RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000167972

Ensembl transcript IDs: ENST00000301732.10, ENST00000382381.7, ENST00000563623.5, ENST00000566200.1, ENST00000567910.1, ENST00000569062.1

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTaGCTACCATGCCCTAAGGAGCAGAGCCTCCAGGATGCCCCCGGG +
Preference number: 1 (lower is better)
Translates to: RLLLGDAVGRCPASR*LPCPKEQSLQDAPG
Trigger: CCCGGGGGCATCCTGGAGGCTCTGCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR TCA 90 bp CAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTaGGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAGCCTGGCCAC +
Preference number: 1 (lower is better)
Translates to: QPLGWSLRVLGRATS*GCSAGNRDCFEPGH
Trigger: GTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTaGTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: VVPACPGAGDFLRVQ*WKQRLLRAWPPSLL
Trigger: CAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 90 bp GTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTaGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGC +
Preference number: 1 (lower is better)
Translates to: VPACPGAGDFLRVQC*KQRLLRAWPPSLLC
Trigger: GCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR GCA 90 bp TGCTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTaGCGGCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCG +
Preference number: 1 (lower is better)
Translates to: CWKQRLLRAWPPSLL*RLLLGDAVGRCPAS
Trigger: CGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 90 bp CCATGCCCTAAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTaGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCT +
Preference number: 1 (lower is better)
Translates to: PCPKEQSLQDAPGLR*TLRPQHLITVSSFP
Trigger: AGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTTAGGGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 90 bp CTTCCCTCCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTaGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: LPSTDSDLHGPFLAA*GPRYSSTWLASRFL
Trigger: GAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGGAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 90 bp GTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATTCCTaGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: VSSFPPLTVICMVHS*RPGGLATVQPGWLP
Trigger: GGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR TCA 90 bp GGAGCTTGCCCGCAGACTGCCCGGCCTGCCCCAGCTCTGGGAAAGTaGACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTG +
Preference number: 1 (lower is better)
Translates to: GACPQTARPAPALGK*TPEYADMEMRMLIL
Trigger: CAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCCGGGCAGTCTGCGGGCAAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR GCA 90 bp GACTGCCCGGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATaGAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: DCPACPSSGKVNSRV*RHGDAHADPGHEGW
Trigger: CCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCCGGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR GCA 90 bp CAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTaGATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAA +
Preference number: 1 (lower is better)
Translates to: QHLITVSSFPPLTVI*MVHSWRPGGLATVQ
Trigger: TTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR TCA 90 bp TCAGCATTTATTTTCTGGATGGTCACAACGTATTCAATGTGTCCTTaGGACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGG +
Preference number: 1 (lower is better)
Translates to: SAFIFWMVTTYSMCP*DSHPALRVVPACPG
Trigger: CCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGTCTCAAGGACACATTGAATACGTTGTGACCATCCAGAAAATAAATGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 90 bp GTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTaGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCA +
Preference number: 1 (lower is better)
Translates to: VCRHGDAHADPGHEG*AALVHSVHTALNFS
Trigger: TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGTGCATGGTCCATTCCTaGCGGCCTGGGGGCCTCGCT +
Preference number: 2 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQCMVHS*RPGGLA
Trigger: AGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCA...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGAAGATGGGCCCTGCTTaGCCGTCCTGTCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQKMGPA*PSCPCL
