RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA9 (Homo sapiens)

Ensembl gene IDs: ENSG00000154258

Ensembl transcript IDs: ENST00000340001.9, ENST00000453985.6, ENST00000461623.1, ENST00000482072.1, ENST00000492580.1, ENST00000495634.5, ENST00000585714.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGGCCTaGTACCTAACTGGCCATGGACCAGTAGCAGTCTGTGGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: EALLTCLPLTSCYVA*YLTGHGPVAVCGLG
Trigger: CCCCAGGCCACAGACTGCTACTGGTCCATGGCCAGTTAGGTACCAGGCCACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR GCA 90 bp GATTTGGTTGCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATaGCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTA +
Preference number: 1 (lower is better)
Translates to: DLVAGTKAAWYGLGL*PMIALTDIACCLTV
Trigger: TACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGCAACCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR GCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTaGTATGTGGCCTGGTACCTAACTGGCCATGGACCAGTAGCAGTC +
Preference number: 1 (lower is better)
Translates to: VNIHEALLTCLPLTS*YVAWYLTGHGPVAV
Trigger: GACTGCTACTGGTCCATGGCCAGTTAGGTACCAGGCCACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR CCA 90 bp TATGTGTCACGTTTTCTTTATCCGGTCTATCATTTGTGGGTATTTTaGTTGGTTCCAAGTCTTTGCTATTGTAAACAGTGCTGCAATAAA +
Preference number: 1 (lower is better)
Translates to: YVSRFLYPVYHLWVF*LVPSLCYCKQCCNK
Trigger: TTTATTGCAGCACTGTTTACAATAGCAAAGACTTGGAACCAACCAAAATACCCACAAATGATAGACCGGATAAAGAAAACGTGACACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTATGATCGCCCTCACTaGCATCGCCTGTTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTYDRPH*HRLLSH
Trigger: GTGAGACAACAGGCGATGTCAGTGAGGGCGATCATA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCACCAGTAGCAGTCTGTaGCCTGGGGCTTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCTSSSL*PGAWGP
Trigger: GGGTCCCCAAGCCCCAGGCCACAGACTGCTACTGGT...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTGCTGGGTAATCAATTaGCTCCCCTTACCCGGAAGT +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTCWVIN*LPLPGS
Trigger: ACTTCCGGGTAAGGGGAGTCAATTGATTACCCAGCA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTGCTGGCACAAAGGCTaGATGGTATGGCTTAGGCTT +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTCWHKG*MVWLRL
Trigger: AAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGCA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGGCACAAAGGCTGCATaGTATGGCTTAGGCTTATGC +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTGTKAA*YGLGLC
Trigger: GCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCATGGGATTTGGTTGCTaGCACAAAGGCTGCATGGTA +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTMGFGC*HKGCMV
Trigger: TACCATGCAGCCTTTGTGCCAGCAACCAAATCCCAT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAAAGGCTGCATGGTATaGCTTAGGCTTATGCCCTAT +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTKGCMV*LRLMPY
Trigger: ATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR TCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCATAACGTGGCTATTCTaGCAGGAGGTGGAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCITWLF*QEVELR
Trigger: CCTGAGCTCCACCTCCTGTCAGAATAGCCACGTTAT...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTGTGGGTATTTTGGTTaGTTCCAAGTCTTTGCTATT +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTCGYFG*FQVFAI
Trigger: AATAGCAAAGACTTGGAACCAACCAAAATACCCACA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCCTGCATAGTATTCCATaGTGTATATGTGTCACGTTT +
Preference number: 2 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTLHSIP*CICVTF
Trigger: AAACGTGACACATATACACCATGGAATACTATGCAG...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR GCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCATATACATGAAGCTTTaGTCACTTGCCTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCIYMKL*SLACHS
Trigger: TGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATAT...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR CAA 90 bp GTGTCACGTTTTCTTTATCCGGTCTATCATTTGTGGGTATTTTGGTaGGTTCCAAGTCTTTGCTATTGTAAACAGTGCTGCAATAAACAT +
Preference number: 2 (lower is better)
Translates to: VSRFLYPVYHLWVFW*VPSLCYCKQCCNKH
Trigger: ATGTTTATTGCAGCACTGTTTACAATAGCAAAGACTTGGAACCAACCAAAATACCCACAAATGATAGACCGGATAAAGAAAACGTGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR CCA 72 bp GCCACTCACCTCCTGCTATGTGGCCTGGTACCTAACTaGCCATGGACCAGTAGCAGTCTGTGGCCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: ATHLLLCGLVPN*PWTSSSLWPGA
Trigger: AGCCCCAGGCCACAGACTGCTACTGGTCCATGGCCAGTTAGGTACCAGGCCACATAGCAGGAGGTGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR CCA 72 bp CTCACTTGCCTGCCACTCACCTCCTGCTATGTGGCCTaGTACCTAACTGGCCATGGACCAGTAGCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: LTCLPLTSCYVA*YLTGHGPVAVC
Trigger: ACAGACTGCTACTGGTCCATGGCCAGTTAGGTACCAGGCCACATAGCAGGAGGTGAGTGGCAGGCAAGTGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR GCA 72 bp CATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTaGTATGTGGCCTGGTACCTAACTGGCCATGGACCA +
Preference number: 3 (lower is better)
Translates to: HEALLTCLPLTS*YVAWYLTGHGP
Trigger: TGGTCCATGGCCAGTTAGGTACCAGGCCACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR GCA 72 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATaGCCTATGATCGCCCTCACTGACATCGCCTGTTGT +
Preference number: 3 (lower is better)
Translates to: AGTKAAWYGLGL*PMIALTDIACC
Trigger: ACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR CCA 72 bp GAAACATGGGATTTGGTTGCTGGCACAAAGGCTGCATaGTATGGCTTAGGCTTATGCCCTATGATCGCCCTC +
Preference number: 3 (lower is better)
Translates to: ETWDLVAGTKAA*YGLGLCPMIAL
Trigger: GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGCAACCAAATCCCATGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR GCA 72 bp GTAGGAAACATGGGATTTGGTTGCTGGCACAAAGGCTaGATGGTATGGCTTAGGCTTATGCCCTATGATCGC +
Preference number: 3 (lower is better)
Translates to: VGNMGFGCWHKG*MVWLRLMPYDR
Trigger: GCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGCAACCAAATCCCATGTTTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR TCA 72 bp GTATGGCTTAGGCTTATGCCCTATGATCGCCCTCACTaGCATCGCCTGTTGTCTCACTGTAAGAAATACTAC +
Preference number: 3 (lower is better)
Translates to: VWLRLMPYDRPH*HRLLSHCKKYY
Trigger: GTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCATAAGCCTAAGCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTGTTCCTGTGTTAGTTaGCTGAGGATGATGGTTTCC +
Preference number: 3 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTCSCVS*LRMMVS
Trigger: GGAAACCATCATCCTCAGCAAACTAACACAGGAACA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR GCA 72 bp GGTTTGTTACACAGGTATACATGTGCCATGGTACTTTaGTGCACCCATCAACCCATCATCTACATCAGGTAT +
Preference number: 3 (lower is better)
Translates to: GLLHRYTCAMVL*CTHQPIIYIRY
Trigger: ATACCTGATGTAGATGATGGGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTTGTGGGTATTTTGGTaGGTTCCAAGTCTTTGCTAT +
Preference number: 3 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTLWVFW*VPSLCY
Trigger: ATAGCAAAGACTTGGAACCAACCAAAATACCCACAA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR-3UTR CAA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGAGTCAACCAGCTAAGTaGTTCTGTTTGTTTATGCTG +
