGAGTCAAACAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKCSQQC*SQTGWA
Trigger: AGCCCATCCTGTTTGACTGCAGCATTGCTGAGAACA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTGTTCTCAGCAATGCTaGAGTCAAACAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNCSQQC*SQTGWA
Trigger: AGCCCATCCTGTTTGACTGCAGCATTGCTGAGAACA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATGTTCTCAGCAATGCTaGAGTCAAACAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLCSQQC*SQTGWA
Trigger: AGCCCATCCTGTTTGACTGCAGCATTGCTGAGAACA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACTAAGCTTTCTGTCTTaGGCTTGTGATCCACGGACA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFILSFLS*ACDPRT
Trigger: TGTCCGTGGATCACAAGCCCAAGACAGAAAGCTTAG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCTAAGCTTTCTGTCTTaGGCTTGTGATCCACGGACA +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNLSFLS*ACDPRT
Trigger: TGTCCGTGGATCACAAGCCCAAGACAGAAAGCTTAG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCCAAAGAGTTTCTGTATaGTACCTGCAAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVQRVSV*YLQTLS
Trigger: GCTCAGAGTTTGCAGGTACCATACAGAAACTCTTTG...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGGGCTGCTGATATTTTaGCTTTGGCATAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIGLLIF*LWHSQE
Trigger: CTCCTGACTATGCCAAAGCCAAAATATCAGCAGCCC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGGGCTGCTGATATTTTaGCTTTGGCATAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKGLLIF*LWHSQE
Trigger: CTCCTGACTATGCCAAAGCCAAAATATCAGCAGCCC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAACGGCCACCAAGACGTaGAATTTTGGAAGAAGATAC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLTATKT*NFGRRY
Trigger: GTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATGCCAGGCACCAAAATaGAACCTGAATGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRCQAPK*NLNVSS
Trigger: GCTGCTTACATTCAGGTTTCATTTTGGTGCCTGGCA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGACTCACCACACCAATaGTTTCCCGTAGAAACCTTA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLDSPHQ*FPVETL
Trigger: TAAGGTTTCTACGGGAAATCATTGGTGTGGTGAGTC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGACTCACCACACCAATaGTTTCCCGTAGAAACCTTA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIDSPHQ*FPVETL
Trigger: TAAGGTTTCTACGGGAAATCATTGGTGTGGTGAGTC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGGCATTGGCTTCCTTaGCAGCTTTCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNRHWLP*QLSQSH
Trigger: ATGAGATTGAGAAAGCTGTCAAGGAAGCCAATGCCT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAGGCATTGGCTTCCTTaGCAGCTTTCTCAATCTCAT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKRHWLP*QLSQSH
Trigger: ATGAGATTGAGAAAGCTGTCAAGGAAGCCAATGCCT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATTCCTTTCTCCACAATaGCTCCATCATCGAAACCAG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIFLSPQ*LHHRNQ
Trigger: CTGGTTTCGATGATGGAGTCATTGTGGAGAAAGGAA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTTCCTTTCTCCACAATaGCTCCATCATCGAAACCAG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNFLSPQ*LHHRNQ
Trigger: CTGGTTTCGATGATGGAGTCATTGTGGAGAAAGGAA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACATCCTCAAAGCTCATaGGTTTATGTGCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIHPQSS*VYVPPS
Trigger: ACTTGGTGGCACATAAACTCATGAGCTTTGAGGATG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACATCCTCAAAGCTCATaGGTTTATGTGCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKHPQSS*VYVPPS
Trigger: ACTTGGTGGCACATAAACTCATGAGCTTTGAGGATG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGATGATGTGGGCTGCTaGTATTTTGGCTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKDDVGC*YFGFGI
Trigger: TATGCCAAAGCCAAAATATCAGCAGCCCACATCATC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGATGATGTGGGCTGCTaGTATTTTGGCTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNDDVGC*YFGFGI
Trigger: TATGCCAAAGCCAAAATATCAGCAGCCCACATCATC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATGTGCTCGGAGCCACTaGACATTCAGTCGCTTTATT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRCARSH*TFSRFI
Trigger: AATAAAGCGACTGAATGTTCAGTGGCTCCGAGCACA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCATCCAAAAGCAAAATATaGGGCTGTCTAACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSSKSKI*GCLTRA
Trigger: TGCCCTTGTTAGACAGCCTCATATTTTGCTTTTGGA...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATGTTCTGGCTTCCGTTaGACCTCTCTTTTATCTGGT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLCSGFR*TSLLSG
Trigger: ACCAGATAAAAGAGAGGTGCAACGGAAGCCAGAACA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATGTTCTGGCTTCCGTTaGACCTCTCTTTTATCTGGT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKCSGFR*TSLLSG
Trigger: ACCAGATAAAAGAGAGGTGCAACGGAAGCCAGAACA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACACAGTTCTAATTGCTaGCAAGACCTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLHSSNC*QDLFSY
Trigger: GTAGCTGAAGAGGTCTTGGCAGCAATTAGAACTGTG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTTTGCAAATGCTTCAATaGTTGGAGATGCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSLQMLQ*LEMPVQ
Trigger: TTGGACAGGCATCTCCAAGCATTGAAGCATTTGCAA...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGAGCCTGGTAGTCAATaGTCCAGTGGTGTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNREPGSQ*SSGVFR
Trigger: CCTAAAAACACCACTGGAGCATTGACTACCAGGCTC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGCTCATGAGTTTATGTaGCACCAAGTAGGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKAHEFM*HQVGSK
Trigger: TTTGGAGCCTACTTGGTGGCACATAAACTCATGAGC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGCTCATGAGTTTATGTaGCACCAAGTAGGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIAHEFM*HQVGSK
Trigger: TTTGGAGCCTACTTGGTGGCACATAAACTCATGAGC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTAAATGCTTCAATGCTTaGAGATGCCTGTCCAACACT +
Preference number: 4 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSKCFNA*RCLSNT
Trigger: AGTGTTGGACAGGCATCTCCAAGCATTGAAGCATTT...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCTGTTTTCAGCTATCGTaGTGGCAAACAATACAGGTT +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVCFQLS*WQTIQV
Trigger: AACCTGTATTGTTTGCCACCACGATAGCTGAAAACA...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATCTTGGAGACATCACTaGTCATGTCTTCCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISWRHH*SCLPPD
Trigger: ATCTGGAGGAAGACATGACCAGTGATGTCTCCAAGA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543898.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAACTGCGAAACAGGTTaGATTTCCAGGAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKNCETG*ISRRNV
