RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000064687

Ensembl transcript IDs: ENST00000263094.11, ENST00000433129.6, ENST00000435683.7, ENST00000524383.1, ENST00000524850.5, ENST00000525073.6, ENST00000525238.2, ENST00000526885.5, ENST00000527496.1, ENST00000529442.7, ENST00000530092.2, ENST00000530703.1, ENST00000531467.5, ENST00000533574.1, ENST00000673773.1

Found 828 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGCGCAGCTCCGCCCCAGGGAACTCGGCCGCCACGAAGGCCGCTaGCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTG +
Preference number: 1 (lower is better)
Translates to: LAQLRPRELGRHEGR*RLGPCGGHPQGQCV
Trigger: CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCGGCCGAGTTCCCTGGGGCGGAGCTGCGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 90 bp CCCAGGGAACTCGGCCGCCACGAAGGCCGCTGCCGGCTGGGACCTTaGGGCGGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCT +
Preference number: 1 (lower is better)
Translates to: PRELGRHEGRCRLGP*GGHPQGQCVTRRES
Trigger: AGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCGGCCGAGTTCCCTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp CAGCAGGCGCCGGGCACCGGGCCGGCTACACTGGCAGGCTGGGGATaGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCAC +
Preference number: 1 (lower is better)
Translates to: QQAPGTGPATLAGWG*RLWGPVATGQDLGH
Trigger: GTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCCGGCGCCTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR CCA 90 bp CCGGGCACCGGGCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTaGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCACTTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: PGTGPATLAGWGWRL*GPVATGQDLGHFSR
Trigger: CCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR GCA 90 bp GCAGTGCTAGGGTCATCGAGGAACTGGCTGACGCGTTTGGGGTGCTaGAGGCCTGGCGCGGGGTCCACTCCCACTCCTGCCTCCTTCTGC +
Preference number: 1 (lower is better)
Translates to: AVLGSSRNWLTRLGC*RPGAGSTPTPASFC
Trigger: GCAGAAGGAGGCAGGAGTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCCTAGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 90 bp TCGGCAGTGCTAGGGTCATCGAGGAACTGGCTGACGCGTTTGGGGTaGTGCAGGCCTGGCGCGGGGTCCACTCCCACTCCTGCCTCCTTC +
Preference number: 1 (lower is better)
Translates to: SAVLGSSRNWLTRLG*CRPGAGSTPTPASF
Trigger: GAAGGAGGCAGGAGTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCCTAGCACTGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp GAGGCTCAGAGCACAGTCTCGGCAGTGCTAGGGTCATCGAGGAACTaGCTGACGCGTTTGGGGTGCTGCAGGCCTGGCGCGGGGTCCACT +
Preference number: 1 (lower is better)
Translates to: EAQSTVSAVLGSSRN*LTRLGCCRPGAGST
Trigger: AGTGGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCCTAGCACTGCCGAGACTGTGCTCTGAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 90 bp TCCAGGTGCTCGCGGCCCGTCAGCAGCTCAAAGATGGCATCGGATTaGGGGCAGTATCCCATGCTGAGGTGCGCAGCACTGGGTTCCCGG +
Preference number: 1 (lower is better)
Translates to: SRCSRPVSSSKMASD*GQYPMLRCAALGSR
Trigger: CCGGGAACCCAGTGCTGCGCACCTCAGCATGGGATACTGCCCTCAATCCGATGCCATCTTTGAGCTGCTGACGGGCCGCGAGCACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 90 bp GCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTGGGGTCCAGTTaGCACTGGCCAAGACCTTGGCCACTTCAGCAGGAACTTCTGGTG +
Preference number: 1 (lower is better)
Translates to: AGYTGRLGMETLGSS*HWPRPWPLQQELLV
Trigger: CACCAGAAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR GCA 90 bp GGCAGAGACCTCACCCTGGGCTGTGGCAGGAGTTGGCTTCGGTGCTaGAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACC +
Preference number: 1 (lower is better)
Translates to: GRDLTLGCGRSWLRC*SSSVKRRKRGPCIT
Trigger: GGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCCCAGGGTGAGGTCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp TTGGTCAAGTTCCTCAGCACCAACACATCCCCCTGGGTGGCTCCTTaGACCACCCGCTCCCGTTCACGGGCTACATCCTCGTCCTCCTCT +
Preference number: 1 (lower is better)
Translates to: LVKFLSTNTSPWVAP*TTRSRSRATSSSSS
Trigger: AGAGGAGGACGAGGATGTAGCCCGTGAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGGGGATGTGTTGGTGCTGAGGAACTTGACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 90 bp CCCTGGGCTGTGGCAGGAGTTGGCTTCGGTGCTGCAGCAGTAGTGTaGAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGT +
Preference number: 1 (lower is better)
Translates to: PWAVAGVGFGAAAVV*REGRGAPVSPWPRG
Trigger: ACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp GGTATACCTTGGTCAAGTTCCTCAGCACCAACACATCCCCCTGGGTaGCTCCTTGGACCACCCGCTCCCGTTCACGGGCTACATCCTCGT +
Preference number: 1 (lower is better)
Translates to: GIPWSSSSAPTHPPG*LLGPPAPVHGLHPR
Trigger: ACGAGGATGTAGCCCGTGAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGGGGATGTGTTGGTGCTGAGGAACTTGACCAAGGTATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp CCCTGGTCCTTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTaGCTCACGGAAAAGTCCTCCACGCCGTGCTCTGCGCCGTGCACC +
Preference number: 1 (lower is better)
Translates to: PWSLEKYKNTSSSIV*LTEKSSTPCSAPCT
Trigger: GGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp GGCACAAAGTCTCCCACAATCCTCAAGACTTTACCCAGGCCATCTTaGACAAGCCCCTGCCTACAAGGGGCCAGACAGGGCAGTGGCAAG +
Preference number: 1 (lower is better)
Translates to: GTKSPTILKTLPRPS*TSPCLQGARQGSGK
Trigger: CTTGCCACTGCCCTGTCTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAGGATTGTGGGAGACTTTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp CTGCCTCCTTCTGCTCTTCGGTGTCCTCGTCCTTCCCCTGGTCCTTaGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGG +
Preference number: 1 (lower is better)
Translates to: LPPSALRCPRPSPGP*RSTRIPPPASSGSR
Trigger: CCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAAGAGCAGAAGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 90 bp AGCCTAAAGAGGTGGGCACTGCCACCCTCAGCCCTGTTCCCACCCTaGCCTCCTTGCTTTTTGAGTAGGAAGGCACAAAGTCTCCCACAA +
Preference number: 1 (lower is better)
Translates to: SLKRWALPPSALFPP*PPCFLSRKAQSLPQ
Trigger: TTGTGGGAGACTTTGTGCCTTCCTACTCAAAAAGCAAGGAGGTCAGGGTGGGAACAGGGCTGAGGGTGGCAGTGCCCACCTCTTTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 90 bp GGTTGGCAGGGGCCACATATGCCCTCTGCTGGAAGGCCAGAAAGATaGGCACCACGATGCATGCTGGCACCAAGTAGTTACACTGCATTG +
Preference number: 1 (lower is better)
Translates to: GWQGPHMPSAGRPER*APRCMLAPSSYTAL
Trigger: CAATGCAGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGCCCCTGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 90 bp ATATGCCCTCTGCTGGAAGGCCAGAAAGATGAGCACCACGATGCATaGTGGCACCAAGTAGTTACACTGCATTGGAGATGGCAGTTACCT +
Preference number: 1 (lower is better)
Translates to: ICPLLEGQKDEHHDA*WHQVVTLHWRWQLP
Trigger: AGGTAACTGCCATCTCCAATGCAGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAGAGGGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 90 bp TGCCCTCTGCTGGAAGGCCAGAAAGATGAGCACCACGATGCATGCTaGCACCAAGTAGTTACACTGCATTGGAGATGGCAGTTACCTTTA +
Preference number: 1 (lower is better)
Translates to: CPLLEGQKDEHHDAC*HQVVTLHWRWQLPL
Trigger: TAAAGGTAACTGCCATCTCCAATGCAGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CAA 90 bp CCCCAGGGAACTCGGCCGCCACGAAGGCCGCTGCCGGCTGGGACCTaGCGGCGGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATC +
Preference number: 2 (lower is better)
Translates to: PQGTRPPRRPLPAGT*RRAPAGSVCDPPRI
Trigger: GATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCGGCCGAGTTCCCTGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp GCCGGTCACTGCCTGGGGCGGAGGGGGACCACCAGCTGCAGCCGGGCAGTCGGGTCCAGTCCTGCCTCCTaGAGCAGCGCCTCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: AGHCLGRRGTTSCSRAVGSSPAS*SSASSS
Trigger: GCTGCTCGAGGCGCTGCTGCAGGAGGCAGGACTGGA...CCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCTCCGCCCCAGGCAGTGACCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp GAAGGCCGCTGCCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTGAGTGTGGTGATGCTGTaGGCGTGGCGGGCCGGGCCT +
Preference number: 2 (lower is better)
Translates to: EGRCRLGPCGGHPQGQCVSVVML*AWRAGP
Trigger: AGGCCCGGCCCGCCACGCCCACAGCATCACCACACT...CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp GCCGGTCACTGCCTGGGGCGGAGGGGGACCACCAGCTGCAGCCGGGCAGTCGGGGGGTCCAGTTGCCACTaGCCAAGACCTTGGCCACTT +
Preference number: 2 (lower is better)
Translates to: AGHCLGRRGTTSCSRAVGGSSCH*PRPWPL
Trigger: AAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCC...CCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCTCCGCCCCAGGCAGTGACCGGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp CGGTCACTGCCTGGGGCGGAGGGGGACCACCAGCTGCAGCCGGGCAGTCGGGCATGGGGATGGAGACTCTaGGGTCCAGTTGCCACTGGC +
Preference number: 2 (lower is better)
Translates to: RSLPGAEGDHQLQPGSRAWGWRL*GPVATG
Trigger: GCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA...TGCCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCTCCGCCCCAGGCAGTGACCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR TCA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCCCATGCTATGGGAGGTaGGCATCACTGAACGGCCCT +
Preference number: 2 (lower is better)
Translates to: CSAPCTASSPKTRARAQRPCYGR*ASLNGP
Trigger: AGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGG...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp GAAGGCCGCTGCCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTGTCTTGGACAAGCCCCTaGCTACAAGGGGCCAGACAG +
Preference number: 2 (lower is better)
Translates to: EGRCRLGPCGGHPQGQCVSWTSP*LQGARQ
Trigger: CTGTCTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGA...CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAACAGCGCAGGGGTGACTaGAACTGCCTGTCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: QLEAQAASMCLAQLRPREQRRGD*NCLSPK
Trigger: CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTG...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp GAAGGCCGCTGCCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTGCAAGCGGTCAACAGCTaGCATCCTCTGCCCACGGTA +
Preference number: 2 (lower is better)
Translates to: EGRCRLGPCGGHPQGQCVQAVNS*HPLPTV
Trigger: TACCGTGGGCAGAGGATGCCAGCTGTTGACCGCTTG...CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp CCGGGCACCGGGCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTGGGGTCCAGGTGCCGAGAACCTGTaGGAGCTATGCTGCACTGGG +
Preference number: 2 (lower is better)
Translates to: PGTGPATLAGWGWRLWGPGAENL*ELCCTG
Trigger: CCCAGTGCAGCATAGCTCCCACAGGTTCTCGGCACC...TGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp TGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCCTGGGGCGGAGGGGGCCGGGCCGGCTACACTaGCAGGCTGGGGATGGAGAC +
Preference number: 2 (lower is better)
Translates to: CQVLNHFPRAGHCLGRRGPGRLH*QAGDGD
Trigger: GTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGG...CCCCCTCCGCCCCAGGCAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR CAA 90 bp ACAGTCTCGGCAGTGCTAGGGTCATCGAGGAACTGGCTGACGCGTTaGGGGTGCTGCAGGCCTGGCGCGGGGTCCACTCCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: TVSAVLGSSRNWLTR*GCCRPGAGSTPTPA
Trigger: GGCAGGAGTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCCTAGCACTGCCGAGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR TCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAACGTTGCTGGCTCGGTTaGCAAAGGCCACCATGGAGT +
Preference number: 2 (lower is better)
Translates to: QLEAQAASMCLAQLRPRERCWLG*QRPPWS
Trigger: ACTCCATGGTGGCCTTTGTCAACCGAGCCAGCAACG...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp CTGACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGGAGCCGGTCACTGCCTaGGGCGGAGGGGGACCACCA +
Preference number: 2 (lower is better)
Translates to: LTSFTHFLVFRPWRTRRGEPVTA*GGGGPP
Trigger: TGGTGGTCCCCCTCCGCCCCAGGCAGTGACCGGCTC...CCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCGGAGCTATGCTGCACTaGGGGCTCCTCCAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: LAHQARVGLDQEVRQVPAGAMLH*GLLQSC
Trigger: GCAGGACTGGAGGAGCCCCCAGTGCAGCATAGCTCC...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR TCA 90 bp GGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCTGCCCTTGAGATGTTGCGGCCTGTCAGGTTCTaGACCACTTCCCCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: GHPQGQCVTRRESALEMLRPVRF*TTSPEP
Trigger: CGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCG...CAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp CTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGGGCTCCTCCAGTCCTaGCTCCTGCAGCAGCGCCTC +
Preference number: 2 (lower is better)
Translates to: LLSLQALAHQARVGLDQEGLLQS*LLQQRL
Trigger: GAGGCGCTGCTGCAGGAGGCAGGACTGGAGGAGCCC...TTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR GCA 90 bp TGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCCTGGGGCGGAGGGGGAACCTGTGGGAGCTATaGTGCACTGGGGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: CQVLNHFPRAGHCLGRRGNLWEL*CTGGSS
Trigger: GGAGGAGCCCCCAGTGCAGCATAGCTCCCACAGGTT...CCCCCTCCGCCCCAGGCAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR GCA 90 bp GGGCACCGGGCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTGGGGTCCAGTAGCAGGAACTTCTGGTaGCGAGAACCTGTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: GHRAGYTGRLGMETLGSSSRNFW*REPVGA
Trigger: AGCTCCCACAGGTTCTCGGCACCAGAAGTTCCTGCT...ACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp GAAGGCCGCTGCCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTGGAAGAAGAAGGAGGCTaGGTACATGAGCGGTGTGAT +
Preference number: 2 (lower is better)
Translates to: EGRCRLGPCGGHPQGQCVEEEGG*VHERCD
Trigger: ATCACACCGCTCATGTACCCAGCCTCCTTCTTCTTC...CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CAA 90 bp CTCCAGGTGCTCGCGGCCCGTCAGCAGCTCAAAGATGGCATCGGATaGAGGGCAGTATCCCATGCTGAGGTGCGCAGCACTGGGTTCCCG +
Preference number: 2 (lower is better)
Translates to: LQVLAARQQLKDGIG*RAVSHAEVRSTGFP
Trigger: CGGGAACCCAGTGCTGCGCACCTCAGCATGGGATACTGCCCTCAATCCGATGCCATCTTTGAGCTGCTGACGGGCCGCGAGCACCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR TCA 90 bp GGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCCTGGGGGCGCGGGTAGGTCTTaGCCAGGAAGTCAGACAGGT +
Preference number: 2 (lower is better)
Translates to: GSGLSGSEPLPQSRSLPGGAGRS*PGSQTG
Trigger: ACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCC...CCCAGGCAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp CCTCCCGCACCACGGCCAAAAGGCTGTTCCAAAGGAAGCGCCGCGCGCTGGGGTGCCCCTGTATCACCATaGCCAAGAGGTTCTTGCCGA +
Preference number: 2 (lower is better)
Translates to: PPAPRPKGCSKGSAARWGAPVSP*PRGSCR
Trigger: TCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC...ACCCCAGCGCGCGGCGCTTCCTTTGGAACAGCCTTTTGGCCGTGGTGCGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp GGGCACCGGGCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTGGGGTCCAGTTTCAGCAGGAACTTCTaGTGCCGAGAACCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: GHRAGYTGRLGMETLGSSFSRNF*CREPVG
Trigger: TCCCACAGGTTCTCGGCACCAGAAGTTCCTGCTGAA...ACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp GGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCCTGGGGCTACACTGGCAGGCTaGGGATGGAGACTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: GSGLSGSEPLPQSRSLPGATLAG*GWRLWG
Trigger: ACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGC...CCCAGGCAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR CAA 90 bp GGCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTGGGGTCCAGTaGCCACTGGCCAAGACCTTGGCCACTTCAGCAGGAACTTCTGGT +
Preference number: 2 (lower is better)
Translates to: GRLHWQAGDGDSGVQ*PLAKTLATSAGTSG
Trigger: ACCAGAAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR TCA 90 bp TTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGGGCGCGGGTAGGTCTTaGCCAGGAAGTCAGACAGGT +
Preference number: 2 (lower is better)
Translates to: FLPTTSQRRGDWNCLSPKGAGRS*PGSQTG
Trigger: ACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCC...CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR TCA 90 bp GACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTACCACAACTCCTCCACTaGGCGGCCCAACTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: DLIHPLLSLQALAHQARVPQLLH*AAQLLA
Trigger: GGCCAAGAGTTGGGCCGCTCAGTGGAGGAGTTGTGG...TACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp GCTTCACACTCCTCCATGCTATGGGAGGTGAGCATCACTGAACGGCCCTCCCGCTCCGCTGTAGGTGCCTaGAGGCCGGTCTGCGTACCA +
Preference number: 2 (lower is better)
Translates to: ASHSSMLWEVSITERPSRSAVGA*RPVCVP
Trigger: TGGTACGCAGACCGGCCTGCAGGCACCTACAGCGGA...GCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTGTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CAA 90 bp ACGTCCACCGAGGAGGCCATCAGTGCACCCTCAGACAGCTGCTCCTaGGTGAGGTTCAAGGGGTGGTTGAGTGTGGTGATGCTGTGGGCG +
Preference number: 2 (lower is better)
Translates to: TSTEEAISAPSDSCS*VRFKGWLSVVMLWA
Trigger: CGCCCACAGCATCACCACACTCAACCACCCCTTGAACCTCACCAAGGAGCAGCTGTCTGAGGGTGCACTGATGGCCTCCTCGGTGGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CAA 90 bp GCTGGGGATGGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTaGGCCACTTCAGCAGGAACTTCTGGTGCCGAGAACCTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: AGDGDSGVQLPLAKT*ATSAGTSGAENLWE
Trigger: CTCCCACAGGTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR GCA 90 bp CAGACAGGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCTGTGGGAGCTATGCTaGACTGGGGGCTCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: QTGSGLSGSEPLPQSRSLLWELC*TGGSSS
Trigger: ACTGGAGGAGCCCCCAGTGCAGCATAGCTCCCACAG...CAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACCTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp AGCGGTCAACAGCTGGCATCCTCTGCCCACGGTATACCTTGGTCAAGTTCCTCAGTGGCAAGCAGTGGCTaGGCCCCCACCCGTCCAAGC +
Preference number: 2 (lower is better)
Translates to: SGQQLASSAHGIPWSSSSVASSG*APTRPS
Trigger: GCTTGGACGGGTGGGGGCCCAGCCACTGCTTGCCAC...TGAGGAACTTGACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGTTGACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCCACTGGCCAAGACCTTaGCCACTTCAGCAGGAACTT +
Preference number: 2 (lower is better)
Translates to: LAHQARVGLDQEVRQVPAHWPRP*PLQQEL
Trigger: AAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTG...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR TCA 90 bp CCTTGGCCACTTCAGCAGGAACTTCTGGTGCCGAGAACCTGTGGGAGCTATGCTCGGCCTGTCAGGTTCTaGACCACTTCCCCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: PWPLQQELLVPRTCGSYARPVRF*TTSPEP
Trigger: CGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCG...AGCATAGCTCCCACAGGTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR TCA 90 bp AAAAGTCCTCCACGCCGTGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCAAGATGGCATCGGATTaGGGGCAGTATCCCATGCTG +
Preference number: 2 (lower is better)
Translates to: KSPPRRALRRAPPALQRRKMASD*GQYPML
Trigger: CAGCATGGGATACTGCCCTCAATCCGATGCCATCTT...GCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR TCA 90 bp TTCGGTGTCCTCGTCCTTCCCCTGGTCCTTGGAGAAGTACAAGAATACCTCCTCCGCAGGGTCAGTGTGTaGCCCGCCGCGAATCTGCCC +
Preference number: 2 (lower is better)
Translates to: FGVLVLPLVLGEVQEYLLRRVSV*PAANLP
Trigger: GGGCAGATTCGCGGCGGGTCACACACTGACCCTGCG...GAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp TGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCGCCACATATGCCCTCTaGTGGAAGGCCAGAAAGATG +
Preference number: 2 (lower is better)
Translates to: WPRGSCRPPPSAGVTGTAATYAL*WKARKM
Trigger: CATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGC...GGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp GACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAACTCTGGGGTCCAGTTaGCACTGGCCAAGACCTTGG +
Preference number: 2 (lower is better)
Translates to: DLIHPLLSLQALAHQARVTLGSS*HWPRPW
Trigger: CCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGT...TACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CCA 90 bp AAAAGTCCTCCACGCCGTGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCTTACCCAGGCCATCTTaGACAAGCCCCTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: KSPPRRALRRAPPALQRRLPRPS*TSPCLQ
Trigger: TTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAA...GCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp GGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCTGCCCTTGAGATGTTGGCCCACGGTATACCTTaGTCAAGTTCCTCAGCACCA +
Preference number: 2 (lower is better)
Translates to: GHPQGQCVTRRESALEMLAHGIP*SSSSAP
Trigger: TGGTGCTGAGGAACTTGACCAAGGTATACCGTGGGC...CAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCCCTCCCGGCGGCAGCTaGAAGCGCAGGCGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSPPGGS*KRRRPP
Trigger: TGGAGGCCGCCTGCGCTTCCAGCTGCCGCCGGGAGG...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp GCTTCACACTCCTCCATGCTATGGGAGGTGAGCATCACTGAACGGCCCTCCCGCCAAAGACCACACAGATaGAGACGAGGACGTCCACCG +
Preference number: 2 (lower is better)
Translates to: ASHSSMLWEVSITERPSRQRPHR*RRGRPP
Trigger: CGGTGGACGTCCTCGTCTCCATCTGTGTGGTCTTTG...GCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTGTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CAA 90 bp AGGCACAAAGTCTCCCACAATCCTCAAGACTTTACCCAGGCCATCTaGGACAAGCCCCTGCCTACAAGGGGCCAGACAGGGCAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: RHKVSHNPQDFTQAI*DKPLPTRGQTGQWQ
Trigger: TTGCCACTGCCCTGTCTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAGGATTGTGGGAGACTTTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp CCCCCGTCACCATGCGAAACGTGGACGTCTTCCCTGCTCCATTCACACCCAGCAGAGCACCACGATGCATaGTGGCACCAAGTAGTTACA +
Preference number: 2 (lower is better)
Translates to: PPSPCETWTSSLLHSHPAEHHDA*WHQVVT
Trigger: TGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTC...TGCTGGGTGTGAATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGACGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR GCA 90 bp TTCGGTGTCCTCGTCCTTCCCCTGGTCCTTGGAGAAGTACAAGAATACCTCCTCAGGGGTGACTGGAACTaGCTGTCTCCCAAGCGCTCA +
Preference number: 2 (lower is better)
Translates to: FGVLVLPLVLGEVQEYLLRGDWN*LSPKRS
Trigger: TGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCT...GAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CCA 90 bp CCCCCGTCACCATGCGAAACGTGGACGTCTTCCCTGCTCCATTCACACCCAGCAGTAGTTACACTGCATTaGAGATGGCAGTTACCTTTA +
Preference number: 2 (lower is better)
Translates to: PPSPCETWTSSLLHSHPAVVTLH*RWQLPL
Trigger: TAAAGGTAACTGCCATCTCCAATGCAGTGTAACTAC...TGCTGGGTGTGAATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGACGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp CTCGGCCGCCACGAAGGCCGCTGCCGGCTGGGACCTTaGGGCGGGCACCCGCAGGGTCAGTGTGTGACCCGC +
Preference number: 3 (lower is better)
Translates to: LGRHEGRCRLGP*GGHPQGQCVTR
Trigger: GCGGGTCACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCGGCCGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp CCAGGGAACTCGGCCGCCACGAAGGCCGCTGCCGGCTaGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTG +
Preference number: 3 (lower is better)
Translates to: PGNSAATKAAAG*DLAAGTRRVSV
Trigger: CACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCGGCCGAGTTCCCTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp TCGGGCAGCAGGCGCCGGGCACCGGGCCGGCTACACTaGCAGGCTGGGGATGGAGACTCTGGGGTCCAGTTG +
Preference number: 3 (lower is better)
Translates to: SGSRRRAPGRLH*QAGDGDSGVQL
Trigger: CAACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCCGGCGCCTGCTGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR TCA 72 bp AGGCAGGGGACTCAGCAGCGCCCACAACTCCTCCACTaGGCGGCCCAACTCTTGGCCCGAGGGCAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: RQGTQQRPQLLH*AAQLLARGQAW
Trigger: CCAGGCCTGCCCTCGGGCCAAGAGTTGGGCCGCTCAGTGGAGGAGTTGTGGGCGCTGCTGAGTCCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp TCCGGGACACCGCGCAGGCGCGCAAGCAGCTCCAGGTaGTCGCGGCCCGTCAGCAGCTCAAAGATGGCATCG +
Preference number: 3 (lower is better)
Translates to: SGTPRRRASSSR*SRPVSSSKMAS
Trigger: CGATGCCATCTTTGAGCTGCTGACGGGCCGCGAGCACCTGGAGCTGCTTGCGCGCCTGCGCGGTGTCCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp CTCACGGAAAAGTCCTCCACGCCGTGCTCTGCGCCGTaGACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCG +
Preference number: 3 (lower is better)
Translates to: LTEKSSTPCSAP*TASSPKTRARA
Trigger: CGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTTCCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp GGGTCATCGAGGAACTGGCTGACGCGTTTGGGGTGCTaGAGGCCTGGCGCGGGGTCCACTCCCACTCCTGCC +
Preference number: 3 (lower is better)
Translates to: GSSRNWLTRLGC*RPGAGSTPTPA
Trigger: GGCAGGAGTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp CCGGGCACCGGGCCGGCTACACTGGCAGGCTGGGGATaGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGAC +
Preference number: 3 (lower is better)
Translates to: PGTGPATLAGWG*RLWGPVATGQD
Trigger: GTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR TCA 72 bp TGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTaGCCCGCCGCGAATCTGCCCTTGAGATGTTGCGGG +
Preference number: 3 (lower is better)
Translates to: WDLAAGTRRVSV*PAANLPLRCCG
Trigger: CCCGCAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp GCGGGCCGGGCCTGGGGGCAGGTGAGCACGGAGGATTaGGTTGCTGGCTCGGTTGACAAAGGCCACCATGGA +
Preference number: 3 (lower is better)
Translates to: AGRAWGQVSTED*VAGSVDKGHHG
Trigger: TCCATGGTGGCCTTTGTCAACCGAGCCAGCAACGCAATCCTCCGTGCTCACCTGCCCCCAGGCCCGGCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp GTGCTGCAGGCCTGGCGCGGGGTCCACTCCCACTCCTaGCTCCTTCTGCTCTTCGGTGTCCTCGTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: VLQAWRGVHSHS*LLLLFGVLVLP
Trigger: GGGAAGGACGAGGACACCGAAGAGCAGAAGGAGGCAGGAGTGGGAGTGGACCCCGCGCCAGGCCTGCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp CATGCCTGTGGTCGGCTCGTCCAGAAACACCACGGCTaGGTCCCCAACCAGCGCCAGGGCCGTCGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: HACGRLVQKHHG*VPNQRQGRRQL
Trigger: AAGCTGGCGACGGCCCTGGCGCTGGTTGGGGACCCAGCCGTGGTGTTTCTGGACGAGCCGACCACAGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp CTAGGGTCATCGAGGAACTGGCTGACGCGTTTGGGGTaGTGCAGGCCTGGCGCGGGGTCCACTCCCACTCCT +
Preference number: 3 (lower is better)
Translates to: LGSSRNWLTRLG*CRPGAGSTPTP
Trigger: AGGAGTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp GGGCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTaGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCAC +
Preference number: 3 (lower is better)
Translates to: GPATLAGWGWRL*GPVATGQDLGH
Trigger: GTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR-3UTR CAA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAATTTACCCAGGCCATCTaGGACAAGCCCCTGCCTACA +
Preference number: 3 (lower is better)
Translates to: QLEAQAASMCLAQLRPREFTQAI*DKPLPT
Trigger: TGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAA...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp AGCACAGTCTCGGCAGTGCTAGGGTCATCGAGGAACTaGCTGACGCGTTTGGGGTGCTGCAGGCCTGGCGCG +
Preference number: 3 (lower is better)
Translates to: STVSAVLGSSRN*LTRLGCCRPGA
Trigger: CGCGCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCCTAGCACTGCCGAGACTGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp TTCCTCAGCACCAACACATCCCCCTGGGTGGCTCCTTaGACCACCCGCTCCCGTTCACGGGCTACATCCTCG +
Preference number: 3 (lower is better)
Translates to: FLSTNTSPWVAP*TTRSRSRATSS
Trigger: CGAGGATGTAGCCCGTGAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGGGGATGTGTTGGTGCTGAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CAA 90 bp CTCACGGAAAAGTCCTCCACGCCGTGCTCTGCGCCGTGCACCGCCAGCTCTCCAGCACGGAGGATTGCGTaGCTGGCTCGGTTGACAAAG +
Preference number: 3 (lower is better)
Translates to: LTEKSSTPCSAPCTASSPARRIA*LARLTK