Trigger: CAGGCAGGGACAGGACGGGCAAGCAGGGCCCATCTT...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAAACCCCCAGCTCAGCTaGAGCCCTTCCTGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKNPQLS*SPSWVS
Trigger: GCTGACCCAGGAAGGGCTGCAGCTGAGCTGGGGGTT...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCTGCATGGTCCATTCCTaGCGGCCTGGGGGCCTCGCT +
Preference number: 2 (lower is better)
Translates to: EMLWDGARLRGDYHALRSCMVHS*RPGGLA
Trigger: AGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCA...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACCTGGGCATGAGGGCTaGGCTGCACTCGTCCATTCT +
Preference number: 2 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKPGHEG*AALVHS
Trigger: AGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGG...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCAAGATGGGCCCTGCTTaGCCGTCCTGTCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFKMGPA*PSCPCL
Trigger: CAGGCAGGGACAGGACGGGCAAGCAGGGCCCATCTT...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACCACCTTCCCTCCTGTaGCGGCTGCTTCTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKPPSLL*RLLLGD
Trigger: ATCTCCTAGAAGCAGCCGGCACAGGAGGGAAGGTGG...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAGAGACCCCGGAGCTTaGCCGCAGACTGCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVRDPGA*PQTARP
Trigger: AGGCCGGGCAGTCTGCGGGCAAGCTCCGGGGTCTCT...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCGTGAACTCCAGAGTATaGAGACATGGAGATGCGCAT +
Preference number: 2 (lower is better)
Translates to: TATQPLGWSLRVLGRATSVNSRV*RHGDAH
Trigger: ATGCGCATCTCCATGTCTGCATACTCTGGAGTTCAC...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR TCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATCGTCCTGTCCCTGCCTaGTGGCGAGACAGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHRPVPA*WRDSRH
Trigger: GTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACG...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR TCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCCGTCCTGTCCCTGCCTaGTGGCGAGACAGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLRPVPA*WRDSRH
Trigger: GTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACG...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATAGAGACCCCGGAGCTTaGCCGCAGACTGCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHRDPGA*PQTARP
Trigger: AGGCCGGGCAGTCTGCGGGCAAGCTCCGGGGTCTCT...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAAGAGAGGATGTAAGATaGGCCCTGCTTGCCCGTCCT +
Preference number: 2 (lower is better)
Translates to: PLTVICMVHSWRPGGLATREDVR*ALLARP
Trigger: AGGACGGGCAAGCAGGGCCCATCTTACATCCTCTCT...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTAGCTGCAGCCCTTCCTaGGTCAGCTCTCCACCCAGA +
Preference number: 2 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTSCSPS*VSSPPR
Trigger: TCTGGGTGGAGAGCTGACCCAGGAAGGGCTGCAGCT...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTTCTCCAGGGAGTGCCTaGAGAAATTCAACCCCCAGC +
Preference number: 2 (lower is better)
Translates to: GLATVQPGWLPASSPGEISPGSA*RNSTPS
Trigger: GCTGGGGGTTGAATTTCTCCAGGCACTCCCTGGAGA...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCCCGTCCTGTCCCTaGCTGATGGCGAGACAGCCG +
Preference number: 2 (lower is better)
Translates to: LRPQHLITVSSFPPLTVICPSCP*LMARQP
Trigger: CGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATTGCCCGTCCTGTCCCTaGCTGATGGCGAGACAGCCG +
Preference number: 2 (lower is better)
Translates to: HLITVSSFPPLTVICMVHCPSCP*LMARQP
Trigger: CGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCA...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAAACCCCCAGCTCAGCTaGAGCCCTTCCTGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPNPQLS*SPSWVS
Trigger: GCTGACCCAGGAAGGGCTGCAGCTGAGCTGGGGGTT...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCCCATTCCTGGCGGCCTaGGGGCCTCGCTACAGTTCA +
Preference number: 2 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIPFLAA*GPRYSS
Trigger: TGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGG...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CAA 90 bp GGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTaGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: GFPLPPQGRLVSCVN*DKSLGPLSRECLEK