Trigger: AACATTCCTCCTGGAAATTCAACCTGTTTCGCAGTT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACAGCTTTGCCAAATGTaGAACCCTGAAGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKQLCQM*NPEGKM
Trigger: CATTTTTCCTTCAGGGTTTCACATTTGGCAAAGCTG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGCAGCTTTGCCAAATGTaGAACCCTGAAGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMQLCQM*NPEGKM
Trigger: CATTTTTCCTTCAGGGTTTCACATTTGGCAAAGCTG...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACTCCTGCTATTGCAATaGTGGGTACAATTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKLLLLQ*WVQLLR
Trigger: TCTTAGCAATTGTACCCATCATTGCAATAGCAGGAG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTCAAACTTCTGCTCCTaGGTCAAAGAAACAACGGTT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSNFCS*VKETTV
Trigger: AACCGTTGTTTCTTTGACTCAGGAGCAGAAGTTTGA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATCAAACTTCTGCTCCTaGGTCAAAGAAACAACGGTT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISNFCS*VKETTV
Trigger: AACCGTTGTTTCTTTGACTCAGGAGCAGAAGTTTGA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGTCAAACTTCTGCTCCTaGGTCAAAGAAACAACGGTT +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMSNFCS*VKETTV
Trigger: AACCGTTGTTTCTTTGACTCAGGAGCAGAAGTTTGA...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGGTACCTGCAAACTCTaGGCATACATATGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLGTCKL*AYICSN
Trigger: GTTTGAACATATGTATGCTCAGAGTTTGCAGGTACC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACGGTACCTGCAAACTCTaGGCATACATATGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNGTCKL*AYICSN
Trigger: GTTTGAACATATGTATGCTCAGAGTTTGCAGGTACC...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGGTACCTGCAAACTCTaGGCATACATATGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKGTCKL*AYICSN
Trigger: GTTTGAACATATGTATGCTCAGAGTTTGCAGGTACC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCATATTTATTAGGCAGTaGCTCGATGAAGGCATGTAT +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVIFIRQ*LDEGMY
Trigger: ATACATGCCTTCATCGAGTCACTGCCTAATAAATAT...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATCCAAAAGCAAAATATaGGGCTGTCTAACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISKSKI*GCLTRA
Trigger: TGCCCTTGTTAGACAGCCTCATATTTTGCTTTTGGA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGCAGTTTGGACAAGATaGCTCCAGTCACATGAAAGT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRAVWTR*LQSHES
Trigger: ACTTTCATGTGACTGGAGTCATCTTGTCCAAACTGC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACACAGTTCTAATTGCTaGCAAGACCTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRHSSNC*QDLFSY
Trigger: GTAGCTGAAGAGGTCTTGGCAGCAATTAGAACTGTG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTCACAGTTCTAATTGCTaGCAAGACCTCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFHSSNC*QDLFSY
Trigger: GTAGCTGAAGAGGTCTTGGCAGCAATTAGAACTGTG...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATTCAATGCTTGGAGATaGCTGTCCAACACTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIFNAWR*LSNTKS
Trigger: GCTTTTAGTGTTGGACAGGCATCTCCAAGCATTGAA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATTCAATGCTTGGAGATaGCTGTCCAACACTAAAAGC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLFNAWR*LSNTKS
Trigger: GCTTTTAGTGTTGGACAGGCATCTCCAAGCATTGAA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATTGCAAATGCTTCAATaGTTGGAGATGCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKLQMLQ*LEMPVQ
Trigger: TTGGACAGGCATCTCCAAGCATTGAAGCATTTGCAA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTGCTCCTCTTGCATTTaGAAATGCTTCAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNCSSCI*KCFNAW
Trigger: CCAAGCATTGAAGCATTTGCAAATGCAAGAGGAGCA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCAAATATTATTGCAAATaGTGGTTGCAGGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: FQLREDIFTGSLDKMTPVKYYCK*WLQASI
Trigger: AATGGAGGCCTGCAACCAGCATTTGCAATAATATTT...GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATCGGAAGTTTTCTATTaGTTCAGTAGCGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSEVFY*FSSDLP
Trigger: GGGAAGATCGCTACTGAAGCAATAGAAAACTTCCGA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTGCTCATGAGTTTATGTaGCACCAAGTAGGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFAHEFM*HQVGSK
Trigger: TTTGGAGCCTACTTGGTGGCACATAAACTCATGAGC...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGTCGCTTTATTTCTTTaGCATCAAGCAGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLVALFL*HQAALS
Trigger: GGAAAGTGCTGCTTGATGGCAAAGAAATAAAGCGAC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAGTCGCTTTATTTCTTTaGCATCAAGCAGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKVALFL*HQAALS
Trigger: GGAAAGTGCTGCTTGATGGCAAAGAAATAAAGCGAC...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGGTCGCTTTATTTCTTTaGCATCAAGCAGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMVALFL*HQAALS
Trigger: GGAAAGTGCTGCTTGATGGCAAAGAAATAAAGCGAC...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACACCTCTCTTTTATCTaGTTGCTTCCTGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKHLSFI*LLPEVS
Trigger: ACTCACTTCAGGAAGCAACCAGATAAAAGAGAGGTG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACACCTCTCTTTTATCTaGTTGCTTCCTGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLHLSFI*LLPEVS
Trigger: ACTCACTTCAGGAAGCAACCAGATAAAAGAGAGGTG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCATCCCTTAATATTATCTaGTTTGTGCCCACTCTTCGA +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSSLNII*FVPTLR
Trigger: TCGAAGAGTGGGCACAAACCAGATAATATTAAGGGA...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATTTCAGCTATCGTGGTaGCAAACAATACAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKFQLSW*QTIQVP
Trigger: AGGAACCTGTATTGTTTGCCACCACGATAGCTGAAA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTTTCAGCTATCGTGGTaGCAAACAATACAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNFQLSW*QTIQVP
Trigger: AGGAACCTGTATTGTTTGCCACCACGATAGCTGAAA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATTTCAGCTATCGTGGTaGCAAACAATACAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIFQLSW*QTIQVP
Trigger: AGGAACCTGTATTGTTTGCCACCACGATAGCTGAAA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACAAAGAGTTTCTGTATaGTACCTGCAAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKQRVSV*YLQTLS
Trigger: GCTCAGAGTTTGCAGGTACCATACAGAAACTCTTTG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAGAGCCACCTTAATGTaGAAATGCAAGAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLRATLM*KCKNQQ