Trigger: CTTTGTCAACCGAGCCAGCAACGCAATCCTCCGTGC...TGGAGAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTTCCGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CAA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAAGAGTGCCAGCCTTTGTaGTTGAACCAGATCTTGAGA +
Preference number: 3 (lower is better)
Translates to: QLEAQAASMCLAQLRPREECQPL*LNQILR
Trigger: TCTCAAGATCTGGTTCAACAACAAAGGCTGGCACTC...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CAA 90 bp GGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCCTGGGCCACTGGCCAAGACCTaGGCCACTTCAGCAGGAACT +
Preference number: 3 (lower is better)
Translates to: GSGLSGSEPLPQSRSLPGPLAKT*ATSAGT
Trigger: AGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGG...CCCAGGCAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR GCA 72 bp CCTCGCCCCTGCTGGCCAATGTGTCCCCCGTCACCATaGGAAACGTGGACGTCTTCCCTGCTCCATTCACAC +
Preference number: 3 (lower is better)
Translates to: PRPCWPMCPPSP*ETWTSSLLHSH
Trigger: GTGTGAATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGACGGGGGACACATTGGCCAGCAGGGGCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp AGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTaGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCA +
Preference number: 3 (lower is better)
Translates to: RFLPTTSQRRGD*NCLSPKRSKAS
Trigger: TGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
3UTR-3UTR CAA 90 bp AGCGGTCAACAGCTGGCATCCTCTGCCCACGGTATACCTTGGTCAAGTTCCTCAGGGCTGTGGCAGGAGTaGGCTTCGGTGCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: SGQQLASSAHGIPWSSSSGLWQE*ASVLQQ
Trigger: CTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCCC...TGAGGAACTTGACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGTTGACCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp TCCACCGAGGAGGCCATCAGTGCACCCTCAGACAGCTaGTCCTTGGTGAGGTTCAAGGGGTGGTTGAGTGTG +
Preference number: 3 (lower is better)
Translates to: STEEAISAPSDS*SLVRFKGWLSV
Trigger: CACACTCAACCACCCCTTGAACCTCACCAAGGAGCAGCTGTCTGAGGGTGCACTGATGGCCTCCTCGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp CTCAAGACTTTACCCAGGCCATCTTGGACAAGCCCCTaGCTACAAGGGGCCAGACAGGGCAGTGGCAAGCAG +
Preference number: 3 (lower is better)
Translates to: LKTLPRPSWTSP*LQGARQGSGKQ
Trigger: CTGCTTGCCACTGCCCTGTCTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp AGTGGCAGAGACCTCACCCTGGGCTGTGGCAGGAGTTaGCTTCGGTGCTGCAGCAGTAGTGTGAAGAGAAGG +
Preference number: 3 (lower is better)
Translates to: SGRDLTLGCGRS*LRCCSSSVKRR
Trigger: CCTTCTCTTCACACTACTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCCCAGGGTGAGGTCTCTGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CAA 90 bp AGCGGTCAACAGCTGGCATCCTCTGCCCACGGTATACCTTGGTCAAGTTCCTCAATGAGCTGCAGGTGCTaGGCTCGGGTGACTCGCTCC +
Preference number: 3 (lower is better)
Translates to: SGQQLASSAHGIPWSSSSMSCRC*ARVTRS
Trigger: GGAGCGAGTCACCCGAGCCAAGCACCTGCAGCTCAT...TGAGGAACTTGACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGTTGACCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CAA 90 bp TTCGGTGTCCTCGTCCTTCCCCTGGTCCTTGGAGAAGTACAAGAATACCTCCTCTCTGCCCTTGAGATGTaGCGGGCTGCCCAGGCAGCG +
Preference number: 3 (lower is better)
Translates to: FGVLVLPLVLGEVQEYLLSALEM*RAAQAA
Trigger: CGCTGCCTGGGCAGCCCGCAACATCTCAAGGGCAGA...GAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CAA 90 bp GGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCTGCCCTTGAGATGTTGTGCCAGCCTTTGTTGTaGAACCAGATCTTGAGACTG +
Preference number: 3 (lower is better)
Translates to: GHPQGQCVTRRESALEMLCQPLL*NQILRL
Trigger: CAGTCTCAAGATCTGGTTCAACAACAAAGGCTGGCA...CAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR-3UTR CAA 90 bp TTCGGTGTCCTCGTCCTTCCCCTGGTCCTTGGAGAAGTACAAGAATACCTCCTCATGGCCAAGAGGTTCTaGCCGACCACCTCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: FGVLVLPLVLGEVQEYLLMAKRF*PTTSQR
Trigger: GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCAT...GAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 72 bp GCAGGTGAGCACGGAGGATTGCGTTGCTGGCTCGGTTaGCAAAGGCCACCATGGAGTGCCAGCCTTTGTTGT +
Preference number: 3 (lower is better)
Translates to: AGEHGGLRCWLG*QRPPWSASLCC
Trigger: ACAACAAAGGCTGGCACTCCATGGTGGCCTTTGTCAACCGAGCCAGCAACGCAATCCTCCGTGCTCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 72 bp GTGGCAGGAGTTGGCTTCGGTGCTGCAGCAGTAGTGTaGAGAGAAGGAAGAGGGGCCCCTGTATCACCATGG +
Preference number: 3 (lower is better)
Translates to: VAGVGFGAAAVV*REGRGAPVSPW
Trigger: CCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCGAAGCCAACTCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 72 bp TTCACACTCCTCCATGCTATGGGAGGTGAGCATCACTaGACGGCCCTCCCGCACCACGGCCAAAAGGCTGTT +
Preference number: 3 (lower is better)
Translates to: FTLLHAMGGEHH*TALPHHGQKAV
Trigger: AACAGCCTTTTGGCCGTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp AGAGCAGGCAGGTTGGCAGGGGCCACATATGCCCTCTaGTGGAAGGCCAGAAAGATGAGCACCACGATGCAT +
Preference number: 3 (lower is better)
Translates to: RAGRLAGATYAL*WKARKMSTTMH
Trigger: ATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGCCCCTGCCAACCTGCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp ACCAGGGGGAATCCCCAGGCACAAGCGGTCAACAGCTaGCATCCTCTGCCCACGGTATACCTTGGTCAAGTT +
Preference number: 3 (lower is better)
Translates to: TRGNPQAQAVNS*HPLPTVYLGQV
Trigger: AACTTGACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGTTGACCGCTTGTGCCTGGGGATTCCCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp CGCACCATGTCAATGAGCCCCCGGCCCAAGCAGAAGTaGGGGAAGATAAGGAAGACCTGTTTCAAGATCCGG +
Preference number: 3 (lower is better)
Translates to: RTMSMSPRPKQK*GKIRKTCFKIR
Trigger: CCGGATCTTGAAACAGGTCTTCCTTATCTTCCCCCACTTCTGCTTGGGCCGGGGGCTCATTGACATGGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
3UTR CCA 72 bp GCCTCCTTCTGCTCTTCGGTGTCCTCGTCCTTCCCCTaGTCCTTGGAGAAGTACAAGAATACCTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: ASFCSSVSSSFP*SLEKYKNTSSS
Trigger: GCTGGAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAAGAGCAGAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 72 bp GGGCCACATATGCCCTCTGCTGGAAGGCCAGAAAGATaGGCACCACGATGCATGCTGGCACCAAGTAGTTAC +
Preference number: 3 (lower is better)
Translates to: GPHMPSAGRPER*APRCMLAPSSY
Trigger: GTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTaGCTCACGGAAAAGTCCTCCACGCCGTGCTCTGCG +
Preference number: 3 (lower is better)
Translates to: LEKYKNTSSSIV*LTEKSSTPCSA
Trigger: CGCAGAGCACGGCGTGGAGGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp GCGTTGCTGGCTCGGTTGACAAAGGCCACCATGGAGTaGCAGCCTTTGTTGTTGAACCAGATCTTGAGACTG +
Preference number: 3 (lower is better)
Translates to: ALLARLTKATME*QPLLLNQILRL
Trigger: CAGTCTCAAGATCTGGTTCAACAACAAAGGCTGGCACTCCATGGTGGCCTTTGTCAACCGAGCCAGCAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp TCTGCTCTTCGGTGTCCTCGTCCTTCCCCTGGTCCTTaGAGAAGTACAAGAATACCTCCTCCAGCATCGTCT +
Preference number: 3 (lower is better)
Translates to: SALRCPRPSPGP*RSTRIPPPASS
Trigger: AGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAAGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR TCA 72 bp CCTCAGCCCTGTTCCCACCCTGACCTCCTTGCTTTTTaGGTAGGAAGGCACAAAGTCTCCCACAATCCTCAA +
Preference number: 3 (lower is better)
Translates to: PQPCSHPDLLAF*VGRHKVSHNPQ
Trigger: TTGAGGATTGTGGGAGACTTTGTGCCTTCCTACTCAAAAAGCAAGGAGGTCAGGGTGGGAACAGGGCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR GCA 72 bp CTGCTGGAAGGCCAGAAAGATGAGCACCACGATGCATaGTGGCACCAAGTAGTTACACTGCATTGGAGATGG +
Preference number: 3 (lower is better)
Translates to: LLEGQKDEHHDA*WHQVVTLHWRW
Trigger: CCATCTCCAATGCAGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CCA 72 bp CTGGAAGGCCAGAAAGATGAGCACCACGATGCATGCTaGCACCAAGTAGTTACACTGCATTGGAGATGGCAG +
Preference number: 3 (lower is better)
Translates to: LEGQKDEHHDAC*HQVVTLHWRWQ
Trigger: CTGCCATCTCCAATGCAGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CAA 72 bp ACTCGGCCGCCACGAAGGCCGCTGCCGGCTGGGACCTaGCGGCGGGCACCCGCAGGGTCAGTGTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: TRPPRRPLPAGT*RRAPAGSVCDP
Trigger: CGGGTCACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCGGCCGAGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCCCTCCCGGCGGCAGCTaGAAGCGCAGGCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CSAPCTASSPKTRARAQRPPGGS*KRRRPP
Trigger: TGGAGGCCGCCTGCGCTTCCAGCTGCCGCCGGGAGG...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp GAAGGCCGCTGCCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTGGCACAGCCTCGCCCCTaGTGGCCAATGTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: EGRCRLGPCGGHPQGQCVAQPRP*WPMCPP
Trigger: CGGGGGACACATTGGCCAGCAGGGGCGAGGCTGTGC...CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCGCAAGCAGCTCCAGGTaGTCGCGGCCCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSAPCTASSPKTRARAQRASSSR*SRPVSS
Trigger: GCTGCTGACGGGCCGCGAGCACCTGGAGCTGCTTGC...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp AGGGCAGTGGCAAGCAGTGGCTGGGCCCCCACCCGTCCAAGCAGCCCCCGCACCGGCCAGACAGGGCAGTaGCAAGCAGTGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RAVASSGWAPTRPSSPRTGQTGQ*QAVAGP
Trigger: GGGCCCAGCCACTGCTTGCCACTGCCCTGTCTGGCC...GGTGCGGGGGCTGCTTGGACGGGTGGGGGCCCAGCCACTGCTTGCCACTGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AGGGCAGTGGCAAGCAGTGGCTGGGCCCCCACCCGTCCAAGCAGCCCCCGCACCTCCAGTCCTGCCTCCTaGAGCAGCGCCTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RAVASSGWAPTRPSSPRTSSPAS*SSASSS
Trigger: GCTGCTCGAGGCGCTGCTGCAGGAGGCAGGACTGGA...GGTGCGGGGGCTGCTTGGACGGGTGGGGGCCCAGCCACTGCTTGCCACTGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CGGTCACTGCCTGGGGCGGAGGGGGACCACCAGCTGCAGCCGGGCAGTCGGGCAGGAGCTATGCTGCACTaGGGGCTCCTCCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RSLPGAEGDHQLQPGSRAGAMLH*GLLQSC
Trigger: GCAGGACTGGAGGAGCCCCCAGTGCAGCATAGCTCC...TGCCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCTCCGCCCCAGGCAGTGACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR CCA 90 bp GCCGGTCACTGCCTGGGGCGGAGGGGGACCACCAGCTGCAGCCGGGCAGTCGGGGCTACACTGGCAGGCTaGGGATGGAGACTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGHCLGRRGTTSCSRAVGATLAG*GWRLWG
Trigger: ACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGC...CCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCTCCGCCCCAGGCAGTGACCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530092.2
3UTR CAA 72 bp CCTGAGTCCAGGGCTCCTAGGCACTCTACCTTGCCCTaGCCATTCCCAGGGCCTCCCCGCGGCCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PESRAPRHSTLP*PFPGPPRGPAG
Trigger: CCCTGCGGGGCCGCGGGGAGGCCCTGGGAATGGCAAGGGCAAGGTAGAGTGCCTAGGAGCCCTGGACTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAAGGGCTGTGGGAGCTATaGTGCACTGGGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QLEAQAASMCLAQLRPREGLWEL*CTGGSS
Trigger: GGAGGAGCCCCCAGTGCAGCATAGCTCCCACAGCCC...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CGGTCACTGCCTGGGGCGGAGGGGGACCACCAGCTGCAGCCGGGCAGTCGGGCAGGTGCCGAGAACCTGTaGGAGCTATGCTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: RSLPGAEGDHQLQPGSRAGAENL*ELCCTG
Trigger: CCCAGTGCAGCATAGCTCCCACAGGTTCTCGGCACC...TGCCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCTCCGCCCCAGGCAGTGACCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGAGCACCGCGCGGCTaGGCCCCATGGCGCGCATGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRAPRG*APWRAW
Trigger: CCATGCGCGCCATGGGGCTCAGCCGCGCGGTGCTCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCGGGTGCCCACGTTGTaGCACTGCGCGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRVPTL*HCAPSP
Trigger: GGGCGAGGGCGCGCAGTGGCACAACGTGGGCACCCG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAAACCAGCCCCACATCCTaGAGCAGACGGTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: QLEAQAASMCLAQLRPRETSPTS*SRRSCS
Trigger: CGAGCAGGACCGTCTGCTGCAGGATGTGGGGCTGGT...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTGCCGGCTGGGACCTTaGGGCGGGCACCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHCRLGP*GGHPQG
Trigger: ACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp GAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCGCCACGAAGGCCGCTaGCGGCTGGGACCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: EGPLYHHGQEVLADHLPARHEGR*RLGPCG
Trigger: GCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCG...CGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp GGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCACAGGCGGCCTCCATGTaGCTCGCGCAGCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: GSCRPPPSAGVTGTACLPQAASM*LAQLRP
Trigger: GGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTG...TGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCAGGCGGCCTCCATGTaGCTCGCGCAGCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHQAASM*LAQLRP
Trigger: GGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCCTGACGCGTTTGGGGTaGTGCAGGCCTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: LAHQARVGLDQEVRQVPALTRLG*CRPGAG
Trigger: CCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAG...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCTGTCAGCCTTCTCATTaGTGGTCAGGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: CSAPCTASSPKTRARAQRCQPSH*WSGAGG
Trigger: CCCGCCTGCCCCTGACCACCAATGAGAAGGCTGACA...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCAGGGCCTGGAGCTGCTaGCGGGTCAGTGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LAHQARVGLDQEVRQVPARAWSC*RVSAQP
Trigger: GGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCT...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000530092.2
CDS-3UTR CCA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCGCTACACTGGCAGGCTaGGGATGGAGACTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CSAPCTASSPKTRARAQRATLAG*GWRLWG
Trigger: ACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGC...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CCTCCCGCACCACGGCCAAAAGGCTGTTCCAAAGGAAGCGCCGCGCGCTGGGGTAGTGTGGTGATGCTGTaGGCGTGGCGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPAPRPKGCSKGSAARWGSVVML*AWRAGP
Trigger: AGGCCCGGCCCGCCACGCCCACAGCATCACCACACT...ACCCCAGCGCGCGGCGCTTCCTTTGGAACAGCCTTTTGGCCGTGGTGCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp GAAGGCCGCTGCCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTGCAGCGCAGGGGTGACTaGAACTGCCTGTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: EGRCRLGPCGGHPQGQCVQRRGD*NCLSPK
Trigger: CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTG...CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp GAAGGCCGCTGCCGGCTGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTGGGCTGTGGCAGGAGTTaGCTTCGGTGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EGRCRLGPCGGHPQGQCVGCGRS*LRCCSS
Trigger: ACTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCC...CACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp GAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGGCGGTCTGGGCAACCTaGGCCTCCGGGACACCGCGC +
Preference number: 4 (lower is better)
Translates to: EGPLYHHGQEVLADHLPAAVWAT*ASGTPR
Trigger: GCGCGGTGTCCCGGAGGCCCAGGTTGCCCAGACCGC...CGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCTCCCGGCGGCAGCTaGAAGCGCAGGCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPPGGS*KRRRPP
Trigger: TGGAGGCCGCCTGCGCTTCCAGCTGCCGCCGGGAGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp CCGGGCACCGGGCCGGCTACACTGGCAGGCTGGGGATGGAGACTCTGGGGTCCAGGCGCGGGTAGGTCTTaGCCAGGAAGTCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: PGTGPATLAGWGWRLWGPGAGRS*PGSQTG
Trigger: ACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCC...TGGACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGGTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGGCTCCGCAGCTCTTaGCGCCTTCCCTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGLRSS*RLPSAQ
Trigger: CTGGGCGGAGGGAAGGCGGCAAGAGCTGCGGAGCCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGAGCCAGGGCACGGTaGCCGCCGATGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGARAR*PPMAVA
Trigger: AGCCACTGCCATCGGCGGGCACCGTGCCCTGGCTCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCCACGTTGTGCCACTaGGCGCCCTCGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPTLCH*APSPCS
Trigger: GGAGCAGGGCGAGGGCGCGCAGTGGCACAACGTGGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCCGGATGGCGGCCATaGTGGAGCGGACGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHAGWRP*WSGRRG
Trigger: GCCACGACGTCCGCTCCAGCATGGCCGCCATCCGGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp GCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGCTGCTGGCGGGTCAGTaGCCAGCCCTGTACCCGGCC +
Preference number: 4 (lower is better)
Translates to: APVSPWPRGSCRPPPSAGLLAGQ*PALYPA
Trigger: GGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAG...CCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAGGGGGACCACCAGCTaGAGCCGGGCAGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RFLPTTSQRRGDWNCLSPRGTTS*SRAVGQ
Trigger: CTGCCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCT...GGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAACGAGGAGGCCATCAGTaGACCCTCAGACAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QLEAQAASMCLAQLRPRERGGHQ*TLRQLL
Trigger: GAGCAGCTGTCTGAGGGTGCACTGATGGCCTCCTCG...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCGCCACGAAGGCCGCTaGCGGCTGGGACCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRHEGR*RLGPCG
Trigger: GCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACACGCGTTTGGGGTGCTaGAGGCCTGGCGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHTRLGC*RPGAGS
Trigger: GGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCTGACGCGTTTGGGGTaGTGCAGGCCTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHLTRLG*CRPGAG
Trigger: CCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCCCGGGCCGGCTACACTaGCAGGCTGGGGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: LAHQARVGLDQEVRQVPAPGRLH*QAGDGD
Trigger: GTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGG...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000530092.2
CDS-3UTR CCA 90 bp GGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGAGCCGGTCACTGCCTaGGGCGGAGGGGGACCACCA +
Preference number: 4 (lower is better)
Translates to: GPLYHHGQEVLADHLPAQEPVTA*GGGGPP
Trigger: TGGTGGTCCCCCTCCGCCCCAGGCAGTGACCGGCTC...CTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCCCGGGCCACGCTGTaGCCTGCCAGCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSRATL*PASTAS
Trigger: CGAGGCTGTGCTGGCAGGCCACAGCGTGGCCCGGGA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCGGTCTGGGCAACCTaGGCCTCCGGGACACCGCGC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGAVWAT*ASGTPR
Trigger: GCGCGGTGTCCCGGAGGCCCAGGTTGCCCAGACCGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTGACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGCCCGAGCCAGCGGTCTaGGCAACCTGGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LTSFTHFLVFRPWRTRRGPEPAV*ATWASG
Trigger: CCCGGAGGCCCAGGTTGCCCAGACCGCTGGCTCGGG...CCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGGGTGCTGCAGGCCTaGCGCGGGGTCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGVLQA*RGVHSH
Trigger: GTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAAGGGTCATCGAGGAACTaGCTGACGCGTTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QLEAQAASMCLAQLRPREGSSRN*LTRLGC
Trigger: GCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCC...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGACAACGGTCGGGCTaGAGACGTGCGGTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGQRSG*RRAVRL
Trigger: CAGCCGCACCGCACGTCTTCAGCCCGACCGTTGTCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGGGGTTGGCGCCGCTaGGCACGCGGACGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLGGWRR*ARGRLH
Trigger: GTGCAGCCGTCCGCGTGCTCAGCGGCGCCAACCCCC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAACCTGTGGCGGCATCTTaGGCCGTAGGGTTACGTCTA +
Preference number: 4 (lower is better)
Translates to: QLEAQAASMCLAQLRPREPVAAS*AVGLRL
Trigger: TAGACGTAACCCTACGGCTCAAGATGCCGCCACAGG...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCGCAGGGTCAGTGTGTaGCCCGCCGCGAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRRVSV*PAANLP
Trigger: GGGCAGATTCGCGGCGGGTCACACACTGACCCTGCG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp AGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCCGCAGGGTCAGTGTGTaGCCCGCCGCGAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: RFLPTTSQRRGDWNCLSPRRVSV*PAANLP
Trigger: GGGCAGATTCGCGGCGGGTCACACACTGACCCTGCG...GGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGTCGGGCTGAAGACGTaGGGTGCGGCTGCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHVGLKT*GAAAGN
Trigger: GTTGCCCGCAGCCGCACCGCACGTCTTCAGCCCGAC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTGCTGGCGGGTCAGTaGCCAGCCCTGTACCCGGCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLLAGQ*PALYPA
Trigger: GGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCCGTGCTCTGCGCCGTaGACCGCCAGCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CRPPPSAGVTGTACLPSAPCSAP*TASSPK
Trigger: CTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGG...AGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTGGTGAGGTTCAAGGGGTGGTTGAGTGTGGTGATGCTGTGGGCGTGGCGGGCCCTCCACGCCGTGCTCTaGGCCGTGCACCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVRFKGWLSVVMLWAWRALHAVL*AVHRQL
Trigger: GAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAG...GGCCCGCCACGCCCACAGCATCACCACACTCAACCACCCCTTGAACCTCACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTCCACGCCGTGCTCTaGGCCGTGCACCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLHAVL*AVHRQL
Trigger: GAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTGGTGAGGTTCAAGGGGTGGTTGAGTGTGGTGATGCTGTGGGCGTGGCGGGCCACGCGTTTGGGGTGCTaGAGGCCTGGCGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LVRFKGWLSVVMLWAWRATRLGC*RPGAGS
Trigger: GGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGT...GGCCCGCCACGCCCACAGCATCACCACACTCAACCACCCCTTGAACCTCACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCGTTTGGGGTGCTaGAGGCCTGGCGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGTRLGC*RPGAGS
Trigger: GGACCCCGCGCCAGGCCTGCAGCACCCCAAACGCGT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTGACGCGTTTGGGGTaGTGCAGGCCTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLTRLG*CRPGAG
Trigger: CCCCGCGCCAGGCCTGCAGCACCCCAAACGCGTCAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAGCGCCAGGAGCTCCTaGGCCAGGTCCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSARSS*ARSSAA
Trigger: GGCCGCTGAGGACCTGGCCCAGGAGCTCCTGGCGCT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGGCCGCAGCCAGGTTaGCGCGGGAGAAGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRPQPG*RGRRRR
Trigger: GCGCCTTCTTCTCCCGCGCCAACCTGGCTGCGGCCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGATGGCGGCCATGCTaGAGCGGACGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGWRPC*SGRRGP
Trigger: TGGGCCACGACGTCCGCTCCAGCATGGCCGCCATCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CGGTCACTGCCTGGGGCGGAGGGGGACCACCAGCTGCAGCCGGGCAGTCGGGCACACTGGCCAAGACCTTaGCCACTTCAGCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: RSLPGAEGDHQLQPGSRAHWPRP*PLQQEL
Trigger: AAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTG...TGCCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCTCCGCCCCAGGCAGTGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR CCA 90 bp AGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCCCGGGCCGGCTACACTaGCAGGCTGGGGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RFLPTTSQRRGDWNCLSPPGRLH*QAGDGD
Trigger: GTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGG...GGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGAGCCGGTCACTGCCTaGGGCGGAGGGGGACCACCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGEPVTA*GGGGPP
Trigger: TGGTGGTCCCCCTCCGCCCCAGGCAGTGACCGGCTC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAACTGGGGCGTCCTCACTaGGCGAACAGGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LLSLQALAHQARVGLDQELGRPH*ANRPRR
Trigger: CCGCCGCGGCCTGTTCGCCCAGTGAGGACGCCCCAG...TTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR CCA 90 bp GGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGTGGCAAGCAGTGGCTaGGCCCCCACCCGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: GPCITMAKRFLPTTSQRRVASSG*APTRPS
Trigger: GCTTGGACGGGTGGGGGCCCAGCCACTGCTTGCCAC...CCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGGGCCCGAGGCAGCTaGGGAACCAGCCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRARGS*GTSLAR
Trigger: TCTGGCTAGGCTGGTTCCTCAGCTGCCTCGGGCCCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCAGCAGTGCGGCGCTaGGCAGGAAGGGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLPAVRR*AGRARG
Trigger: GCCTCGGGCCCTTCCTGCTCAGCGCCGCACTGCTGG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp GGGCTACATCCTCGTCCTCCTCTCCCAGGAGTGGCAGAGACCTCACCCTGGGCTCGTCGTGGCCCAGGATaGAGGCAGAGCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: GLHPRPPLPGVAETSPWARRGPG*RQSHHW
Trigger: CCAGTGGTGGCTCTGCCTTCATCCTGGGCCACGACG...AGCCCAGGGTGAGGTCTCTGCCACTCCTGGGAGAGGAGGACGAGGATGTAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp GGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGCCGGTCTGCGTACCATaGGAGTCCCAGACGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GPLYHHGQEVLADHLPAQPVCVP*ESQTRQ
Trigger: CTGGCGCGTCTGGGACTCTCATGGTACGCAGACCGG...CTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGAGGTGAGCATCACTaGACGGCCCTCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGGEHH*TALPHH
Trigger: GTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCGCAGGGTCAGTGTGTaGCCCGCCGCGAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRRVSV*PAANLP
Trigger: GGGCAGATTCGCGGCGGGTCACACACTGACCCTGCG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCTGAAGACGTGCGGTaGGGCTGCGGGCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHAEDVR*GCGQLP
Trigger: AGGGAGTTGCCCGCAGCCGCACCGCACGTCTTCAGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTGGGCCGTGCTGCGTaGAGCCCTCAGCGTGGCGAT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLGRAA*SPQRGD
Trigger: ATCGCCACGCTGAGGGCTGCACGCAGCACGGCCCAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGTTGAGGCTGGGCCGTaGTGCGTGCAGCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGVEAGP*CVQPSA
Trigger: CGCTGAGGGCTGCACGCAGCACGGCCCAGCCTCAAC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGAAGCTCCACCAGGCTaGGCAGCGCCAGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHEAPPG*AAPGAP
Trigger: AGGAGCTCCTGGCGCTGCGCAGCCTGGTGGAGCTTC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGCGTGCCCACCAGGTaGCCCACATCAGCGTGTGCG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSVPTR*PTSACA
Trigger: CGCACACGCTGATGTGGGGCACCTGGTGGGCACGCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTGTTCCGCGAGCAGTTaGAGGGCCCGCGACACCAGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHCSASS*RARDTR
Trigger: CCTGGTGTCGCGGGCCCTGCAACTGCTCGCGGAACA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp GTCAGACAGGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACCTGCTGGCGGGTCAGTaGCCAGCCCTGTACCCGGCC +
Preference number: 4 (lower is better)
Translates to: VRQVPACQVLNHFPRAGHLLAGQ*PALYPA
Trigger: GGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAG...GTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACCTGTCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCCAGTCCTGCCTCCTaGAGCAGCGCCTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSSPAS*SSASSS