Trigger: TTTCTCCAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGTGAACTCCAGAGTATaGAGACATGGAGATGCGCAT +
Preference number: 2 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTVNSRV*RHGDAH
Trigger: ATGCGCATCTCCATGTCTGCATACTCTGGAGTTCAC...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCAGAGAGGATGTAAGATaGGCCCTGCTTGCCCGTCCT +
Preference number: 2 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLREDVR*ALLARP
Trigger: AGGACGGGCAAGCAGGGCCCATCTTACATCCTCTCT...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR TCA 90 bp ATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAGGGGCTGCCCCCATATaGCTGTCACTAGTCAACAGC +
Preference number: 2 (lower is better)
Translates to: IAALFTTAKTWNQAKCPEGAAPI*LSLVNS
Trigger: GCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCC...TTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
3UTR-3UTR GCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGCCATTCTGTGCATACTaGCTTGAATTTTTCATATCC +
Preference number: 2 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRPFCAY*LEFFIS
Trigger: GGATATGAAAAATTCAAGGCAGTATGCACAGAATGG...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR GCA 90 bp ATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTTTTGCAAAGTGGGGCTaGCCCCATATGACTGTCACT +
Preference number: 2 (lower is better)
Translates to: MFIAALFTTAKTWNQAKCFAKWG*PHMTVT
Trigger: AGTGACAGTCATATGGGGGCAGCCCCACTTTGCAAA...ACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567910.1
3UTR-3UTR CCA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTAATACTTTTGCAAAGTaGGGCTGCCCCCATATGACT +
Preference number: 2 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPNTFAK*GCPHMT
Trigger: AGTCATATGGGGGCAGCCCCACTTTGCAAAAGTATT...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
3UTR GCA 72 bp GCCACCTTCCCTCCTGTGCCGGCTGCTTCTAGGAGATaGTGTGGGACGGTGCCCGGCTTCGCGGTGACTACC +
Preference number: 3 (lower is better)
Translates to: ATFPPVPAASRR*CGTVPGFAVTT
Trigger: GGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGCCGGCACAGGAGGGAAGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR TCA 72 bp GGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTaGGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAG +
Preference number: 3 (lower is better)
Translates to: GWSLRVLGRATS*GCSAGNRDCFE
Trigger: CTCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR GCA 72 bp GCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTaGTGGAAACAGAGACTGCTTCGAGCCTGGCCACCT +
Preference number: 3 (lower is better)
Translates to: ACPGAGDFLRVQ*WKQRLLRAWPP
Trigger: AGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CAA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCAGAGACCCCGGAGCTaGCCCGCAGACTGCCCGGCC +
Preference number: 3 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLQRPRS*PADCPA
Trigger: GGCCGGGCAGTCTGCGGGCAAGCTCCGGGGTCTCTG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 72 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTaGACGCTAAGACCCCAGCACCTAATCACAGTCAGC +
Preference number: 3 (lower is better)
Translates to: KEQSLQDAPGLR*TLRPQHLITVS
Trigger: GCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR TCA 72 bp CTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTaGCTACCATGCCCTAAGGAGCAGAGCCTCCAGGAT +
Preference number: 3 (lower is better)
Translates to: LGDAVGRCPASR*LPCPKEQSLQD
Trigger: ATCCTGGAGGCTCTGCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CAA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATCAGAGACCCCGGAGCTaGCCCGCAGACTGCCCGGCC +
Preference number: 3 (lower is better)
Translates to: HLITVSSFPPLTVICMVHQRPRS*PADCPA
Trigger: GGCCGGGCAGTCTGCGGGCAAGCTCCGGGGTCTCTG...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR TCA 72 bp CCGCAGACTGCCCGGCCTGCCCCAGCTCTGGGAAAGTaGACTCCAGAGTATGCAGACATGGAGATGCGCATG +
Preference number: 3 (lower is better)
Translates to: PQTARPAPALGK*TPEYADMEMRM
Trigger: CATGCGCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCCGGGCAGTCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR GCA 72 bp ATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTaGATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCT +
Preference number: 3 (lower is better)
Translates to: ITVSSFPPLTVI*MVHSWRPGGLA