Trigger: CTGCTGATTCTTGCATTTCCACATTAAGGTGGCTCT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCATTCATGAGTTCATCATaGTTTCCTTTCTCCACAATG +
Preference number: 4 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSFMSSS*FPFSTM
Trigger: CATTGTGGAGAAAGGAAATCATGATGAACTCATGAA...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACAGCTTTGCCAAATGTaGAACCCTGAAGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRQLCQM*NPEGKM
Trigger: CATTTTTCCTTCAGGGTTTCACATTTGGCAAAGCTG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTCTCCTGCTATTGCAATaGTGGGTACAATTGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFLLLLQ*WVQLLR
Trigger: TCTTAGCAATTGTACCCATCATTGCAATAGCAGGAG...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACAACTTCACCAAATGTaGCATTTCCTTCCAATGTGT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIQLHQM*HFLPMC
Trigger: ACACATTGGAAGGAAATGTCACATTTGGTGAAGTTG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACAACTTCACCAAATGTaGCATTTCCTTCCAATGTGT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLQLHQM*HFLPMC
Trigger: ACACATTGGAAGGAAATGTCACATTTGGTGAAGTTG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATTGCAAATGCTTCAATaGTTGGAGATGCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRLQMLQ*LEMPVQ
Trigger: TTGGACAGGCATCTCCAAGCATTGAAGCATTTGCAA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATCTTGCATTTGCAAATaGTTCAATGCTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISCICK*FNAWRC
Trigger: GCATCTCCAAGCATTGAAGCATTTGCAAATGCAAGA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATCTTGCATTTGCAAATaGTTCAATGCTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLSCICK*FNAWRC
Trigger: GCATCTCCAAGCATTGAAGCATTTGCAAATGCAAGA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGTCTTGCATTTGCAAATaGTTCAATGCTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMSCICK*FNAWRC
Trigger: GCATCTCCAAGCATTGAAGCATTTGCAAATGCAAGA...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATGCTCCTCTTGCATTTaGAAATGCTTCAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRCSSCI*KCFNAW
Trigger: CCAAGCATTGAAGCATTTGCAAATGCAAGAGGAGCA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTTGCTCCTCTTGCATTTaGAAATGCTTCAATGCTTGG +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFCSSCI*KCFNAW
Trigger: CCAAGCATTGAAGCATTTGCAAATGCAAGAGGAGCA...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATTCAACTTCATTTCCTaGTGTCTGCATTGTGACAAG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIFNFIS*CLHCDK
Trigger: CTTGTCACAATGCAGACAGCAGGAAATGAAGTTGAA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACATTGCAAATGCTGGTTaGAGGCCTCCATTTATAATG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNIANAG*RPPFIM
Trigger: CATTATAAATGGAGGCCTGCAACCAGCATTTGCAAT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGATTGCAAATGCTGGTTaGAGGCCTCCATTTATAATG +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMIANAG*RPPFIM
Trigger: CATTATAAATGGAGGCCTGCAACCAGCATTTGCAAT...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAACAACTCCTGCTATTaGAATGATGGGTACAATTGC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNNNSCY*NDGYNC
Trigger: GCAATTGTACCCATCATTGCAATAGCAGGAGTTGTT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCATTTCAACAACTCCTaGTATTGCAATGATGGGTAC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNHFNNS*YCNDGY
Trigger: GTACCCATCATTGCAATAGCAGGAGTTGTTGAAATG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACATTTCAACAACTCCTaGTATTGCAATGATGGGTAC +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLHFNNS*YCNDGY
Trigger: GTACCCATCATTGCAATAGCAGGAGTTGTTGAAATG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATCGGAAGTTTTCTATTaGTTCAGTAGCGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRSEVFY*FSSDLP
Trigger: GGGAAGATCGCTACTGAAGCAATAGAAAACTTCCGA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAAATAATAGGCATACCTaGTCATGTCTTCCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFINNRHT*SCLPPD
Trigger: ATCTGGAGGAAGACATGACCAGGTATGCCTATTATT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000622132.5
CDS-3UTR CCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAATAATAGGCATACCTaGTCATGTCTTCCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNNNRHT*SCLPPD
Trigger: ATCTGGAGGAAGACATGACCAGGTATGCCTATTATT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000622132.5
CDS-3UTR CCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAAAATGCTTCAATGCTTaGAGATGCCTGTCCAACACT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRKCFNA*RCLSNT
Trigger: AGTGTTGGACAGGCATCTCCAAGCATTGAAGCATTT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATCCCTTAATATTATCTaGTTTGTGCCCACTCTTCGA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLSLNII*FVPTLR
Trigger: TCGAAGAGTGGGCACAAACCAGATAATATTAAGGGA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATCCCTTAATATTATCTaGTTTGTGCCCACTCTTCGA +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSLNII*FVPTLR
Trigger: TCGAAGAGTGGGCACAAACCAGATAATATTAAGGGA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATGTTTTCAGCTATCGTaGTGGCAAACAATACAGGTT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLCFQLS*WQTIQV
Trigger: AACCTGTATTGTTTGCCACCACGATAGCTGAAAACA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATGTTTTCAGCTATCGTaGTGGCAAACAATACAGGTT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFICFQLS*WQTIQV
Trigger: AACCTGTATTGTTTGCCACCACGATAGCTGAAAACA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACAAAGAGTTTCTGTATaGTACCTGCAAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRQRVSV*YLQTLS
Trigger: GCTCAGAGTTTGCAGGTACCATACAGAAACTCTTTG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAATGATCATGATGATGTaGGCTGCTGATATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIMIMMM*AADILA
Trigger: AGCCAAAATATCAGCAGCCCACATCATCATGATCAT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAATGATCATGATGATGTaGGCTGCTGATATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKMIMMM*AADILA
Trigger: AGCCAAAATATCAGCAGCCCACATCATCATGATCAT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGGGTGTCAAATTTATaGGGCAGTTTCATGATAAAG +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNRVSNL*GSFMIK
Trigger: CTTTATCATGAAACTGCCTCATAAATTTGACACCCT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGAGGGTGTCAAATTTATaGGGCAGTTTCATGATAAAG +
Preference number: 4 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMRVSNL*GSFMIK
Trigger: CTTTATCATGAAACTGCCTCATAAATTTGACACCCT...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATTCATGAGTTCATCATaGTTTCCTTTCTCCACAATG +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIFMSSS*FPFSTM