Trigger: GCTGCTCGAGGCGCTGCTGCAGGAGGCAGGACTGGA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGGCTCCTCCAGTCCTaGCTCCTGCAGCAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGLLQS*LLQQRL
Trigger: GAGGCGCTGCTGCAGGAGGCAGGACTGGAGGAGCCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CAGACAGGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGAGGGGGACCACCAGCTaGAGCCGGGCAGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QTGSGLSGSEPLPQSRSLRGTTS*SRAVGQ
Trigger: CTGCCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCT...CAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACCTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTGCCGGCTGGGACCTTaGGGCGGGCACCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPCRLGP*GGHPQG
Trigger: ACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACGCCACGAAGGCCGCTaGCGGCTGGGACCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLRHEGR*RLGPCG
Trigger: GCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACAGGCGGCCTCCATGTaGCTCGCGCAGCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLQAASM*LAQLRP
Trigger: GGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCGTGCTCTGCGCCGTaGACCGCCAGCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPCSAP*TASSPK
Trigger: CTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTGCTCCAGGGGCGGGTaGGAGTGGCGAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGCSRGG*EWRTAT
Trigger: GGTGGCTGTTCGCCACTCCCACCCGCCCCTGGAGCA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAAGGGCTCCTGGGCTTaGCCCAGTGCCAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHKGSWA*PSANPR
Trigger: CCTGGGGTTGGCACTGGGCCAAGCCCAGGAGCCCTT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCCAGGGGGCCGCTaGTCCCTCGGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGTPGGR*SLGVSA
Trigger: TGCAGAGACCCCGAGGGACCAGCGGCCCCCTGGAGT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCAGGGGGTCCGCGGCTaGGCCAGGGTCCCAAAACCT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGQGVRG*ARVPKP
Trigger: AGGTTTTGGGACCCTGGCCCAGCCGCGGACCCCCTG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCTTCCAGGTACCAGGTaGCGAGGCCGTAGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHLPGTR*RGRRAP
Trigger: CGGCGCTCTACGGCCTCGCCACCTGGTACCTGGAAG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAAAGAGGCCACTCAAGATaGACAGGGTGGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QLEAQAASMCLAQLRPRERGHSR*TGWWSC
Trigger: GCAAGACCACCACCCTGTCCATCTTGAGTGGCCTCT...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCCTGGAGCGGACGTCGTaGCCCAGGATGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LAHQARVGLDQEVRQVPALERTS*PRMKAE
Trigger: CTCTGCCTTCATCCTGGGCCACGACGTCCGCTCCAG...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp AGGGCAGTGGCAAGCAGTGGCTGGGCCCCCACCCGTCCAAGCAGCCCCCGCACCCACTGGCCAAGACCTTaGCCACTTCAGCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: RAVASSGWAPTRPSSPRTHWPRP*PLQQEL
Trigger: AAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTG...GGTGCGGGGGCTGCTTGGACGGGTGGGGGCCCAGCCACTGCTTGCCACTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCCGGGCCGGCTACACTaGCAGGCTGGGGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGPGRLH*QAGDGD
Trigger: GTCTCCATCCCCAGCCTGCCAGTGTAGCCGGCCCGG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp GTCAGACAGGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACGAGCCGGTCACTGCCTaGGGCGGAGGGGGACCACCA +
Preference number: 4 (lower is better)
Translates to: VRQVPACQVLNHFPRAGHEPVTA*GGGGPP
Trigger: TGGTGGTCCCCCTCCGCCCCAGGCAGTGACCGGCTC...GTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACCTGTCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCCTGGGTGGCTCCTTaGACCACCCGCTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPWVAP*TTRSRS
Trigger: TGAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCTCACCATGCGAAACGTaGACGTCTTCCCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: CSAPCTASSPKTRARAQRSPCET*TSSLLH
Trigger: ATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGA...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp AGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCCAGCCTCGCCCCTGCTaGCCAATGTGTCCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RGPCITMAKRFLPTTSQRQPRPC*PMCPPS
Trigger: TGACGGGGGACACATTGGCCAGCAGGGGCGAGGCTG...GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCGGTCTGGGCAACCTaGGCCTCCGGGACACCGCGC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPAVWAT*ASGTPR
Trigger: GCGCGGTGTCCCGGAGGCCCAGGTTGCCCAGACCGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCCGAGCCAGCGGTCTaGGCAACCTGGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPEPAV*ATWASG
Trigger: CCCGGAGGCCCAGGTTGCCCAGACCGCTGGCTCGGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAAGGCCGCTGCCGGCTaGGACCTTGCGGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLKAAAG*DLAAGT
Trigger: GGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCTCCCGGCGGCAGCTaGAAGCGCAGGCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPPGGS*KRRRPP
Trigger: TGGAGGCCGCCTGCGCTTCCAGCTGCCGCCGGGAGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGGGGTGCTGCAGGCCTaGCGCGGGGTCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPGVLQA*RGVHSH
Trigger: GTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCGTCGTGGCCCAGGATaGAGGCAGAGCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRRGPG*RQSHHW
Trigger: CCAGTGGTGGCTCTGCCTTCATCCTGGGCCACGACG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCGTCAGTCTCTGGGGCTaGCCCAGCTGGTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: WPRGSCRPPPSAGVTGTAVSLWG*PSWFPV
Trigger: AACGGGGAACCAGCTGGGTCAGCCCCAGAGACTGAC...GGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp GGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCTGCCCTTGAGATGTTGCCACAACTCCTCCACTaGGCGGCCCAACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GHPQGQCVTRRESALEMLPQLLH*AAQLLA
Trigger: GGCCAAGAGTTGGGCCGCTCAGTGGAGGAGTTGTGG...CAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp GGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGTCCGCACCATGTCAATaGGCCCCCGGCCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GPLYHHGQEVLADHLPAQSAPCQ*APGPSR
Trigger: TCTGCTTGGGCCGGGGGCTCATTGACATGGTGCGGA...CTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCCGGTCTGCGTACCATaGGAGTCCCAGACGCGCCAG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGPVCVP*ESQTRQ
Trigger: CTGGCGCGTCTGGGACTCTCATGGTACGCAGACCGG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp ACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGGAGGTGAGCATCACTaGACGGCCCTCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: TTSQRRGDWNCLSPKRSKGGEHH*TALPHH
Trigger: GTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCC...CTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGAGGTGAGCATCACTaGACGGCCCTCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGGEHH*TALPHH
Trigger: GTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp GGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGACCGCCCATTCACCATaGTGGCCAGGCGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GPLYHHGQEVLADHLPAQTAHSP*WPGASR
Trigger: TCTGCTCGCGCCTGGCCATCATGGTGAATGGGCGGT...CTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp AAAAGTCCTCCACGCCGTGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCCCGCGAATCTGCCCTTaGGATGTTGCGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KSPPRRALRRAPPALQRRPRICP*DVAGCP
Trigger: TGGGCAGCCCGCAACATCTCAAGGGCAGATTCGCGG...GCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGACGTGCGGTGCGGCTaGGGGCAACTCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPDVRCG*GQLPAP
Trigger: AGGGGCAGGGAGTTGCCCGCAGCCGCACCGCACGTC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCGGATTCTGGCTCCTaGCCCACCAGCTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHADSGS*PTSSIR
Trigger: CCTGATGGAGCTGGTGGGGCAGGAGCCAGAATCCGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCCCACATCAGCGTGTaGGTCCTGCCAGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPHISV*VLPAVA
Trigger: GGCTACAGCTGGCAGGACGCACACGCTGATGTGGGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCAGGCTGAAGACGTCTaGCGTAGGCCGGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGQAEDV*RRPGAH
Trigger: GTGGGCACCCGGCCTACGGCAGACGTCTTCAGCCTG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGCGCTTCTCCAGGCTaGGAACGGAGACGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSASPG*ERRRQD
Trigger: GTCCTGGCGTCTCCGTTCGCAGCCTGGAGAAGCGCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CCTCAAGACTTTACCCAGGCCATCTTGGACAAGCCCCTGCCTACAAGGGGCCAGGCCGGATGGCGGCCATaGTGGAGCGGACGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: PQDFTQAILDKPLPTRGQAGWRP*WSGRRG
Trigger: GCCACGACGTCCGCTCCAGCATGGCCGCCATCCGGC...CTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCCCCGGGCACCCAGTaGTGTACCAGGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLAPGTQ*CTRASS
Trigger: GCTGCTGGCCCTGGTACAGCACTGGGTGCCCGGGGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp GAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTGCCCCGGGCACCCAGTaGTGTACCAGGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGRGAPVSPWPRGSCRPPAPGTQ*CTRASS
Trigger: GCTGCTGGCCCTGGTACAGCACTGGGTGCCCGGGGC...AGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCAAGCAGGGCCTGGAGCTaGTGGCGGGTCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SQRRGDWNCLSPKRSKASSRAWS*WRVSAQ
Trigger: CTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCT...TGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CAGACAGGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGAGCAGGGCCTGGAGCTaGTGGCGGGTCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QTGSGLSGSEPLPQSRSLSRAWS*WRVSAQ
Trigger: CTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCT...CAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACCTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TGGGGATGGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCACTTCGGGCTCCTCCAGTCCTaGCTCCTGCAGCAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: WGWRLWGPVATGQDLGHFGLLQS*LLQQRL
Trigger: GAGGCGCTGCTGCAGGAGGCAGGACTGGAGGAGCCC...GAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGGGGACCACCAGCTaGAGCCGGGCAGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRGTTS*SRAVGQ
Trigger: CTGCCCGACTGCCCGGCTGCAGCTGGTGGTCCCCCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp GAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCCCATGAGCTGCAGGTaGTTGGCTCGGGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: EGPLYHHGQEVLADHLPAPMSCR*LARVTR
Trigger: GCGAGTCACCCGAGCCAAGCACCTGCAGCTCATGGG...CGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCGAGCACCACGATGCATaGTGGCACCAAGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: CSAPCTASSPKTRARAQREHHDA*WHQVVT
Trigger: TGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTC...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGCAGGGGCCACATATaGCCTCTGCTGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGRGHI*PLLEGQ
Trigger: CTGGCCTTCCAGCAGAGGGCATATGTGGCCCCTGCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCCGCTGTAGGTGCCTaGAGGCCGGTCTGCGTACCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSAVGA*RPVCVP
Trigger: TGGTACGCAGACCGGCCTGCAGGCACCTACAGCGGA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCCCTCCGCTGTAGGTaGCTGCAGGCCGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSLRCR*LQAGLR
Trigger: ACGCAGACCGGCCTGCAGGCACCTACAGCGGAGGGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTGACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTCCCTCCGCTGTAGGTaGCTGCAGGCCGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: LTSFTHFLVFRPWRTRRGSLRCR*LQAGLR
Trigger: ACGCAGACCGGCCTGCAGGCACCTACAGCGGAGGGA...CCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGGCCGTCGCCAGCTTaGGTTTGTTCCCTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGPSPA*VCSLRC
Trigger: ACAGCGGAGGGAACAAACGCAAGCTGGCGACGGCCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGTGCCGGCTGGGACCTTaGGGCGGGCACCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMCRLGP*GGHPQG
Trigger: ACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCA...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACTCCACGCCGTGCTCTaGGCCGTGCACCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLLHAVL*AVHRQL
Trigger: GAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAGGGGCGGGTGGGAGTaGCGAACAGCCACCAGGATG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRGGWE*RTATRM
Trigger: CATCCTGGTGGCTGTTCGCCACTCCCACCCGCCCCT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCAGCCAGCGTCCTGTaGGCACTGGCCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPASVL*ALAPPS
Trigger: GCTGGGAGGGGCCAGTGCCCACAGGACGCTGGCTGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCCGGGGCCCAGGTCTaGGGTTGGGTGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLAGAQV*GWVLCG
Trigger: CCCACAGAGCACCCAACCCCAGACCTGGGCCCCGGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCCCCATGGCGCGCATaGTGTCCCGCAGCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLAPWRA*CPAAAS
Trigger: AGACGCGGCTGCGGGACACCATGCGCGCCATGGGGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCAGGTGGGGCCGGATaGCGGCCATGCTGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPGGAG*RPCWSG
Trigger: TCCGCTCCAGCATGGCCGCCATCCGGCCCCACCTGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCAGCCTTCTCATTGGTaGTCAGGGGCAGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHQPSHW*SGAGGP
Trigger: AGGCCCGCCTGCCCCTGACCACCAATGAGAAGGCTG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGGCCTGGAGCTGCTaGCGGGTCAGTGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRAWSC*RVSAQP
Trigger: GGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCAGGCAGCACGATCTaGGCGAACAGGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLAGSTI*ANRPRR
Trigger: CCGCCGCGGCCTGTTCGCCCAGATCGTGCTGCCTGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp GGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGAGCTATGCTGCACTaGGGGCTCCTCCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPLYHHGQEVLADHLPAQGAMLH*GLLQSC
Trigger: GCAGGACTGGAGGAGCCCCCAGTGCAGCATAGCTCC...CTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCTCACCCTGGGCTGTaGCAGGAGTTGGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPHPGL*QELASV
Trigger: CACCGAAGCCAACTCCTGCCACAGCCCAGGGTGAGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp GGGCTACATCCTCGTCCTCCTCTCCCAGGAGTGGCAGAGACCTCACCCTGGGCTCCTCACCCTGGGCTGTaGCAGGAGTTGGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: GLHPRPPLPGVAETSPWAPHPGL*QELASV
Trigger: CACCGAAGCCAACTCCTGCCACAGCCCAGGGTGAGG...AGCCCAGGGTGAGGTCTCTGCCACTCCTGGGAGAGGAGGACGAGGATGTAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCTCCTCTCCCAGGAGTaGCAGAGACCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHLLSQE*QRPHPG
Trigger: CCCAGGGTGAGGTCTCTGCCACTCCTGGGAGAGGAG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCAGCCTCGCCCCTGCTaGCCAATGTGTCCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGQPRPC*PMCPPS
Trigger: TGACGGGGGACACATTGGCCAGCAGGGGCGAGGCTG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATCCCGGGCCACGCTGTaGCCTGCCAGCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLSRATL*PASTAS
Trigger: CGAGGCTGTGCTGGCAGGCCACAGCGTGGCCCGGGA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp GGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGCAGAAACACCACGGCTaGGTCCCCAACCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GPCITMAKRFLPTTSQRRQKHHG*VPNQRQ
Trigger: CTGGCGCTGGTTGGGGACCCAGCCGTGGTGTTTCTG...CCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp AAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCAAGGCCGCTGCCGGCTaGGACCTTGCGGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: KRRKRGPCITMAKRFLPTKAAAG*DLAAGT
Trigger: GGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTT...GGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp AAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCGGGGTGCTGCAGGCCTaGCGCGGGGTCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: KRRKRGPCITMAKRFLPTGVLQA*RGVHSH
Trigger: GTGGGAGTGGACCCCGCGCCAGGCCTGCAGCACCCC...GGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAGACCAGGGAGTCGTTaGAGTTGCTCAGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRPGSR*SCSGAR
Trigger: CCGGGCGCCTGAGCAACTTCAACGACTCCCTGGTCT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCACCAGGGCTGCCTCTaGGGGTGCCGCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPHQGCL*GCRLQL
Trigger: AAGCTGGAGGCGGCACCCTCAGAGGCAGCCCTGGTG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGGAGAAGAAGGCGCTaGGCAGGAAGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGRRRR*AGSSGS
Trigger: TGACCCAGAGCTTCCTGCTCAGCGCCTTCTTCTCCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGGTAGAAGTCCAGGCTaGGCCCCCGCAGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPGRSPG*APAGLA
Trigger: AGCCAGCCCTGCGGGGGCTCAGCCTGGACTTCTACC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CTGACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGCGGCCTGTCAGGTTCTaGACCACTTCCCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LTSFTHFLVFRPWRTRRGRPVRF*TTSPEP
Trigger: CGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCG...CCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000530092.2
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCCGCACCATGTCAATaGGCCCCCGGCCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSAPCQ*APGPSR
Trigger: TCTGCTTGGGCCGGGGGCTCATTGACATGGTGCGGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGTCCGCACCATGTCAATaGGCCCCCGGCCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FLPTTSQRRGDWNCLSPKSAPCQ*APGPSR
Trigger: TCTGCTTGGGCCGGGGGCTCATTGACATGGTGCGGA...CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR TCA 90 bp TGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCCATGCTATGGGAGGTaGGCATCACTGAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: CRPPPSAGVTGTACLPSAPCYGR*ASLNGP
Trigger: AGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGG...AGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCGCCCATTCACCATaGTGGCCAGGCGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGTAHSP*WPGASR
Trigger: TCTGCTCGCGCCTGGCCATCATGGTGAATGGGCGGT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCCGCGAATCTGCCCTTaGGATGTTGCGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGPRICP*DVAGCP
Trigger: TGGGCAGCCCGCAACATCTCAAGGGCAGATTCGCGG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCATCGAGGAACTGGCTaGCGCGTTTGGGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHHRGTG*RVWGAA
Trigger: TGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp GGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGCATCGAGGAACTGGCTaGCGCGTTTGGGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPLYHHGQEVLADHLPAQHRGTG*RVWGAA
Trigger: TGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATG...CTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAAGTGGCATTCATGGTaGTCCAGGGGCGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHKWHSW*SRGGWE
Trigger: CTCCCACCCGCCCCTGGAGCACCATGAATGCCACTT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCCCTCCCAGCACAGTaGGGGCATCGGCTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPLPAQ*GHRLAA
Trigger: GGCTGCTAGCCGATGCCCGCACTGTGCTGGGAGGGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACACTCAGGCCGGGCGGTaGCTCTTCTACCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHTQAGR*LFYQHL
Trigger: AAGGTGCTGGTAGAAGAGGCACCGCCCGGCCTGAGT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCACAAGCGGCCACCTaGCACCACGGCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPAQAAT*HHGHTV
Trigger: GACCGTGTGGCCGTGGTGGCAGGTGGCCGCTTGTGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGAGGAGTGCCGACTCTaGTGCCCTGGCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHEECRL*CPGCHS
Trigger: AGAATGGCAGCCAGGGCAGCAGAGTCGGCACTCCTC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCCTGTGCATAGGTGCTaGCCGCAGCTGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGPVHRC*PQLPSS
Trigger: GGAGGATGGCAGCTGCGGGCAGCACCTATGCACAGG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp GGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCTGCCCTTGAGATGTTGATGCCTGTGCATAGGTaGTGCCCGCAGCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: GHPQGQCVTRRESALEMLMPVHR*CPQLPS
Trigger: GGATGGCAGCTGCGGGCAGCACCTATGCACAGGCAT...CAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGCCAGCAATGCCTGTaGATAGGTGCTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGQQCL*IGAARS
Trigger: GCTGCGGGCAGCACCTATGCACAGGCATTGCTGGCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCAGGGCCTGGAGCTaGTGGCGGGTCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSRAWS*WRVSAQ
Trigger: CTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TGGGGATGGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCACTTCTCCAGTCCTGCCTCCTaGAGCAGCGCCTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WGWRLWGPVATGQDLGHFSSPAS*SSASSS
Trigger: GCTGCTCGAGGCGCTGCTGCAGGAGGCAGGACTGGA...GAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp GGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCCTGGGCTGTGGGAGCTATGCTaGACTGGGGGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GSGLSGSEPLPQSRSLPGLWELC*TGGSSS
Trigger: ACTGGAGGAGCCCCCAGTGCAGCATAGCTCCCACAG...CCCAGGCAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACTGCCTGGGGCGGAGGGGGACTCTGGGGTCCAGTTaGCACTGGCCAAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CQVLNHFPRAGHCLGRRGTLGSS*HWPRPW
Trigger: CCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGT...CCCCCTCCGCCCCAGGCAGTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTGGCCAAGAGGTTCTTaGCGACCACCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHWPRGS*RPPPSA
Trigger: TGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCACAGCCTCGCCCCTaGTGGCCAATGTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPAQPRP*WPMCPP
Trigger: CGGGGGACACATTGGCCAGCAGGGGCGAGGCTGTGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCAAGCAGCTCCAGGTaGTCGCGGCCCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPASSSR*SRPVSS
Trigger: GCTGCTGACGGGCCGCGAGCACCTGGAGCTGCTTGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCAGCCATGGCCTGGTTCCGCACCATGTCAATGAGCCCCCGGCCCAAGCAGAAGGGGCCGTCGCCAGCTTaGGTTTGTTCCCTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SAMAWFRTMSMSPRPKQKGPSPA*VCSLRC
Trigger: ACAGCGGAGGGAACAAACGCAAGCTGGCGACGGCCC...CTTCTGCTTGGGCCGGGGGCTCATTGACATGGTGCGGAACCAGGCCATGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAAGTCCTCCACGCCGTaGTCTGCGCCGTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLKSSTP*SAPCTA
Trigger: GGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAGTCCTCCACGCCGTaGTCTGCGCCGTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPKSSTP*SAPCTA
Trigger: GGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCACGGTGCCCGCCGATaGCAGTGGCTTGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHHGARR*QWLVWE
Trigger: TTCCCAAACAAGCCACTGCCATCGGCGGGCACCGTG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTTACAGATGAGACCCTaGAGCCAGGGCACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHLQMRP*SQGTVP
Trigger: GGGCACCGTGCCCTGGCTCCAGGGTCTCATCTGTAA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCAGTGGAGACTGCTTaGTTGGTTGAGGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPVETA*LVEAGP
Trigger: CGGCCCAGCCTCAACCAACCAAGCAGTCTCCACTGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCAGGGATCCCGTACTaGCCTGGGCACACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSGIPY*PGHTAS
Trigger: GGAAGCTGTGTGCCCAGGCCAGTACGGGATCCCTGA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCCTCATCCAGGTGGTaGGTGGAGAGGATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHASSRW*VERISV
Trigger: CACGCTGATCCTCTCCACCCACCACCTGGATGAGGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp AGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCGCCTCATCCAGGTGGTaGGTGGAGAGGATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RGPCITMAKRFLPTTSQRASSRW*VERISV
Trigger: CACGCTGATCCTCTCCACCCACCACCTGGATGAGGC...GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTGACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTCTGGCCCAGAGCCCTaGTCAGTCTCTGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LTSFTHFLVFRPWRTRRGSGPEP*SVSGAD
Trigger: GTCAGCCCCAGAGACTGACCAGGGCTCTGGGCCAGA...CCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000530092.2
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGTGCCGAGAACCTGTaGGAGCTATGCTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGAENL*ELCCTG
Trigger: CCCAGTGCAGCATAGCTCCCACAGGTTCTCGGCACC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGTGTGGTGATGCTGTaGGCGTGGCGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSVVML*AWRAGP
Trigger: AGGCCCGGCCCGCCACGCCCACAGCATCACCACACT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGAGAGCAGGCAGGTTaGCAGGGGCCACATATGCCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGEQAG*QGPHMP
Trigger: GGGCATATGTGGCCCCTGCCAACCTGCCTGCTCTCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGCTGTGGCAGGAGTTaGCTTCGGTGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGCGRS*LRCCSS
Trigger: ACTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTCCTCTCCCAGGAGTaGCAGAGACCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLLSQE*QRPHPG
Trigger: CCCAGGGTGAGGTCTCTGCCACTCCTGGGAGAGGAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCAGAAACACCACGGCTaGGTCCCCAACCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGQKHHG*VPNQRQ
Trigger: CTGGCGCTGGTTGGGGACCCAGCCGTGGTGTTTCTG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CAGCTGGAAGCGCAGGCGGCCTCCATGTGCCTCGCGCAGCTCCGCCCCAGGGAACACTCCTCCATGCTATaGGAGGTGAGCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: QLEAQAASMCLAQLRPREHSSML*EVSITE
Trigger: TTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTG...TTCCCTGGGGCGGAGCTGCGCGAGGCACATGGAGGCCGCCTGCGCTTCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAACTGCAGAGGGCCTCTaGCAGCAACTCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLTAEGL*QQLQGA
Trigger: GGCCCCCTGGAGTTGCTGTCAGAGGCCCTCTGCAGT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGATGTCTCCCAGCTTaGGCACCAGAACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGCLPA*APEPAV
Trigger: CACTGCTGGTTCTGGTGCTCAAGCTGGGAGACATCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCAGGGCCAGCAGCTaGGGAGTGCCGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPTRASS*GVPTLL
Trigger: CAGCAGAGTCGGCACTCCTCAGCTGCTGGCCCTGGT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CCTCAAGACTTTACCCAGGCCATCTTGGACAAGCCCCTGCCTACAAGGGGCCAGACCAGGGCCAGCAGCTaGGGAGTGCCGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQDFTQAILDKPLPTRGQTRASS*GVPTLL
Trigger: CAGCAGAGTCGGCACTCCTCAGCTGCTGGCCCTGGT...CTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAGATCCCGTAGCCAGTaGGCCTCAGCTCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLRSRSQ*ASAPPA
Trigger: GGCTGGCGGAGCTGAGGCTCACTGGCTACGGGATCT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCCTGTGGCGGCATCTTaGGCCGTAGGGTTACGTCTA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHPVAAS*AVGLRL