Preference number: 3 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVSQPAK*FCLFML
Trigger: CAGCATAAACAAACAGAACAACTTAGCTGGTTGACT...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR GCA 72 bp TTGTTACACAGGTATACATGTGCCATGGTACTTTGCTaGACCCATCAACCCATCATCTACATCAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: LLHRYTCAMVLC*THQPIIYIRYF
Trigger: GAAATACCTGATGTAGATGATGGGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR TCA 72 bp TGTGTCCATGTATTCTCATTGTTCAATTCCCACTTATaGGTGAGAACATGCGGTGTTTGGTTTTCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: CVHVFSLFNSHL*VRTCGVWFSVP
Trigger: AGGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAATTGAACAATGAGAATACATGGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR CCA 72 bp TTCTTTATCCGGTCTATCATTTGTGGGTATTTTGGTTaGTTCCAAGTCTTTGCTATTGTAAACAGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: FFIRSIICGYFG*FQVFAIVNSAA
Trigger: TGCAGCACTGTTTACAATAGCAAAGACTTGGAACCAACCAAAATACCCACAAATGATAGACCGGATAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR CCA 72 bp CGTTTTCTTTATCCGGTCTATCATTTGTGGGTATTTTaGTTGGTTCCAAGTCTTTGCTATTGTAAACAGTGC +
Preference number: 3 (lower is better)
Translates to: RFLYPVYHLWVF*LVPSLCYCKQC
Trigger: GCACTGTTTACAATAGCAAAGACTTGGAACCAACCAAAATACCCACAAATGATAGACCGGATAAAGAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR CCA 72 bp TATGTGTCACGTTTTCTTTATCCGGTCTATCATTTGTaGGTATTTTGGTTGGTTCCAAGTCTTTGCTATTGT +
Preference number: 3 (lower is better)
Translates to: YVSRFLYPVYHL*VFWLVPSLCYC
Trigger: ACAATAGCAAAGACTTGGAACCAACCAAAATACCCACAAATGATAGACCGGATAAAGAAAACGTGACACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCATTGCACAGACCTGCTaGCTCCAGAGCGCCACGCCA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALIAQTC*LQSATP
Trigger: TGGCGTGGCGCTCTGGAGGCAGCAGGTCTGTGCAAT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGCTATTGCACAGACCTaGTGCCTCCAGAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALAIAQT*CLQSAT
Trigger: CGTGGCGCTCTGGAGGCAGCAGGTCTGTGCAATAGC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGTGGCCCGAATCACCTaGCACATTTGCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALVARIT*HICCCP
Trigger: GGGGCAGCAGCAAATGTGGCAGGTGATTCGGGCCAC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGCTTCCCATTGGATATaGACACCTTCCTGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALASHWI*TPSCPP
Trigger: TGGCGGACAGGAAGGTGTTCATATCCAATGGGAAGC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTATGATCGCCCTCACTaGCATCGCCTGTTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALYDRPH*HRLLSH
Trigger: GTGAGACAACAGGCGATGTCAGTGAGGGCGATCATA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTGCTGGGTAATCAATTaGCTCCCCTTACCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALCWVIN*LPLPGS
Trigger: ACTTCCGGGTAAGGGGAGTCAATTGATTACCCAGCA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTATTGCACAGACCTGCTaGCTCCAGAGCGCCACGCCA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTIAQTC*LQSATP
Trigger: TGGCGTGGCGCTCTGGAGGCAGCAGGTCTGTGCAAT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCACGTGTATACAATGCTaGGAATCCCAGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALTCIQC*ESQDPP
Trigger: TGGGGGATCCTGGGATTCCCAGCATTGTATACACGT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGGCACAAAGGCTGCATaGTATGGCTTAGGCTTATGC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALGTKAA*YGLGLC
Trigger: GCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCACAGGCCCCAGGGTGTaGTGTTCCCCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTTGPRV*CSPPCV
Trigger: GACACAGGGAGGGGAACACCACACCCTGGGGCCTGT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATACAGGCCCCAGGGTGTaGTGTTCCCCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDTGPRV*CSPPCV
Trigger: GACACAGGGAGGGGAACACCACACCCTGGGGCCTGT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGACCAGTAGCAGTCTGTaGCCTGGGGCTTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVTSSSL*PGAWGP
Trigger: GGGTCCCCAAGCCCCAGGCCACAGACTGCTACTGGT...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTAGAGCCCATGTTTGCTaGCCCACGCTCATGCGTCTC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTRAHVC*PTLMRL
Trigger: GAGACGCATGAGCGTGGGTCAGCAAACATGGGCTCT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCAAGACGTGTATACAATaGTGGGAATCCCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALKTCIQ*WESQDP
Trigger: GGGATCCTGGGATTCCCAGCATTGTATACACGTCTT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATGCTATTGCACAGACCTaGTGCCTCCAGAGCGCCACG +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDAIAQT*CLQSAT
Trigger: CGTGGCGCTCTGGAGGCAGCAGGTCTGTGCAATAGC...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTGGAGTGAAAGAGGCTaGCATCGGTATCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALWSERG*HRYPEE
Trigger: TTCTTCTGGATACCGATGGCAGCCTCTTTCACTCCA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGTGGCCCGAATCACCTaGCACATTTGCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTVARIT*HICCCP
Trigger: GGGGCAGCAGCAAATGTGGCAGGTGATTCGGGCCAC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCATGGGATTTGGTTGCTaGCACAAAGGCTGCATGGTA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALMGFGC*HKGCMV
Trigger: TACCATGCAGCCTTTGTGCCAGCAACCAAATCCCAT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGGGGCTTGGGGACCCCTaGTCTAAGGAGTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: LGTPGLRSQPAKLFCLFMGLGDP*SKESTS
Trigger: GCTGGTTGACTCCTTAGACCAGGGGTCCCCAAGCCC...CATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAGAGCCCATGTTTGCTaGCCCACGCTCATGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTRAHVC*PTLMRL
Trigger: GAGACGCATGAGCGTGGGTCAGCAAACATGGGCTCT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCATGTACACCAGTAACTaGCATCAGCTGTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALMYTSN*HQLFHH
Trigger: GTGATGGAACAGCTGATGTCAGTTACTGGTGTACAT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGAGAGCCAATCAATGTaGAGGGAGGTATTAACATGG +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALESQSM*REVLTW
Trigger: CCATGTTAATACCTCCCTTCACATTGATTGGCTCTC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGCTGAATGGTCTCTGTaGTCTTTCATCATGGGGATT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALAEWSL*SFIMGI
Trigger: AATCCCCATGATGAAAGAGCACAGAGACCATTCAGC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTGATGACCAGTAAATaGGTCAGAGGATCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALLMTSK*VRGSCG
Trigger: ACCACAGGATCCTCTGACCCATTTACTGGTCATCAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGTCTCTTGCTCATTTTaGCCTGTTTCTCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALVSCSF*PVSLRK
Trigger: TTTCCTGAGAGAAACAGGTCAAAATGAGCAAGAGAC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGGAAAGCCAGAATGCTaGCTCTCGGAGTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTGKPEC*LSESHH
Trigger: ATGATGGGACTCCGAGAGTCAGCATTCTGGCTTTCC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGAGGTATGGATTTTGTaGAGAATCCAAGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALEVWIL*RIQVGI