Trigger: CATTGTGGAGAAAGGAAATCATGATGAACTCATGAA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTCAACTTCACCAAATGTaGCATTTCCTTCCAATGTGT +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFQLHQM*HFLPMC
Trigger: ACACATTGGAAGGAAATGTCACATTTGGTGAAGTTG...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR TCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAATATTTATTAGGCAGTaGCTCGATGAAGGCATGTAT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKIFIRQ*LDEGMY
Trigger: ATACATGCCTTCATCGAGTCACTGCCTAATAAATAT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGACTCTGAACTTGACTaGGGAAATGTTAAACAGATA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLDSELD*GNVKQI
Trigger: TATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATTCAACTTCATTTCCTaGTGTCTGCATTGTGACAAG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRFNFIS*CLHCDK
Trigger: CTTGTCACAATGCAGACAGCAGGAAATGAAGTTGAA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATTGCAAATGCTGGTTaGAGGCCTCCATTTATAATG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRIANAG*RPPFIM
Trigger: CATTATAAATGGAGGCCTGCAACCAGCATTTGCAAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAAATATTATTGCAAATaGTGGTTGCAGGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNKYYCK*WLQASI
Trigger: AATGGAGGCCTGCAACCAGCATTTGCAATAATATTT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAAATATTATTGCAAATaGTGGTTGCAGGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKKYYCK*WLQASI
Trigger: AATGGAGGCCTGCAACCAGCATTTGCAATAATATTT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTCCTGTCCCAAGATTTaGTATATTCTGGGTAATTAC +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSCPKI*YILGNY
Trigger: GTAATTACCCAGAATATAGCAAATCTTGGGACAGGA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAAACAACTCCTGCTATTaGAATGATGGGTACAATTGC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRNNSCY*NDGYNC
Trigger: GCAATTGTACCCATCATTGCAATAGCAGGAGTTGTT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGGAAAAATACATCATTaGCTGGGTGAAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIGKIHH*LGEGKC
Trigger: ACATTTTCCTTCACCCAGGCAATGATGTATTTTTCC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAACCTTAATGTGGAAATaGAAGAATCAGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLTLMWK*KNQQDQ
Trigger: TTGATCCTGCTGATTCTTGCATTTCCACATTAAGGT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATATTATTGCAAATGCTaGTTGCAGGCCTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLYYCKC*LQASIY
Trigger: ATAAATGGAGGCCTGCAACCAGCATTTGCAATAATA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATATTATTGCAAATGCTaGTTGCAGGCCTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKYYCKC*LQASIY
Trigger: ATAAATGGAGGCCTGCAACCAGCATTTGCAATAATA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAGATTTGCTATATTCTaGGTAATTACAGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLRFAIF*VITASL
Trigger: CAGGCTTGCTGTAATTACCCAGAATATAGCAAATCT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAGATTTGCTATATTCTaGGTAATTACAGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKRFAIF*VITASL
Trigger: CAGGCTTGCTGTAATTACCCAGAATATAGCAAATCT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATGATCATGATGATGTaGGCTGCTGATATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRMIMMM*AADILA
Trigger: AGCCAAAATATCAGCAGCCCACATCATCATGATCAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATTCATGAGTTCATCATaGTTTCCTTTCTCCACAATG +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRFMSSS*FPFSTM
Trigger: CATTGTGGAGAAAGGAAATCATGATGAACTCATGAA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR TCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGACTCTGAACTTGACTaGGGAAATGTTAAACAGATA +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRDSELD*GNVKQI
Trigger: TATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATCCTGTCCCAAGATTTaGTATATTCTGGGTAATTAC +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRSCPKI*YILGNY
Trigger: GTAATTACCCAGAATATAGCAAATCTTGGGACAGGA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAATTCCAAAGATGTGTaGTTTCCTCAAAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNNSKDV*FPQRVS
Trigger: AGAAACTCTTTGAGGAAAGCACACATCTTTGGAATT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGGAAAAATACATCATTaGCTGGGTGAAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRGKIHH*LGEGKC
Trigger: ACATTTTCCTTCACCCAGGCAATGATGTATTTTTCC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAACTTCTTTTCGAGATaGGTAACTGAAGTGAACATT +
Preference number: 4 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKNFFSR*VTEVNI
Trigger: AATGTTCACTTCAGTTACCCATCTCGAAAAGAAGTT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTTATTATTGCAAATGCTaGTTGCAGGCCTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFYYCKC*LQASIY
Trigger: ATAAATGGAGGCCTGCAACCAGCATTTGCAATAATA...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
3UTR CAA 72 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTaGACTGAGGAAATGTTAAACAGATACCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: VPLITKSLKTLN*TEEMLNRYLFI
Trigger: TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR GCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAAATTCCAAAGATGTGTaGTTTCCTCAAAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRNSKDV*FPQRVS
Trigger: AGAAACTCTTTGAGGAAAGCACACATCTTTGGAATT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAAACTTCTTTTCGAGATaGGTAACTGAAGTGAACATT +
Preference number: 4 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRNFFSR*VTEVNI
Trigger: AATGTTCACTTCAGTTACCCATCTCGAAAAGAAGTT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CCA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTAACTTCTTTTCGAGATaGGTAACTGAAGTGAACATT +
Preference number: 4 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFNFFSR*VTEVNI
Trigger: AATGTTCACTTCAGTTACCCATCTCGAAAAGAAGTT...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS CCA 90 bp TTTGAGCTTGGAAGAGCCGCTACTCGAATGAGCTCAGGCTTCCTGTaGCAAAGAGAGCGAAGCGGCTGTGCTCAGCCCACGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: FELGRAATRMSSGFL*QRERSGCAQPTPRR
Trigger: GCGCCGGGGCGTGGGCTGAGCACAGCCGCTTCGCTCTCTTTGCCACAGGAAGCCTGAGCTCATTCGAGTAGCGGCTCTTCCAAGCTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000476862.1
ENST00000543898.5
CDS TCA 90 bp AGGATGGGCTCCTGGGACACGATGCCCAGGTGTGCTCGGAGCCACTaGACATTCAGTCGCTTTATTTCTTTGCCATCAAGCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: RMGSWDTMPRCARSH*TFSRFISLPSSSTF
Trigger: GAAAGTGCTGCTTGATGGCAAAGAAATAAAGCGACTGAATGTTCAGTGGCTCCGAGCACACCTGGGCATCGTGTCCCAGGAGCCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265724.8