Trigger: TAGACGTAACCCTACGGCTCAAGATGCCGCCACAGG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp GGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCACGTTGCTGGCTCGGTTaGCAAAGGCCACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: GSCRPPPSAGVTGTACLPRCWLG*QRPPWS
Trigger: ACTCCATGGTGGCCTTTGTCAACCGAGCCAGCAACG...TGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TTGGTGAGGTTCAAGGGGTGGTTGAGTGTGGTGATGCTGTGGGCGTGGCGGGCCGGCAGTATCCCATGCTaGGGTGCGCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVRFKGWLSVVMLWAWRAGSIPC*GAQHWV
Trigger: AACCCAGTGCTGCGCACCTCAGCATGGGATACTGCC...GGCCCGCCACGCCCACAGCATCACCACACTCAACCACCCCTTGAACCTCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGCAGTATCCCATGCTaGGGTGCGCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGSIPC*GAQHWV
Trigger: AACCCAGTGCTGCGCACCTCAGCATGGGATACTGCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCGGTCTGCGTACCATaGGAGTCCCAGACGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPVCVP*ESQTRQ
Trigger: CTGGCGCGTCTGGGACTCTCATGGTACGCAGACCGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGTCCCTCGGGGTCTCTaGAGCAGTGCCCGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLVPRGL*SSARSS
Trigger: GGAGCTTCGGGCACTGCTGCAGAGACCCCGAGGGAC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAGGCGGGGCTCAGGCTaGTGTCTGGCAGGGCGGATT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLRRGSG*CLAGRI
Trigger: AATCCGCCCTGCCAGACAGCAGCCTGAGCCCCGCCT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGAGCACGCGGACGGCTaGACGCTCCACCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLEHADG*TLHQVL
Trigger: CAAGACCTGGTGGAGCGTGCAGCCGTCCGCGTGCTC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATGCAGCAGACGGTCCTaGTCGGGGCCCACTACAGCG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLCSRRS*SGPTTA
Trigger: CGCTGTAGTGGGCCCCGAGCAGGACCGTCTGCTGCA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp AAAAGTCCTCCACGCCGTGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCCTGGTGTCCACACTaGCCTCCATGTCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KSPPRRALRRAPPALQRRAWCPH*PPCQCQ
Trigger: CTGACACTGACATGGAGGGCAGTGTGGACACCAGGC...GCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCGAGTGCCGACTCTGCTaGCCTGGCTGCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGPCITMAKRFLPTTSQRECRLC*PGCHSS
Trigger: AGAAGAATGGCAGCCAGGGCAGCAGAGTCGGCACTC...GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp GACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTACCTGTGCATAGGTGCTaGCCGCAGCTGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: DLIHPLLSLQALAHQARVPVHRC*PQLPSS
Trigger: GGAGGATGGCAGCTGCGGGCAGCACCTATGCACAGG...TACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGGCCAGCAATGCCTGTaGATAGGTGCTGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLSLQALAHQARVGLDQEGQQCL*IGAARS
Trigger: GCTGCGGGCAGCACCTATGCACAGGCATTGCTGGCC...TTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCGGGCTCCTCCAGTCCTaGCTCCTGCAGCAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: KRRKRGPCITMAKRFLPTGLLQS*LLQQRL
Trigger: GAGGCGCTGCTGCAGGAGGCAGGACTGGAGGAGCCC...GGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAACCCATGAGCTGCAGGTaGTTGGCTCGGGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: LLSLQALAHQARVGLDQEPMSCR*LARVTR
Trigger: GCGAGTCACCCGAGCCAAGCACCTGCAGCTCATGGG...TTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCAGGCAGGGGCCACATATaGCCTCTGCTGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQRRGDWNCLSPKRSKASGRGHI*PLLEGQ
Trigger: CTGGCCTTCCAGCAGAGGGCATATGTGGCCCCTGCC...TGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp GGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGAGGGGTGACTGGAACTaGCTGTCTCCCAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GPCITMAKRFLPTTSQRRRGDWN*LSPKRS
Trigger: TGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCT...CCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTGGCCAAGAGGTTCTTaGCGACCACCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGWPRGS*RPPPSA
Trigger: TGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTGTCCCCCGTCACCATaGGAAACGTGGACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHCPPSP*ETWTSS
Trigger: GGAAGACGTCCACGTTTCGCATGGTGACGGGGGACA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp ATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGTATCCCATGCTGAGGTaGGCAGCACTGGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: ITMAKRFLPTTSQRRGDWYPMLR*AALGSR
Trigger: CCGGGAACCCAGTGCTGCGCACCTCAGCATGGGATA...CCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTCCCTCCGCTGTAGGTaGCTGCAGGCCGGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSLRCR*LQAGLR
Trigger: ACGCAGACCGGCCTGCAGGCACCTACAGCGGAGGGA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCGTGCTCTGCGCCGTaGACCGCCAGCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPCSAP*TASSPK
Trigger: CTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCACGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp AAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCAAGTCCTCCACGCCGTaGTCTGCGCCGTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: KRRKRGPCITMAKRFLPTKSSTP*SAPCTA
Trigger: GGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTT...GGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGTCCACTCCCACTCCTaGCTCCTTCTGCTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHVHSHS*LLLLFG
Trigger: ACCGAAGAGCAGAAGGAGGCAGGAGTGGGAGTGGAC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp GGGCTACATCCTCGTCCTCCTCTCCCAGGAGTGGCAGAGACCTCACCCTGGGCTCTGGTGCCGAGAACCTaGAGACAATGGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GLHPRPPLPGVAETSPWALVPRT*RQWAVG
Trigger: TCCCACAGCCCATTGTCTGCAGGTTCTCGGCACCAG...AGCCCAGGGTGAGGTCTCTGCCACTCCTGGGAGAGGAGGACGAGGATGTAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCTCTTGGACAAGCCCCTaGCTACAAGGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SCRPPPSAGVTGTACLPSSWTSP*LQGARQ
Trigger: CTGTCTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGA...GCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCCCGCCGATGGCAGTaGCTTGTTTGGGAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGARRWQ*LVWEVA
Trigger: TGCCACTTCCCAAACAAGCCACTGCCATCGGCGGGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTGGCAGGGCGGATTCTaGCTCCTGCCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPWQGGF*LLPHQL
Trigger: GAGCTGGTGGGGCAGGAGCCAGAATCCGCCCTGCCA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGGACAGCGGGTaGCTGTCCAGGGCTCCAATC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRRDSG*LSRAPI
Trigger: GATTGGAGCCCTGGACAGCCACCCGCTGTCCCGCCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGAGCCGCTGCAGCATaGCCACATTGGAACTGTCGT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGAAAA*PHWNCR
Trigger: ACGACAGTTCCAATGTGGCCATGCTGCAGCGGCTCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCTCTGGGTCACCGTaGCCACCGCGAAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSSGSP*PPRRLP
Trigger: TGGCAGCCTTCGCGGTGGCCACGGTGACCCAGAGCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACTGAGCAGGAAGCTCTaGGTCACCGTGGCCACCGCG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLLSRKL*VTVATA
Trigger: CGCGGTGGCCACGGTGACCCAGAGCTTCCTGCTCAG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGATCCCGTACTGGCCTaGGCACACAGCTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHDPVLA*AHSFQV
Trigger: TACCTGGAAGCTGTGTGCCCAGGCCAGTACGGGATC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTTGGGTCCAGCGGGGTaGGGCAAGGGGCTGGACTCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPLGPAG*GKGLDS
Trigger: AGAGTCCAGCCCCTTGCCCCACCCCGCTGGACCCAA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTTCTACCAGCACCTTTaGGTCCAGCGGGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGFYQHL*VQRGGA
Trigger: TGCCCCACCCCGCTGGACCCAAAGGTGCTGGTAGAA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCAAGATGGACAGGGTaGTGGTCTTGCCGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSRWTG*WSCRPR
Trigger: ACGGGGCCGGCAAGACCACCACCCTGTCCATCTTGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGCCAGGTGGGGCCGGATaGCGGCCATGCTGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: CSSSVKRRKRGPCITMAKPGGAG*RPCWSG
Trigger: TCCGCTCCAGCATGGCCGCCATCCGGCCCCACCTGG...CTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACATCCCACCAGAGAGGTaGCGAGTCTGCACACTCTGC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHIPPER*RVCTLC
Trigger: GCAGAGTGTGCAGACTCGCCACCTCTCTGGTGGGAT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp GGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAATCCCACCAGAGAGGTaGCGAGTCTGCACACTCTGC +
Preference number: 4 (lower is better)
Translates to: GSCRPPPSAGVTGTACLPIPPER*RVCTLC
Trigger: GCAGAGTGTGCAGACTCGCCACCTCTCTGGTGGGAT...TGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCAGCACCAGCTCGTGTaGCAGCTCCTCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPQHQLV*QLLHQP
Trigger: CGGCTGGTGGAGGAGCTGCCACACGAGCTGGTGCTG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGATCTCCTCGAGGCTaGTGTCGGAGATCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRSPRG*CRRSRS
Trigger: GCTACGGGATCTCCGACACCAGCCTCGAGGAGATCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp GCTTCACACTCCTCCATGCTATGGGAGGTGAGCATCACTGAACGGCCCTCCCGCTCTGGCCCAGAGCCCTaGTCAGTCTCTGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ASHSSMLWEVSITERPSRSGPEP*SVSGAD
Trigger: GTCAGCCCCAGAGACTGACCAGGGCTCTGGGCCAGA...GCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTGTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp GCACAAGCGGTCAACAGCTGGCATCCTCTGCCCACGGTATACCTTGGTCAAGTTAGGGCCTGGAGCTGCTaGCGGGTCAGTGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AQAVNSWHPLPTVYLGQVRAWSC*RVSAQP
Trigger: GGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCT...AACTTGACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGTTGACCGCTTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp GCACAAGCGGTCAACAGCTGGCATCCTCTGCCCACGGTATACCTTGGTCAAGTTGCAGGCAGCACGATCTaGGCGAACAGGCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AQAVNSWHPLPTVYLGQVAGSTI*ANRPRR
Trigger: CCGCCGCGGCCTGTTCGCCCAGATCGTGCTGCCTGC...AACTTGACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGTTGACCGCTTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGGTCCAGTTGCCACTaGCCAAGACCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGSSCH*PRPWPL
Trigger: AAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp ACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGCAGCGCAGGGGTGACTaGAACTGCCTGTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TTSQRRGDWNCLSPKRSKQRRGD*NCLSPK
Trigger: CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTG...CTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGCTGTGGCAGGAGTTaGCTTCGGTGCTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGCGRS*LRCCSS
Trigger: ACTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCAACACATCCCCCTaGGTGGCTCCTTGGACCACC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGTNTSP*VAPWTT
Trigger: GGTGGTCCAAGGAGCCACCCAGGGGGATGTGTTGGT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCAGCCTCGCCCCTGCTaGCCAATGTGTCCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPQPRPC*PMCPPS
Trigger: TGACGGGGGACACATTGGCCAGCAGGGGCGAGGCTG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGTCCCGGGCCACGCTGTaGCCTGCCAGCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: CSSSVKRRKRGPCITMAKSRATL*PASTAS
Trigger: CGAGGCTGTGCTGGCAGGCCACAGCGTGGCCCGGGA...CTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGGTCATCGAGGAACTaGCTGACGCGTTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGSSRN*LTRLGC
Trigger: GCACCCCAAACGCGTCAGCCAGTTCCTCGATGACCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGGCAGTGGCAAGCAGTaGCTGGGCCCCCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: CEEKEEGPLYHHGQEVLAGSGKQ*LGPHPS
Trigger: GGACGGGTGGGGGCCCAGCCACTGCTTGCCACTGCC...GGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGACTGCTTGGTTGGTTaGGGCTGGGCCGTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLDCLVG*GWAVLR
Trigger: ACGCAGCACGGCCCAGCCTCAACCAACCAAGCAGTC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGTGCTCTGTGGGGTCTaGAGAGTCCTCAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGVLCGV*RVLRSQ
Trigger: TTGGGACCTGAGGACTCTTCAGACCCCACAGAGCAC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATGTCCATGCGGATTTTaGTGCGCACGTGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLCPCGF*CARGRG
Trigger: GCCCCGGCCACGTGCGCATCAAAATCCGCATGGACA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGTCAGTCTCTGGGGCTaGCCCAGCTGGTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPVSLWG*PSWFPV
Trigger: AACGGGGAACCAGCTGGGTCAGCCCCAGAGACTGAC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCAAGCAGAAAGCGCTTaGGAAGCAGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FLPTTSQRRGDWNCLSPKQAESA*EAGPGA
Trigger: AGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTGCTTG...CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACGTACATGGTGGGACTaGGCCGCAGAGCCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLRTWWD*AAEPGS
Trigger: ACTACCCGGCTCTGCGGCTCAGTCCCACCATGTACG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp GAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCGTACATGGTGGGACTaGGCCGCAGAGCCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: EGRGAPVSPWPRGSCRPPRTWWD*AAEPGS
Trigger: ACTACCCGGCTCTGCGGCTCAGTCCCACCATGTACG...AGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCTGAAGAAGGACACCTaGGCACCGTACATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHLKKDT*APYMVG
Trigger: TCCCACCATGTACGGTGCTCAGGTGTCCTTCTTCAG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp GGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCACTGAAGAAGGACACCTaGGCACCGTACATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GSCRPPPSAGVTGTACLPLKKDT*APYMVG
Trigger: TCCCACCATGTACGGTGCTCAGGTGTCCTTCTTCAG...TGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCGGCCTGTCAGGTTCTaGACCACTTCCCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRPVRF*TTSPEP
Trigger: CGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCACAACTCCTCCACTaGGCGGCCCAACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPQLLH*AAQLLA
Trigger: GGCCAAGAGTTGGGCCGCTCAGTGGAGGAGTTGTGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTGTGAGCCCAGGCTGTaGGGTTTTTCAGGACACGGT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHCEPRL*GFSGHG
Trigger: ACCGTGTCCTGAAAAACCTCACAGCCTGGGCTCACA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGAAGGCCAGAAAGATaGGCACCACGATGCATGCTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGRPER*APRCML
Trigger: CAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAACCGCCCATTCACCATaGTGGCCAGGCGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLTAHSP*WPGASR
Trigger: TCTGCTCGCGCCTGGCCATCATGGTGAATGGGCGGT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCGCGAATCTGCCCTTaGGATGTTGCGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLPRICP*DVAGCP
Trigger: TGGGCAGCCCGCAACATCTCAAGGGCAGATTCGCGG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCGCCCTGTTCCCACCCTaGCCTCCTTGCTTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: WPRGSCRPPPSAGVTGTAALFPP*PPCFLS
Trigger: ACTCAAAAAGCAAGGAGGTCAGGGTGGGAACAGGGC...GGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCTGGGCTTGGCCCAGTaGCAACCCCAGGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPLGLAQ*QPQGFR
Trigger: ACGGAATCCCTGGGGTTGGCACTGGGCCAAGCCCAG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGGTCTCTGCAGCAGTaGCCGAAGCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLGSLQQ*PKLHQA
Trigger: AGCCTGGTGGAGCTTCGGGCACTGCTGCAGAGACCC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCGCTCCACCAGGTCTTaGAGGTACACGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRSTRS*RYTKPP
Trigger: GGGCGGCTTCGTGTACCTGCAAGACCTGGTGGAGCG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACACCAGAACCAGCAGTaGGGCGCTGAGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLHQNQQ*GAEQEG
Trigger: CCCTTCCTGCTCAGCGCCGCACTGCTGGTTCTGGTG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCAGCCCCACATCCTaGAGCAGACGGTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPTSPTS*SRRSCS
Trigger: CGAGCAGGACCGTCTGCTGCAGGATGTGGGGCTGGT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCGAGTCTGCACACTCTaGTTGGAGACCAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRVCTL*LETSPT
Trigger: TGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGACTCG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGAGAGGTGGCGAGTCTaGACACTCTGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGERWRV*TLCLET
Trigger: GGTCTCCAAGCAGAGTGTGCAGACTCGCCACCTCTC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCAGACGGACAGCTTCCGTTaGATCCCACCAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSAGVTGTACLPSAQRHQTDSFR*IPPERW
Trigger: CCACCTCTCTGGTGGGATGCAACGGAAGCTGTCCGT...CTGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGCACAAGCGGCCACCTaGCACCACGGCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: CEEKEEGPLYHHGQEVLAAQAAT*HHGHTV
Trigger: GACCGTGTGGCCGTGGTGGCAGGTGGCCGCTTGTGC...GGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGAGTGCCGACTCTGCTaGCCTGGCTGCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGECRLC*PGCHSS
Trigger: AGAAGAATGGCAGCCAGGGCAGCAGAGTCGGCACTC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGGTCTTGACCGTCTAGGCCAGCAATaGCTGTGCATAGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HPLLSLQALAHQARVGLDRLGQQ*LCIGAA
Trigger: GGCAGCACCTATGCACAGGCATTGCTGGCCTAGACG...GTCAAGACCTACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp GTCAGACAGGTTCCGGCCTGTCAGGTTCTGAACCACTTCCCCAGAGCCGGTCACAACCTGTGGGAGCTATaGTGCACTGGGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VRQVPACQVLNHFPRAGHNLWEL*CTGGSS
Trigger: GGAGGAGCCCCCAGTGCAGCATAGCTCCCACAGGTT...GTGACCGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCGGAACCTGTCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGTGAGCACGGAGGATTaGGTTGCTGGCTCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGVSTED*VAGSVD
Trigger: GTCAACCGAGCCAGCAACGCAATCCTCCGTGCTCAC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCCATGAGCTGCAGGTaGTTGGCTCGGGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLPMSCR*LARVTR
Trigger: GCGAGTCACCCGAGCCAAGCACCTGCAGCTCATGGG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCCATGAGCTGCAGGTaGTTGGCTCGGGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPMSCR*LARVTR
Trigger: GCGAGTCACCCGAGCCAAGCACCTGCAGCTCATGGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTTGTCCCAGAGAAAGTTaGCAAGCCAGTAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CRPPPSAGVTGTACLPSACPRES*QASRGW
Trigger: CCACCCTCTACTGGCTTGGCAACTTTCTCTGGGACA...AGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGGCAGGGGCCACATATaGCCTCTGCTGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPGRGHI*PLLEGQ
Trigger: CTGGCCTTCCAGCAGAGGGCATATGTGGCCCCTGCC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCACCACATAGGCTGTaGTGGGCACGGAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHAPHRL*WARRRR
Trigger: TCTTCTTCTCCGTGCCCAGCACAGCCTATGTGGTGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAGGGGTGACTGGAACTaGCTGTCTCCCAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRGDWN*LSPKRS
Trigger: TGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACACAGCTGGCATCCTCTaGCCACGGTATACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHTAGIL*PRYTLV
Trigger: GACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATCCGCTGTAGGTGCCTaGAGGCCGGTCTGCGTACCA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLSAVGA*RPVCVP
Trigger: TGGTACGCAGACCGGCCTGCAGGCACCTACAGCGGA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGGCCGTCGCCAGCTTaGGTTTGTTCCCTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLGPSPA*VCSLRC
Trigger: ACAGCGGAGGGAACAAACGCAAGCTGGCGACGGCCC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTAGGCACTCTACCTTaGCCTTGCCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLGTLP*PCHSQG
Trigger: GCCCTGGGAATGGCAAGGGCAAGGTAGAGTGCCTAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGTGCAGCCCTCAGCGTaGCGATCAGCTTCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPVQPSA*RSASLG
Trigger: GCCTAGGGAAGCTGATCGCCACGCTGAGGGCTGCAC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCCGCGACATCCAGCATaGGTGGTTCCAGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGPRHPA*VVPVET
Trigger: AGTCTCCACTGGAACCACCCATGCTGGATGTCGCGG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCTGTGCAAGGGCTCCTaGGCTTGGCCCAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPLCKGS*AWPSAN
Trigger: GTTGGCACTGGGCCAAGCCCAGGAGCCCTTGCACAG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCTCAGGCTGCTGTCTaGCAGGGCGGATTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPAQAAV*QGGFWL
Trigger: GAGCCAGAATCCGCCCTGCCAGACAGCAGCCTGAGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAATTTTGATGCGCACGTaGCCGGGGCCCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLILMRT*PGPRSG
Trigger: CCCAGACCTGGGCCCCGGCCACGTGCGCATCAAAAT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGAGGCCACTCAAGATaGACAGGGTGGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRGHSR*TGWWSC
Trigger: GCAAGACCACCACCCTGTCCATCTTGAGTGGCCTCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACTGGAGCGGACGTCGTaGCCCAGGATGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLLERTS*PRMKAE
Trigger: CTCTGCCTTCATCCTGGGCCACGACGTCCGCTCCAG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp AGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGGGATGGCGGCCATGCTaGAGCGGACGTCGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSSVKRRKRGPCITMAKRGWRPC*SGRRGP
Trigger: TGGGCCACGACGTCCGCTCCAGCATGGCCGCCATCC...CCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCAGTCTGCCTCATCCAGGTaGTGGGTGGAGAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: PSAGVTGTACLPSAQRHQSASSR*WVERIS
Trigger: GCTGATCCTCTCCACCCACCACCTGGATGAGGCAGA...CTGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGAGATCTCCTCGAGGCTaGTGTCGGAGATCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: FLPTTSQRRGDWNCLSPKRSPRG*CRRSRS
Trigger: GCTACGGGATCTCCGACACCAGCCTCGAGGAGATCT...CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTCTGGCCCAGAGCCCTaGTCAGTCTCTGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSGPEP*SVSGAD
Trigger: GTCAGCCCCAGAGACTGACCAGGGCTCTGGGCCAGA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGAGCTATGCTGCACTaGGGGCTCCTCCAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLGAMLH*GLLQSC
Trigger: GCAGGACTGGAGGAGCCCCCAGTGCAGCATAGCTCC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp ACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCAGGGTCCAGTTGCCACTaGCCAAGACCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: TSQRRGDWNCLSPKRSKAGSSCH*PRPWPL
Trigger: AAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCC...TGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TGGGGATGGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCACTTCTGGGGATGGAGACTCTaGGGTCCAGTTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: WGWRLWGPVATGQDLGHFWGWRL*GPVATG
Trigger: GCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA...GAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCAAAGACCACACAGATaGAGACGAGGACGTCCACCG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHQRPHR*RRGRPP
Trigger: CGGTGGACGTCCTCGTCTCCATCTGTGTGGTCTTTG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp GGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCTGCCCTTGAGATGTTGCAAAGACCACACAGATaGAGACGAGGACGTCCACCG +
Preference number: 4 (lower is better)
Translates to: GHPQGQCVTRRESALEMLQRPHR*RRGRPP
Trigger: CGGTGGACGTCCTCGTCTCCATCTGTGTGGTCTTTG...CAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGGAGAGCAGGCAGGTTaGCAGGGGCCACATATGCCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPGEQAG*QGPHMP
Trigger: GGGCATATGTGGCCCCTGCCAACCTGCCTGCTCTCC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp AGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCCCACATAGGCTGTGCTaGGCACGGAGAAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGPCITMAKRFLPTTSQRPHRLC*ARRRRR
Trigger: CCTTCTTCTTCTCCGTGCCCAGCACAGCCTATGTGG...GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCCCCTGTATCACCATaGCCAAGAGGTTCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHAPVSP*PRGSCR
Trigger: TCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCTCACCCTGGGCTGTaGCAGGAGTTGGCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLPHPGL*QELASV
Trigger: CACCGAAGCCAACTCCTGCCACAGCCCAGGGTGAGG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACAGAAACACCACGGCTaGGTCCCCAACCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLQKHHG*VPNQRQ
Trigger: CTGGCGCTGGTTGGGGACCCAGCCGTGGTGTTTCTG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
3UTR CAA 72 bp CTCGCGGCCCGTCAGCAGCTCAAAGATGGCATCGGATaGAGGGCAGTATCCCATGCTGAGGTGCGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LAARQQLKDGIG*RAVSHAEVRST
Trigger: AGTGCTGCGCACCTCAGCATGGGATACTGCCCTCAATCCGATGCCATCTTTGAGCTGCTGACGGGCCGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGAACAGCCACCAGGATaGAGAAGAGGAAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGEQPPG*RRGREA
Trigger: GGCCTCTCTTCCTCTTCTTCATCCTGGTGGCTGTTC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCAGATCCCGTAGCCAGTaGGCCTCAGCTCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CEEKEEGPLYHHGQEVLARSRSQ*ASAPPA
Trigger: GGCTGGCGGAGCTGAGGCTCACTGGCTACGGGATCT...GGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CCTTGGCCACTTCAGCAGGAACTTCTGGTGCCGAGAACCTGTGGGAGCTATGCTGTCAGTCTCTGGGGCTaGCCCAGCTGGTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: PWPLQQELLVPRTCGSYAVSLWG*PSWFPV
Trigger: AACGGGGAACCAGCTGGGTCAGCCCCAGAGACTGAC...AGCATAGCTCCCACAGGTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCTGGGGCGTCCTCACTaGAGAAGGACACCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPLGRPH*RRTPEH
Trigger: GTGCTCAGGTGTCCTTCTTCAGTGAGGACGCCCCAG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCGGGTAGGTCTTaGCCAGGAAGTCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLGAGRS*PGSQTG
Trigger: ACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp ACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGTGTGAGCCCAGGCTGTaGGGTTTTTCAGGACACGGT +
Preference number: 4 (lower is better)
Translates to: TTSQRRGDWNCLSPKRSKCEPRL*GFSGHG
Trigger: ACCGTGTCCTGAAAAACCTCACAGCCTGGGCTCACA...CTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp ACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCAGGAAGGCCAGAAAGATaGGCACCACGATGCATGCTG +
Preference number: 4 (lower is better)
Translates to: TSQRRGDWNCLSPKRSKAGRPER*APRCML
Trigger: CAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCC...TGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR TCA 90 bp GCCATGGCCTGGTTCCGCACCATGTCAATGAGCCCCCGGCCCAAGCAGAAGTGGACCTCCTGCAGCTTCTaGTCAGAGAAGAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: AMAWFRTMSMSPRPKQKWTSCSF*SEKSSS
Trigger: GCTTGAGCTCTTCTCTGATCAGAAGCTGCAGGAGGT...CCACTTCTGCTTGGGCCGGGGGCTCATTGACATGGTGCGGAACCAGGCCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGGCAGTATCCCATGCTaGGGTGCGCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPGSIPC*GAQHWV