Trigger: AATGCCCACTTGGATTCTTCACAAAATCCATACCTC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTAGCCCTTCCGTGTTaGAACCAAAAACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALLALPC*NQKQDF
Trigger: GAAATCCTGTTTTTGGTTTCAACACGGAAGGGCTAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGCTTCCCATTGGATATaGACACCTTCCTGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTASHWI*TPSCPP
Trigger: TGGCGGACAGGAAGGTGTTCATATCCAATGGGAAGC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCCATCCACTAACCGTGTaGTGGCGATCATTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTHPLTV*WRSLRP
Trigger: GGGACGCAATGATCGCCATCACACGGTTAGTGGATG...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTATGATCGCCCTCACTaGCATCGCCTGTTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTYDRPH*HRLLSH
Trigger: GTGAGACAACAGGCGATGTCAGTGAGGGCGATCATA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTGTGATGGCGATCATTaGGTCCCCTTTCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTCDGDH*VPFPET
Trigger: GGTCTCAGGAAAGGGGACGCAATGATCGCCATCACA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGCTGCCACTCACCTCCTaGTATGTGGCCTGGTACCTA +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVLPLTS*YVAWYL
Trigger: TAGGTACCAGGCCACATAGCAGGAGGTGAGTGGCAG...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTCCTTCAGGCTCTTCTaGGTTTGGAAAAATAGCGTT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALSFRLF*VWKNSV
Trigger: AACGCTATTTTTCCAAACCCAGAAGAGCCTGAAGGA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCCCGGTCTATCATTTGTaGGTATTTTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALPVYHL*VFWLVP
Trigger: TGGAACCAACCAAAATACCCACAAATGATAGACCGG...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATGGAAAGCCAGAATGCTaGCTCTCGGAGTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDGKPEC*LSESHH
Trigger: ATGATGGGACTCCGAGAGTCAGCATTCTGGCTTTCC...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTGTGATTATAGACAGTaGCTGAACCTGATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALCDYRQ*LNLMLE
Trigger: TTCCAACATCAGGTTCAGTCACTGTCTATAATCACA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTCCATATTCGGTGCCTTaGAAGAGGATCCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTPYSVP*KRIQSS
Trigger: GCTGGATTGGATCCTCTTTCAAGGCACCGAATATGG...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTGCTGGGTAATCAATTaGCTCCCCTTACCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTCWVIN*LPLPGS
Trigger: ACTTCCGGGTAAGGGGAGTCAATTGATTACCCAGCA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGATAACGTGGCTATTCTaGCAGGAGGTGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVITWLF*QEVELR
Trigger: CCTGAGCTCCACCTCCTGTCAGAATAGCCACGTTAT...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTGTGATGGCGATCATTaGGTCCCCTTTCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTCDGDH*VPFPET
Trigger: GGTCTCAGGAAAGGGGACGCAATGATCGCCATCACA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTGGTTCCAAGTCTTTaGTATTGTAAACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALLVPSL*YCKQCC
Trigger: GCAGCACTGTTTACAATAGCAAAGACTTGGAACCAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGCCATGGTACTTTGCTaGACCCATCAACCCATCATC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTAMVLC*THQPII
Trigger: GATGATGGGTTGATGGGTGCAGCAAAGTACCATGGC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACGTGTATACAATGCTaGGAATCCCAGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTTCIQC*ESQDPP
Trigger: TGGGGGATCCTGGGATTCCCAGCATTGTATACACGT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTCTCACTGCGTCTATTaGATAGTTCAAATCCAATTC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALSHCVY*IVQIQF
Trigger: GAATTGGATTTGAACTATTCAATAGACGCAGTGAGA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATAGAGCGCCACGCCACTaGTTGTTTTCCTTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDRAPRH*LFSLFR
Trigger: ACGAAACAAGGAAAACAATCAGTGGCGTGGCGCTCT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCAGATGTTCCAAAAGTTaGGGGATAAAGCTAATACCA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALRCSKS*GIKLIP
Trigger: TGGTATTAGCTTTATCCCTCAACTTTTGGAACATCT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTTGCAATGTATGGAGTaGAAGAGGCTGCCATCGGTA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTLQCME*KRLPSV
Trigger: TACCGATGGCAGCCTCTTTCACTCCATACATTGCAA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCAGTCCATTCCAAAAATaGAGGAAGACGTGTATACAA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALSPFQK*RKTCIQ
Trigger: TTGTATACACGTCTTCCTGCATTTTTGGAATGGACT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTCATTAGTTTCTTCCTaGAGTTCATTTCTAGGCATC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALSLVSS*SSFLGI
Trigger: GATGCCTAGAAATGAACTGCAGGAAGAAACTAATGA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGCCATGGTACTTTGCTaGACCCATCAACCCATCATC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTAMVLC*THQPII
Trigger: GATGATGGGTTGATGGGTGCAGCAAAGTACCATGGC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTCTCTCAGGAAAGCTaGAGGAAAAATCTAGAAACA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALFSQES*RKNLET
Trigger: TGTTTCTAGATTTTTCCTCCAGCTTTCCTGAGAGAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGTTTTCCTTGTTTCGTaGAAGGAAGACAAAACTTGT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALVFLVS*KEDKTC
Trigger: ACAAGTTTTGTCTTCCTTCCACGAAACAAGGAAAAC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATGGCACAAAGGCTGCATaGTATGGCTTAGGCTTATGC +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDGTKAA*YGLGLC
Trigger: GCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCC...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTGGTTGTTGTCCTGGTaGGAGGAAGTATGTATTTGG +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTWLLSW*EEVCIW
Trigger: CCAAATACATACTTCCTCTCACCAGGACAACAACCA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTTGCAATGTATGGAGTaGAAGAGGCTGCCATCGGTA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDLQCME*KRLPSV
Trigger: TACCGATGGCAGCCTCTTTCACTCCATACATTGCAA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGAGAGCCAATCAATGTaGAGGGAGGTATTAACATGG +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTESQSM*REVLTW
Trigger: CCATGTTAATACCTCCCTTCACATTGATTGGCTCTC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAAGACGTGTATACAATaGTGGGAATCCCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTKTCIQ*WESQDP
Trigger: GGGATCCTGGGATTCCCAGCATTGTATACACGTCTT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTGGAGTGAAAGAGGCTaGCATCGGTATCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTWSERG*HRYPEE
Trigger: TTCTTCTGGATACCGATGGCAGCCTCTTTCACTCCA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTATGGCTTAGGCTTATaGCCTATGATCGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTYGLGL*PMIALT
Trigger: AGTGAGGGCGATCATAGGGCATAAGCCTAAGCCATA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTATGGCTTAGGCTTATaGCCTATGATCGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDYGLGL*PMIALT
Trigger: AGTGAGGGCGATCATAGGGCATAAGCCTAAGCCATA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATAACATGGGATTTGGTTaGTGGCACAAAGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDNMGFG*WHKGCM