ENST00000475929.5
ENST00000488737.6
ENST00000543898.5
ENST00000622132.5
CDS TCA 90 bp AGCCTCACCACAGATGACTGCTCCCGGCCCGGATTGACTGAATGCTaGTTCCTCGAGAAACTGCGAAACAGGTTGAATTTCCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SLTTDDCSRPGLTEC*FLEKLRNRLNFQEE
Trigger: TTCCTCCTGGAAATTCAACCTGTTTCGCAGTTTCTCGAGGAATCAGCATTCAGTCAATCCGGGCCGGGAGCAGTCATCTGTGGTGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000476862.1
ENST00000543898.5
CDS TCA 90 bp TTAGTGGAAAGACCTAAAGGAAACGAACAGCGGCCTCTGCTTCTTTaGGCTTGGAAGAGCCGCTACTCGAATGAGCTCAGGCTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LVERPKGNEQRPLLL*AWKSRYSNELRLPV
Trigger: CACAGGAAGCCTGAGCTCATTCGAGTAGCGGCTCTTCCAAGCTCAAAGAAGCAGAGGCCGCTGTTCGTTTCCTTTAGGTCTTTCCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000476862.1
ENST00000543898.5
CDS TCA 90 bp GGAAAGACCACAGATGACTGCTCCCGGCCCGGATTGACTGAATGCTaGTTCCTCGAGAAACTGCGAAACAGGTTGAATTTCCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GKTTDDCSRPGLTEC*FLEKLRNRLNFQEE
Trigger: TTCCTCCTGGAAATTCAACCTGTTTCGCAGTTTCTCGAGGAATCAGCATTCAGTCAATCCGGGCCGGGAGCAGTCATCTGTGGTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416177.1
CDS-3UTR CAA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCACCGACCTCGCGCTCCTaGGAACGGCCACCAAGACGT +
Preference number: 5 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSPTSRS*ERPPRR
Trigger: ACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCGG...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS TCA 90 bp AAGATCCATTCCGACCTCGCGCTCCTTGGAACGGCCACCAAGACGTaGAATTTTGGAAGAAGATACTCCGACTTTAGTGGAAAGACCACA +
Preference number: 5 (lower is better)
Translates to: KIHSDLALLGTATKT*NFGRRYSDFSGKTT
Trigger: TGTGGTCTTTCCACTAAAGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCGGAATGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416177.1
CDS CCA 90 bp GTCATTTCTCCAAACACCAGCATCATGAGAGGAAGTCCAGCCCCATaGATGATGGCAGCCAAAGTTCCCACCACCATATACAACTTGTCA +
Preference number: 5 (lower is better)
Translates to: VISPNTSIMRGSPAP*MMAAKVPTTIYNLS
Trigger: TGACAAGTTGTATATGGTGGTGGGAACTTTGGCTGCCATCATCCATGGGGCTGGACTTCCTCTCATGATGCTGGTGTTTGGAGAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCCGACCTCGCGCTCCTaGGAACGGCCACCAAGACGT +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNPTSRS*ERPPRR
Trigger: ACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCGG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACCGACCTCGCGCTCCTaGGAACGGCCACCAAGACGT +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLPTSRS*ERPPRR
Trigger: ACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCGG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGGCGGCCTCTGCTTCTTaGAGCTTGGAAGAGCCGCTA +
Preference number: 5 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMAASAS*SLEEPL
Trigger: TAGCGGCTCTTCCAAGCTCAAAGAAGCAGAGGCCGC...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS CCA 90 bp GGTATACTTTCATCCAGAGCCTCTTTGGTACTAAGCTTTCTGTCTTaGGCTTGTGATCCACGGACACTCCTACGAGTTGATCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: GILSSRASLVLSFLS*ACDPRTLLRVDLFL
Trigger: AAGAAAAAGATCAACTCGTAGGAGTGTCCGTGGATCACAAGCCCAAGACAGAAAGCTTAGTACCAAAGAGGCTCTGGATGAAAGTATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGCGGCCTCTGCTTCTTaGAGCTTGGAAGAGCCGCTA +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRAASAS*SLEEPL
Trigger: TAGCGGCTCTTCCAAGCTCAAAGAAGCAGAGGCCGC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTTTCTTTGCTCCTCCATaGCGGTCCCCTTCAAGATCC +
Preference number: 5 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSFFAPP*RSPSRS
Trigger: GGATCTTGAAGGGGACCGCAATGGAGGAGCAAAGAA...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAATGTATCGGAGCCGCTaGGTGAGGATCTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIMYRSR*VRISPA
Trigger: AGCTGGAGAGATCCTCACCAAGCGGCTCCGATACAT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS TCA 90 bp AAGTTGACACTCATATACCTTCATTCAAGCGGTGATATTTCCATTTaGAGTGACTGCCACAATCTGCACCTTCTTGTCCTCCGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: KLTLIYLHSSGDISI*SDCHNLHLLVLRSH
Trigger: ATGAGAGCGGAGGACAAGAAGGTGCAGATTGTGGCAGTCACTTCAAATGGAAATATCACCGCTTGAATGAAGGTATATGAGTGTCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTTCTTTGCTCCTCCATaGCGGTCCCCTTCAAGATCC +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNFFAPP*RSPSRS
Trigger: GGATCTTGAAGGGGACCGCAATGGAGGAGCAAAGAA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATTCTTTGCTCCTCCATaGCGGTCCCCTTCAAGATCC +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKFFAPP*RSPSRS
Trigger: GGATCTTGAAGGGGACCGCAATGGAGGAGCAAAGAA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATGTATCGGAGCCGCTaGGTGAGGATCTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRMYRSR*VRISPA
Trigger: AGCTGGAGAGATCCTCACCAAGCGGCTCCGATACAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACATGAAGGCATGTATGTaGGCCTCCTTTGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNMKACM*ASFAAL
Trigger: GAGGGCAGCAAAGGAGGCCAACATACATGCCTTCAT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAATGAAGGCATGTATGTaGGCCTCCTTTGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLMKACM*ASFAAL
Trigger: GAGGGCAGCAAAGGAGGCCAACATACATGCCTTCAT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAGCTATGGCAATGCGTaGTTTCTGGCCACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSYGNA*FLATRE
Trigger: CTCTCTGGTGGCCAGAAACAACGCATTGCCATAGCT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAGCTATGGCAATGCGTaGTTTCTGGCCACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLSYGNA*FLATRE
Trigger: CTCTCTGGTGGCCAGAAACAACGCATTGCCATAGCT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGCTATGGCAATGCGTaGTTTCTGGCCACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSYGNA*FLATRE
Trigger: CTCTCTGGTGGCCAGAAACAACGCATTGCCATAGCT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTCTGCTTCTTTGAGCTaGGAAGAGCCGCTACTCGAA +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSASLS*EEPLLE
Trigger: TTCGAGTAGCGGCTCTTCCAAGCTCAAAGAAGCAGA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTAAAAGTTCTTCTTCTTaGCTCCTCCATTGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSKSSSS*LLHCGP
Trigger: GGGACCGCAATGGAGGAGCAAAGAAGAAGAACTTTT...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATGAAGGCATGTATGTaGGCCTCCTTTGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRMKACM*ASFAAL
Trigger: GAGGGCAGCAAAGGAGGCCAACATACATGCCTTCAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAATGTTCTGGCTTCCGTaGCACCTCTCTTTTATCTGG +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIMFWLP*HLSFIW