Trigger: AACCCAGTGCTGCGCACCTCAGCATGGGATACTGCC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAAGATGGCATCGGATTaGGGGCAGTATCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHKMASD*GQYPML
Trigger: CAGCATGGGATACTGCCCTCAATCCGATGCCATCTT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACATCGAGGAACTGGCTaGCGCGTTTGGGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLHRGTG*RVWGAA
Trigger: TGCAGCACCCCAAACGCGTCAGCCAGTTCCTCGATG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCCCAGGGATTCCGTaGGCAGCAGTGACGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPTPGIP*AAVTSA
Trigger: TGCTGACGTCACTGCTGCGCACGGAATCCCTGGGGT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCCTCCAACAAGCTGTaGAAGGGCTCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLASNKL*KGSWAW
Trigger: CCAAGCCCAGGAGCCCTTGCACAGCTTGTTGGAGGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCATCTGCAGGAGCCGCTaGAGCATGGCCACATTGGAA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGICRSR*SMATLE
Trigger: TTCCAATGTGGCCATGCTGCAGCGGCTCCTGCAGAT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCACCGCGAAGGCTaGCAAGAACAGGAAGACCAC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLGHREG*QEQEDH
Trigger: GTGGTCTTCCTGTTCTTGGCAGCCTTCGCGGTGGCC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp GGAGATGGCAGTTACCTTTATCAGCCTAAAGAGGTGGGCACTGCCACCCTCAGCTGCAGCAGACGGTCCTaGTCGGGGCCCACTACAGCG +
Preference number: 4 (lower is better)
Translates to: GDGSYLYQPKEVGTATLSCSRRS*SGPTTA
Trigger: CGCTGTAGTGGGCCCCGAGCAGGACCGTCTGCTGCA...GCTGAGGGTGGCAGTGCCCACCTCTTTAGGCTGATAAAGGTAACTGCCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGAGTGTGGCGAAGCTaGCGTCATGGGCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRVWRS*RHGHPC
Trigger: ACACGGGTGCCCATGACGGCAGCTTCGCCACACTCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAATGCCTGTGCATAGGTaGTGCCCGCAGCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLMPVHR*CPQLPS
Trigger: GGATGGCAGCTGCGGGCAGCACCTATGCACAGGCAT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACTGTGGGAGCTATGCTaGACTGGGGGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLLWELC*TGGSSS
Trigger: ACTGGAGGAGCCCCCAGTGCAGCATAGCTCCCACAG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAACCTGTGGGAGCTATaGTGCACTGGGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPNLWEL*CTGGSS
Trigger: GGAGGAGCCCCCAGTGCAGCATAGCTCCCACAGGTT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAGCAGGAACTTCTGGTaGCGAGAACCTGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSRNFW*REPVGA
Trigger: AGCTCCCACAGGTTCTCGGCACCAGAAGTTCCTGCT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCACCCTCAGACAGCTaGTCCTTGGTGAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGAPSDS*SLVRFK
Trigger: CTTGAACCTCACCAAGGAGCAGCTGTCTGAGGGTGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCGAGGAGGCCATCAGTaGACCCTCAGACAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRGGHQ*TLRQLL
Trigger: GAGCAGCTGTCTGAGGGTGCACTGATGGCCTCCTCG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTGTCCCAGAGAAAGTTaGCAAGCCAGTAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHCPRES*QASRGW
Trigger: CCACCCTCTACTGGCTTGGCAACTTTCTCTGGGACA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp AGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCTGTCCCAGAGAAAGTTaGCAAGCCAGTAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RGPCITMAKRFLPTTSQRCPRES*QASRGW
Trigger: CCACCCTCTACTGGCTTGGCAACTTTCTCTGGGACA...GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp TGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTGAGCACCACGATGCATaGTGGCACCAAGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: CRPPPSAGVTGTACLPSAEHHDA*WHQVVT
Trigger: TGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTC...AGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp GAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTTGGCCAAGAGGTTCTTaGCGACCACCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: EGRGAPVSPWPRGSCRPPWPRGS*RPPPSA
Trigger: TGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA...AGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp ACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGACAGCTGGCATCCTCTaGCCACGGTATACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TTSQRRGDWNCLSPKRSKTAGIL*PRYTLV
Trigger: GACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGT...CTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCATGTCCCCCGTCACCATaGGAAACGTGGACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SQRRGDWNCLSPKRSKASCPPSP*ETWTSS
Trigger: GGAAGACGTCCACGTTTCGCATGGTGACGGGGGACA...TGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTATCCCATGCTGAGGTaGGCAGCACTGGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPYPMLR*AALGSR
Trigger: CCGGGAACCCAGTGCTGCGCACCTCAGCATGGGATA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp GACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGTCCACTCCCACTCCTaGCTCCTTCTGCTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: DLIHPLLSLQALAHQARVVHSHS*LLLLFG
Trigger: ACCGAAGAGCAGAAGGAGGCAGGAGTGGGAGTGGAC...TACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACAGCGCAGGGTTCCTaGAAGCTCTTCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPTAQGS*KLFQGL
Trigger: GAGCCCCTGGAAGAGCTTCCAGGAACCCTGCGCTGT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCATGGGTGGTTCCAGTaGAGACTGCTTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHHGWFQ*RLLGWL
Trigger: CAACCAACCAAGCAGTCTCCACTGGAACCACCCATG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGACATCCAGCATGGGTaGTTCCAGTGGAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHDIQHG*FQWRLL
Trigger: AAGCAGTCTCCACTGGAACCACCCATGCTGGATGTC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGATGGACAGGGTGGTaGTCTTGCCGGCCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRWTGW*SCRPRC
Trigger: ACAACGGGGCCGGCAAGACCACCACCCTGTCCATCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCAGAGAGCCACCACTGGGTaGGAAGAGGCCACTCAAGAT +
Preference number: 4 (lower is better)
Translates to: PSAGVTGTACLPSAQRHQRATTG*EEATQD
Trigger: ATCTTGAGTGGCCTCTTCCCACCCAGTGGTGGCTCT...CTGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCTGCACACTCTGCTTaGAGACCAGCCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSAHSA*RPAPHP
Trigger: AGGATGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATGTCAGCCTTCTCATTaGTGGTCAGGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLCQPSH*WSGAGG
Trigger: CCCGCCTGCCCCTGACCACCAATGAGAAGGCTGACA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCTTCTTTTCCTGCCTaGTGTCCACACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSSFPA*CPHCPP
Trigger: TGGAGGGCAGTGTGGACACCAGGCAGGAAAAGAAGA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTCTTCTTTTCCTGCCTaGTGTCCACACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WPRGSCRPPPSAGVTGTASSFPA*CPHCPP
Trigger: TGGAGGGCAGTGTGGACACCAGGCAGGAAAAGAAGA...GGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCTCTCGGAAGAGTGTaGCGAAGCTGCCGTCATGGG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPALGRV*RSCRHG
Trigger: CCCATGACGGCAGCTTCGCCACACTCTTCCGAGAGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTTCAGCAGGAACTTCTaGTGCCGAGAACCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHFSRNF*CREPVG
Trigger: TCCCACAGGTTCTCGGCACCAGAAGTTCCTGCTGAA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCACTGGCCAAGACCTTaGCCACTTCAGCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHHWPRP*PLQQEL
Trigger: AAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TGGGGATGGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCACTTCGGGTCCAGTTGCCACTaGCCAAGACCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: WGWRLWGPVATGQDLGHFGSSCH*PRPWPL
Trigger: AAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCC...GAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATGGGGATGGAGACTCTaGGGTCCAGTTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLWGWRL*GPVATG
Trigger: GCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCTACACTGGCAGGCTaGGGATGGAGACTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLATLAG*GWRLWG
Trigger: ACCCCAGAGTCTCCATCCCCAGCCTGCCAGTGTAGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACAGCGCAGGGGTGACTaGAACTGCCTGTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLQRRGD*NCLSPK
Trigger: CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCAGCGCAGGGGTGACTaGAACTGCCTGTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPQRRGD*NCLSPK
Trigger: CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp ACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCAGCCCCTGTATCACCATaGCCAAGAGGTTCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: TSQRRGDWNCLSPKRSKAAPVSP*PRGSCR
Trigger: TCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC...TGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR CCA 90 bp TGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGCCCTGGGTGGCTCCTTaGACCACCCGCTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: CSSSVKRRKRGPCITMAKPWVAP*TTRSRS
Trigger: TGAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGG...CTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAACCAACACATCCCCCTaGGTGGCTCCTTGGACCACC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLTNTSP*VAPWTT
Trigger: GGTGGTCCAAGGAGCCACCCAGGGGGATGTGTTGGT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCCCACGGTATACCTTaGTCAAGTTCCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHAHGIP*SSSSAP
Trigger: TGGTGCTGAGGAACTTGACCAAGGTATACCGTGGGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCCTCCAGCATCGTCTaGCTCACGGAAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSSSIV*LTEKSS
Trigger: GGAGGACTTTTCCGTGAGCCAGACGATGCTGGAGGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
3UTR CAA 72 bp GGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTaGGCCACTTCAGCAGGAACTTCTGGTGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: GDSGVQLPLAKT*ATSAGTSGAEN
Trigger: GTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTGTTCACATTACAGATaGGACCCTGGAGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGCSHYR*DPGARA
Trigger: TGCCCTGGCTCCAGGGTCTCATCTGTAATGTGAACA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCAAGCAGAAAGCGCTTaGGAAGCAGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPQAESA*EAGPGA
Trigger: AGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTGCTTG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp CTTCGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCCTGGGGCGTCCTCACTaGAGAAGGACACCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRCCSSSVKRRKRGPCITLGRPH*RRTPEH
Trigger: GTGCTCAGGTGTCCTTCTTCAGTGAGGACGCCCCAG...GGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGGCGCGGGTAGGTCTTaGCCAGGAAGTCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMGAGRS*PGSQTG
Trigger: ACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCC...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCGTTGCTGGCTCGGTTaGCAAAGGCCACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRCWLG*QRPPWS
Trigger: ACTCCATGGTGGCCTTTGTCAACCGAGCCAGCAACG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCTCCTGCAGCTTCTaGTCAGAGAAGAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGTSCSF*SEKSSS
Trigger: GCTTGAGCTCTTCTCTGATCAGAAGCTGCAGGAGGT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCTGCAGCAGTAGTGTaGAGAGAAGGAAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLAAAVV*REGRGA
Trigger: GGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCATGCTATGGGAGGTaGGCATCACTGAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPCYGR*ASLNGP
Trigger: AGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTCGCCCGGTGTCAGCTaGGGAAAGCAGGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSPGVS*GKQVLF
Trigger: GAACAACACCTGCTTTCCGCAGCTGACACCGGGCGA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCTTCATCCTGCATCTaGAGGAGCCGCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPSSCI*RSRCSM
Trigger: CATGCTGCAGCGGCTCCTGCAGATGCAGGATGAAGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGTCTGGGGTTGGGTaGTCTGTGGGGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRSGVG*SVGSEE
Trigger: CTCTTCAGACCCCACAGAGCACCCAACCCCAGACCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACGGACAGCTTCCGTTaGATCCCACCAGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPTDSFR*IPPERW
Trigger: CCACCTCTCTGGTGGGATGCAACGGAAGCTGTCCGT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCCTGGTGTCCACACTaGCCTCCATGTCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPAWCPH*PPCQCQ
Trigger: CTGACACTGACATGGAGGGCAGTGTGGACACCAGGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp AAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCGAGGAGTGCCGACTCTaGTGCCCTGGCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: KRRKRGPCITMAKRFLPTEECRL*CPGCHS
Trigger: AGAATGGCAGCCAGGGCAGCAGAGTCGGCACTCCTC...GGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCAAGAGTGTGGCGAAGCTaGCGTCATGGGCACCCGTGT +
Preference number: 4 (lower is better)
Translates to: REGRGAPVSPWPRGSCRPRVWRS*RHGHPC
Trigger: ACACGGGTGCCCATGACGGCAGCTTCGCCACACTCT...TGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCGTCTAGGCCAGCAATaGCTGTGCATAGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRLGQQ*LCIGAA
Trigger: GGCAGCACCTATGCACAGGCATTGCTGGCCTAGACG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TGGGGATGGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTTGGCCACTTCAGCAGGAACTTCTGGTaGCGAGAACCTGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WGWRLWGPVATGQDLGHFSRNFW*REPVGA
Trigger: AGCTCCCACAGGTTCTCGGCACCAGAAGTTCCTGCT...GAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAACTCTGGGGTCCAGTTaGCACTGGCCAAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLTLGSS*HWPRPW
Trigger: CCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCCACATATGCCCTCTaGTGGAAGGCCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGATYAL*WKARKM
Trigger: CATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGGGTGACTGGAACTaGCTGTCTCCCAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRGDWN*LSPKRS
Trigger: TGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGTTGGCTTCGGTGCTaGAGCAGTAGTGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSWLRC*SSSVKR
Trigger: TCTCTTCACACTACTGCTGCAGCACCGAAGCCAACT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTGTCCCCCGTCACCATaGGAAACGTGGACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPCPPSP*ETWTSS
Trigger: GGAAGACGTCCACGTTTCGCATGGTGACGGGGGACA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGTCCGCTGTAGGTGCCTaGAGGCCGGTCTGCGTACCA +
Preference number: 4 (lower is better)
Translates to: CSSSVKRRKRGPCITMAKSAVGA*RPVCVP
Trigger: TGGTACGCAGACCGGCCTGCAGGCACCTACAGCGGA...CTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGTCCACTCCCACTCCTaGCTCCTTCTGCTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLVHSHS*LLLLFG
Trigger: ACCGAAGAGCAGAAGGAGGCAGGAGTGGGAGTGGAC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACTAGGCACTCTACCTTaGCCTTGCCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLLGTLP*PCHSQG
Trigger: GCCCTGGGAATGGCAAGGGCAAGGTAGAGTGCCTAG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp AGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAGCAGGAACTTCTGGTaGCGAGAACCTGCAGACAAT +
Preference number: 4 (lower is better)
Translates to: RFLPTTSQRRGDWNCLSPSRNFW*REPADN
Trigger: ATTGTCTGCAGGTTCTCGGCACCAGAAGTTCCTGCT...GGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGGCTTGTTTGGGAAGTaGCATTCATGGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGGLFGK*HSWCSR
Trigger: CCTGGAGCACCATGAATGCCACTTCCCAAACAAGCC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTGGAGACTGCTTGGTTaGTTGAGGCTGGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPWRLLG*LRLGRA
Trigger: AGCACGGCCCAGCCTCAACCAACCAAGCAGTCTCCA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAAGGTCCGGTTCACCTaGGCCATGAGCTTCCGGGTA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLKVRFT*AMSFRV
Trigger: TACCCGGAAGCTCATGGCCCAGGTGAACCGGACCTT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CCCCCGTCACCATGCGAAACGTGGACGTCTTCCCTGCTCCATTCACACCCAGCATCTGCACACTCTGCTTaGAGACCAGCCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: PPSPCETWTSSLLHSHPASAHSA*RPAPHP
Trigger: AGGATGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGA...TGCTGGGTGTGAATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGACGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTCTGCCTCATCCAGGTaGTGGGTGGAGAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSASSR*WVERIS
Trigger: GCTGATCCTCTCCACCCACCACCTGGATGAGGCAGA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp AGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCAGCACCAGCTCGTGTaGCAGCTCCTCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: SVKRRKRGPCITMAKRFLQHQLV*QLLHQP
Trigger: CGGCTGGTGGAGGAGCTGCCACACGAGCTGGTGCTG...CAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGGGAGAGCAGGCAGGTTaGCAGGGGCCACATATGCCC +
Preference number: 4 (lower is better)
Translates to: CSSSVKRRKRGPCITMAKGEQAG*QGPHMP
Trigger: GGGCATATGTGGCCCCTGCCAACCTGCCTGCTCTCC...CTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR CCA 90 bp TGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCGAAGAAGAAGGAGGCTaGGTACATGAGCGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: WPRGSCRPPPSAGVTGTAEEEGG*VHERCD
Trigger: ATCACACCGCTCATGTACCCAGCCTCCTTCTTCTTC...GGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCCCACGGTATACCTTaGTCAAGTTCCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGAHGIP*SSSSAP
Trigger: TGGTGCTGAGGAACTTGACCAAGGTATACCGTGGGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGGCCCACGGTATACCTTaGTCAAGTTCCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: FLPTTSQRRGDWNCLSPKAHGIP*SSSSAP
Trigger: TGGTGCTGAGGAACTTGACCAAGGTATACCGTGGGC...CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCAAGCGGTCAACAGCTaGCATCCTCTGCCCACGGTA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPQAVNS*HPLPTV
Trigger: TACCGTGGGCAGAGGATGCCAGCTGTTGACCGCTTG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCACCATGCGAAACGTaGACGTCTTCCCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSPCET*TSSLLH
Trigger: ATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCAGCAGCTCAAAGATaGCATCGGATTGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSAAQR*HRIEGS
Trigger: ACTGCCCTCAATCCGATGCCATCTTTGAGCTGCTGA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCACTCCTCCATGCTATaGGAGGTGAGCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHHSSML*EVSITE
Trigger: TTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp GCTTCACACTCCTCCATGCTATGGGAGGTGAGCATCACTGAACGGCCCTCCCGCTCCTCCAGCATCGTCTaGCTCACGGAAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASHSSMLWEVSITERPSRSSSIV*LTEKSS
Trigger: GGAGGACTTTTCCGTGAGCCAGACGATGCTGGAGGA...GCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTGTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCCTCGTCCTTCCCCTaGTCCTTGGAGAAGTACAAG +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSSSFP*SLEKYK
Trigger: CTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGTCCTCGTCCTTCCCCTaGTCCTTGGAGAAGTACAAG +
Preference number: 4 (lower is better)
Translates to: FLPTTSQRRGDWNCLSPKSSSFP*SLEKYK
Trigger: CTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGA...CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTGACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGAGAACCTGCAGACAATaGGCTGTGGGAGCTATGCTG +
Preference number: 4 (lower is better)
Translates to: LTSFTHFLVFRPWRTRRGRTCRQ*AVGAML
Trigger: CAGCATAGCTCCCACAGCCCATTGTCTGCAGGTTCT...CCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CCTTGGCCACTTCAGCAGGAACTTCTGGTGCCGAGAACCTGTGGGAGCTATGCTCAAGCAGAAAGCGCTTaGGAAGCAGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PWPLQQELLVPRTCGSYAQAESA*EAGPGA
Trigger: AGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTGCTTG...AGCATAGCTCCCACAGGTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGGAAGGCCAGAAAGATaGGCACCACGATGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPGRPER*APRCML
Trigger: CAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp TGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCGCTGCAGCAGTAGTGTaGAGAGAAGGAAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CCSSSVKRRKRGPCITMAAAAVV*REGRGA
Trigger: GGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGC...GGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR TCA 90 bp GGGCTACATCCTCGTCCTCCTCTCCCAGGAGTGGCAGAGACCTCACCCTGGGCTGACCTCCTTGCTTTTTaGGTAGGAAGGCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: GLHPRPPLPGVAETSPWADLLAF*VGRHKV
Trigger: GACTTTGTGCCTTCCTACTCAAAAAGCAAGGAGGTC...AGCCCAGGGTGAGGTCTCTGCCACTCCTGGGAGAGGAGGACGAGGATGTAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCAACTCTGGGGTCCAGTTaGCACTGGCCAAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: REGRGAPVSPWPRGSCRPTLGSS*HWPRPW
Trigger: CCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGT...TGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAAGGCCACCATGGAGTaGCAGCCTTTGTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGKATME*QPLLLN
Trigger: GTTCAACAACAAAGGCTGGCACTCCATGGTGGCCTT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp CCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCAGAAGGCCACCATGGAGTaGCAGCCTTTGTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: PSAGVTGTACLPSAQRHQKATME*QPLLLN
Trigger: GTTCAACAACAAAGGCTGGCACTCCATGGTGGCCTT...CTGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp GAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTGCACCCTCAGACAGCTaGTCCTTGGTGAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: EGRGAPVSPWPRGSCRPPAPSDS*SLVRFK
Trigger: CTTGAACCTCACCAAGGAGCAGCTGTCTGAGGGTGC...AGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGAGCACCACGATGCATaGTGGCACCAAGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGEHHDA*WHQVVT
Trigger: TGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp ACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCAAGTTGGCTTCGGTGCTaGAGCAGTAGTGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TSQRRGDWNCLSPKRSKASWLRC*SSSVKR
Trigger: TCTCTTCACACTACTGCTGCAGCACCGAAGCCAACT...TGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAACAGCTGGCATCCTCTaGCCACGGTATACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLTAGIL*PRYTLV
Trigger: GACCAAGGTATACCGTGGGCAGAGGATGCCAGCTGT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGCTAGGCACTCTACCTTaGCCTTGCCATTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMLGTLP*PCHSQG
Trigger: GCCCTGGGAATGGCAAGGGCAAGGTAGAGTGCCTAG...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCATCAGATCCGGCTCACCTCCTaGAGCTTCCATACAGTAGTA +
Preference number: 4 (lower is better)
Translates to: PSAGVTGTACLPSAQRHQIRLTS*SFHTVV
Trigger: TACTACTGTATGGAAGCTGCAGGAGGTGAGCCGGAT...CTGATGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529442.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGAGCCACCACTGGGTaGGAAGAGGCCACTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPRATTG*EEATQD
Trigger: ATCTTGAGTGGCCTCTTCCCACCCAGTGGTGGCTCT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp GACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTATTCAGCAGGAACTTCTaGTGCCGAGAACCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: DLIHPLLSLQALAHQARVFSRNF*CREPVG
Trigger: TCCCACAGGTTCTCGGCACCAGAAGTTCCTGCTGAA...TACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530092.2
CDS-3UTR CCA 90 bp ATCCTCTGCCCACGGTATACCTTGGTCAAGTTCCTCAGCACCAACACATCCCCCTGGGGATGGAGACTCTaGGGTCCAGTTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: ILCPRYTLVKFLSTNTSPWGWRL*GPVATG
Trigger: GCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCA...GGGGGATGTGTTGGTGCTGAGGAACTTGACCAAGGTATACCGTGGGCAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp GAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCACCACGATGCATGCTaGCACCAAGTAGTTACACAT +
Preference number: 4 (lower is better)
Translates to: EGPLYHHGQEVLADHLPAHHDAC*HQVVTH
Trigger: ATGTGTAACTACTTGGTGCCAGCATGCATCGTGGTG...CGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529442.7
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCACATAGGCTGTGCTaGGCACGGAGAAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLPHRLC*ARRRRR
Trigger: CCTTCTTCTTCTCCGTGCCCAGCACAGCCTATGTGG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCCCCTGTATCACCATaGCCAAGAGGTTCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLAPVSP*PRGSCR
Trigger: TCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CCTCAAGACTTTACCCAGGCCATCTTGGACAAGCCCCTGCCTACAAGGGGCCAGGCCCCTGTATCACCATaGCCAAGAGGTTCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: PQDFTQAILDKPLPTRGQAPVSP*PRGSCR
Trigger: TCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC...CTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCACCAACACATCCCCCTaGGTGGCTCCTTGGACCACC +
Preference number: 4 (lower is better)
Translates to: CEEKEEGPLYHHGQEVLATNTSP*VAPWTT
Trigger: GGTGGTCCAAGGAGCCACCCAGGGGGATGTGTTGGT...GGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp AGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACAAGCGGTCAACAGCTaGCATCCTCTGCCCACGGTA +
Preference number: 4 (lower is better)
Translates to: REGRGAPVSPWPRGSCRPQAVNS*HPLPTV
Trigger: TACCGTGGGCAGAGGATGCCAGCTGTTGACCGCTTG...TGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATCCTCCAGCATCGTCTaGCTCACGGAAAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLSSSIV*LTEKSS
Trigger: GGAGGACTTTTCCGTGAGCCAGACGATGCTGGAGGA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCAGACAATGGGCTGTaGGAGCTATGCTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMADNGL*ELCCTG
Trigger: CCCAGTGCAGCATAGCTCCCACAGCCCATTGTCTGC...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp GCTTCACACTCCTCCATGCTATGGGAGGTGAGCATCACTGAACGGCCCTCCCGCTTCAGCAGGAACTTCTaGTGCCGAGAACCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ASHSSMLWEVSITERPSRFSRNF*CREPAD
Trigger: GTCTGCAGGTTCTCGGCACCAGAAGTTCCTGCTGAA...GCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGATCAGCCTAAAGAGGTaGGCACTGCCACCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMISLKR*ALPPSA
Trigger: GGCTGAGGGTGGCAGTGCCCACCTCTTTAGGCTGAT...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp ATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGCACCACGATGCATGCTaGCACCAAGTAGTTACACTG +
Preference number: 4 (lower is better)
Translates to: ITMAKRFLPTTSQRRGDWHHDAC*HQVVTL
Trigger: CAGTGTAACTACTTGGTGCCAGCATGCATCGTGGTG...CCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAACCTCCTGCAGCTTCTaGTCAGAGAAGAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLTSCSF*SEKSSS
Trigger: GCTTGAGCTCTTCTCTGATCAGAAGCTGCAGGAGGT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR TCA 90 bp GAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTAAGATGGCATCGGATTaGGGGCAGTATCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: EGRGAPVSPWPRGSCRPPKMASD*GQYPML
Trigger: CAGCATGGGATACTGCCCTCAATCCGATGCCATCTT...AGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAGATGGCATCGGATTaGGGGCAGTATCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPKMASD*GQYPML