Trigger: AGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 72 bp ACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTaGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: TDSDLHGPFLAA*GPRYSSTWLAS
Trigger: GGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 72 bp TTCCCTCCACTGACAGTGATCTGCATGGTCCATTCCTaGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGC +
Preference number: 3 (lower is better)
Translates to: FPPLTVICMVHS*RPGGLATVQPG
Trigger: GCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGGAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CCA 72 bp CATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTaGGCTGCACTCGTCCATTCTGTGCATACTGCCTTG +
Preference number: 3 (lower is better)
Translates to: HGDAHADPGHEG*AALVHSVHTAL
Trigger: CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR GCA 72 bp GCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATaGAGACATGGAGATGCGCATGCTGATCCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: ACPSSGKVNSRV*RHGDAHADPGH
Trigger: ATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR TCA 72 bp ATTTTCTGGATGGTCACAACGTATTCAATGTGTCCTTaGGACAGCCACCCAGCCCTTAGGGTGGTCCCTGCG +
Preference number: 3 (lower is better)
Translates to: IFWMVTTYSMCP*DSHPALRVVPA
Trigger: CGCAGGGACCACCCTAAGGGCTGGGTGGCTGTCTCAAGGACACATTGAATACGTTGTGACCATCCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR-3UTR CAA 90 bp GTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCCTTCAAGAAATACTTTaGCAAAGTGGGGCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: VYCGTIHNSKDLEPSQMSLQEIL*QSGAAP
Trigger: GGGGGCAGCCCCACTTTGCAAAAGTATTTCTTGAAG...GGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
3UTR CCA 72 bp ATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTaGAACCAAGCCAAATGTCCTGAAAAGTATTTCTTC +
Preference number: 3 (lower is better)
Translates to: MFIAALFTTAKT*NQAKCPEKYFF
Trigger: GAAGAAATACTTTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCGCCCCCGGGCTGCGCTaGACGCTAAGACCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPAPGLR*TLRPQH
Trigger: GTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGC...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCCCAGGAGGGCCAGGGTaGCGCAGGTCAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSPGGPG*RRSEAP
Trigger: TGGTGCCTCTGACCTGCGTCACCCTGGCCCTCCTGG...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCCCACAGCCCAGTCGCTaGCGCGCCTCTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSPQPSR*RASRAG
Trigger: ACCAGCACGAGAGGCGCGCCAGCGACTGGGCTGTGG...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGGCCCCCGGGCTGCGCTaGACGCTAAGACCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQAPGLR*TLRPQH
Trigger: GTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGC...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAGCTCGGCCCCAGCGCTaGTCTCCAGCGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKARPQR*SPAWRW
Trigger: CCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGAGC...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCGGAGGTCCCGGGAACTaGGAAGGGCACGACGGTTCT +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPGGPGN*EGHDGS
Trigger: AGAACCGTCGTGCCCTTCTCAGTTCCCGGGACCTCC...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCAGGAGGGGCACCCGCTaGTCGTACACCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPRRGTR*SYTLES
Trigger: GCTCTCCAAGGTGTACGAGCAGCGGGTGCCCCTCCT...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGTGTGGCGCTCAGGGATaGCCCGGAGCCGAGCGTACA +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQCGAQG*PGAERT
Trigger: TGTACGCTCGGCTCCGGGGCATCCCTGAGCGCCACA...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCAAGATGGGCCCTGCTTaGCCGTCCTGTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSKMGPA*PSCPCL
Trigger: CAGGCAGGGACAGGACGGGCAAGCAGGGCCCATCTT...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGGTGGCGTTGGGCACGTaGTGGTGGACCAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQVALGT*WWTSWE
Trigger: CTCCCAGCTGGTCCACCACCACGTGCCCAACGCCAC...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCAGTGCAGCCAGCTGCTaGGCCCCATCATGCGCATGT +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPSAASC*APSCAC