Trigger: CCAGATAAAAGAGAGGTGCAACGGAAGCCAGAACAT...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACATGTTCTGGCTTCCGTaGCACCTCTCTTTTATCTGG +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNMFWLP*HLSFIW
Trigger: CCAGATAAAAGAGAGGTGCAACGGAAGCCAGAACAT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAAAAGTTCTTCTTCTTaGCTCCTCCATTGCGGTCCC +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKKSSSS*LLHCGP
Trigger: GGGACCGCAATGGAGGAGCAAAGAAGAAGAACTTTT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATATAGCCCCTTTAACTaGAGCAGCATCATTGGCGAG +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLYSPFN*SSIIGE
Trigger: CTCGCCAATGATGCTGCTCAAGTTAAAGGGGCTATA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATATAGCCCCTTTAACTaGAGCAGCATCATTGGCGAG +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIYSPFN*SSIIGE
Trigger: CTCGCCAATGATGCTGCTCAAGTTAAAGGGGCTATA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCAATATTCACAGGCAGTTaGGACAAGATGACTCCAGTC +
Preference number: 5 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSIFTGS*DKMTPV
Trigger: GACTGGAGTCATCTTGTCCAAACTGCCTGTGAATAT...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAATGAAGATAGTATCTTaGCCCAGACAGCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKMKIVS*PRQQLT
Trigger: TGTCAGCTGCTGTCTGGGCAAAGATACTATCTTCAT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACATGAAGATAGTATCTTaGCCCAGACAGCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNMKIVS*PRQQLT
Trigger: TGTCAGCTGCTGTCTGGGCAAAGATACTATCTTCAT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACCTACTGCTCCAGCTTTaGCATACGCTAAGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNLLLQL*HTLRVL
Trigger: AAGAACTCTTAGCGTATGCAAAAGCTGGAGCAGTAG...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACTACTGCTCCAGCTTTaGCATACGCTAAGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKLLLQL*HTLRVL
Trigger: AAGAACTCTTAGCGTATGCAAAAGCTGGAGCAGTAG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATCATCCAGAGCCTCTTaGGTACTAAGCTTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSSRAS*VLSFLS
Trigger: AGACAGAAAGCTTAGTACCAAAGAGGCTCTGGATGA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATCATCCAGAGCCTCTTaGGTACTAAGCTTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISSRAS*VLSFLS
Trigger: AGACAGAAAGCTTAGTACCAAAGAGGCTCTGGATGA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTTATAGCCCCTTTAACTaGAGCAGCATCATTGGCGAG +
Preference number: 5 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFYSPFN*SSIIGE
Trigger: CTCGCCAATGATGCTGCTCAAGTTAAAGGGGCTATA...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGATCTGTGTTTTGGGTTaGAGAGCCACCTTAATGTGG +
Preference number: 5 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMICVLG*RATLMW
Trigger: CCACATTAAGGTGGCTCTCAAACCCAAAACACAGAT...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATCAGAAGGATCACTTTaGGAAGAGGCCAATTACTGG +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFISEGSL*EEANYW
Trigger: CCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTGA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS GCA 90 bp TCACCAACTTGTCTATACTCTGACAACATTAAAGATTTGCCTCTCTaGTGCAGTCTGTTCTATATGTATCTTTTATCTGGTTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SPTCLYSDNIKDLPL*CSLFYMYLLSGCFL
Trigger: CAGGAAGCAACCAGATAAAAGATACATATAGAACAGACTGCAGCAGAGAGGCAAATCTTTAATGTTGTCAGAGTATAGACAAGTTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAAACTGCGAAACAGGTaGAATTTCCAGGAGGAATGT +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNKLRNR*NFQEEC
Trigger: ACATTCCTCCTGGAAATTCAACCTGTTTCGCAGTTT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAAACTGCGAAACAGGTaGAATTTCCAGGAGGAATGT +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLKLRNR*NFQEEC
Trigger: ACATTCCTCCTGGAAATTCAACCTGTTTCGCAGTTT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000543898.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACCAAGACGTGAAATTTaGGAAGAAGATACTCCGACT +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIPRREI*EEDTPT
Trigger: AGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACCAAGACGTGAAATTTaGGAAGAAGATACTCCGACT +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLPRREI*EEDTPT
Trigger: AGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATCTAATTTTGTGTATTaGTCTTCCAGCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSNFVY*SSSCQA
Trigger: TGCCTGGCAGCTGGAAGACAAATACACAAAATTAGA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTCTAATTTTGTGTATTaGTCTTCCAGCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSNFVY*SSSCQA
Trigger: TGCCTGGCAGCTGGAAGACAAATACACAAAATTAGA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265724.8
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATGAAGATAGTATCTTaGCCCAGACAGCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRMKIVS*PRQQLT
Trigger: TGTCAGCTGCTGTCTGGGCAAAGATACTATCTTCAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTGGACACTCCTACGAGTaGATCTTTTTCTTATTAGAC +
Preference number: 5 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSGHSYE*IFFLLD
Trigger: GTCTAATAAGAAAAAGATCAACTCGTAGGAGTGTCC...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAGTCGCTTTATTTCTTaGCCATCAAGCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLSRFIS*PSSSTF
Trigger: GAAAGTGCTGCTTGATGGCAAAGAAATAAAGCGACT...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAAAGTCGCTTTATTTCTTaGCCATCAAGCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKSRFIS*PSSSTF
Trigger: GAAAGTGCTGCTTGATGGCAAAGAAATAAAGCGACT...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGTCGCTTTATTTCTTaGCCATCAAGCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNSRFIS*PSSSTF
Trigger: GAAAGTGCTGCTTGATGGCAAAGAAATAAAGCGACT...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp ATTCCAATTGAGAGAAGATATATTCACAGGCAGTTTGGACAAGATGACTCCAGTCTGAAGACTCTGAACTaGACTGAGGAAATGTTAAAC +
Preference number: 5 (lower is better)
Translates to: IPIERRYIHRQFGQDDSSLKTLN*TEEMLN
Trigger: GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAG...ACTGGAGTCATCTTGTCCAAACTGCCTGTGAATATATCTTCTCTCAATTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGATATCGATCTGTGTTTaGGGTTTGAGAGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMISICV*GLRATL
Trigger: TAAGGTGGCTCTCAAACCCAAAACACAGATCGATAT...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGACCAAGACGTGAAATTTaGGAAGAAGATACTCCGACT +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRPRREI*EEDTPT
Trigger: AGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGG...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGAATACAGTGAGTACTaGTCCAATAGAATATTCCCC +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIEYSEY*SNRIFP