Trigger: CAGCATGGGATACTGCCCTCAATCCGATGCCATCTT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp GGAGATGGCAGTTACCTTTATCAGCCTAAAGAGGTGGGCACTGCCACCCTCAGCCGAGTCTGCACACTCTaGTTGGAGACCAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GDGSYLYQPKEVGTATLSRVCTL*LETSPT
Trigger: TGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGACTCG...GCTGAGGGTGGCAGTGCCCACCTCTTTAGGCTGATAAAGGTAACTGCCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGGAGAGGTGGCGAGTCTaGACACTCTGCTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SSSVKRRKRGPCITMAKRERWRV*TLCLET
Trigger: GGTCTCCAAGCAGAGTGTGCAGACTCGCCACCTCTC...CCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCATTCTTCTTTTCCTaGCTGGTGTCCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPFFFS*LVSTLP
Trigger: GGGCAGTGTGGACACCAGGCAGGAAAAGAAGAATGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR GCA 90 bp ATCCTCTGCCCACGGTATACCTTGGTCAAGTTCCTCAGCACCAACACATCCCCCGTGAGCACGGAGGATTaGGTTGCTGGCTCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: ILCPRYTLVKFLSTNTSPVSTED*VAGSVD
Trigger: GTCAACCGAGCCAGCAACGCAATCCTCCGTGCTCAC...GGGGGATGTGTTGGTGCTGAGGAACTTGACCAAGGTATACCGTGGGCAGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGCCACATATGCCCTCTaGTGGAAGGCCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPATYAL*WKARKM
Trigger: CATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp AGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGTGGCCAAGAGGTTCTTaGCGACCACCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SVKRRKRGPCITMAKRFLWPRGS*RPPPSA
Trigger: TGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCA...CAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAGGAGTTGGCTTCGGTaGTGCAGCAGTAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLRSWLR*CSSSVK
Trigger: CTTCACACTACTGCTGCAGCACCGAAGCCAACTCCT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CCTCAAGACTTTACCCAGGCCATCTTGGACAAGCCCCTGCCTACAAGGGGCCAGAGGAGTTGGCTTCGGTaGTGCAGCAGTAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PQDFTQAILDKPLPTRGQRSWLR*CSSSVK
Trigger: CTTCACACTACTGCTGCAGCACCGAAGCCAACTCCT...CTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp AGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGGCTCTCGGAAGAGTGTaGCGAAGCTGCCGTCATGGG +
Preference number: 4 (lower is better)
Translates to: SVKRRKRGPCITMAKRFLALGRV*RSCRHG
Trigger: CCCATGACGGCAGCTTCGCCACACTCTTCCGAGAGC...CAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGTGAGGTTCAAGGGGTaGTTGAGTGTGGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPVRFKG*LSVVML
Trigger: CAGCATCACCACACTCAACCACCCCTTGAACCTCAC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCACCACGATGCATGCTaGCACCAAGTAGTTACACAT +
Preference number: 4 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGHHDAC*HQVVTH
Trigger: ATGTGTAACTACTTGGTGCCAGCATGCATCGTGGTG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATCACCATGCGAAACGTaGACGTCTTCCCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLSPCET*TSSLLH
Trigger: ATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATCCTCGTCCTTCCCCTaGTCCTTGGAGAAGTACAAG +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLSSSFP*SLEKYK
Trigger: CTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp GCCATGGCCTGGTTCCGCACCATGTCAATGAGCCCCCGGCCCAAGCAGAAGTGGACACTGCATTGGAGATaGCAGTTACCTTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: AMAWFRTMSMSPRPKQKWTLHWR*QLPLSA
Trigger: GGCTGATAAAGGTAACTGCCATCTCCAATGCAGTGT...CCACTTCTGCTTGGGCCGGGGGCTCATTGACATGGTGCGGAACCAGGCCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGTCTCCGGCGATACATaGAATTCTTCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLVSGDT*NSSRAA
Trigger: TGCTGCTCTGGAAGAATTTCATGTATCGCCGGAGAC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTCTTATTGGTCCTCGTaGCCACGTCAATGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSYWSS*PRQCPC
Trigger: GCATGGACATTGACGTGGTCACGAGGACCAATAAGA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR TCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCCGGCCTGTCAGGTTCTaGACCACTTCCCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSRPVRF*TTSPEP
Trigger: CGGCTCTGGGGAAGTGGTTCAGAACCTGACAGGCCG...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp TTCGGTGTCCTCGTCCTTCCCCTGGTCCTTGGAGAAGTACAAGAATACCTCCTCGCTGCAGCAGTAGTGTaGAGAGAAGGAAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FGVLVLPLVLGEVQEYLLAAAVV*REGRGA
Trigger: GGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGC...GAGGAGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGACGAGGACACCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGCCATTCTTCTTTTCCTaGCTGGTGTCCACACTGCCC +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMPFFFS*LVSTLP
Trigger: GGGCAGTGTGGACACCAGGCAGGAAAAGAAGAATGG...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGAGCACCACGATGCATaGTGGCACCAAGTAGTTACA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLEHHDA*WHQVVT
Trigger: TGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCACATATGCCCTCTaGTGGAAGGCCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMATYAL*WKARKM
Trigger: CATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGC...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCGGCAGGGGCCACATATaGCCTCTGCTGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSGRGHI*PLLEGQ
Trigger: CTGGCCTTCCAGCAGAGGGCATATGTGGCCCCTGCC...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGTTGGCTTCGGTGCTaGAGCAGTAGTGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSWLRC*SSSVKR
Trigger: TCTCTTCACACTACTGCTGCAGCACCGAAGCCAACT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAAAAGGAAAATTCCATaGTTCAGGGATCCCGTACTG +
Preference number: 4 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHKRKIP*FRDPVL
Trigger: CAGTACGGGATCCCTGAACCATGGAATTTTCCTTTT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCCAGCCTTCTCATTGGTaGTCAGGGGCAGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSQPSHW*SGAGGP
Trigger: AGGCCCGCCTGCCCCTGACCACCAATGAGAAGGCTG...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCGTGAGGTTCAAGGGGTaGTTGAGTGTGGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: CCSSSVKRRKRGPCITMAVRFKG*LSVVML
Trigger: CAGCATCACCACACTCAACCACCCCTTGAACCTCAC...GGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCGGAGAGCAGGCAGGTTaGCAGGGGCCACATATGCCC +
Preference number: 4 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSGEQAG*QGPHMP
Trigger: GGGCATATGTGGCCCCTGCCAACCTGCCTGCTCTCC...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGAAGAAGAAGGAGGCTaGGTACATGAGCGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPEEEGG*VHERCD
Trigger: ATCACACCGCTCATGTACCCAGCCTCCTTCTTCTTC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCCTCCTCTCCCAGGAGTaGCAGAGACCTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSLLSQE*QRPHPG
Trigger: CCCAGGGTGAGGTCTCTGCCACTCCTGGGAGAGGAG...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATCAGCAGCTCAAAGATaGCATCGGATTGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLSAAQR*HRIEGS
Trigger: ACTGCCCTCAATCCGATGCCATCTTTGAGCTGCTGA...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACACTCCTCCATGCTATaGGAGGTGAGCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLHSSML*EVSITE
Trigger: TTCAGTGATGCTCACCTCCCATAGCATGGAGGAGTG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGTTACCCAGGCCATCTTaGACAAGCCCCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: RCCSSSVKRRKRGPCITMLPRPS*TSPCLQ
Trigger: TTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAA...CATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp CTCACGGAAAAGTCCTCCACGCCGTGCTCTGCGCCGTGCACCGCCAGCTCTCCAGTAGTTACACTGCATTaGAGATGGCAGTTACCTTTA +
Preference number: 4 (lower is better)
Translates to: LTEKSSTPCSAPCTASSPVVTLH*RWQLPL
Trigger: TAAAGGTAACTGCCATCTCCAATGCAGTGTAACTAC...TGGAGAGCTGGCGGTGCACGGCGCAGAGCACGGCGTGGAGGACTTTTCCGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR TCA 90 bp AGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGGGAAGGCCAGAAAGATaGGCACCACGATGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SVKRRKRGPCITMAKRFLGRPER*APRCML
Trigger: CAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCC...CAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR GCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCCTGTGGGAGCTATGCTaGACTGGGGGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSLWELC*TGGSSS
Trigger: ACTGGAGGAGCCCCCAGTGCAGCATAGCTCCCACAG...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp ATCCTCTGCCCACGGTATACCTTGGTCAAGTTCCTCAGCACCAACACATCCCCCGCCACATATGCCCTCTaGTGGAAGGCCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: ILCPRYTLVKFLSTNTSPATYAL*WKARKM
Trigger: CATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGC...GGGGGATGTGTTGGTGCTGAGGAACTTGACCAAGGTATACCGTGGGCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp AGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGGCACCACATAGGCTGTaGTGGGCACGGAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SVKRRKRGPCITMAKRFLAPHRL*WARRRR
Trigger: TCTTCTTCTCCGTGCCCAGCACAGCCTATGTGGTGC...CAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR GCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGCACCACATAGGCTGTaGCATACAGTAGTAGCAACA +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLAPHRL*HTVVAT
Trigger: TGTTGCTACTACTGTATGGCACAGCCTATGTGGTGC...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACACCACGATGCATGCTaGCACCAAGTAGTTACACAT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLHHDAC*HQVVTH
Trigger: ATGTGTAACTACTTGGTGCCAGCATGCATCGTGGTG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTCGGTGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCTCAGCAGCTCAAAGATaGCATCGGATTGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LRCCSSSVKRRKRGPCITSAAQR*HRIEGS
Trigger: ACTGCCCTCAATCCGATGCCATCTTTGAGCTGCTGA...GGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCACCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCTTCCCCTGGTCCTTaGAGAAGTACAAGAATACCT +
Preference number: 4 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPSPGP*RSTRIP
Trigger: AGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CCA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTACCTTCCCCTGGTCCTTaGAGAAGTACAAGAATACCT +
Preference number: 4 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLPSPGP*RSTRIP
Trigger: AGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGG...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR GCA 90 bp TTGGAGAAGTACAAGAATACCTCCTCCAGCATCGTCTGGCTCACGGAAAAGTCCAGGGGTGACTGGAACTaGCTGTCTCCCAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LEKYKNTSSSIVWLTEKSRGDWN*LSPKRS
Trigger: TGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCT...GGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTCTTGTACTTCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CCA 90 bp TGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCCCTTCCCCTGGTCCTTaGAGAAGTACAAGAATACCT +
Preference number: 4 (lower is better)
Translates to: CEEKEEGPLYHHGQEVLAPSPGP*RSTRIP
Trigger: AGGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGG...GGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435683.7
3UTR CAA 72 bp CCACGATGCATGCTGGCACCAAGTAGTTACACTGCATaGGAGATGGCAGTTACCTTTATCAGCCTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PRCMLAPSSYTA*EMAVTFISLKR
Trigger: CCTCTTTAGGCTGATAAAGGTAACTGCCATCTCCAATGCAGTGTAACTACTTGGTGCCAGCATGCATCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS GCA 90 bp GCGCCGGGGCACGCCCCTGCCTCTGCACGCTGCTATTGGGCGACCTaGCCGTCACTCACTGGCCTGCTCCGTCGGAGCTGCGCGGGCCAA +
Preference number: 5 (lower is better)
Translates to: APGHAPASARCYWAT*PSLTGLLRRSCAGQ
Trigger: TTGGCCCGCGCAGCTCCGACGGAGCAGGCCAGTGAGTGACGGGCAGGTCGCCCAATAGCAGCGTGCAGAGGCAGGGGCGTGCCCCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS GCA 90 bp CCCGCGCAGGTAGCAGCGCCGGGGCACGCCCCTGCCTCTGCACGCTaGTATTGGGCGACCTGCCCGTCACTCACTGGCCTGCTCCGTCGG +
Preference number: 5 (lower is better)
Translates to: PAQVAAPGHAPASAR*YWATCPSLTGLLRR
Trigger: CCGACGGAGCAGGCCAGTGAGTGACGGGCAGGTCGCCCAATAGCAGCGTGCAGAGGCAGGGGCGTGCCCCGGCGCTGCTACCTGCGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS GCA 90 bp CCCAGGGAACTCGGCCGCCACGAAGGCCGCTGCCGGCTGGGACCTTaGGGCGGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCA +
Preference number: 5 (lower is better)
Translates to: PRELGRHEGRCRLGP*GGHPQGQCVTRRES
Trigger: TGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCAGCCGGCAGCGGCCTTCGTGGCGGCCGAGTTCCCTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524383.1
CDS GCA 90 bp GTAGAGGCCGGCCCGGGGGTTGGCGCCGCTGAGCACGCGGACGGCTaGACGCTCCACCAGGTCTTGCAGGTACACGAAGCCGCCCCACAC +
Preference number: 5 (lower is better)
Translates to: VEAGPGVGAAEHADG*TLHQVLQVHEAAPH
Trigger: GTGTGGGGCGGCTTCGTGTACCTGCAAGACCTGGTGGAGCGTGCAGCCGTCCGCGTGCTCAGCGGCGCCAACCCCCGGGCCGGCCTCTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000533574.1
CDS GCA 90 bp GAGCTCCGTGAGGCCGGGGCCACCTGTGCCTGGCGCCACACTGCCTaGTTCCCCCGGCCTGGGCCACCCTTCTGGTGTGGACATCTCCCC +
Preference number: 5 (lower is better)
Translates to: ELREAGATCAWRHTA*FPRPGPPFWCGHLP
Trigger: GGGGAGATGTCCACACCAGAAGGGTGGCCCAGGCCGGGGGAAGCAGGCAGTGTGGCGCCAGGCACAGGTGGCCCCGGCCTCACGGAGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 90 bp TGGGCCAGGCTGAAGACGTCTGCCGTAGGCCGGGTGCCCACGTTGTaGCACTGCGCGCCCTCGCCCTGCTCCTCCAGCAGAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: WARLKTSAVGRVPTL*HCAPSPCSSSRARL
Trigger: GAGCCTGGCTCTGCTGGAGGAGCAGGGCGAGGGCGCGCAGTGGCACAACGTGGGCACCCGGCCTACGGCAGACGTCTTCAGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 90 bp GAGCTTGCCCGCGCAGGTAGCAGCGCCGGGGCACGCCCCTGCCTCTaGACGCTGCTATTGGGCGACCTGCCCGTCACTCACTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ELARAGSSAGARPCL*TLLLGDLPVTHWPA
Trigger: AGCAGGCCAGTGAGTGACGGGCAGGTCGCCCAATAGCAGCGTGCAGAGGCAGGGGCGTGCCCCGGCGCTGCTACCTGCGCGGGCAAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS GCA 90 bp TGCGCTGAGCTTGCCCGCGCAGGTAGCAGCGCCGGGGCACGCCCCTaGCTCTGCACGCTGCTATTGGGCGACCTGCCCGTCACTCACTGG +
Preference number: 5 (lower is better)
Translates to: CAELARAGSSAGARP*LCTLLLGDLPVTHW
Trigger: CCAGTGAGTGACGGGCAGGTCGCCCAATAGCAGCGTGCAGAGGCAGGGGCGTGCCCCGGCGCTGCTACCTGCGCGGGCAAGCTCAGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS GCA 90 bp AGAGGGCAGGAGGCGGGGTTCCGGCCGGCACTGCAGCCCCGAGTTTaGAGGCCGGCCGCACCCACTGCCTCTGGCTCACAGGGAGTCGTT +
Preference number: 5 (lower is better)
Translates to: RGQEAGFRPALQPRV*RPAAPTASGSQGVV
Trigger: AACGACTCCCTGTGAGCCAGAGGCAGTGGGTGCGGCCGGCCTGCAAACTCGGGGCTGCAGTGCCGGCCGGAACCCCGCCTCCTGCCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525238.2
ENST00000527496.1
CDS CCA 90 bp CGGCGGGCAAGCAGAAAGCGCTTGAGAAGCAGGGCCTGGAGCTGCTaGCGGGTCAGTGCCCAGCCCTGTACCCGGCCCACGGCGTCTGGC +
Preference number: 5 (lower is better)
Translates to: RRASRKRLRSRAWSC*RVSAQPCTRPTASG
Trigger: GCCAGACGCCGTGGGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTGCTTGCCCGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
ENST00000530092.2
CDS TCA 90 bp TTGCAGGCCGGCCGCACCCACTGCCTCTGGCTCACAGGGAGTCGTTaGAGTTGCTCAGGCGCCCGGGCTCCTCGCCCGGTGTCAGCTGCG +
Preference number: 5 (lower is better)
Translates to: LQAGRTHCLWLTGSR*SCSGARAPRPVSAA
Trigger: CGCAGCTGACACCGGGCGAGGAGCCCGGGCGCCTGAGCAACTTCAACGACTCCCTGTGAGCCAGAGGCAGTGGGTGCGGCCGGCCTGCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525238.2
ENST00000527496.1
CDS GCA 90 bp CAGAAAGCGCTTGAGAAGCAGGGCCTGGAGCTGCTGGCGGGTCAGTaGCCAGCCCTGTACCCGGCCCACGGCGTCTGGCCCAGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: QKALEKQGLELLAGQ*PALYPAHGVWPRAL
Trigger: CAGGGCTCTGGGCCAGACGCCGTGGGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
ENST00000530092.2
CDS GCA 90 bp CTGCGGCGGGCAAGCAGAAAGCGCTTGAGAAGCAGGGCCTGGAGCTaGTGGCGGGTCAGTGCCCAGCCCTGTACCCGGCCCACGGCGTCT +
Preference number: 5 (lower is better)
Translates to: LRRASRKRLRSRAWS*WRVSAQPCTRPTAS
Trigger: AGACGCCGTGGGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTGCTTGCCCGCCGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
ENST00000530092.2
CDS CCA 90 bp GCCCTCAGCGTGGCGATCAGCTTCCCTAGGCCAGCCAGCGTCCTGTaGGCACTGGCCCCTCCCAGCACAGTGCGGGCATCGGCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: ALSVAISFPRPASVL*ALAPPSTVRASASS
Trigger: GCTGCTAGCCGATGCCCGCACTGTGCTGGGAGGGGCCAGTGCCCACAGGACGCTGGCTGGCCTAGGGAAGCTGATCGCCACGCTGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
ENST00000531467.5
CDS CCA 90 bp ACGCCCAGGTGGGGCCGGATGGCGGCCATGCTGGAGCGGACGTCGTaGCCCAGGATGAAGGCAGAGCCACCACTGGGTGGGAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TPRWGRMAAMLERTS*PRMKAEPPLGGKRP
Trigger: TGGCCTCTTCCCACCCAGTGGTGGCTCTGCCTTCATCCTGGGCCACGACGTCCGCTCCAGCATGGCCGCCATCCGGCCCCACCTGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 90 bp GCCGTCATGGGCACCCGTGTAGGGCAGCACCAGCACCAGCTCGTGTaGCAGCTCCTCCACCAGCCGTGCCCCGGGCACCCAGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: AVMGTRVGQHQHQLV*QLLHQPCPGHPVLY
Trigger: GTACAGCACTGGGTGCCCGGGGCACGGCTGGTGGAGGAGCTGCCACACGAGCTGGTGCTGGTGCTGCCCTACACGGGTGCCCATGACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 90 bp AGTGCCCAGCCCTGTACCCGGCCCACGGCGTCTGGCCCAGAGCCCTaGTCAGTCTCTGGGGCTGACCCAGCTGGTTCCCCGTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SAQPCTRPTASGPEP*SVSGADPAGSPFSS
Trigger: GCTGGAGAACGGGGAACCAGCTGGGTCAGCCCCAGAGACTGACCAGGGCTCTGGGCCAGACGCCGTGGGCCGGGTACAGGGCTGGGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
ENST00000530092.2
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGCCGGGTGCCCACGTaGTGCCACTGCGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGRVPT*CHCAPS
Trigger: CGAGGGCGCGCAGTGGCACAACGTGGGCACCCGGCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS GCA 90 bp CCCGCAGGGCTGGCTGCGGGCTTCCAGGAAAGCGCTTCTCCAGGCTaGGAACGGAGACGCCAGGACTCAGGCCGGGCGGTGCCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: PAGLAAGFQESASPG*ERRRQDSGRAVPLL
Trigger: TAGAAGAGGCACCGCCCGGCCTGAGTCCTGGCGTCTCCGTTCGCAGCCTGGAGAAGCGCTTTCCTGGAAGCCCGCAGCCAGCCCTGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 90 bp GGCCCAGACGGACAAGCAGCATCACCGCAGAGACCAGGGACAGCCTaGATGCCTGGAACGGGAGGTCCTTGGCCCGGGGTGGGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GPDGQAASPQRPGTA*MPGTGGPWPGVGQC
Trigger: GCACTGCCCCACCCCGGGCCAAGGACCTCCCGTTCCAGGCATCCAGGCTGTCCCTGGTCTCTGCGGTGATGCTGCTTGTCCGTCTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433129.6
ENST00000526885.5
CDS TCA 90 bp GGGGCCGGATGGCGGCCATGCTGGAGCGGACGTCGTGGCCCAGGATaGAGGCAGAGCCACCACTGGGTGGGAAGAGGCCACTCAAGATGG +
Preference number: 5 (lower is better)
Translates to: GAGWRPCWSGRRGPG*RQSHHWVGRGHSRW
Trigger: CCATCTTGAGTGGCCTCTTCCCACCCAGTGGTGGCTCTGCCTTCATCCTGGGCCACGACGTCCGCTCCAGCATGGCCGCCATCCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS GCA 90 bp CGTCACTCGGCCCAGCGTGCCCACCAGGTGCCCCACATCAGCGTGTaGGTCCTGCCAGCTGTAGCCACCGCTCCCAGGGTCCAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: RHSAQRAHQVPHISV*VLPAVATAPRVQKG
Trigger: TCCTTTCTGGACCCTGGGAGCGGTGGCTACAGCTGGCAGGACGCACACGCTGATGTGGGGCACCTGGTGGGCACGCTGGGCCGAGTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 90 bp CAGTGTCCCAGGAAGTCAGCGCGGTCCCGCCCCGACACCCTACCGTaGGCAGCAGTGACGTCAGCAGCTCCGCGACATCCAGCATGGGTG +
Preference number: 5 (lower is better)
Translates to: QCPRKSARSRPDTLP*AAVTSAAPRHPAWV
Trigger: CACCCATGCTGGATGTCGCGGAGCTGCTGACGTCACTGCTGCGCACGGTAGGGTGTCGGGGCGGGACCGCGCTGACTTCCTGGGACACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433129.6
ENST00000525238.2
ENST00000526885.5
CDS GCA 90 bp CAGACGGACAAGCAGCATCACCGCAGAGACCAGGGACAGCCTGGATaGCTGGAACGGGAGGTCCTTGGCCCGGGGTGGGGCAGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QTDKQHHRRDQGQPG*LEREVLGPGWGSAR
Trigger: CCTGGCACTGCCCCACCCCGGGCCAAGGACCTCCCGTTCCAGGCATCCAGGCTGTCCCTGGTCTCTGCGGTGATGCTGCTTGTCCGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433129.6
ENST00000526885.5
CDS CCA 90 bp GCTTGGTTGGTTGAGGCTGGGCCGTGCTGCGTGCAGCCCTCAGCGTaGCGATCAGCTTCCCTAGGCCAGCCAGCGTCCTGTGGGCACTGG +
Preference number: 5 (lower is better)
Translates to: AWLVEAGPCCVQPSA*RSASLGQPASCGHW
Trigger: CCAGTGCCCACAGGACGCTGGCTGGCCTAGGGAAGCTGATCGCCACGCTGAGGGCTGCACGCAGCACGGCCCAGCCTCAACCAACCAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
CDS CCA 90 bp AGGATCAGAGGCTTCAGGCGTCTCCAGAGCAGGCGGGACAGCGGGTaGCTGTCCAGGGCTCCAATCAGCTCCGAGCAGGCGGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RIRGFRRLQSRRDSG*LSRAPISSEQAGLR
Trigger: CCTGAGCCCCGCCTGCTCGGAGCTGATTGGAGCCCTGGACAGCCACCCGCTGTCCCGCCTGCTCTGGAGACGCCTGAAGCCTCTGATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS-3UTR CAA 90 bp AGGGCAGTGGCAAGCAGTGGCTGGGCCCCCACCCGTCCAAGCAGCCCCCGCACCGCACGGAGGATTGCGTaGCTGGCTCGGTTGACAAAG +
Preference number: 5 (lower is better)
Translates to: RAVASSGWAPTRPSSPRTARRIA*LARLTK
Trigger: CTTTGTCAACCGAGCCAGCAACGCAATCCTCCGTGC...GGTGCGGGGGCTGCTTGGACGGGTGGGGGCCCAGCCACTGCTTGCCACTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp GGGCACCCGCAGGGTCAGTGTGTGACCCGCCGCGAATCTGCCCTTGAGATGTTGCCCCTGGGTGGCTCCTaGGACCACCCGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: GHPQGQCVTRRESALEMLPLGGS*DHPLPF
Trigger: GAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGGG...CAACATCTCAAGGGCAGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS TCA 90 bp ATGTTCCGCGAGCAGTTGCAGGGCCCGCGACACCAGGGCTGCCTCTaGGGGTGCCGCCTCCAGCTTGTCCAAGGACAGGCACTCCGTCAC +
Preference number: 5 (lower is better)
Translates to: MFREQLQGPRHQGCL*GCRLQLVQGQALRH
Trigger: GTGACGGAGTGCCTGTCCTTGGACAAGCTGGAGGCGGCACCCTCAGAGGCAGCCCTGGTGTCGCGGGCCCTGCAACTGCTCGCGGAACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 90 bp GCTCCGCCAGCCGCGTGTCTAGCTCTCGGAAGAGTGTGGCGAAGCTaGCGTCATGGGCACCCGTGTAGGGCAGCACCAGCACCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: APPAACLALGRVWRS*RHGHPCRAAPAPAR
Trigger: ACGAGCTGGTGCTGGTGCTGCCCTACACGGGTGCCCATGACGGCAGCTTCGCCACACTCTTCCGAGAGCTAGACACGCGGCTGGCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 90 bp TGGGCCAGGTCCTCAGCGGCCTCCAACAAGCTGTGCAAGGGCTCCTaGGCTTGGCCCAGTGCCAACCCCAGGGATTCCGTGCGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: WARSSAASNKLCKGS*AWPSANPRDSVRSS
Trigger: ACTGCTGCGCACGGAATCCCTGGGGTTGGCACTGGGCCAAGCCCAGGAGCCCTTGCACAGCTTGTTGGAGGCCGCTGAGGACCTGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS CCA 90 bp CTCCGAGCAGGCGGGGCTCAGGCTGCTGTCTGGCAGGGCGGATTCTaGCTCCTGCCCCACCAGCTCCATCAGGTCACTAGCCTCGTACCA +
Preference number: 5 (lower is better)
Translates to: LRAGGAQAAVWQGGF*LLPHQLHQVTSLVP
Trigger: TGGTACGAGGCTAGTGACCTGATGGAGCTGGTGGGGCAGGAGCCAGAATCCGCCCTGCCAGACAGCAGCCTGAGCCCCGCCTGCTCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 90 bp GGTGATGTGGCCCTGGTAGAAGTCCAGGCTGAGCCCCCGCAGGGCTaGCTGCGGGCTTCCAGGAAAGCGCTTCTCCAGGCTGCGAACGGA +
Preference number: 5 (lower is better)
Translates to: GDVALVEVQAEPPQG*LRASRKALLQAANG
Trigger: TCCGTTCGCAGCCTGGAGAAGCGCTTTCCTGGAAGCCCGCAGCCAGCCCTGCGGGGGCTCAGCCTGGACTTCTACCAGGGCCACATCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 90 bp CGGACAAGCAGCATCACCGCAGAGACCAGGGACAGCCTGGATGCCTaGAACGGGAGGTCCTTGGCCCGGGGTGGGGCAGTGCCAGGACAT +
Preference number: 5 (lower is better)
Translates to: RTSSITAETRDSLDA*NGRSLARGGAVPGH
Trigger: ATGTCCTGGCACTGCCCCACCCCGGGCCAAGGACCTCCCGTTCCAGGCATCCAGGCTGTCCCTGGTCTCTGCGGTGATGCTGCTTGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433129.6
ENST00000526885.5
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCCCCTGGGTGGCTCCTaGGACCACCCGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGPLGGS*DHPLPF
Trigger: GAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGGG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS GCA 90 bp CAGGCGGGGCTCAGGCTGCTGTCTGGCAGGGCGGATTCTGGCTCCTaGCCCACCAGCTCCATCAGGTCACTAGCCTCGTACCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: QAGLRLLSGRADSGS*PTSSIRSLASYQLR
Trigger: CCTCAACTGGTACGAGGCTAGTGACCTGATGGAGCTGGTGGGGCAGGAGCCAGAATCCGCCCTGCCAGACAGCAGCCTGAGCCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 90 bp ACACTCTGCTTGGAGACCAGCCCCACATCCTGCAGCAGACGGTCCTaGTCGGGGCCCACTACAGCGGCACTCAGACCCTTCAGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: TLCLETSPTSCSRRS*SGPTTAALRPFSRP
Trigger: TGGGCGGCTGAAGGGTCTGAGTGCCGCTGTAGTGGGCCCCGAGCAGGACCGTCTGCTGCAGGATGTGGGGCTGGTCTCCAAGCAGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS GCA 90 bp CTCTGCCTGACTCCACCCCCATCGGGTCGCCCGGCACCGCTTGCATaGCTCCAGCGATGGAGAGCTCACTCCCATGCCATGTATTGGCGG +
Preference number: 5 (lower is better)
Translates to: LCLTPPPSGRPAPLA*LQRWRAHSHAMYWR
Trigger: CCGCCAATACATGGCATGGGAGTGAGCTCTCCATCGCTGGAGGCATGCAAGCGGTGCCGGGCGACCCGATGGGGGTGGAGTCAGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 90 bp GGAGCGGACGTCGTGGCCCAGGATGAAGGCAGAGCCACCACTGGGTaGGAAGAGGCCACTCAAGATGGACAGGGTGGTGGTCTTGCCGGC +
Preference number: 5 (lower is better)
Translates to: GADVVAQDEGRATTG*EEATQDGQGGGLAG
Trigger: GCCGGCAAGACCACCACCCTGTCCATCTTGAGTGGCCTCTTCCCACCCAGTGGTGGCTCTGCCTTCATCCTGGGCCACGACGTCCGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACATGTTCCGCGAGCAGTaGCAGGGCCCGCGACACCAG +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHMFREQ*QGPRHQ
Trigger: CTGGTGTCGCGGGCCCTGCAACTGCTCGCGGAACAT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGGGCTGTGGCAGGAGTaGGCTTCGGTGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHGLWQE*ASVLQQ
Trigger: CTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCCC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp GGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGGCTGTGGCAGGAGTaGGCTTCGGTGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GPCITMAKRFLPTTSQRRGLWQE*ASVLQQ
Trigger: CTGCTGCAGCACCGAAGCCAACTCCTGCCACAGCCC...CCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAGGGCCGTCGCCAGCTaGCGTTTGTTCCCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHRAVAS*RLFPPL
Trigger: CAGCGGAGGGAACAAACGCAAGCTGGCGACGGCCCT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTCTGCCCTTGAGATGTaGCGGGCTGCCCAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHSALEM*RAAQAA
Trigger: CGCTGCCTGGGCAGCCCGCAACATCTCAAGGGCAGA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp GCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGTCTGCCCTTGAGATGTaGCGGGCTGCCCAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: APVSPWPRGSCRPPPSAGSALEM*RAAQAA
Trigger: CGCTGCCTGGGCAGCCCGCAACATCTCAAGGGCAGA...CCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGCCGCGAATCTGCCCTaGAGATGTTGCGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHAANLP*RCCGLP
Trigger: GGGCAGCCCGCAACATCTCAAGGGCAGATTCGCGGC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACAACTGGCTGACGCGTTaGGGGTGCTGCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHNWLTR*GCCRPG
Trigger: GCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS GCA 90 bp AGGGGACGGGACAGAGAGGTCAGGACAACGGTCGGGCTGAAGACGTaGGGTGCGGCTGCGGGCAACTCCCTGCCCCTTTCTGAACCTCAT +
Preference number: 5 (lower is better)
Translates to: RGRDREVRTTVGLKT*GAAAGNSLPLSEPH
Trigger: ATGAGGTTCAGAAAGGGGCAGGGAGTTGCCCGCAGCCGCACCGCACGTCTTCAGCCCGACCGTTGTCCTGACCTCTCTGTCCCGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525238.2
ENST00000526885.5
ENST00000527496.1
ENST00000530703.1
ENST00000531467.5