Trigger: CATGCAGCCTTTGTGCCAGCAACCAAATCCCATGTT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTATTGTAAACAGTGCTaGAATAAACATACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALYCKQC*NKHTCA
Trigger: TGCACACGTATGTTTATTGCAGCACTGTTTACAATA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTGCTATTGTAAACAGTaGTGCAATAAACATACGTGT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALCYCKQ*CNKHTC
Trigger: ACACGTATGTTTATTGCAGCACTGTTTACAATAGCA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTGTTCATTATCTCTTaGGTAGTTTTGGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALLFIIS*VVLDSG
Trigger: ACCTGAATCCAAAACTACCCAAGAGATAATGAACAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTCCAAATGTATAAGCTaGGCCATCCCAACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTSKCIS*AIPTVK
Trigger: CTTCACTGTTGGGATGGCCCAGCTTATACATTTGGA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCATCCCTGTAAAGTTCTaGAAATTTGTTTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALIPVKF*KFVCPF
Trigger: GAAAGGACAAACAAATTTCCAGAACTTTACAGGGAT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGCTCATTGCAATGTATaGAGTGAAAGAGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTAHCNV*SERGCH
Trigger: ATGGCAGCCTCTTTCACTCCATACATTGCAATGAGC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTAAAGGCTGCATGGTATaGCTTAGGCTTATGCCCTAT +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTKGCMV*LRLMPY
Trigger: ATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAGGAAACATGGGATTTaGTTGCTGGCACAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTRKHGI*LLAQRL
Trigger: CAGCCTTTGTGCCAGCAACCAAATCCCATGTTTCCT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGGTATACATGTGCCATaGTACTTTGCTGCACCCATC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTGIHVP*YFAAPI
Trigger: GATGGGTGCAGCAAAGTACCATGGCACATGTATACC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATGGTATACATGTGCCATaGTACTTTGCTGCACCCATC +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDGIHVP*YFAAPI
Trigger: GATGGGTGCAGCAAAGTACCATGGCACATGTATACC...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGTCTCTTGCTCATTTTaGCCTGTTTCTCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTVSCSF*PVSLRK
Trigger: TTTCCTGAGAGAAACAGGTCAAAATGAGCAAGAGAC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTCAGCTGTTCCATCACTaGATGATTTGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTQLFHH*MICCDF
Trigger: GAAATCGCAACAAATCATTCAGTGATGGAACAGCTG...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCATGTACACCAGTAACTaGCATCAGCTGTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTMYTSN*HQLFHH
Trigger: GTGATGGAACAGCTGATGTCAGTTACTGGTGTACAT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGATGTACACCAGTAACTaGCATCAGCTGTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVMYTSN*HQLFHH
Trigger: GTGATGGAACAGCTGATGTCAGTTACTGGTGTACAT...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTTAGCCCTTCCGTGTTaGAACCAAAAACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTLALPC*NQKQDF
Trigger: GAAATCCTGTTTTTGGTTTCAACACGGAAGGGCTAA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGAGAATTACTCTGTCTaGTTTCCCCTCTTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTENYSV*FPLFQE
Trigger: CTCCTGAAAGAGGGGAAATCAGACAGAGTAATTCTC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATGAGAATTACTCTGTCTaGTTTCCCCTCTTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDENYSV*FPLFQE
Trigger: CTCCTGAAAGAGGGGAAATCAGACAGAGTAATTCTC...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATGCTGAATGGTCTCTGTaGTCTTTCATCATGGGGATT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDAEWSL*SFIMGI
Trigger: AATCCCCATGATGAAAGAGCACAGAGACCATTCAGC...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGTTGCAACTCCTCCTTaGGCAACAAAAGGTAATATC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTVATPP*ATKGNI
Trigger: GATATTACCTTTTGTTGCCCAAGGAGGAGTTGCAAC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTCCAAATGTATAAGCTaGGCCATCCCAACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTSKCIS*AIPTVK
Trigger: CTTCACTGTTGGGATGGCCCAGCTTATACATTTGGA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTTGATGACCAGTAAATaGGTCAGAGGATCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDLMTSK*VRGSCG
Trigger: ACCACAGGATCCTCTGACCCATTTACTGGTCATCAA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATAAAGGCTGCATGGTATaGCTTAGGCTTATGCCCTAT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDKGCMV*LRLMPY
Trigger: ATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTCCGGTCTATCATTTGTaGGTATTTTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTPVYHL*VFWLVP
Trigger: TGGAACCAACCAAAATACCCACAAATGATAGACCGG...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGCAGATCATCAGGCATTaGATACTCATAAAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVQIIRH*ILIKSP
Trigger: CGGGCTCTTTATGAGTATCCAATGCCTGATGATCTG...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGGTCTCTTGCTCATTTTaGCCTGTTTCTCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGTPGLRSQPAKLFCLFMVSCSF*PVSLRK
Trigger: TTTCCTGAGAGAAACAGGTCAAAATGAGCAAGAGAC...CATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTTTCTCCCAGAACTCTaGACCTTCACACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTFLPEL*TFTLHF
Trigger: AAAATGAAGTGTGAAGGTTCAGAGTTCTGGGAGAAA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTGTGATTATAGACAGTaGCTGAACCTGATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTCDYRQ*LNLMLE
Trigger: TTCCAACATCAGGTTCAGTCACTGTCTATAATCACA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTCCAATAGCAAAACTTaGGGATCTCCTAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTSNSKT*GSPKMA
Trigger: TGCCATTTTAGGAGATCCTCAAGTTTTGCTATTGGA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATGTGCTTCTGTCAGTCTaGATGTGTTCTGACGAATTA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDVLLSV*MCSDEL
Trigger: TAATTCGTCAGAACACATTCAGACTGACAGAAGCAC...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGTGCTTCTGTCAGTCTaGATGTGTTCTGACGAATTA +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTVLLSV*MCSDEL
Trigger: TAATTCGTCAGAACACATTCAGACTGACAGAAGCAC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGGGCTGTAAATATACATaGAGCTTTGCTCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: LGTPGLRSQPAKLFCLFMGCKYT*SFAHLP
Trigger: AGGCAAGTGAGCAAAGCTTCATGTATATTTACAGCC...CATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGGAGTTTGAGCTTCTGTaGTACTCTAATAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVEFELL*YSNNVA
Trigger: AGCCACGTTATTAGAGTATCACAGAAGCTCAAACTC...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR GCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTTGGTTCCAAGTCTTTaGTATTGTAAACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTLVPSL*YCKQCC
Trigger: GCAGCACTGTTTACAATAGCAAAGACTTGGAACCAA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGATATACATGAAGCTTTaGTCACTTGCCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVIYMKL*SLACHS
Trigger: TGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATAT...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGTTGCAACTCCTCCTTaGGCAACAAAAGGTAATATC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTVATPP*ATKGNI