Trigger: GGGGAATATTCTATTGGACAAGTACTCACTGTATTC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAGAATACAGTGAGTACTaGTCCAATAGAATATTCCCC +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLEYSEY*SNRIFP
Trigger: GGGGAATATTCTATTGGACAAGTACTCACTGTATTC...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp AAATCTTATATCGATCTGTGTTTTGGGTTTGAGAGCCACCTTAATGTGGAAATGGAATACAGTGAGTACTaGTCCAATAGAATATTCCCC +
Preference number: 5 (lower is better)
Translates to: KSYIDLCFGFESHLNVEMEYSEY*SNRIFP
Trigger: GGGGAATATTCTATTGGACAAGTACTCACTGTATTC...CATTTCCACATTAAGGTGGCTCTCAAACCCAAAACACAGATCGATATAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATAGGACACTCCTACGAGTaGATCTTTTTCTTATTAGAC +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIGHSYE*IFFLLD
Trigger: GTCTAATAAGAAAAAGATCAACTCGTAGGAGTGTCC...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTATATTGCAAATGCTGGTaGCAGGCCTCCATTTATAAT +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLYCKCW*QASIYN
Trigger: ATTATAAATGGAGGCCTGCAACCAGCATTTGCAATA...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CAGAAGGATCACTTTTGGAAGAGGCCAATTACTGGCAAAAGTGATTCATTATCACTTATCTTTCAGTGCTaGTCCAGACAACATTTTCAT +
Preference number: 5 (lower is better)
Translates to: QKDHFWKRPITGKSDSLSLIFQC*SRQHFH
Trigger: ATGAAAATGTTGTCTGGACAAGCACTGAAAGATAAG...TGATAATGAATCACTTTTGCCAGTAATTGGCCTCTTCCAAAAGTGATCCTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATACTGAAGACTCTGAACTaGACTGAGGAAATGTTAAAC +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFILKTLN*TEEMLN
Trigger: GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAG...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACTGAAGACTCTGAACTaGACTGAGGAAATGTTAAAC +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLLKTLN*TEEMLN
Trigger: GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATACCTCTTCATATGGATCTTGAATCATTaGAAGACATTTCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SLKTLNLTEEMLNRYLFIWILNH*KTFPRH
Trigger: ATGCCTTGGAAATGTCTTCAAATGATTCAAGATCCA...TATGAAGAGGTATCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAATGGATCTTGAATCATTaGAAGACATTTCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKWILNH*KTFPRH
Trigger: ATGCCTTGGAAATGTCTTCAAATGATTCAAGATCCA...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACTGGATCTTGAATCATTaGAAGACATTTCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: PLITKSLKTLNLTEEMLNWILNH*KTFPRH
Trigger: ATGCCTTGGAAATGTCTTCAAATGATTCAAGATCCA...GTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAGGACACTCCTACGAGTaGATCTTTTTCTTATTAGAC +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRGHSYE*IFFLLD
Trigger: GTCTAATAAGAAAAAGATCAACTCGTAGGAGTGTCC...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGATATTGCAAATGCTGGTaGCAGGCCTCCATTTATAAT +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRYCKCW*QASIYN
Trigger: ATTATAAATGGAGGCCTGCAACCAGCATTTGCAATA...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp CCAGATGGTTCTGTAAGACCCAATGTGAATAGACATATACAACAGGAATTATTTTATTGCAAATGCTGGTaGCAGGCCTCCATTTATAAT +
Preference number: 5 (lower is better)
Translates to: PDGSVRPNVNRHIQQELFYCKCW*QASIYN
Trigger: ATTATAAATGGAGGCCTGCAACCAGCATTTGCAATA...AAATAATTCCTGTTGTATATGTCTATTCACATTGGGTCTTACAGAACCATCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622132.5
CDS-3UTR CAA 90 bp TGCTACTTCTATAATCTTTTAGCAAGGCAGTCAGTTACAGTCCAAATGGGAAAACTTATCTTTCAGTGCTaGTCCAGACAACATTTTCAT +
Preference number: 5 (lower is better)
Translates to: CYFYNLLARQSVTVQMGKLIFQC*SRQHFH
Trigger: ATGAAAATGTTGTCTGGACAAGCACTGAAAGATAAG...TTTTCCCATTTGGACTGTAACTGACTGCCTTGCTAAAAGATTATAGAAGTAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp GTTCCTTTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTACTTATCTTTCAGTGCTaGTCCAGACAACATTTTCAT +
Preference number: 5 (lower is better)
Translates to: VPLITKSLKTLNLTEEMLLIFQC*SRQHFH
Trigger: ATGAAAATGTTGTCTGGACAAGCACTGAAAGATAAG...TAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAAAGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS-3UTR CAA 90 bp TTAATTACGAAGTCTCTGAAGACTCTGAACTTGACTGAGGAAATGTTAAACAGAATTCCTTCATTAATCTaGGAGACATCACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: LITKSLKTLNLTEEMLNRIPSLI*ETSLVM
Trigger: CATGACCAGTGATGTCTCCAAGATTAATGAAGGAAT...TCTGTTTAACATTTCCTCAGTCAAGTTCAGAGTCTTCAGAGACTTCGTAATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543898.5
CDS CCA 90 bp ACTGAAGTGAACATTTCTGAATTCCAAATTTCCCTTAATATTATCTaGTTTGTGCCCACTCTTCGAATAGCTGTCAATACTTGGCTTATT +
Preference number: 5 (lower is better)
Translates to: TEVNISEFQISLNII*FVPTLRIAVNTWLI
Trigger: AATAAGCCAAGTATTGACAGCTATTCGAAGAGTGGGCACAAACCAGATAATATTAAGGGAAATTTGGAATTCAGAAATGTTCACTTCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS GCA 72 bp CTCAGGCTTCCTGTGGCAAAGAGAGCGAAGCGGCTGTaGTCAGCCCACGCCCCGGCGCTGTTCCTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: LRLPVAKRAKRL*SAHAPALFLPS
Trigger: GCTGGGCAGGAACAGCGCCGGGGCGTGGGCTGAGCACAGCCGCTTCGCTCTCTTTGCCACAGGAAGCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000476862.1
ENST00000543898.5
CDS CCA 72 bp GGAAGAGCCGCTACTCGAATGAGCTCAGGCTTCCTGTaGCAAAGAGAGCGAAGCGGCTGTGCTCAGCCCACG +
Preference number: 6 (lower is better)
Translates to: GRAATRMSSGFL*QRERSGCAQPT
Trigger: CGTGGGCTGAGCACAGCCGCTTCGCTCTCTTTGCCACAGGAAGCCTGAGCTCATTCGAGTAGCGGCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000476862.1
ENST00000543898.5
CDS TCA 72 bp TCAGCCTCACCACAGATGACTGCTCCCGGCCCGGATTaGCTGAATGCTGATTCCTCGAGAAACTGCGAAACA +
Preference number: 6 (lower is better)
Translates to: SASPQMTAPGPD*LNADSSRNCET
Trigger: TGTTTCGCAGTTTCTCGAGGAATCAGCATTCAGTCAATCCGGGCCGGGAGCAGTCATCTGTGGTGAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000476862.1
ENST00000543898.5
CDS TCA 72 bp TCCTGGGACACGATGCCCAGGTGTGCTCGGAGCCACTaGACATTCAGTCGCTTTATTTCTTTGCCATCAAGC +
Preference number: 6 (lower is better)
Translates to: SWDTMPRCARSH*TFSRFISLPSS
Trigger: GCTTGATGGCAAAGAAATAAAGCGACTGAATGTTCAGTGGCTCCGAGCACACCTGGGCATCGTGTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265724.8
ENST00000475929.5
ENST00000488737.6
ENST00000543898.5
ENST00000622132.5
CDS TCA 72 bp GTGGAAAGACCACAGATGACTGCTCCCGGCCCGGATTaGCTGAATGCTGATTCCTCGAGAAACTGCGAAACA +
Preference number: 6 (lower is better)
Translates to: VERPQMTAPGPD*LNADSSRNCET
Trigger: TGTTTCGCAGTTTCTCGAGGAATCAGCATTCAGTCAATCCGGGCCGGGAGCAGTCATCTGTGGTCTTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416177.1
CDS TCA 72 bp TCCGACCTCGCGCTCCTTGGAACGGCCACCAAGACGTaGAATTTTGGAAGAAGATACTCCGACTTTAGTGGA +