CDS GCA 90 bp AGGTGGCGAGTCTGCACACTCTGCTTGGAGACCAGCCCCACATCCTaGAGCAGACGGTCCTGCTCGGGGCCCACTACAGCGGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: RWRVCTLCLETSPTS*SRRSCSGPTTAALR
Trigger: TCTGAGTGCCGCTGTAGTGGGCCCCGAGCAGGACCGTCTGCTGCAGGATGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGACTCGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 90 bp TGGGCCAGGTCCTCAGCGGCCTCCAACAAGCTGTGCAAGGGCTCCTaGGCTTGGCCCAGTGCCAACCCCAGGGATTCCTGGGGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: WARSSAASNKLCKGS*AWPSANPRDSWGER
Trigger: TCTTTCTCCCCAGGAATCCCTGGGGTTGGCACTGGGCCAAGCCCAGGAGCCCTTGCACAGCTTGTTGGAGGCCGCTGAGGACCTGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS CCA 90 bp CGGCTCACCTCCTGCAGCTTCTGCTCAAGGGTGGGAGACGGATGTTaGTCAGGGGCTGAGTCCAACGACCCAACCCAGCCCAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RLTSCSFCSRVGDGC*SGAESNDPTQPKPQ
Trigger: CTGGGGCTTGGGCTGGGTTGGGTCGTTGGACTCAGCCCCTGACCAACATCCGTCTCCCACCCTTGAGCAGAAGCTGCAGGAGGTGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACACGCTCCACCAGGTCTaGCAGGTACACGAAGCCGCC +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHTLHQV*QVHEAA
Trigger: GGCGGCTTCGTGTACCTGCAAGACCTGGTGGAGCGT...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCAGGCCGCAGCCAGGTaGGCGCGGGAGAAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPQAAAR*AREKKA
Trigger: CGCCTTCTTCTCCCGCGCCAACCTGGCTGCGGCCTG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTTCTACCAGCACCTTaGGGTCCAGCGGGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLLPAP*GPAGWG
Trigger: GCCCCACCCCGCTGGACCCAAAGGTGCTGGTAGAAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGTGTCAGCCTTCTCATaGGTGGTCAGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHVSAFS*VVRGRR
Trigger: CCGCCTGCCCCTGACCACCAATGAGAAGGCTGACAC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp GGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGTGTCAGCCTTCTCATaGGTGGTCAGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GPLYHHGQEVLADHLPAQVSAFS*VVRGRR
Trigger: CCGCCTGCCCCTGACCACCAATGAGAAGGCTGACAC...CTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCCCCTGGGTGGCTCCTaGGACCACCCGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPPLGGS*DHPLPF
Trigger: GAACGGGAGCGGGTGGTCCAAGGAGCCACCCAGGGG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp ACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGGCAAGGGCCGTCGCCAGCTaGCGTTTGTTCCCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: TSQRRGDWNCLSPKRSKARAVAS*RLFPPL
Trigger: CAGCGGAGGGAACAAACGCAAGCTGGCGACGGCCCT...TGCCTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TCAGCCATGGCCTGGTTCCGCACCATGTCAATGAGCCCCCGGCCCAAGCAGAAGGCCGCGAATCTGCCCTaGAGATGTTGCGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SAMAWFRTMSMSPRPKQKAANLP*RCCGLP
Trigger: GGGCAGCCCGCAACATCTCAAGGGCAGATTCGCGGC...CTTCTGCTTGGGCCGGGGGCTCATTGACATGGTGCGGAACCAGGCCATGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCCGCGAATCTGCCCTaGAGATGTTGCGGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGAANLP*RCCGLP
Trigger: GGGCAGCCCGCAACATCTCAAGGGCAGATTCGCGGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS TCA 90 bp CCCAGGGCATCAGAGCCCGGCCCACCTATGGGAGGTGAGCATCACTaGACGGCCCTCCCGCACCACGGCCAAAAGGCTGTTCCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PRASEPGPPMGGEHH*TALPHHGQKAVPKE
Trigger: TTCCTTTGGAACAGCCTTTTGGCCGTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGGTGGGCCGGGCTCTGATGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS TCA 90 bp TTAACCACAGCCCAGGGCATCAGAGCCCGGCCCACCTATGGGAGGTaGGCATCACTGAACGGCCCTCCCGCACCACGGCCAAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LTTAQGIRARPTYGR*ASLNGPPAPRPKGC
Trigger: ACAGCCTTTTGGCCGTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGGTGGGCCGGGCTCTGATGCCCTGGGCTGTGGTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 90 bp TGGACTCTGCCTGACTCCACCCCCATCGGGTCGCCCGGCACCGCTTaGATGCCTCCAGCGATGGAGAGCTCACTCCCATGCCATGTATTG +
Preference number: 5 (lower is better)
Translates to: WTLPDSTPIGSPGTA*MPPAMESSLPCHVL
Trigger: CAATACATGGCATGGGAGTGAGCTCTCCATCGCTGGAGGCATGCAAGCGGTGCCGGGCGACCCGATGGGGGTGGAGTCAGGCAGAGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 90 bp CCAGAAAGGATCGCAGGGCCTCCATGTGGTCCCGGCCTCCAGGTCTaGGCTGCCTTCTTCCTTCATCCTGCATCTGCAGGAGCCGCTGCA +
Preference number: 5 (lower is better)
Translates to: PERIAGPPCGPGLQV*AAFFLHPASAGAAA
Trigger: TGCAGCGGCTCCTGCAGATGCAGGATGAAGGAAGAAGGCAGCCCAGACCTGGAGGCCGGGACCACATGGAGGCCCTGCGATCCTTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 90 bp CTACCGTGCGCAGCAGTGACGTCAGCAGCTCCGCGACATCCAGCATaGGTGGTTCCAGTGGAGACTGCTTGGTTGGTTGAGGCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: LPCAAVTSAAPRHPA*VVPVETAWLVEAGP
Trigger: CGGCCCAGCCTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGATGTCGCGGAGCTGCTGACGTCACTGCTGCGCACGGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525238.2
ENST00000526885.5
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAGACTGCTTGGTTGGTaGAGGCTGGGCCGTGCTGCG +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRLLGW*RLGRAA
Trigger: CGCAGCACGGCCCAGCCTCAACCAACCAAGCAGTCT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCTAGCCTCGTACCAGTaGAGGGAGGGGCCCACTGTG +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGLASYQ*REGPTV
Trigger: CACAGTGGGCCCCTCCCTCAACTGGTACGAGGCTAG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACCACGGACAGCTTCCGTaGCATCCCACCAGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHHGQLP*HPTREV
Trigger: CACCTCTCTGGTGGGATGCAACGGAAGCTGTCCGTG...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp GCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGCACGGACAGCTTCCGTaGCATCCCACCAGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: APVSPWPRGSCRPPPSAGHGQLP*HPTREV
Trigger: CACCTCTCTGGTGGGATGCAACGGAAGCTGTCCGTG...CCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCCCACTGGCCAAGACCTaGGCCACTTCAGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: LAHQARVGLDQEVRQVPAPLAKT*ATSAGT
Trigger: AGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGG...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000530092.2
CDS-3UTR CAA 90 bp ACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCGCTCAAAGATGGCCAAGAGGTTCTaGCCGACCACCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: TTSQRRGDWNCLSPKRSKMAKRF*PTTSQR
Trigger: GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCAT...CTTTGAGCGCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCATGGCCAAGAGGTTCTaGCCGACCACCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGMAKRF*PTTSQR
Trigger: GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCAT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGATGGCCAAGAGGTTCTaGCCGACCACCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: FLPTTSQRRGDWNCLSPKMAKRF*PTTSQR
Trigger: GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCAT...CTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS-3UTR CAA 90 bp CCCCCGTCACCATGCGAAACGTGGACGTCTTCCCTGCTCCATTCACACCCAGCAAACTGGCTGACGCGTTaGGGGTGCTGCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PPSPCETWTSSLLHSHPANWLTR*GCCRPG
Trigger: GCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTT...TGCTGGGTGTGAATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGACGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS TCA 90 bp TCAGGAAGATCTCCTCGAGGCTGGTGTCGGAGATCCCGTAGCCAGTaGGCCTCAGCTCCGCCAGCCGCGTGTCTAGCTCTCGGAAGAGTG +
Preference number: 5 (lower is better)
Translates to: SGRSPRGWCRRSRSQ*ASAPPAACLALGRV
Trigger: CACTCTTCCGAGAGCTAGACACGCGGCTGGCGGAGCTGAGGCTCACTGGCTACGGGATCTCCGACACCAGCCTCGAGGAGATCTTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS TCA 90 bp CCAGCGATGGAGAGCTCACTCCCATGCCATGTATTGGCGGCCTGGTaGAGGCTCCCTGACATGCACGGGGGATTCCTGTGCACGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PAMESSLPCHVLAAW*RLPDMHGGFLCTGE
Trigger: CTCACCCGTGCACAGGAATCCCCCGTGCATGTCAGGGAGCCTTCACCAGGCCGCCAATACATGGCATGGGAGTGAGCTCTCCATCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS GCA 90 bp CACTCCCATGCCATGTATTGGCGGCCTGGTGAAGGCTCCCTGACATaGACGGGGGATTCCTGTGCACGGGTGAGCCATCTGCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: HSHAMYWRPGEGSLT*TGDSCARVSHLPSP
Trigger: AGGGGAAGGCAGATGGCTCACCCGTGCACAGGAATCCCCCGTGCATGTCAGGGAGCCTTCACCAGGCCGCCAATACATGGCATGGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 90 bp ATTCCGTGCGCAGCAGTGACGTCAGCAGCTCCGCGACATCCAGCATaGGTGGTTCCAGTGGAGACTGCTTGGTTGGTTGAGGCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: IPCAAVTSAAPRHPA*VVPVETAWLVEAGP
Trigger: CGGCCCAGCCTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGATGTCGCGGAGCTGCTGACGTCACTGCTGCGCACGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS CCA 90 bp CTACCGTGCGCAGCAGTGACGTCAGCAGCTCCGCGACATCCAGCATaGGTGGTTCCAGTGGAGACTGCTTGGTTGGTTGAGGCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LPCAAVTSAAPRHPA*VVPVETAWLVEAVL
Trigger: CAGCACGGCCTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGATGTCGCGGAGCTGCTGACGTCACTGCTGCGCACGGTAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS-3UTR CAA 90 bp CACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGGTCTTGACGTCTGCACACTCTGCTaGGAGACCAGCCCCACATCC +
Preference number: 5 (lower is better)
Translates to: HPLLSLQALAHQARVGLDVCTLC*ETSPTS
Trigger: GGATGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGAC...GTCAAGACCTACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACGTCCAGGATAACAACTaGGGAGCCGCCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHVQDNN*GAAHKG
Trigger: GCCTTTGTGGGCGGCTCCCAAGTTGTTATCCTGGAC...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCGTTGCTGGCTCGGTaGACAAAGGCCACCATGGAG +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGALLAR*TKATME
Trigger: CTCCATGGTGGCCTTTGTCAACCGAGCCAGCAACGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp GACCTCATTCACCCACTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAATGAGCTGCAGGTGCTaGGCTCGGGTGACTCGCTCC +
Preference number: 5 (lower is better)
Translates to: DLIHPLLSLQALAHQARVMSCRC*ARVTRS
Trigger: GGAGCGAGTCACCCGAGCCAAGCACCTGCAGCTCAT...TACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAGTGGGTGAATGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TGCTCTGCGCCGTGCACCGCCAGCTCTCCAAAGACGCGCGCCAGGGCGCAGCGCGTGGCCATGCTTCCATaGATGCCAATAAAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: CSAPCTASSPKTRARAQRVAMLP*MPIKRF
Trigger: AAACCTCTTTATTGGCATCAATGGAAGCATGGCCAC...GCGCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCACGGCGCAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAGGGCCGTCGCCAGCTaGCGTTTGTTCCCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLRAVAS*RLFPPL
Trigger: CAGCGGAGGGAACAAACGCAAGCTGGCGACGGCCCT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAAACTGGCTGACGCGTTaGGGGTGCTGCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLNWLTR*GCCRPG
Trigger: GCCAGGCCTGCAGCACCCCAAACGCGTCAGCCAGTT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp CTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAAGTCAGACAGGTTCCGGCCTTTACCCAGGCCATCTaGGACAAGCCCCTGCCTACA +
Preference number: 5 (lower is better)
Translates to: LAHQARVGLDQEVRQVPAFTQAI*DKPLPT
Trigger: TGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAA...GGCCGGAACCTGTCTGACTTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS TCA 90 bp GCTGAAGACGTGCGGTGCGGCTGCGGGCAACTCCCTGCCCCTTTCTaGACCTCATTCCTTTATCCCACAGCGCAGGGTTCCTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: AEDVRCGCGQLPAPF*TSFLYPTAQGSWKL
Trigger: GAGCTTCCAGGAACCCTGCGCTGTGGGATAAAGGAATGAGGTTCAGAAAGGGGCAGGGAGTTGCCCGCAGCCGCACCGCACGTCTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525238.2
ENST00000526885.5
ENST00000527496.1
ENST00000530703.1
ENST00000531467.5
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGAGACCAGGGAGTCGTaGAAGTTGCTCAGGCGCCCG +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPETRES*KLLRRP
Trigger: CGGGCGCCTGAGCAACTTCAACGACTCCCTGGTCTC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGTGGAGACTGCTTGGTaGGTTGAGGCTGGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPVETAW*VEAGPC
Trigger: GCACGGCCCAGCCTCAACCAACCAAGCAGTCTCCAC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCCCACTGGCCAAGACCTaGGCCACTTCAGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGPLAKT*ATSAGT
Trigger: AGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGG...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCACGGAGGATTGCGTaGCTGGCTCGGTTGACAAAG +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGARRIA*LARLTK
Trigger: CTTTGTCAACCGAGCCAGCAACGCAATCCTCCGTGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAATGAGCTGCAGGTGCTaGGCTCGGGTGACTCGCTCC +
Preference number: 5 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLMSCRC*ARVTRS
Trigger: GGAGCGAGTCACCCGAGCCAAGCACCTGCAGCTCAT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATGAGCTGCAGGTGCTaGGCTCGGGTGACTCGCTCC +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPMSCRC*ARVTRS
Trigger: GGAGCGAGTCACCCGAGCCAAGCACCTGCAGCTCAT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATGGCCAAGAGGTTCTaGCCGACCACCTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPMAKRF*PTTSQR
Trigger: GCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCAT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCACTGCCCACGGTATACCTaGGTCAAGTTCCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: FSPGHQPLCQPESRAPRHCPRYT*VKFLST
Trigger: GGTGCTGAGGAACTTGACCAAGGTATACCGTGGGCA...GTGCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS TCA 90 bp CAGCTGGTTCCCCGTTCTCCAGCGCTGTCTCCTGTGGCGGCATCTTaGGCCGTAGGGTTACGTCTAGGCCAGCAATGCCTGTGCATAGGT +
Preference number: 5 (lower is better)
Translates to: QLVPRSPALSPVAAS*AVGLRLGQQCLCIG
Trigger: ACCTATGCACAGGCATTGCTGGCCTAGACGTAACCCTACGGCTCAAGATGCCGCCACAGGAGACAGCGCTGGAGAACGGGGAACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 90 bp CTTGCATGCCTCCAGCGATGGAGAGCTCACTCCCATGCCATGTATTaGCGGCCTGGTGAAGGCTCCCTGACATGCACGGGGGATTCCTGT +
Preference number: 5 (lower is better)
Translates to: LACLQRWRAHSHAMY*RPGEGSLTCTGDSC
Trigger: ACAGGAATCCCCCGTGCATGTCAGGGAGCCTTCACCAGGCCGCCAATACATGGCATGGGAGTGAGCTCTCCATCGCTGGAGGCATGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 90 bp CCTGTTTCAAGATCCGGCTCACCTCCTGCAGCTTCTGCTCAAGGGTaGGAGACGGATGTTGGTCAGGGGCTGAGTCCAACGACCCAACCC +
Preference number: 5 (lower is better)
Translates to: PVSRSGSPPAASAQG*ETDVGQGLSPTTQP
Trigger: GGGTTGGGTCGTTGGACTCAGCCCCTGACCAACATCCGTCTCCCACCCTTGAGCAGAAGCTGCAGGAGGTGAGCCGGATCTTGAAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGCCGATGGCAGTGGCTaGTTTGGGAAGTGGCATTCA +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGADGSG*FGKWHS
Trigger: TGAATGCCACTTCCCAAACAAGCCACTGCCATCGGC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp CTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAATGTCCATGCGGATTTaGATGCGCACGTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LYFLQGTSPSASLSPGLLMSMRI*MRTWPG
Trigger: CCCCGGCCACGTGCGCATCAAAATCCGCATGGACAT...TAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAGGATGTCTCCCAGCTaGAGCACCAGAACCAGCAGT +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGRMSPS*STRTSS
Trigger: ACTGCTGGTTCTGGTGCTCAAGCTGGGAGACATCCT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGTCTGCACACTCTGCTaGGAGACCAGCCCCACATCC +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPVCTLC*ETSPTS
Trigger: GGATGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGAC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp CTTCTTAGTCTTCAGGCCCTGGCGCACCAGGCGCGGGTAGGTCTTGACCAGGAATCCTGTGGCGGCATCTaGAGCCGTAGGGTTACGTCT +
Preference number: 5 (lower is better)
Translates to: LLSLQALAHQARVGLDQESCGGI*SRRVTS
Trigger: AGACGTAACCCTACGGCTCAAGATGCCGCCACAGGA...TTCCTGGTCAAGACCTACCCGCGCCTGGTGCGCCAGGGCCTGAAGACTAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp CCCCCGTCACCATGCGAAACGTGGACGTCTTCCCTGCTCCATTCACACCCAGCACCACTGGCCAAGACCTaGGCCACTTCAGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: PPSPCETWTSSLLHSHPAPLAKT*ATSAGT
Trigger: AGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGG...TGCTGGGTGTGAATGGAGCAGGGAAGACGTCCACGTTTCGCATGGTGACGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp CCTCAAGACTTTACCCAGGCCATCTTGGACAAGCCCCTGCCTACAAGGGGCCAGGCGTTGCTGGCTCGGTaGACAAAGGCCACCATGGAG +
Preference number: 5 (lower is better)
Translates to: PQDFTQAILDKPLPTRGQALLAR*TKATME
Trigger: CTCCATGGTGGCCTTTGTCAACCGAGCCAGCAACGC...CTGGCCCCTTGTAGGCAGGGGCTTGTCCAAGATGGCCTGGGTAAAGTCTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTGCCCACGGTATACCTaGGTCAAGTTCCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGCPRYT*VKFLST
Trigger: GGTGCTGAGGAACTTGACCAAGGTATACCGTGGGCA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS CCA 90 bp GGGCCGAGGTCCGCACCAGTAGCTCCTCCGAAAAGGAAAATTCCATaGTTCAGGGATCCCGTACTGGCCTGGGCACACAGCTTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: GPRSAPVAPPKRKIP*FRDPVLAWAHSFQV
Trigger: TACCTGGAAGCTGTGTGCCCAGGCCAGTACGGGATCCCTGAACCATGGAATTTTCCTTTTCGGAGGAGCTACTGGTGCGGACCTCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 90 bp ATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTaGAACTGCCTGTCTCCTGTGGATATAGAAAGGAGGGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: MAKRFLPTTSQRRGD*NCLSPVDIERRDWV
Trigger: GACCCAGTCCCTCCTTTCTATATCCACAGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTCCTGTGGCGGCATCTaGAGCCGTAGGGTTACGTCT +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSCGGI*SRRVTS
Trigger: AGACGTAACCCTACGGCTCAAGATGCCGCCACAGGA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGATGAGCTGCAGGTGCTaGGCTCGGGTGACTCGCTCC +
Preference number: 5 (lower is better)
Translates to: CSSSVKRRKRGPCITMAKMSCRC*ARVTRS
Trigger: GGAGCGAGTCACCCGAGCCAAGCACCTGCAGCTCAT...CTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435683.7
ENST00000529442.7
CDS GCA 90 bp GTTGCCACTGGCCAAGACCTTGGCCACTTCAGCAGGAACTTCTGGTaGCGAGAACCTGCAGACAATGGGCTGTGGGAGCTATGCTGCACT +
Preference number: 5 (lower is better)
Translates to: VATGQDLGHFSRNFW*REPADNGLWELCCT
Trigger: AGTGCAGCATAGCTCCCACAGCCCATTGTCTGCAGGTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS GCA 90 bp AAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTaGCTGTCTCCTGTGGATATAGAAAGGAGGGACTGGGTCCATGAG +
Preference number: 5 (lower is better)
Translates to: KRFLPTTSQRRGDWN*LSPVDIERRDWVHE
Trigger: CTCATGGACCCAGTCCCTCCTTTCTATATCCACAGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCATGGCAGTGGCTTGTTaGGGAAGTGGCATTCATGGT +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGMAVAC*GSGIHG
Trigger: ACCATGAATGCCACTTCCCAAACAAGCCACTGCCAT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTGCAGCATGGCCACATaGGAACTGTCGTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGCSMAT*ELSFMK
Trigger: CTTCATGAACGACAGTTCCAATGTGGCCATGCTGCA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCGTCCAGGATAACAACTaGGGAGCCGCCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: CCSSSVKRRKRGPCITMAVQDNN*GAAHKG
Trigger: GCCTTTGTGGGCGGCTCCCAAGTTGTTATCCTGGAC...GGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCAAGCTGCCAGCCTTTGTTGTaGAACCAGATCTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: SCRPPPSAGVTGTACLPSCQPLL*NQILRL
Trigger: CAGTCTCAAGATCTGGTTCAACAACAAAGGCTGGCA...GCTTGGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp AGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTGCCTGTCTCCCGAGTGCCAGCCTTTGTaGTTGAACCAGATCTTGAGA +
Preference number: 5 (lower is better)
Translates to: RFLPTTSQRRGDWNCLSPECQPL*LNQILR
Trigger: TCTCAAGATCTGGTTCAACAACAAAGGCTGGCACTC...GGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp GCCCCTGTATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGATGGAGTGCCAGCCTTaGTTGTTGAACCAGATCTTG +
Preference number: 5 (lower is better)
Translates to: APVSPWPRGSCRPPPSAGMECQP*LLNQIL
Trigger: CAAGATCTGGTTCAACAACAAAGGCTGGCACTCCAT...CCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGATACAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCAAAGATGGCATCGGATaGAGGGCAGTATCCCATGCT +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGKDGIG*RAVSHA
Trigger: AGCATGGGATACTGCCCTCAATCCGATGCCATCTTT...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTCCTTCCCCTGGTCCTaGGAGAAGTACAAGAATACC +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGSFPWS*EKYKNT
Trigger: GGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS TCA 90 bp GGTTGGCAGGGGCCACATATGCCCTCTGCTGGAAGGCCAGAAAGATaGGCACCACGATGCATGCTGGCACCAAGTAGTTACACATGTCCC +
Preference number: 5 (lower is better)
Translates to: GWQGPHMPSAGRPER*APRCMLAPSSYTCP
Trigger: GGGACATGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAGAGGGCATATGTGGCCCCTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525073.6
ENST00000529442.7
CDS TCA 90 bp TCTAGGTCTCCAAGGGTGCTAGCTATCTGTAGCCATGGCCCCACCTaGCAGGAAGTTCTCACCCAAGCGCTCAAAGGCATCAGCCATGGC +
Preference number: 5 (lower is better)
Translates to: SRSPRVLAICSHGPT*QEVLTQALKGISHG
Trigger: GCCATGGCTGATGCCTTTGAGCGCTTGGGTGAGAACTTCCTGTCAGGTGGGGCCATGGCTACAGATAGCTAGCACCCTTGGAGACCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CCA 90 bp AGGCAAAGGGACTCATTGGAGATCTCACAGACGAGTCTTCCTCACTaGGTCAGACACACTCTGTCTGGGGGCCCAGACGGACAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RQRDSLEISQTSLPH*VRHTLSGGPDGQAA
Trigger: TGCTGCTTGTCCGTCTGGGCCCCCAGACAGAGTGTGTCTGACCCAGTGAGGAAGACTCGTCTGTGAGATCTCCAATGAGTCCCTTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433129.6
ENST00000526885.5
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTCTGTCCCTGATCTTATaGGTCCTCGTGACCACGTCA +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPLSLIL*VLVTTS
Trigger: TGACGTGGTCACGAGGACCAATAAGATCAGGGACAG...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS GCA 90 bp ATAAGGAAGACCTGTTTCAAGATCCGGCTCACCTCCTGCAGCTTCTaGTCAAGGGTGGGAGACGGATGTTGGTCAGGGGCTGAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: IRKTCFKIRLTSCSF*SRVGDGCWSGAESN
Trigger: GTTGGACTCAGCCCCTGACCAACATCCGTCTCCCACCCTTGAGCAGAAGCTGCAGGAGGTGAGCCGGATCTTGAAACAGGTCTTCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCTGCGGAAAGCAGGTGTaGTTCACATTACAGATGAGA +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGCGKQV*FTLQMR
Trigger: TCTCATCTGTAATGTGAACAACACCTGCTTTCCGCA...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTAGGCGTGGCCATGCTTCCATaGATGCCAATAAAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: YFLQGTSPSASLSPGLLGVAMLP*MPIKRF
Trigger: AAACCTCTTTATTGGCATCAATGGAAGCATGGCCAC...GCCTAGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTCCTTCCCCTGGTCCTaGGAGAAGTACAAGAATACC +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPSFPWS*EKYKNT
Trigger: GGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTTGCCAGCCTTTGTTGTaGAACCAGATCTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPCQPLL*NQILRL
Trigger: CAGTCTCAAGATCTGGTTCAACAACAAAGGCTGGCA...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGAGTGCCAGCCTTTGTaGTTGAACCAGATCTTGAGA +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPECQPL*LNQILR
Trigger: TCTCAAGATCTGGTTCAACAACAAAGGCTGGCACTC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTATGGAGTGCCAGCCTTaGTTGTTGAACCAGATCTTG +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPMECQP*LLNQIL
Trigger: CAAGATCTGGTTCAACAACAAAGGCTGGCACTCCAT...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS-3UTR CAA 90 bp AGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAGAGGTTCTTGTGCCCACGGTATACCTaGGTCAAGTTCCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: SVKRRKRGPCITMAKRFLCPRYT*VKFLST
Trigger: GGTGCTGAGGAACTTGACCAAGGTATACCGTGGGCA...CAAGAACCTCTTGGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCAAAGATGGCATCGGATaGAGGGCAGTATCCCATGCT +
Preference number: 5 (lower is better)
Translates to: CCSSSVKRRKRGPCITMAKDGIG*RAVSHA
Trigger: AGCATGGGATACTGCCCTCAATCCGATGCCATCTTT...GGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TGCTGCAGCAGTAGTGTGAAGAGAAGGAAGAGGGGCCCCTGTATCACCATGGCCTCCTTCCCCTGGTCCTaGGAGAAGTACAAGAATACC +
Preference number: 5 (lower is better)
Translates to: CCSSSVKRRKRGPCITMASFPWS*EKYKNT
Trigger: GGTATTCTTGTACTTCTCCAAGGACCAGGGGAAGGA...GGCCATGGTGATACAGGGGCCCCTCTTCCTTCTCTTCACACTACTGCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp ATCACCATGGCCAAGAGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAGTAGTTACACTGCATaGGAGATGGCAGTTACCTTT +
Preference number: 5 (lower is better)
Translates to: ITMAKRFLPTTSQRRGDWSSYTA*EMAVTF
Trigger: AAAGGTAACTGCCATCTCCAATGCAGTGTAACTACT...CCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCTCTTGGCCATGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS-3UTR CAA 90 bp TCTTTATTTTCTCCAGGGCACCAGCCCCTCTGCCAGCCTGAGTCCAGGGCTCCTGTGGCCATGCTTCCATaGATGCCAATAAAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SLFSPGHQPLCQPESRAPVAMLP*MPIKRF
Trigger: AAACCTCTTTATTGGCATCAATGGAAGCATGGCCAC...AGGAGCCCTGGACTCAGGCTGGCAGAGGGGCTGGTGCCCTGGAGAAAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000525073.6
CDS TCA 90 bp GAACTGCCTGTCTCCTGTGGATATAGAAAGGAGGGACTGGGTCCATaGGAGTCTTGGTTTCTGGCCCTTTCTCCATCCATGTCACTCTGG +
Preference number: 5 (lower is better)
Translates to: ELPVSCGYRKEGLGP*ESWFLALSPSMSLW
Trigger: CCAGAGTGACATGGATGGAGAAAGGGCCAGAAACCAAGACTCTCATGGACCCAGTCCCTCCTTTCTATATCCACAGGAGACAGGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CCA 90 bp GGTGACTGGAACTGCCTGTCTCCTGTGGATATAGAAAGGAGGGACTaGGTCCATGAGAGTCTTGGTTTCTGGCCCTTTCTCCATCCATGT +
Preference number: 5 (lower is better)
Translates to: GDWNCLSPVDIERRD*VHESLGFWPFLHPC
Trigger: ACATGGATGGAGAAAGGGCCAGAAACCAAGACTCTCATGGACCCAGTCCCTCCTTTCTATATCCACAGGAGACAGGCAGTTCCAGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 90 bp ATATGCCCTCTGCTGGAAGGCCAGAAAGATGAGCACCACGATGCATaGTGGCACCAAGTAGTTACACATGTCCCAGAGAAAGTTGCCAAG +
Preference number: 5 (lower is better)
Translates to: ICPLLEGQKDEHHDA*WHQVVTHVPEKVAK
Trigger: CTTGGCAACTTTCTCTGGGACATGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAGAGGGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525073.6
ENST00000529442.7
CDS CCA 90 bp GTGGATATAGAAAGGAGGGACTGGGTCCATGAGAGTCTTGGTTTCTaGCCCTTTCTCCATCCATGTCACTCTGGATTCTTAAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: VDIERRDWVHESLGF*PFLHPCHSGFLRER
Trigger: CCTTTCCCTTAAGAATCCAGAGTGACATGGATGGAGAAAGGGCCAGAAACCAAGACTCTCATGGACCCAGTCCCTCCTTTCTATATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS TCA 90 bp CTCAGCTGGAGTCTAATTGGCATAGAAAACAGAAGAGGCCTCTTGTaGTGTAATCTAAGAATTAGCTTTTTATGGCTGCTTTCTTGTACC +
Preference number: 5 (lower is better)
Translates to: LSWSLIGIENRRGLL*CNLRISFLWLLSCT
Trigger: GGTACAAGAAAGCAGCCATAAAAAGCTAATTCTTAGATTACATCACAAGAGGCCTCTTCTGTTTTCTATGCCAATTAGACTCCAGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 72 bp CTTGCCCGCGCAGGTAGCAGCGCCGGGGCACGCCCCTaGCTCTGCACGCTGCTATTGGGCGACCTGCCCGTC +
Preference number: 6 (lower is better)
Translates to: LARAGSSAGARP*LCTLLLGDLPV
Trigger: GACGGGCAGGTCGCCCAATAGCAGCGTGCAGAGGCAGGGGCGTGCCCCGGCGCTGCTACCTGCGCGGGCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS GCA 72 bp CAGAGAGAGGGCAGGAGGCGGGGTTCCGGCCGGCACTaGAGCCCCGAGTTTGCAGGCCGGCCGCACCCACTG +
Preference number: 6 (lower is better)
Translates to: QREGRRRGSGRH*SPEFAGRPHPL
Trigger: CAGTGGGTGCGGCCGGCCTGCAAACTCGGGGCTGCAGTGCCGGCCGGAACCCCGCCTCCTGCCCTCTCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525238.2