Trigger: GATATTACCTTTTGTTGCCCAAGGAGGAGTTGCAAC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTTTCCCACAGAATTCTaGAGACACTGGTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTFPTEF*RHWFKT
Trigger: TGTTTTGAACCAGTGTCTCCAGAATTCTGTGGGAAA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTCCTTCAGGCTCTTCTaGGTTTGGAAAAATAGCGTT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDSFRLF*VWKNSV
Trigger: AACGCTATTTTTCCAAACCCAGAAGAGCCTGAAGGA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR CAA 72 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTaGCTGCACCCATCAACCCATCATCTACATCAGGTA +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGT*LHPSTHHLHQV
Trigger: TACCTGATGTAGATGATGGGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTTTCTCCCAGAACTCTaGACCTTCACACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTFLPEL*TFTLHF
Trigger: AAAATGAAGTGTGAAGGTTCAGAGTTCTGGGAGAAA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGTTTCTCCCAGAACTCTaGACCTTCACACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LGTPGLRSQPAKLFCLFMFLPEL*TFTLHF
Trigger: AAAATGAAGTGTGAAGGTTCAGAGTTCTGGGAGAAA...CATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTCCAATAGCAAAACTTaGGGATCTCCTAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTSNSKT*GSPKMA
Trigger: TGCCATTTTAGGAGATCCTCAAGTTTTGCTATTGGA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCATCCTTTTCATCACCTaGCACAATGATAGCACCATT +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTILFIT*HNDSTI
Trigger: AATGGTGCTATCATTGTGTCAGGTGATGAAAAGGAT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATATCCTTTTCATCACCTaGCACAATGATAGCACCATT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDILFIT*HNDSTI
Trigger: AATGGTGCTATCATTGTGTCAGGTGATGAAAAGGAT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGTGGATTGGAGTCATATaGTTTACCAGAATGCTGACT +
Preference number: 4 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVWIGVI*FTRMLT
Trigger: AGTCAGCATTCTGGTAAATCATATGACTCCAATCCA...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR GCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATACCAATGCTGCTCATTaGAATGTATGGAGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDTNAAH*NVWSER
Trigger: TCTTTCACTCCATACATTGCAATGAGCAGCATTGGT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR GCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTCATTAGTTTCTTCCTaGAGTTCATTTCTAGGCATC +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTSLVSS*SSFLGI
Trigger: GATGCCTAGAAATGAACTGCAGGAAGAAACTAATGA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTGTGAAGAATCCAAGTaGGCATTAGAATTCACATCA +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTCEESK*ALEFTS
Trigger: TGATGTGAATTCTAATGCCCACTTGGATTCTTCACA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTTTCCCACAGAATTCTaGAGACACTGGTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDFPTEF*RHWFKT
Trigger: TGTTTTGAACCAGTGTCTCCAGAATTCTGTGGGAAA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGCCTCATCTATAAACTaGGTGCTGAAGAGAATTACT +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTASSIN*VLKRIT
Trigger: AGTAATTCTCTTCAGCACCCAGTTTATAGATGAGGC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGTTTTCCTTGTTTCGTaGAAGGAAGACAAAACTTGT +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTVFLVS*KEDKTC
Trigger: ACAAGTTTTGTCTTCCTTCCACGAAACAAGGAAAAC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTTGTGGGTATTTTGGTTaGTTCCAAGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: CPMIALTDIACCLTVRNTCGYFG*FQVFAI
Trigger: AATAGCAAAGACTTGGAACCAACCAAAATACCCACA...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATAGAACATGCGGTGTTTaGTTTTCTGTTCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDRTCGV*FSVPVL
Trigger: TAACACAGGAACAGAAAACCAAACACCGCATGTTCT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAGAACATGCGGTGTTTaGTTTTCTGTTCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTRTCGV*FSVPVL
Trigger: TAACACAGGAACAGAAAACCAAACACCGCATGTTCT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
3UTR CAA 72 bp GTTCAATTCCCACTTATGAGTGAGAACATGCGGTGTTaGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VQFPLMSENMRC*VFCSCVSLLRM
Trigger: CATCCTCAGCAAACTAACACAGGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAATTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTCTCACTGCGTCTATTaGATAGTTCAAATCCAATTC +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTSHCVY*IVQIQF
Trigger: GAATTGGATTTGAACTATTCAATAGACGCAGTGAGA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR TCA 90 bp ACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGCTGTATCAGCTGTTCCATCACTaGATGATTTGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: TPGLRSQPAKLFCLFMLYQLFHH*MICCDF
Trigger: GAAATCGCAACAAATCATTCAGTGATGGAACAGCTG...ATACAGCATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCCAAGAAAACAAGAGATaGGACATAGCCAATACTACA +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTQENKR*DIANTT
Trigger: TGTAGTATTGGCTATGTCTCATCTCTTGTTTTCTTG...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340001.9
CDS-3UTR GCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATAGTCCATTCCAAAAATaGAGGAAGACGTGTATACAA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDSPFQK*RKTCIQ
Trigger: TTGTATACACGTCTTCCTGCATTTTTGGAATGGACT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTTCTCTCAGGAAAGCTaGAGGAAAAATCTAGAAACA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDFSQES*RKNLET
Trigger: TGTTTCTAGATTTTTCCTCCAGCTTTCCTGAGAGAA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTGTGAAGAATCCAAGTaGGCATTAGAATTCACATCA +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDCEESK*ALEFTS
Trigger: TGATGTGAATTCTAATGCCCACTTGGATTCTTCACA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATCTGCATAGTATTCCATaGTGTATATGTGTCACGTTT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDLHSIP*CICVTF
Trigger: AAACGTGACACATATACACCATGGAATACTATGCAG...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCCAGATCATCAGGCATTaGATACTCATAAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCQIIRH*ILIRSP
Trigger: CGGGCTCCTTATGAGTATCCAATGCCTGATGATCTG...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR GCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCGCTGAATGGTCTCTGTaGTCTTTCATCATGGGGATT +
Preference number: 4 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCAEWSL*SFIMGI
Trigger: AATCCCCATGATGAAAGAGCACAGAGACCATTCAGC...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR GCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTATTGTAAACAGTGCTaGAATAAACATACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTYCKQC*NKHTCA
Trigger: TGCACACGTATGTTTATTGCAGCACTGTTTACAATA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATACAACAGACAAAACATaGACTCACAATCTAAACTCT +
Preference number: 4 (lower is better)
Translates to: IALTDIACCLTVRNTTEDTTDKT*THNLNS
Trigger: AGAGTTTAGATTGTGAGTCCATGTTTTGTCTGTTGT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCACAACAGACAAAACATaGACTCACAATCTAAACTCT +
Preference number: 4 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTTTDKT*THNLNS