Preference number: 6 (lower is better)
Translates to: SDLALLGTATKT*NFGRRYSDFSG
Trigger: TCCACTAAAGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265724.8
ENST00000416177.1
ENST00000543898.5
ENST00000622132.5
CDS CCA 72 bp ACTGCGAAACAGGTTGAATTTCCAGGAGGAATGTTCTaGCTTCCGTTGCACCTCTCTGGTCCCCTTGCAAGT +
Preference number: 6 (lower is better)
Translates to: TAKQVEFPGGMF*LPLHLSGPLAS
Trigger: ACTTGCAAGGGGACCAGAGAGGTGCAACGGAAGCCAGAACATTCCTCCTGGAAATTCAACCTGTTTCGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS TCA 72 bp ACAGATGACTGCTCCCGGCCCGGATTGACTGAATGCTaGTTCCTCGAGAAACTGCGAAACAGGTTGAATTTC +
Preference number: 6 (lower is better)
Translates to: TDDCSRPGLTEC*FLEKLRNRLNF
Trigger: GAAATTCAACCTGTTTCGCAGTTTCTCGAGGAATCAGCATTCAGTCAATCCGGGCCGGGAGCAGTCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265724.8
ENST00000416177.1
ENST00000476862.1
ENST00000543898.5
CDS CAA 90 bp ATTCCGACCTCGCGCTCCTTGGAACGGCCACCAAGACGTGAAATTTaGGAAGAAGATACTCCGACTTTAGTGGAAAGACCACAGATGACT +
Preference number: 6 (lower is better)
Translates to: IPTSRSLERPPRREI*EEDTPTLVERPQMT
Trigger: AGTCATCTGTGGTCTTTCCACTAAAGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416177.1
CDS CCA 72 bp TCATCCAGAGCCTCTTTGGTACTAAGCTTTCTGTCTTaGGCTTGTGATCCACGGACACTCCTACGAGTTGAT +
Preference number: 6 (lower is better)
Translates to: SSRASLVLSFLS*ACDPRTLLRVD
Trigger: ATCAACTCGTAGGAGTGTCCGTGGATCACAAGCCCAAGACAGAAAGCTTAGTACCAAAGAGGCTCTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS CAA 72 bp TCGCGCTCCTTGGAACGGCCACCAAGACGTGAAATTTaGGAAGAAGATACTCCGACTTTAGTGGAAAGACCT +
Preference number: 6 (lower is better)
Translates to: SRSLERPPRREI*EEDTPTLVERP
Trigger: AGGTCTTTCCACTAAAGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGTTCCAAGGAGCGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS CAA 72 bp TCGCGCTCCTTGGAACGGCCACCAAGACGTGAAATTTaGGAAGAAGATACTCCGACTTTAGTGGAAAGACCA +
Preference number: 6 (lower is better)
Translates to: SRSLERPPRREI*EEDTPTLVERP
Trigger: TGGTCTTTCCACTAAAGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGTTCCAAGGAGCGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416177.1
CDS CAA 72 bp CTGGCTTCCGTTGCACCTCTCTGGTCCCCTTGCAAGTaGACACTCATATACCTTCATTCAAGCGGTGATATT +
Preference number: 6 (lower is better)
Translates to: LASVAPLWSPCK*TLIYLHSSGDI
Trigger: AATATCACCGCTTGAATGAAGGTATATGAGTGTCAACTTGCAAGGGGACCAGAGAGGTGCAACGGAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS CAA 90 bp ATTCCGACCTCGCGCTCCTTGGAACGGCCACCAAGACGTGAAATTTaGGAAGAAGATACTCCGACTTTAGTGGAAAGACCTAAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: IPTSRSLERPPRREI*EEDTPTLVERPKGN
Trigger: GTTTCCTTTAGGTCTTTCCACTAAAGTCGGAGTATCTTCTTCCAAAATTTCACGTCTTGGTGGCCGTTCCAAGGAGCGCGAGGTCGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS CAA 90 bp TTAGTGCTATATTTATTAGGCAGTGACTCGATGAAGGCATGTATGTaGGCCTCCTTTGCTGCCCTCACAATCTCTTCCTGTGACACCACC +
Preference number: 6 (lower is better)
Translates to: LVLYLLGSDSMKACM*ASFAALTISSCDTT
Trigger: GGTGGTGTCACAGGAAGAGATTGTGAGGGCAGCAAAGGAGGCCAACATACATGCCTTCATCGAGTCACTGCCTAATAAATATAGCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265724.8
ENST00000475929.5
ENST00000488737.6
ENST00000543898.5
ENST00000622132.5
CDS TCA 72 bp CTGAATGCTGATTCCTCGAGAAACTGCGAAACAGGTTaGATTTCCAGGAGGAATGTTCTGGCTTCCGTTGCA +
Preference number: 6 (lower is better)
Translates to: LNADSSRNCETG*ISRRNVLASVA
Trigger: TGCAACGGAAGCCAGAACATTCCTCCTGGAAATTCAACCTGTTTCGCAGTTTCTCGAGGAATCAGCATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265724.8
ENST00000416177.1
ENST00000476862.1
ENST00000543898.5
CDS TCA 72 bp TGGCTTCCGTTGCACCTCTCTGGTCCCCTTGCAAGTTaGCACTCATATACCTTCATTCAAGCGGTGATATTT +
Preference number: 6 (lower is better)
Translates to: WLPLHLSGPLAS*HSYTFIQAVIF
Trigger: AAATATCACCGCTTGAATGAAGGTATATGAGTGTCAACTTGCAAGGGGACCAGAGAGGTGCAACGGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS CCA 72 bp ACTGCGAAACAGGTTGAATTTCCAGGAGGAATGTTCTaGCTTCCGTTGCACCTCTCTTTTATCTGGTTGCTT +
Preference number: 6 (lower is better)
Translates to: TAKQVEFPGGMF*LPLHLSFIWLL
Trigger: AAGCAACCAGATAAAAGAGAGGTGCAACGGAAGCCAGAACATTCCTCCTGGAAATTCAACCTGTTTCGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000416177.1
ENST00000543898.5
CDS TCA 72 bp CTCATATACCTTCATTCAAGCGGTGATATTTCCATTTaGAGTGACTGCCACAATCTGCACCTTCTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: LIYLHSSGDISI*SDCHNLHLLVL
Trigger: GAGGACAAGAAGGTGCAGATTGTGGCAGTCACTTCAAATGGAAATATCACCGCTTGAATGAAGGTATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS CAA 72 bp TGTCTTGGGCTTGTGATCCACGGACACTCCTACGAGTaGATCTTTTTCTTATTAGACTGGATCTTGAATCAT +
Preference number: 6 (lower is better)
Translates to: CLGLVIHGHSYE*IFFLLDWILNH
Trigger: ATGATTCAAGATCCAGTCTAATAAGAAAAAGATCAACTCGTAGGAGTGTCCGTGGATCACAAGCCCAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265724.8
ENST00000543898.5
ENST00000622132.5
CDS CCA 72 bp GATATAATTATTCCTGTCCCAAGATTTGCTATATTCTaGGTAATTACAGCAAGCCTGGAACCTATAGCCCCT +
Preference number: 6 (lower is better)
Translates to: DIIIPVPRFAIF*VITASLEPIAP
Trigger: AGGGGCTATAGGTTCCAGGCTTGCTGTAATTACCCAGAATATAGCAAATCTTGGGACAGGAATAATTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265724.8
ENST00000496821.5
ENST00000543898.5
ENST00000622132.5
CDS CCA 72 bp GATATAATTATTCCTGTCCCAAGATTTGCTATATTCTaGGTAATTACAGCAAGCCTGGAACCTATAGCCTTC +
Preference number: 6 (lower is better)
Translates to: DIIIPVPRFAIF*VITASLEPIAF
Trigger: GAAGGCTATAGGTTCCAGGCTTGCTGTAATTACCCAGAATATAGCAAATCTTGGGACAGGAATAATTATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488737.6
CDS CAA 90 bp GTAGCCATTTCACCAACTTGTCTATACTCTGACAACATTAAAGATTaGCCTCTCTGCTGCAGTCTGTTCTATATGTATCTTTTATCTGGT +
Preference number: 6 (lower is better)
Translates to: VAISPTCLYSDNIKD*PLCCSLFYMYLLSG
Trigger: ACCAGATAAAAGATACATATAGAACAGACTGCAGCAGAGAGGCAAATCTTTAATGTTGTCAGAGTATAGACAAGTTGGTGAAATGGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS CAA 72 bp TCACCAACTTGTCTATACTCTGACAACATTAAAGATTaGCCTCTCTGCTGCAGTCTGTTCTATATGTATCTT +
Preference number: 6 (lower is better)
Translates to: SPTCLYSDNIKD*PLCCSLFYMYL
Trigger: AAGATACATATAGAACAGACTGCAGCAGAGAGGCAAATCTTTAATGTTGTCAGAGTATAGACAAGTTGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476862.1
CDS GCA 72 bp TGTCTATACTCTGACAACATTAAAGATTTGCCTCTCTaGTGCAGTCTGTTCTATATGTATCTTTTATCTGGT +
Preference number: 6 (lower is better)
Translates to: CLYSDNIKDLPL*CSLFYMYLLSG
Trigger: ACCAGATAAAAGATACATATAGAACAGACTGCAGCAGAGAGGCAAATCTTTAATGTTGTCAGAGTATAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476862.1