ENST00000527496.1
CDS GCA 72 bp GCGGGGAGACGCCTGGTGCTGAGGCCCTGTGGACTCTaGCTGACTCCACCCCCATCGGGTCGCCCGGCACCG +
Preference number: 6 (lower is better)
Translates to: AGRRLVLRPCGL*LTPPPSGRPAP
Trigger: CGGTGCCGGGCGACCCGATGGGGGTGGAGTCAGGCAGAGTCCACAGGGCCTCAGCACCAGGCGTCTCCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CAA 90 bp GAGAGGGCAGGAGGCGGGGTTCCGGCCGGCACTGCAGCCCCGAGTTaGCAGGCCGGCCGCACCCACTGCCTCTGGCTCACAGGGAGTCGT +
Preference number: 6 (lower is better)
Translates to: ERAGGGVPAGTAAPS*QAGRTHCLWLTGSR
Trigger: ACGACTCCCTGTGAGCCAGAGGCAGTGGGTGCGGCCGGCCTGCAAACTCGGGGCTGCAGTGCCGGCCGGAACCCCGCCTCCTGCCCTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525238.2
ENST00000527496.1
CDS GCA 72 bp GGCCCGGGGGTTGGCGCCGCTGAGCACGCGGACGGCTaGACGCTCCACCAGGTCTTGCAGGTACACGAAGCC +
Preference number: 6 (lower is better)
Translates to: GPGVGAAEHADG*TLHQVLQVHEA
Trigger: GGCTTCGTGTACCTGCAAGACCTGGTGGAGCGTGCAGCCGTCCGCGTGCTCAGCGGCGCCAACCCCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000533574.1
CDS GCA 72 bp CGCGCAGGTAGCAGCGCCGGGGCACGCCCCTGCCTCTaGACGCTGCTATTGGGCGACCTGCCCGTCACTCAC +
Preference number: 6 (lower is better)
Translates to: RAGSSAGARPCL*TLLLGDLPVTH
Trigger: GTGAGTGACGGGCAGGTCGCCCAATAGCAGCGTGCAGAGGCAGGGGCGTGCCCCGGCGCTGCTACCTGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS CCA 72 bp GGCACCCGTGTAGGGCAGCACCAGCACCAGCTCGTGTaGCAGCTCCTCCACCAGCCGTGCCCCGGGCACCCA +
Preference number: 6 (lower is better)
Translates to: GTRVGQHQHQLV*QLLHQPCPGHP
Trigger: TGGGTGCCCGGGGCACGGCTGGTGGAGGAGCTGCCACACGAGCTGGTGCTGGTGCTGCCCTACACGGGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 72 bp GTGGCCTGCGGGGAGACGCCTGGTGCTGAGGCCCTGTaGACTCTGCCTGACTCCACCCCCATCGGGTCGCCC +
Preference number: 6 (lower is better)
Translates to: VACGETPGAEAL*TLPDSTPIGSP
Trigger: GGGCGACCCGATGGGGGTGGAGTCAGGCAGAGTCCACAGGGCCTCAGCACCAGGCGTCTCCCCGCAGGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CAA 72 bp AGGCTGAAGACGTCTGCCGTAGGCCGGGTGCCCACGTaGTGCCACTGCGCGCCCTCGCCCTGCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RLKTSAVGRVPT*CHCAPSPCSSS
Trigger: GCTGGAGGAGCAGGGCGAGGGCGCGCAGTGGCACAACGTGGGCACCCGGCCTACGGCAGACGTCTTCAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CAA 90 bp GGCCGGCCGCACCCACTGCCTCTGGCTCACAGGGAGTCGTTGAAGTaGCTCAGGCGCCCGGGCTCCTCGCCCGGTGTCAGCTGCGGAAAG +
Preference number: 6 (lower is better)
Translates to: GRPHPLPLAHRESLK*LRRPGSSPGVSCGK
Trigger: CTTTCCGCAGCTGACACCGGGCGAGGAGCCCGGGCGCCTGAGCAACTTCAACGACTCCCTGTGAGCCAGAGGCAGTGGGTGCGGCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525238.2
ENST00000527496.1
CDS CAA 90 bp GTTGGCGCCGCTGAGCACGCGGACGGCTGCACGCTCCACCAGGTCTaGCAGGTACACGAAGCCGCCCCACACGTAGCGCAGGTCGGTCAG +
Preference number: 6 (lower is better)
Translates to: VGAAEHADGCTLHQV*QVHEAAPHVAQVGQ
Trigger: CTGACCGACCTGCGCTACGTGTGGGGCGGCTTCGTGTACCTGCAAGACCTGGTGGAGCGTGCAGCCGTCCGCGTGCTCAGCGGCGCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000533574.1
CDS TCA 72 bp GGGGACGGGACAGAGAGGTCAGGACAACGGTCGGGCTaGAGACGTGCGGTGCGGCTGCGGGCAACTCCCTGC +
Preference number: 6 (lower is better)
Translates to: GDGTERSGQRSG*RRAVRLRATPC
Trigger: GCAGGGAGTTGCCCGCAGCCGCACCGCACGTCTTCAGCCCGACCGTTGTCCTGACCTCTCTGTCCCGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525238.2
ENST00000526885.5
ENST00000527496.1
ENST00000530703.1
ENST00000531467.5
CDS TCA 72 bp GCCCAGGGCATCAGAGCCCGGCCCACCTATGGGAGGTaGGCATCACTGAACGGCCCTCCCGCACCACGGCCA +
Preference number: 6 (lower is better)
Translates to: AQGIRARPTYGR*ASLNGPPAPRP
Trigger: TGGCCGTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGGTGGGCCGGGCTCTGATGCCCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 72 bp CTGAAGACGTCTGCCGTAGGCCGGGTGCCCACGTTGTaGCACTGCGCGCCCTCGCCCTGCTCCTCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: LKTSAVGRVPTL*HCAPSPCSSSR
Trigger: TCTGCTGGAGGAGCAGGGCGAGGGCGCGCAGTGGCACAACGTGGGCACCCGGCCTACGGCAGACGTCTTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 72 bp CACGCCCCTGCCTCTGCACGCTGCTATTGGGCGACCTaGCCGTCACTCACTGGCCTGCTCCGTCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: HAPASARCYWAT*PSLTGLLRRSC
Trigger: GCAGCTCCGACGGAGCAGGCCAGTGAGTGACGGGCAGGTCGCCCAATAGCAGCGTGCAGAGGCAGGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS CCA 72 bp GTGGCGATCAGCTTCCCTAGGCCAGCCAGCGTCCTGTaGGCACTGGCCCCTCCCAGCACAGTGCGGGCATCG +
Preference number: 6 (lower is better)
Translates to: VAISFPRPASVL*ALAPPSTVRAS
Trigger: CGATGCCCGCACTGTGCTGGGAGGGGCCAGTGCCCACAGGACGCTGGCTGGCCTAGGGAAGCTGATCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
ENST00000531467.5
CDS CCA 72 bp GGCTTCAGGCGTCTCCAGAGCAGGCGGGACAGCGGGTaGCTGTCCAGGGCTCCAATCAGCTCCGAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: GFRRLQSRRDSG*LSRAPISSEQA
Trigger: CGCCTGCTCGGAGCTGATTGGAGCCCTGGACAGCCACCCGCTGTCCCGCCTGCTCTGGAGACGCCTGAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 72 bp CGTTGTACTGAGGACAGACGCCCAGGTGGGGCCGGATaGCGGCCATGCTGGAGCGGACGTCGTGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: RCTEDRRPGGAG*RPCWSGRRGPG
Trigger: TCCTGGGCCACGACGTCCGCTCCAGCATGGCCGCCATCCGGCCCCACCTGGGCGTCTGTCCTCAGTACAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 72 bp CCAGGGCACGGTGCCCGCCGATGGCAGTGGCTTGTTTaGGAAGTGGCCTGCGGGGAGACGCCTGGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PGHGARRWQWLV*EVACGETPGAE
Trigger: CTCAGCACCAGGCGTCTCCCCGCAGGCCACTTCCCAAACAAGCCACTGCCATCGGCGGGCACCGTGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CAA 72 bp TCGGCTAGCAGCCGGGAGACCAGGGAGTCGTTGAAGTaGCTCAGGCGCCCGGGCTCCTCGCCCGGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: SASSRETRESLK*LRRPGSSPGVS
Trigger: GCTGACACCGGGCGAGGAGCCCGGGCGCCTGAGCAACTTCAACGACTCCCTGGTCTCCCGGCTGCTAGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000524850.5
ENST00000526885.5
ENST00000531467.5
CDS GCA 72 bp GCTGCGAACGGAGACGCCAGGACTCAGGCCGGGCGGTaGCTCTTCTACCAGCACCTTTGGGTCCAGCGGGGT +
Preference number: 6 (lower is better)
Translates to: AANGDARTQAGR*LFYQHLWVQRG
Trigger: ACCCCGCTGGACCCAAAGGTGCTGGTAGAAGAGGCACCGCCCGGCCTGAGTCCTGGCGTCTCCGTTCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 72 bp GCAAGCAGAAAGCGCTTGAGAAGCAGGGCCTGGAGCTaGTGGCGGGTCAGTGCCCAGCCCTGTACCCGGCCC +
Preference number: 6 (lower is better)
Translates to: ASRKRLRSRAWS*WRVSAQPCTRP
Trigger: GGGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTGCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
ENST00000530092.2
CDS GCA 72 bp AGGAAGTCAGCGCGGTCCCGCCCCGACACCCTACCGTaGGCAGCAGTGACGTCAGCAGCTCCGCGACATCCA +
Preference number: 6 (lower is better)
Translates to: RKSARSRPDTLP*AAVTSAAPRHP
Trigger: TGGATGTCGCGGAGCTGCTGACGTCACTGCTGCGCACGGTAGGGTGTCGGGGCGGGACCGCGCTGACTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433129.6
ENST00000525238.2
ENST00000526885.5
CDS GCA 72 bp CCTGACTCCACCCCCATCGGGTCGCCCGGCACCGCTTaGATGCCTCCAGCGATGGAGAGCTCACTCCCATGC +
Preference number: 6 (lower is better)
Translates to: PDSTPIGSPGTA*MPPAMESSLPC
Trigger: GCATGGGAGTGAGCTCTCCATCGCTGGAGGCATGCAAGCGGTGCCGGGCGACCCGATGGGGGTGGAGTCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 72 bp GTTGAGGCTGGGCCGTGCTGCGTGCAGCCCTCAGCGTaGCGATCAGCTTCCCTAGGCCAGCCAGCGTCCTGT +
Preference number: 6 (lower is better)
Translates to: VEAGPCCVQPSA*RSASLGQPASC
Trigger: ACAGGACGCTGGCTGGCCTAGGGAAGCTGATCGCCACGCTGAGGGCTGCACGCAGCACGGCCCAGCCTCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
CDS CCA 72 bp TGCAGAGGGCCTCTGACAGCAACTCCAGGGGGCCGCTaGTCCCTCGGGGTCTCTGCAGCAGTGCCCGAAGCT +
Preference number: 6 (lower is better)
Translates to: CRGPLTATPGGR*SLGVSAAVPEA
Trigger: AGCTTCGGGCACTGCTGCAGAGACCCCGAGGGACCAGCGGCCCCCTGGAGTTGCTGTCAGAGGCCCTCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 72 bp AATCAGCTCCGAGCAGGCGGGGCTCAGGCTGCTGTCTaGCAGGGCGGATTCTGGCTCCTGCCCCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: NQLRAGGAQAAV*QGGFWLLPHQL
Trigger: GAGCTGGTGGGGCAGGAGCCAGAATCCGCCCTGCCAGACAGCAGCCTGAGCCCCGCCTGCTCGGAGCTGATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 72 bp GCCCTGGTAGAAGTCCAGGCTGAGCCCCCGCAGGGCTaGCTGCGGGCTTCCAGGAAAGCGCTTCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: ALVEVQAEPPQG*LRASRKALLQA
Trigger: AGCCTGGAGAAGCGCTTTCCTGGAAGCCCGCAGCCAGCCCTGCGGGGGCTCAGCCTGGACTTCTACCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 72 bp AGCAGAAAGCGCTTGAGAAGCAGGGCCTGGAGCTGCTaGCGGGTCAGTGCCCAGCCCTGTACCCGGCCCACG +
Preference number: 6 (lower is better)
Translates to: SRKRLRSRAWSC*RVSAQPCTRPT
Trigger: CGTGGGCCGGGTACAGGGCTGGGCACTGACCCGCCAGCAGCTCCAGGCCCTGCTTCTCAAGCGCTTTCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
ENST00000530092.2
CDS CCA 72 bp ACGGTGCCCGCCGATGGCAGTGGCTTGTTTGGGAAGTaGCCTGCGGGGAGACGCCTGGTGCTGAGGCCCTGT +
Preference number: 6 (lower is better)
Translates to: TVPADGSGLFGK*PAGRRLVLRPC
Trigger: ACAGGGCCTCAGCACCAGGCGTCTCCCCGCAGGCCACTTCCCAAACAAGCCACTGCCATCGGCGGGCACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CAA 72 bp GCTGAGCACGCGGACGGCTGCACGCTCCACCAGGTCTaGCAGGTACACGAAGCCGCCCCACACGTAGCGCAG +
Preference number: 6 (lower is better)
Translates to: AEHADGCTLHQV*QVHEAAPHVAQ
Trigger: CTGCGCTACGTGTGGGGCGGCTTCGTGTACCTGCAAGACCTGGTGGAGCGTGCAGCCGTCCGCGTGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000533574.1
CDS CAA 72 bp CACCCACTGCCTCTGGCTCACAGGGAGTCGTTGAAGTaGCTCAGGCGCCCGGGCTCCTCGCCCGGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: HPLPLAHRESLK*LRRPGSSPGVS
Trigger: GCTGACACCGGGCGAGGAGCCCGGGCGCCTGAGCAACTTCAACGACTCCCTGTGAGCCAGAGGCAGTGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525238.2
ENST00000527496.1
CDS GCA 72 bp TGTCCAAGGACAGGCACTCCGTCACTCGGCCCAGCGTaGCCACCAGGTGCCCCACATCAGCGTGTGCGTCCT +
Preference number: 6 (lower is better)
Translates to: CPRTGTPSLGPA*PPGAPHQRVRP
Trigger: AGGACGCACACGCTGATGTGGGGCACCTGGTGGGCACGCTGGGCCGAGTGACGGAGTGCCTGTCCTTGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 72 bp ACTCCACCCCCATCGGGTCGCCCGGCACCGCTTGCATaGCTCCAGCGATGGAGAGCTCACTCCCATGCCATG +
Preference number: 6 (lower is better)
Translates to: TPPPSGRPAPLA*LQRWRAHSHAM
Trigger: CATGGCATGGGAGTGAGCTCTCCATCGCTGGAGGCATGCAAGCGGTGCCGGGCGACCCGATGGGGGTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 72 bp GCTCCGCCAGCCGCGTGTCTAGCTCTCGGAAGAGTGTaGCGAAGCTGCCGTCATGGGCACCCGTGTAGGGCA +
Preference number: 6 (lower is better)
Translates to: APPAACLALGRV*RSCRHGHPCRA
Trigger: TGCCCTACACGGGTGCCCATGACGGCAGCTTCGCCACACTCTTCCGAGAGCTAGACACGCGGCTGGCGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 72 bp GGTTGGTTGAGGCCGTGCTGCGTGCAGCCCTCAGCGTaGCGATCAGCTTCCCTAGGCCAGCCAGCGTCCTGT +
Preference number: 6 (lower is better)
Translates to: GWLRPCCVQPSA*RSASLGQPASC
Trigger: ACAGGACGCTGGCTGGCCTAGGGAAGCTGATCGCCACGCTGAGGGCTGCACGCAGCACGGCCTCAACCAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS TCA 72 bp TCTCCTCGAGGCTGGTGTCGGAGATCCCGTAGCCAGTaGGCCTCAGCTCCGCCAGCCGCGTGTCTAGCTCTC +
Preference number: 6 (lower is better)
Translates to: SPRGWCRRSRSQ*ASAPPAACLAL
Trigger: GAGAGCTAGACACGCGGCTGGCGGAGCTGAGGCTCACTGGCTACGGGATCTCCGACACCAGCCTCGAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS TCA 72 bp GGGTCCCCTGGGGCGTCCTCACTGAAGAAGGACACCTaGGCACCGTACATGGTGGGACTGAGCCGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: GSPGASSLKKDT*APYMVGLSRRA
Trigger: GGCTCTGCGGCTCAGTCCCACCATGTACGGTGCTCAGGTGTCCTTCTTCAGTGAGGACGCCCCAGGGGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000435683.7
CDS TCA 72 bp CTGCTCAAGGGTGGGAGACGGATGTTGGTCAGGGGCTaGGTCCAACGACCCAACCCAGCCCAAGCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LLKGGRRMLVRG*VQRPNPAQAPA
Trigger: GGCTGGGGCTTGGGCTGGGTTGGGTCGTTGGACTCAGCCCCTGACCAACATCCGTCTCCCACCCTTGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 72 bp GACAGAGAGGTCAGGACAACGGTCGGGCTGAAGACGTaGGGTGCGGCTGCGGGCAACTCCCTGCCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: DREVRTTVGLKT*GAAAGNSLPLS
Trigger: AGAAAGGGGCAGGGAGTTGCCCGCAGCCGCACCGCACGTCTTCAGCCCGACCGTTGTCCTGACCTCTCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525238.2
ENST00000526885.5
ENST00000527496.1
ENST00000530703.1
ENST00000531467.5
CDS GCA 72 bp GAGGATGTCTCCCAGCTTGAGCACCAGAACCAGCAGTaGGGCGCTGAGCAGGAAGGGCCCGAGGCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: EDVSQLEHQNQQ*GAEQEGPEAAE
Trigger: CTCAGCTGCCTCGGGCCCTTCCTGCTCAGCGCCGCACTGCTGGTTCTGGTGCTCAAGCTGGGAGACATCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 72 bp CAGGAAGCTCTGGGTCACCGTGGCCACCGCGAAGGCTaGCAAGAACAGGAAGACCACGCCCGGGTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: QEALGHRGHREG*QEQEDHARVAV
Trigger: TACAGCCACCCGGGCGTGGTCTTCCTGTTCTTGGCAGCCTTCGCGGTGGCCACGGTGACCCAGAGCTTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000533574.1
CDS GCA 72 bp TTGGAGACCAGCCCCACATCCTGCAGCAGACGGTCCTaGTCGGGGCCCACTACAGCGGCACTCAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: LETSPTSCSRRS*SGPTTAALRPF
Trigger: GAAGGGTCTGAGTGCCGCTGTAGTGGGCCCCGAGCAGGACCGTCTGCTGCAGGATGTGGGGCTGGTCTCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS GCA 72 bp GTCTGCACACTCTGCTTGGAGACCAGCCCCACATCCTaGAGCAGACGGTCCTGCTCGGGGCCCACTACAGCG +
Preference number: 6 (lower is better)
Translates to: VCTLCLETSPTS*SRRSCSGPTTA
Trigger: CGCTGTAGTGGGCCCCGAGCAGGACCGTCTGCTGCAGGATGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS GCA 72 bp GCCGCGTGTCTAGCTCTCGGAAGAGTGTGGCGAAGCTaGCGTCATGGGCACCCGTGTAGGGCAGCACCAGCA +
Preference number: 6 (lower is better)
Translates to: AACLALGRVWRS*RHGHPCRAAPA
Trigger: TGCTGGTGCTGCCCTACACGGGTGCCCATGACGGCAGCTTCGCCACACTCTTCCGAGAGCTAGACACGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS CCA 72 bp TCCTCAGCGGCCTCCAACAAGCTGTGCAAGGGCTCCTaGGCTTGGCCCAGTGCCAACCCCAGGGATTCCGTG +
Preference number: 6 (lower is better)
Translates to: SSAASNKLCKGS*AWPSANPRDSV
Trigger: CACGGAATCCCTGGGGTTGGCACTGGGCCAAGCCCAGGAGCCCTTGCACAGCTTGTTGGAGGCCGCTGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263094.11
CDS CCA 72 bp TCCTCAGCGGCCTCCAACAAGCTGTGCAAGGGCTCCTaGGCTTGGCCCAGTGCCAACCCCAGGGATTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSAASNKLCKGS*AWPSANPRDSW
Trigger: CCAGGAATCCCTGGGGTTGGCACTGGGCCAAGCCCAGGAGCCCTTGCACAGCTTGTTGGAGGCCGCTGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS CCA 72 bp TCGGGTCGCCCGGCACCGCTTGCATGCCTCCAGCGATaGAGAGCTCACTCCCATGCCATGTATTGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: SGRPAPLACLQR*RAHSHAMYWRP
Trigger: AGGCCGCCAATACATGGCATGGGAGTGAGCTCTCCATCGCTGGAGGCATGCAAGCGGTGCCGGGCGACCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 72 bp CCACACGTAGCGCAGGTCGGTCAGGGGGTCCGCGGCTaGGCCAGGGTCCCAAAACCTGTCCTCAAGAGATTC +
Preference number: 6 (lower is better)
Translates to: PHVAQVGQGVRG*ARVPKPVLKRF
Trigger: GAATCTCTTGAGGACAGGTTTTGGGACCCTGGCCCAGCCGCGGACCCCCTGACCGACCTGCGCTACGTGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533574.1
CDS CAA 72 bp TGGAGCCAGGGCACGGTGCCCGCCGATGGCAGTGGCTaGTTTGGGAAGTGGCATTCATGGTGCTCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: WSQGTVPADGSG*FGKWHSWCSRG
Trigger: GCCCCTGGAGCACCATGAATGCCACTTCCCAAACAAGCCACTGCCATCGGCGGGCACCGTGCCCTGGCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000524850.5
ENST00000526885.5
ENST00000527496.1
ENST00000531467.5
CDS TCA 72 bp TCAGAGCCCGGCCCACCTATGGGAGGTGAGCATCACTaGACGGCCCTCCCGCACCACGGCCAAAAGGCTGTT +
Preference number: 6 (lower is better)
Translates to: SEPGPPMGGEHH*TALPHHGQKAV
Trigger: AACAGCCTTTTGGCCGTGGTGCGGGAGGGCCGTTCAGTGATGCTCACCTCCCATAGGTGGGCCGGGCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 72 bp CTCAGGCTGCTGTCTGGCAGGGCGGATTCTGGCTCCTaGCCCACCAGCTCCATCAGGTCACTAGCCTCGTAC +
Preference number: 6 (lower is better)
Translates to: LRLLSGRADSGS*PTSSIRSLASY
Trigger: GTACGAGGCTAGTGACCTGATGGAGCTGGTGGGGCAGGAGCCAGAATCCGCCCTGCCAGACAGCAGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 72 bp CGACATCCAGCATGGGTGGTTCCAGTGGAGACTGCTTaGTTGGTTGAGGCTGGGCCGTGCTGCGTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: RHPAWVVPVETA*LVEAGPCCVQP
Trigger: GGGCTGCACGCAGCACGGCCCAGCCTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGATGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
CDS CAA 72 bp CCCACCAGCTCCATCAGGTCACTAGCCTCGTACCAGTaGAGGGAGGGGCCCACTGTGCTGCTAGGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: PTSSIRSLASYQ*REGPTVLLGPL
Trigger: CAGGGGACCTAGCAGCACAGTGGGCCCCTCCCTCAACTGGTACGAGGCTAGTGACCTGATGGAGCTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 72 bp TGCATCCCACCAGAGAGGTGGCGAGTCTGCACACTCTaGTTGGAGACCAGCCCCACATCCTGCAGCAGACGG +
Preference number: 6 (lower is better)
Translates to: CIPPERWRVCTL*LETSPTSCSRR
Trigger: CCGTCTGCTGCAGGATGTGGGGCTGGTCTCCAAGCAGAGTGTGCAGACTCGCCACCTCTCTGGTGGGATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS GCA 72 bp GCCATGTATTGGCGGCCTGGTGAAGGCTCCCTGACATaGACGGGGGATTCCTGTGCACGGGTGAGCCATCTG +
Preference number: 6 (lower is better)
Translates to: AMYWRPGEGSLT*TGDSCARVSHL
Trigger: CAGATGGCTCACCCGTGCACAGGAATCCCCCGTGCATGTCAGGGAGCCTTCACCAGGCCGCCAATACATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 72 bp ATCCAGCATGGGTGGTTCCAGTGGAGACTGCTTGGTTaGTTGAGGCTGGGCCGTGCTGCGTGCAGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: IQHGWFQWRLLG*LRLGRAACSPQ
Trigger: CTGAGGGCTGCACGCAGCACGGCCCAGCCTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
CDS CCA 72 bp CGACATCCAGCATGGGTGGTTCCAGTGGAGACTGCTTaGTTGGTTGAGGCCGTGCTGCGTGCAGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: RHPAWVVPVETA*LVEAVLRAALS
Trigger: GCTGAGGGCTGCACGCAGCACGGCCTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGATGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433129.6
CDS CCA 72 bp CTCCAGCGATGGAGAGCTCACTCCCATGCCATGTATTaGCGGCCTGGTGAAGGCTCCCTGACATGCACGGGG +
Preference number: 6 (lower is better)
Translates to: LQRWRAHSHAMY*RPGEGSLTCTG
Trigger: CCCCGTGCATGTCAGGGAGCCTTCACCAGGCCGCCAATACATGGCATGGGAGTGAGCTCTCCATCGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 72 bp TCCTGCAGCTTCTGCTCAAGGGTGGGAGACGGATGTTaGTCAGGGGCTGAGTCCAACGACCCAACCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SCSFCSRVGDGC*SGAESNDPTQP
Trigger: GGGCTGGGTTGGGTCGTTGGACTCAGCCCCTGACCAACATCCGTCTCCCACCCTTGAGCAGAAGCTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CAA 72 bp CATCCAGCATGGGTGGTTCCAGTGGAGACTGCTTGGTaGGTTGAGGCTGGGCCGTGCTGCGTGCAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: HPAWVVPVETAW*VEAGPCCVQPS
Trigger: TGAGGGCTGCACGCAGCACGGCCCAGCCTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
CDS CAA 90 bp CCAGCTGGTTCCCCGTTCTCCAGCGCTGTCTCCTGTGGCGGCATCTaGAGCCGTAGGGTTACGTCTAGGCCAGCAATGCCTGTGCATAGG +
Preference number: 6 (lower is better)
Translates to: PAGSPFSSAVSCGGI*SRRVTSRPAMPVHR
Trigger: CCTATGCACAGGCATTGCTGGCCTAGACGTAACCCTACGGCTCAAGATGCCGCCACAGGAGACAGCGCTGGAGAACGGGGAACCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS TCA 72 bp TGGGACCTTGCGGCGGGCACCCGCAGGGTCAGTGTGTaGCCCGCCGCGAATCACCATGTCCAGCTAATTTTT +
Preference number: 6 (lower is better)
Translates to: WDLAAGTRRVSV*PAANHHVQLIF
Trigger: AAAAATTAGCTGGACATGGTGATTCGCGGCGGGTCACACACTGACCCTGCGGGTGCCCGCCGCAAGGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524383.1
CDS TCA 72 bp GAGAGCTCACTCCCATGCCATGTATTGGCGGCCTGGTaGAGGCTCCCTGACATGCACGGGGGATTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: ESSLPCHVLAAW*RLPDMHGGFLC
Trigger: GCACAGGAATCCCCCGTGCATGTCAGGGAGCCTTCACCAGGCCGCCAATACATGGCATGGGAGTGAGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525238.2
CDS CCA 72 bp GACGAGTCTTCCTCACTGGGTCAGACACACTCTGTCTaGGGGCCCAGACGGACAAGCAGCATCACCGCAGAG +
Preference number: 6 (lower is better)
Translates to: DESSSLGQTHSV*GPRRTSSITAE
Trigger: CTCTGCGGTGATGCTGCTTGTCCGTCTGGGCCCCCAGACAGAGTGTGTCTGACCCAGTGAGGAAGACTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433129.6
ENST00000526885.5
CDS CCA 72 bp CTGTGGCCTTGTGCTTTGGGGCTCTCTCTCCAGGCCTaGATCACCTTAACCACAGCCCAGGGCATCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LWPCALGLSLQA*ITLTTAQGIRA
Trigger: GGCTCTGATGCCCTGGGCTGTGGTTAAGGTGATCCAGGCCTGGAGAGAGAGCCCCAAAGCACAAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CAA 72 bp TTGGTCCTCGTGACCACGTCAATGTCCATGCGGATTTaGATGCGCACGTGGCCGGGGCCCAGGTCTGGGGTT +
Preference number: 6 (lower is better)
Translates to: LVLVTTSMSMRI*MRTWPGPRSGV
Trigger: AACCCCAGACCTGGGCCCCGGCCACGTGCGCATCAAAATCCGCATGGACATTGACGTGGTCACGAGGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CAA 90 bp GCTGGGGATGGAGACTCTGGGGTCCAGTTGCCACTGGCCAAGACCTaGGCCACTTCAGCAGGAACTTCTGGTGCCGAGAACCTGCAGACA +
Preference number: 6 (lower is better)
Translates to: AGDGDSGVQLPLAKT*ATSAGTSGAENLQT
Trigger: TGTCTGCAGGTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGACCCCAGAGTCTCCATCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS GCA 72 bp TTGCTCAGGCGCCCGGGCTCCTCGCCCGGTGTCAGCTaGGGAAAGCAGGTGTTGTTCACATTACAGATGAGA +
Preference number: 6 (lower is better)
Translates to: LLRRPGSSPGVS*GKQVLFTLQMR
Trigger: TCTCATCTGTAATGTGAACAACACCTGCTTTCCGCAGCTGACACCGGGCGAGGAGCCCGGGCGCCTGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
ENST00000527496.1
ENST00000531467.5
CDS GCA 72 bp TTGCCGACCACCTCCCAGCGCAGGGGTGACTGGAACTaGCTGTCTCCTGTGGATATAGAAAGGAGGGACTGG +
Preference number: 6 (lower is better)
Translates to: LPTTSQRRGDWN*LSPVDIERRDW
Trigger: CCAGTCCCTCCTTTCTATATCCACAGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CCA 72 bp GCAGCAGTGACGTCAGCAGCTCCGCGACATCCAGCATaGGTGGTTCCAGTGGAGACTGCTTGGTTGGTTGAG +
Preference number: 6 (lower is better)
Translates to: AAVTSAAPRHPA*VVPVETAWLVE
Trigger: CTCAACCAACCAAGCAGTCTCCACTGGAACCACCCATGCTGGATGTCGCGGAGCTGCTGACGTCACTGCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525238.2
ENST00000526885.5
CDS TCA 72 bp CGACCAGGAGCTGGACCGGCTGTCTCCGGCGATACATaGAATTCTTCCAGAGCAGCAGCATCAGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: RPGAGPAVSGDT*NSSRAAASAVS
Trigger: GGACACAGCTGATGCTGCTGCTCTGGAAGAATTTCATGTATCGCCGGAGACAGCCGGTCCAGCTCCTGGTCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000524850.5
ENST00000525238.2
ENST00000526885.5
ENST00000527496.1
CDS GCA 72 bp AGGGTTACGTCTAGGCCAGCAATGCCTGTGCATAGGTaGTGCCCGCAGCTGCCATCCTCCATATCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: RVTSRPAMPVHR*CPQLPSSISVS
Trigger: GGACACAGATATGGAGGATGGCAGCTGCGGGCAGCACCTATGCACAGGCATTGCTGGCCTAGACGTAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000435683.7
CDS GCA 72 bp TGGCCACTTCAGCAGGAACTTCTGGTGCCGAGAACCTaGAGACAATGGGCTGTGGGAGCTATGCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: WPLQQELLVPRT*RQWAVGAMLHW
Trigger: CCAGTGCAGCATAGCTCCCACAGCCCATTGTCTGCAGGTTCTCGGCACCAGAAGTTCCTGCTGAAGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435683.7
CDS GCA 72 bp ACCTGTTTCAAGATCCGGCTCACCTCCTGCAGCTTCTaGTCAAGGGTGGGAGACGGATGTTGGTCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: TCFKIRLTSCSF*SRVGDGCWSGA
Trigger: AGCCCCTGACCAACATCCGTCTCCCACCCTTGAGCAGAAGCTGCAGGAGGTGAGCCGGATCTTGAAACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CCA 72 bp AGGTTCTTGCCGACCACCTCCCAGCGCAGGGGTGACTaGAACTGCCTGTCTCCTGTGGATATAGAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: RFLPTTSQRRGD*NCLSPVDIERR
Trigger: CCTCCTTTCTATATCCACAGGAGACAGGCAGTTCCAGTCACCCCTGCGCTGGGAGGTGGTCGGCAAGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS TCA 72 bp CACACTGGGGCGTTACCGGCTGTCTCCGGCGATACATaGAATTCTTCCAGAGCAGCAGCATCAGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: HTGALPAVSGDT*NSSRAAASAVS
Trigger: GGACACAGCTGATGCTGCTGCTCTGGAAGAATTTCATGTATCGCCGGAGACAGCCGGTAACGCCCCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530703.1
CDS TCA 72 bp CCAAGGGTGCTAGCTATCTGTAGCCATGGCCCCACCTaGCAGGAAGTTCTCACCCAAGCGCTCAAAGGCATC +
Preference number: 6 (lower is better)
Translates to: PRVLAICSHGPT*QEVLTQALKGI
Trigger: GATGCCTTTGAGCGCTTGGGTGAGAACTTCCTGTCAGGTGGGGCCATGGCTACAGATAGCTAGCACCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CCA 72 bp TCCGCACCAGTAGCTCCTCCGAAAAGGAAAATTCCATaGTTCAGGGATCCCGTACTGGCCTGGGCACACAGC +
Preference number: 6 (lower is better)
Translates to: SAPVAPPKRKIP*FRDPVLAWAHS
Trigger: GCTGTGTGCCCAGGCCAGTACGGGATCCCTGAACCATGGAATTTTCCTTTTCGGAGGAGCTACTGGTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS CCA 72 bp GACTCATTGGAGATCTCACAGACGAGTCTTCCTCACTaGGTCAGACACACTCTGTCTGGGGGCCCAGACGGA +
Preference number: 6 (lower is better)
Translates to: DSLEISQTSLPH*VRHTLSGGPDG
Trigger: TCCGTCTGGGCCCCCAGACAGAGTGTGTCTGACCCAGTGAGGAAGACTCGTCTGTGAGATCTCCAATGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433129.6
ENST00000526885.5
CDS TCA 72 bp GCAATTCGACCAGGAGCGGCTGTCTCCGGCGATACATaGAATTCTTCCAGAGCAGCAGCATCAGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: AIRPGAAVSGDT*NSSRAAASAVS
Trigger: GGACACAGCTGATGCTGCTGCTCTGGAAGAATTTCATGTATCGCCGGAGACAGCCGCTCCTGGTCGAATTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531467.5
CDS CAA 72 bp GCTGGGCCAGGGTCCCAAAACCTGTCCCTGATCTTATaGGTCCTCGTGACCACGTCAATGTCCATGCGGATT +
Preference number: 6 (lower is better)
Translates to: AGPGSQNLSLIL*VLVTTSMSMRI
Trigger: AATCCGCATGGACATTGACGTGGTCACGAGGACCAATAAGATCAGGGACAGGTTTTGGGACCCTGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263094.11
ENST00000433129.6
CDS GCA 72 bp ATAAGGAAGACCTGTTTCAAGATCCGGCTCACCTCCTaGAGCTTCTGCTCAAGGGTGGGAGACGGATGTTGG +
Preference number: 6 (lower is better)
Translates to: IRKTCFKIRLTS*SFCSRVGDGCW
Trigger: CCAACATCCGTCTCCCACCCTTGAGCAGAAGCTGCAGGAGGTGAGCCGGATCTTGAAACAGGTCTTCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS GCA 72 bp CTGCTGGAAGGCCAGAAAGATGAGCACCACGATGCATaGTGGCACCAAGTAGTTACACATGTCCCAGAGAAA +
Preference number: 6 (lower is better)
Translates to: LLEGQKDEHHDA*WHQVVTHVPEK
Trigger: TTTCTCTGGGACATGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525073.6
ENST00000529442.7
CDS CCA 72 bp AACTGCCTGTCTCCTGTGGATATAGAAAGGAGGGACTaGGTCCATGAGAGTCTTGGTTTCTGGCCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: NCLSPVDIERRD*VHESLGFWPFL
Trigger: GAGAAAGGGCCAGAAACCAAGACTCTCATGGACCCAGTCCCTCCTTTCTATATCCACAGGAGACAGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS CCA 72 bp CTGGAAGGCCAGAAAGATGAGCACCACGATGCATGCTaGCACCAAGTAGTTACACATGTCCCAGAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: LEGQKDEHHDAC*HQVVTHVPEKV
Trigger: AACTTTCTCTGGGACATGTGTAACTACTTGGTGCCAGCATGCATCGTGGTGCTCATCTTTCTGGCCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263094.11
ENST00000433129.6
ENST00000525073.6
ENST00000529442.7
CDS CAA 90 bp AATTGGATCACACACGGCATCACCTCAGACCTCCATATCCTCTCCTaGGGAGTCACTGCAGAGTTCTATCTCAGCAGCATTAATGTGGAA +
Preference number: 6 (lower is better)
Translates to: NWITHGITSDLHILS*GVTAEFYLSSINVE
Trigger: TTCCACATTAATGCTGCTGAGATAGAACTCTGCAGTGACTCCCAAGGAGAGGATATGGAGGTCTGAGGTGATGCCGTGTGTGATCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS TCA 72 bp AGGGACAATAGGAGTCACTGGAGTAACCACTCAGACTaGGAAGCCCTGAGAGGAATAAAAATCTCCATTCCC +
Preference number: 6 (lower is better)
Translates to: RDNRSHWSNHSD*EALRGIKISIP
Trigger: GGGAATGGAGATTTTTATTCCTCTCAGGGCTTCTCAGTCTGAGTGGTTACTCCAGTGACTCCTATTGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673773.1
CDS TCA 72 bp AGTCTAATTGGCATAGAAAACAGAAGAGGCCTCTTGTaGTGTAATCTAAGAATTAGCTTTTTATGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SLIGIENRRGLL*CNLRISFLWLL
Trigger: AAGCAGCCATAAAAAGCTAATTCTTAGATTACATCACAAGAGGCCTCTTCTGTTTTCTATGCCAATTAGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673773.1