Trigger: AGAGTTTAGATTGTGAGTCCATGTTTTGTCTGTTGT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGTGCTGTATAATGGATTaGAGTCATATGATTTACCAG +
Preference number: 4 (lower is better)
Translates to: LGTPGLRSQPAKLFCLFMCCIMD*SHMIYQ
Trigger: CTGGTAAATCATATGACTCCAATCCATTATACAGCA...CATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR TCA 90 bp ACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGCTGTATTCTCACTGCGTCTATTaGATAGTTCAAATCCAATTC +
Preference number: 4 (lower is better)
Translates to: TPGLRSQPAKLFCLFMLYSHCVY*IVQIQF
Trigger: GAATTGGATTTGAACTATTCAATAGACGCAGTGAGA...ATACAGCATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCGTTGCAACTCCTCCTTaGGCAACAAAAGGTAATATC +
Preference number: 4 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCVATPP*ATKGNI
Trigger: GATATTACCTTTTGTTGCCCAAGGAGGAGTTGCAAC...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR CAA 72 bp TTTCTTTATCCGGTCTATCATTTGTGGGTATTTTGGTaGGTTCCAAGTCTTTGCTATTGTAAACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLYPVYHLWVFW*VPSLCYCKQCC
Trigger: GCAGCACTGTTTACAATAGCAAAGACTTGGAACCAACCAAAATACCCACAAATGATAGACCGGATAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCTTCTCTCAGGAAAGCTaGAGGAAAAATCTAGAAACA +
Preference number: 4 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCFSQES*RKNLET
Trigger: TGTTTCTAGATTTTTCCTCCAGCTTTCCTGAGAGAA...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495634.5
3UTR CAA 72 bp GTATATGTGTCACGTTTTCTTTATCCGGTCTATCATTaGTGGGTATTTTGGTTGGTTCCAAGTCTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VYVSRFLYPVYH*WVFWLVPSLCY
Trigger: ATAGCAAAGACTTGGAACCAACCAAAATACCCACAAATGATAGACCGGATAAAGAAAACGTGACACATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CCA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCTTGTTCATTATCTCTTaGGTAGTTTTGGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCLFIIS*VVLDSG
Trigger: ACCTGAATCCAAAACTACCCAAGAGATAATGAACAA...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGAGAAGAGCCCATGTTaGCTGACCCACGCTCATGCG +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALEKSPC*LTHAHA
Trigger: CGCATGAGCGTGGGTCAGCAAACATGGGCTCTTCTC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS GCA 90 bp CCCAGGCTGCAGTCCAGTAGCATGATCCCGGCTCACTACAACCTCTaGTTCCCGGGTTCAAGCAATTCTCCTGCTTGTGATTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: PRLQSSSMIPAHYNL*FPGSSNSPACDFLH
Trigger: ATGGAGGAAATCACAAGCAGGAGAATTGCTTGAACCCGGGAAGCAGAGGTTGTAGTGAGCCGGGATCATGCTACTGGACTGCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461623.1
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGAGAAGAGCCCATGTTaGCTGACCCACGCTCATGCG +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTEKSPC*LTHAHA
Trigger: CGCATGAGCGTGGGTCAGCAAACATGGGCTCTTCTC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTAGGAAGCGAACTTTaGCTATTGCACAGACCTGCT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALLGSEL*LLHRPA
Trigger: AGCAGGTCTGTGCAATAGCAAAAGTTCGCTTCCTAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGTTGACCCTGTCTTATaGATGACCAGTAAATGGGTC +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALVDPVL*MTSKWV
Trigger: GACCCATTTACTGGTCATCAATAAGACAGGGTCAAC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTGTTCCTGTGTTAGTTaGCTGAGGATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALCSCVS*LRMMVS
Trigger: GGAAACCATCATCCTCAGCAAACTAACACAGGAACA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTTTTGAGACAGTTCTaGCAGAGAAGAGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALFLRQF*QRRAHV
Trigger: AACATGGGCTCTTCTCTGCAAGAACTGTCTCAAAAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTCTGCTGGGTAATCAATaGACTCCCCTTACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTLLGNQ*TPLTRK
Trigger: CTTCCGGGTAAGGGGAGTCAATTGATTACCCAGCAG...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGCTGAATGTGCAGGTTaGTTACACAGGTATACATGT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALAECAG*LHRYTC
Trigger: ACATGTATACCTGTGTAACAAACCTGCACATTCAGC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS CCA 90 bp TGCTGCCTCCAGAGCGCCACGCCACTGATTGTTTTCCTTGTTTCGTaGAAGGAAGACAAAACTTGTTCCAGCTCAACAAGGCTTCCTATA +
Preference number: 5 (lower is better)
Translates to: CCLQSATPLIVFLVS*KEDKTCSSSTRLPI
Trigger: TATAGGAAGCCTTGTTGAGCTGGAACAAGTTTTGTCTTCCTTCCACGAAACAAGGAAAACAATCAGTGGCGTGGCGCTCTGGAGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGCTGTATGAGAAGAGCCCATGTTaGCTGACCCACGCTCATGCG +
Preference number: 5 (lower is better)
Translates to: TPGLRSQPAKLFCLFMLYEKSPC*LTHAHA
Trigger: CGCATGAGCGTGGGTCAGCAAACATGGGCTCTTCTC...ATACAGCATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCATTAGCCCTTCCGTGTaGAAACCAAAAACAGGATTT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALISPSV*KPKTGF
Trigger: AAATCCTGTTTTTGGTTTCAACACGGAAGGGCTAAT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCGGCTTCCTATATCTTTaGCCCCATCAGTTTGTAATT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALGFLYL*PHQFVI
Trigger: AATTACAAACTGATGGGGCAAAAGATATAGGAAGCC...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAGCGAACTTTTGCTATaGCACAGACCTGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTSELLL*HRPAAS
Trigger: GGAGGCAGCAGGTCTGTGCAATAGCAAAAGTTCGCT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATAGCGAACTTTTGCTATaGCACAGACCTGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDSELLL*HRPAAS
Trigger: GGAGGCAGCAGGTCTGTGCAATAGCAAAAGTTCGCT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATCTGCTGGGTAATCAATaGACTCCCCTTACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDLLGNQ*TPLTRK
Trigger: CTTCCGGGTAAGGGGAGTCAATTGATTACCCAGCAG...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTTGTGGGTATTTTGGTaGGTTCCAAGTCTTTGCTAT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALLWVFW*VPSLCY
Trigger: ATAGCAAAGACTTGGAACCAACCAAAATACCCACAA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCTATCCGGTCTATCATTaGTGGGTATTTTGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALYPVYH*WVFWLV
Trigger: AACCAACCAAAATACCCACAAATGATAGACCGGATA...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTATGTGCCATGGTACTTaGCTGCACCCATCAACCCAT +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTMCHGT*LHPSTH
Trigger: ATGGGTTGATGGGTGCAGCAAAGTACCATGGCACAT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS GCA 90 bp GTAGTCACCAATGCTGCTCATTGCAATGTATGGAGTGAAAGAGGCTaGCATCGGTATCCAGAAGAAGGTGTTACTTCGGTACCCATACTC +
Preference number: 5 (lower is better)
Translates to: VVTNAAHCNVWSERG*HRYPEEGVTSVPIL
Trigger: GAGTATGGGTACCGAAGTAACACCTTCTTCTGGATACCGATGGCAGCCTCTTTCACTCCATACATTGCAATGAGCAGCATTGGTGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340001.9
ENST00000453985.6
ENST00000492580.1
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACGCTCATGCGTCTCTaGCTCATTTTGACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTTLMRL*LILTCF
Trigger: GAAACAGGTCAAAATGAGCAAGAGACGCATGAGCGT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCCTCTCACTGCGTCTATaGAATAGTTCAAATCCAATT +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALLSLRL*NSSNPI
Trigger: AATTGGATTTGAACTATTCAATAGACGCAGTGAGAG...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GCTGGCACAAAGGCTGCATGGTATGGCTTAGGCTTATGCCCTATGATCGCCCTCAGTCAGGACGACAATTaGTGCAGATTTTACAATAAG +
Preference number: 5 (lower is better)
Translates to: AGTKAAWYGLGLCPMIALSQDDN*CRFYNK
Trigger: CTTATTGTAAAATCTGCACAAATTGTCGTCCTGACT...GAGGGCGATCATAGGGCATAAGCCTAAGCCATACCATGCAGCCTTTGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTCACTTCAGCTTCCCATaGGATATGAACACCTTCCTG +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTHFSFP*DMNTFL
Trigger: CAGGAAGGTGTTCATATCCAATGGGAAGCTGAAGTG...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTCGTCTCTTGCTCATTTaGACCTGTTTCTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTRLLLI*TCFSQE
Trigger: TTCCTGAGAGAAACAGGTCAAAATGAGCAAGAGACG...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATACGCTCATGCGTCTCTaGCTCATTTTGACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDTLMRL*LILTCF
Trigger: GAAACAGGTCAAAATGAGCAAGAGACGCATGAGCGT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATCACTTCAGCTTCCCATaGGATATGAACACCTTCCTG +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDHFSFP*DMNTFL
Trigger: CAGGAAGGTGTTCATATCCAATGGGAAGCTGAAGTG...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATAGAGGAAGTATGTATTaGGAGACAGTTCCCACGGGT +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDRGSMY*ETVPTG
Trigger: ACCCGTGGGAACTGTCTCCAAATACATACTTCCTCT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAGAGGAAGTATGTATTaGGAGACAGTTCCCACGGGT +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTRGSMY*ETVPTG
Trigger: ACCCGTGGGAACTGTCTCCAAATACATACTTCCTCT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAAACATGGGATTTGGTaGCTGGCACAAAGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTKHGIW*LAQRLH
Trigger: ATGCAGCCTTTGTGCCAGCAACCAAATCCCATGTTT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCCGTCTCTTGCTCATTTaGACCTGTTTCTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTRLLLI*TCFSQE
Trigger: TTCCTGAGAGAAACAGGTCAAAATGAGCAAGAGACG...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTATCTCTTGGGTAGTTTaGGATTCAGGTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTISWVV*DSGANA
Trigger: TGCATTTGCACCTGAATCCAAAACTACCCAAGAGAT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTTCCTGTACAACTCGTaGTACCTCTTTCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTFLYNS*YLFLHF
Trigger: GAAGTGGAGAAAGAGGTACAACGAGTTGTACAGGAA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTTAGGAAGCGAACTTTaGCTATTGCACAGACCTGCT +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTLGSEL*LLHRPA
Trigger: AGCAGGTCTGTGCAATAGCAAAAGTTCGCTTCCTAA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCGTTGACCCTGTCTTATaGATGACCAGTAAATGGGTC +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTVDPVL*MTSKWV
Trigger: GACCCATTTACTGGTCATCAATAAGACAGGGTCAAC...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCATTCCAAGTAGTCCATaGCTAATGACATCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTIPSSP*LMTSRR
Trigger: CCTCCTGGATGTCATTAGCAATGGACTACTTGGAAT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGCTGAATGTGCAGGTTaGTTACACAGGTATACATGT +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTAECAG*LHRYTC
Trigger: ACATGTATACCTGTGTAACAAACCTGCACATTCAGC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS CCA 90 bp GCCAGTGATAGTTATAATTATAGGATTTATCTTGCAATAAGGCAGTaGTTCTCAGCCAGGGGAATCCTCCTCCTGTCCTGCAGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: ASDSYNYRIYLAIRQ*FSARGILLLSCSWF
Trigger: AAACCAACTGCAGGACAGGAGGAGGATTCCCCTGGCTGAGAACCACTGCCTTATTGCAAGATAAATCCTATAATTATAACTATCACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482072.1
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTTTTTGAGACAGTTCTaGCAGAGAAGAGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTFLRQF*QRRAHV
Trigger: AACATGGGCTCTTCTCTGCAAGAACTGTCTCAAAAA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp GTAAATATACATGAAGCTTTGCTCACTTGCCTGCCACTCACCTCCTGCTATGTGTTTTTGAGACAGTTCTaGCAGAGAAGAGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: VNIHEALLTCLPLTSCYVFLRQF*QRRAHV
Trigger: AACATGGGCTCTTCTCTGCAAGAACTGTCTCAAAAA...CACATAGCAGGAGGTGAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCATCTCTTGGGTAGTTTaGGATTCAGGTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTISWVV*DSGANA
Trigger: TGCATTTGCACCTGAATCCAAAACTACCCAAGAGAT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGATCTCTTGGGTAGTTTaGGATTCAGGTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: LGTPGLRSQPAKLFCLFMISWVV*DSGANA
Trigger: TGCATTTGCACCTGAATCCAAAACTACCCAAGAGAT...CATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTGGCTTCCTATATCTTTaGCCCCATCAGTTTGTAATT +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTGFLYL*PHQFVI
Trigger: AATTACAAACTGATGGGGCAAAAGATATAGGAAGCC...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS TCA 90 bp GGAAAGCTAAAGTTATCAAAGACAGGCCATAGAGGAGAAAGAGGGTaGAGACCATCACAAAACCAGTCAGGACGACAATTTGTGCAGATT +
Preference number: 5 (lower is better)
Translates to: GKLKLSKTGHRGERG*RPSQNQSGRQFVQI
Trigger: AATCTGCACAAATTGTCGTCCTGACTGGTTTTGTGATGGTCTTCACCCTCTTTCTCCTCTATGGCCTGTCTTTGATAACTTTAGCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340001.9
ENST00000453985.6
ENST00000461623.1
CDS TCA 90 bp CCTTTCTGCCTCTTCCTTAGCACTTACCTAGTATATACGAGGAATTaGCAGACAGACCCCAGAGATGCACAGATGAAGATTTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PFCLFLSTYLVYTRN*QTDPRDAQMKILFL
Trigger: GAGAAACAAAATCTTCATCTGTGCATCTCTGGGGTCTGTCTGTCAATTCCTCGTATATACTAGGTAAGTGCTAAGGAAGAGGCAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461623.1
CDS-3UTR CAA 90 bp ACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGCTGTATCGTCTCTTGCTCATTTaGACCTGTTTCTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: TPGLRSQPAKLFCLFMLYRLLLI*TCFSQE
Trigger: TTCCTGAGAGAAACAGGTCAAAATGAGCAAGAGACG...ATACAGCATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp TGCCCTATGATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTATAATCCTCAATGCCTaGGTTAGAACATCTATCAAG +
Preference number: 5 (lower is better)
Translates to: CPMIALTDIACCLTVRNTIILNA*VRTSIK
Trigger: CTTGATAGATGTTCTAACCAAGGCATTGAGGATTAT...AGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGATCATAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTATCCGGTCTATCATTaGTGGGTATTTTGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTYPVYH*WVFWLV
Trigger: AACCAACCAAAATACCCACAAATGATAGACCGGATA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCTTTGTTCATTATCTCTaGGGTAGTTTTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTFVHYL*GSFGFR
Trigger: CCTGAATCCAAAACTACCCAAGAGATAATGAACAAA...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATTTTGTTCATTATCTCTaGGGTAGTTTTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDFVHYL*GSFGFR
Trigger: CCTGAATCCAAAACTACCCAAGAGATAATGAACAAA...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATCTCTCACTGCGTCTATaGAATAGTTCAAATCCAATT +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDLSLRL*NSSNPI
Trigger: AATTGGATTTGAACTATTCAATAGACGCAGTGAGAG...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGCTCTCACTGCGTCTATaGAATAGTTCAAATCCAATT +
Preference number: 5 (lower is better)
Translates to: LGTPGLRSQPAKLFCLFMLSLRL*NSSNPI
Trigger: AATTGGATTTGAACTATTCAATAGACGCAGTGAGAG...CATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp AGGTTTGTTACACAGGTATACATGTGCCATGGTACTTTGCTGCACCCATCAACCAGTCAGGACGACAATTaGTGCAGATTTTACAATAAG +
Preference number: 5 (lower is better)
Translates to: RFVTQVYMCHGTLLHPSTSQDDN*CRFYNK
Trigger: CTTATTGTAAAATCTGCACAAATTGTCGTCCTGACT...GGTTGATGGGTGCAGCAAAGTACCATGGCACATGTATACCTGTGTAACAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ATCGCCCTCACTGACATCGCCTGTTGTCTCACTGTAAGAAATACTACTGAGGATATAATCCTCAATGCCTaGGTTAGAACATCTATCAAG +
Preference number: 5 (lower is better)
Translates to: IALTDIACCLTVRNTTEDIILNA*VRTSIK
Trigger: CTTGATAGATGTTCTAACCAAGGCATTGAGGATTAT...ATCCTCAGTAGTATTTCTTACAGTGAGACAACAGGCGATGTCAGTGAGGGCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS-3UTR CAA 90 bp ACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTTGTTTATGCTGTATAGTCAACCAGCTAAGTaGTTCTGTTTGTTTATGCTG +
Preference number: 5 (lower is better)
Translates to: TPGLRSQPAKLFCLFMLYSQPAK*FCLFML
Trigger: CAGCATAAACAAACAGAACAACTTAGCTGGTTGACT...ATACAGCATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCAATATACATGAAGCTTaGCTCACTTGCCTGCCACTC +
Preference number: 5 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCNIHEA*LTCLPL
Trigger: GAGTGGCAGGCAAGTGAGCAAAGCTTCATGTATATT...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS-3UTR CAA 90 bp TATACAACTTACCATAATGTAGAATCAGTAGGAACCCTGAGCTTGTTTTCCTGCTTTGTTCATTATCTCTaGGGTAGTTTTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: YTTYHNVESVGTLSLFSCFVHYL*GSFGFR
Trigger: CCTGAATCCAAAACTACCCAAGAGATAATGAACAAA...GCAGGAAAACAAGCTCAGGGTTCCTACTGATTCTACATTATGGTAAGTTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS GCA 72 bp CAGTCCAGTAGCATGATCCCGGCTCACTACAACCTCTaGTTCCCGGGTTCAAGCAATTCTCCTGCTTGTGAT +
Preference number: 6 (lower is better)
Translates to: QSSSMIPAHYNL*FPGSSNSPACD
Trigger: ATCACAAGCAGGAGAATTGCTTGAACCCGGGAAGCAGAGGTTGTAGTGAGCCGGGATCATGCTACTGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461623.1
CDS CCA 72 bp CTGCTCCTGGATATGCAGCCCATGGAGATTCTCACATaGGGTCATGAGGGGACCAGTGCAAGGATGTTCTTT +
Preference number: 6 (lower is better)
Translates to: LLLDMQPMEILT*GHEGTSARMFF
Trigger: AAAGAACATCCTTGCACTGGTCCCCTCATGACCCCATGTGAGAATCTCCATGGGCTGCATATCCAGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585714.1
CDS CCA 72 bp TCCATCAATCAGTTCTGCTCCTGGATATGCAGCCCATaGAGATTCTCACATGGGGTCATGAGGGGACCAGTG +
Preference number: 6 (lower is better)
Translates to: SINQFCSWICSP*RFSHGVMRGPV
Trigger: CACTGGTCCCCTCATGACCCCATGTGAGAATCTCCATGGGCTGCATATCCAGGAGCAGAACTGATTGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585714.1
CDS TCA 72 bp TTGCACAGACCTGCTGCCTCCAGAGCGCCACGCCACTaGTTGTTTTCCTTGTTTCGTGGAAGGAAGACAAAA +
Preference number: 6 (lower is better)
Translates to: LHRPAASRAPRH*LFSLFRGRKTK
Trigger: TTTTGTCTTCCTTCCACGAAACAAGGAAAACAATCAGTGGCGTGGCGCTCTGGAGGCAGCAGGTCTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS TCA 72 bp TTGAGACAGTTCTTGCAGAGAAGAGCCCATGTTTGCTaGCCCACGCTCATGCGTCTCTTGCTCATTTTGACC +
Preference number: 6 (lower is better)
Translates to: LRQFLQRRAHVC*PTLMRLLLILT
Trigger: GGTCAAAATGAGCAAGAGACGCATGAGCGTGGGTCAGCAAACATGGGCTCTTCTCTGCAAGAACTGTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340001.9
ENST00000453985.6
ENST00000495634.5
ENST00000585714.1
CDS GCA 72 bp TTTAGGAAGCGAACTTTTGCTATTGCACAGACCTGCTaGCTCCAGAGCGCCACGCCACTGATTGTTTTCCTT +
Preference number: 6 (lower is better)
Translates to: FRKRTFAIAQTC*LQSATPLIVFL
Trigger: AAGGAAAACAATCAGTGGCGTGGCGCTCTGGAGGCAGCAGGTCTGTGCAATAGCAAAAGTTCGCTTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS GCA 72 bp AACTTTAGGAAGCGAACTTTTGCTATTGCACAGACCTaGTGCCTCCAGAGCGCCACGCCACTGATTGTTTTC +
Preference number: 6 (lower is better)
Translates to: NFRKRTFAIAQT*CLQSATPLIVF
Trigger: GAAAACAATCAGTGGCGTGGCGCTCTGGAGGCAGCAGGTCTGTGCAATAGCAAAAGTTCGCTTCCTAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS CCA 72 bp CAGAGCGCCACGCCACTGATTGTTTTCCTTGTTTCGTaGAAGGAAGACAAAACTTGTTCCAGCTCAACAAGG +
Preference number: 6 (lower is better)
Translates to: QSATPLIVFLVS*KEDKTCSSSTR
Trigger: CCTTGTTGAGCTGGAACAAGTTTTGTCTTCCTTCCACGAAACAAGGAAAACAATCAGTGGCGTGGCGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS TCA 72 bp TGTAGTCACCAATGCTGCTCATTGCAATGTATGGAGTaGAAGAGGCTGCCATCGGTATCCAGAAGAAGGTGT +
Preference number: 6 (lower is better)
Translates to: CSHQCCSLQCME*KRLPSVSRRRC
Trigger: ACACCTTCTTCTGGATACCGATGGCAGCCTCTTTCACTCCATACATTGCAATGAGCAGCATTGGTGACTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340001.9
ENST00000453985.6
ENST00000492580.1
CDS TCA 72 bp GGATATGCAGCCCATGGAGATTCTCACATGGGGTCATaGGGGGACCAGTGCAAGGATGTTCTTTATAATGTA +
Preference number: 6 (lower is better)
Translates to: GYAAHGDSHMGS*GDQCKDVLYNV
Trigger: TACATTATAAAGAACATCCTTGCACTGGTCCCCTCATGACCCCATGTGAGAATCTCCATGGGCTGCATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585714.1
CDS TCA 72 bp TTTGCTGACCCACGCTCATGCGTCTCTTGCTCATTTTaGCCTGTTTCCATCAATCAGTTCTGCTCCTGGATA +
Preference number: 6 (lower is better)
Translates to: FADPRSCVSCSF*PVSINQFCSWI
Trigger: TATCCAGGAGCAGAACTGATTGATGGAAACAGGTCAAAATGAGCAAGAGACGCATGAGCGTGGGTCAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585714.1
CDS TCA 72 bp CTCTTCCTTAGCACTTACCTAGTATATACGAGGAATTaGCAGACAGACCCCAGAGATGCACAGATGAAGATT +
Preference number: 6 (lower is better)
Translates to: LFLSTYLVYTRN*QTDPRDAQMKI
Trigger: AATCTTCATCTGTGCATCTCTGGGGTCTGTCTGTCAATTCCTCGTATATACTAGGTAAGTGCTAAGGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461623.1
CDS TCA 72 bp ATCTATAAACTGGGTGCTGAAGAGAATTACTCTGTCTaGTTTCCCCTCTTTCAGGAGATTCCATATTCGGTG +
Preference number: 6 (lower is better)
Translates to: IYKLGAEENYSV*FPLFQEIPYSV
Trigger: CACCGAATATGGAATCTCCTGAAAGAGGGGAAATCAGACAGAGTAATTCTCTTCAGCACCCAGTTTATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS CAA 72 bp TCCAAAGATTACTATGTAGGATTCAGGAGCACTGGATaGGCACACACCCATCCACATGAAGACATCTTAAAA +
Preference number: 6 (lower is better)
Translates to: SKDYYVGFRSTG*AHTHPHEDILK
Trigger: TTTTAAGATGTCTTCATGTGGATGGGTGTGTGCCAATCCAGTGCTCCTGAATCCTACATAGTAATCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585714.1
CDS CAA 90 bp TTGGGGACCCCTGGTCTAAGGAGTCAACCAGCTAAGTTGTTCTGTTaGTTTATGCTGTATAATGGATTGGAGTCATATGATTTACCAGAA +
Preference number: 6 (lower is better)
Translates to: LGTPGLRSQPAKLFC*FMLYNGLESYDLPE
Trigger: TTCTGGTAAATCATATGACTCCAATCCATTATACAGCATAAACAAACAGAACAACTTAGCTGGTTGACTCCTTAGACCAGGGGTCCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495634.5
CDS CAA 72 bp AAACTTGTTCCAGCTCAACAAGGCTTCCTATATCTTTaGCCCCATCAGTTTGTAATTGTCCCCAAATTCCAA +
Preference number: 6 (lower is better)
Translates to: KLVPAQQGFLYL*PHQFVIVPKFQ
Trigger: TTGGAATTTGGGGACAATTACAAACTGATGGGGCAAAAGATATAGGAAGCCTTGTTGAGCTGGAACAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340001.9
ENST00000453985.6
CDS TCA 72 bp CATGAAAAGAGTAGCTATTATGAGGTATGGATTTTGTaGAGAATCCAAGTGGGCATTAGAATTCACATCATA +
Preference number: 6 (lower is better)
Translates to: HEKSSYYEVWIL*RIQVGIRIHII
Trigger: TATGATGTGAATTCTAATGCCCACTTGGATTCTTCACAAAATCCATACCTCATAATAGCTACTCTTTTCATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340001.9
ENST00000453985.6
ENST00000461623.1