Trigger: ACATGCGCATGATGGGGCTCAGCAGCTGGCTGCACT...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCGGGGAAAGAGACCTGTaGGCATGGAGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPGERDL*AWRGWW
Trigger: CCACCACCCTCTCCATGCTCACAGGTCTCTTTCCCC...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCGCTCCCCCTTGGCCATaGTGGCGATGCGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFAPPWP*WRCGLP
Trigger: TGGGAGACCGCATCGCCATCATGGCCAAGGGGGAGC...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAGCTCCGAGGAGTAGTTaGTGGCCAGGAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKAPRSS*WPGGPG
Trigger: CCCTGGCCCTCCTGGCCATCAACTACTCCTCGGAGC...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCACGGCCCTCTCGCTaGCCGCCAGGATGGAGAACG +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLARPSR*PPGWRT
Trigger: CGTTCTCCATCCTGGCGGTCAGCGAGAGGGCCGTGC...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAGAGGTAGGCGCACCCTaGGGCGGCCATGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLREVGAP*GGHGGH
Trigger: GTGGCCTCCATGGCCGCCTCAGGGTGCGCCTACCTC...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAGAGGACCCGCAGCACTaGAGCTCCCCCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKEDPQH*SSPLAM
Trigger: CATGGCCAAGGGGGAGCTGCAGTGCTGCGGGTCCTC...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCTGGCGCGCCTCTCGTaGTGGTACTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQLARLS*WYCRAG
Trigger: CCCTGCCCTGCAGTACCAGCACGAGAGGCGCGCCAG...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTTGGTCCTTGGCAGCCTaGAGGGCGCTCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAAWSLAA*RALRGW
Trigger: CCAGCCCCGGAGCGCCCTGCAGGCTGCCAAGGACCA...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCGACTGGGGGCCAGGATaGGGGTCCTCTCGTCCGCTA +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFDWGPG*GSSRPL
Trigger: TAGCGGACGAGAGGACCCGCATCCTGGCCCCCAGTC...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAGGACTACTGGGGAACTaGCCAGGAGGAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKGLLGN*PGGGGS
Trigger: GGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAGTCC...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCGTCACCGTCAGTCTCTaGAACAGCTGGCGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPVTVSL*NSWRVA
Trigger: CGCCACACGCCAGCTGTTCCAGAGACTGACGGTGAC...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGAGGGGCAGCTGGTACTaGATGGCCACGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQRGSWY*MATRKG
Trigger: CCCCTTCCTCGTGGCCATCCAGTACCAGCTGCCCCT...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCCACGCCGAACTGCCCTaGGAAGACGGCCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSHAELP*EDGLHV
Trigger: TACATGGAGGCCGTCTTCCCAGGGCAGTTCGGCGTG...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCGCATGGAGAGGGTGGTaGTCTTCCCGGCACCGTTGT +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSAWRGW*SSRHRC
Trigger: ACAACGGTGCCGGGAAGACCACCACCCTCTCCATGC...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCCGTCCATGCCCGAGGTaGGCTCGTCCAGTATCAGCA +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSRPCPR*ARPVSA
Trigger: TGCTGATACTGGACGAGCCCACCTCGGGCATGGACG...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCGCGCCTCTCGTGCTaGTACTGCAGGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLARLSC*YCRAGS
Trigger: GCTCCCTGCCCTGCAGTACCAGCACGAGAGGCGCGC...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCGGGGCTGGGGGAAGTTaGAGACCACAATGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPGAGGS*RPQWRR
Trigger: ACGCCTCCATTGTGGTCTCCAACTTCCCCCAGCCCC...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCAGACTGCTTCGAGCCTaGCCACCTTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPRLLRA*PPSLLC
Trigger: GCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCT...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGGAGCGCCAGCTGCCTaGGCACAGCCATCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLGAPAA*AQPSSC
Trigger: GCAAGACGATGGCTGTGCTCAGGCAGCTGGCGCTCC...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAGGCCCAGCAGGACGGTaGTCTGTCCCTCGTACAGGT +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKGPAGR*SVPRTG
Trigger: ACCTGTACGAGGGACAGATCACCGTCCTGCTGGGCC...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTTGTGGCCGTCCCGCGTaGAGGCACGCACGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAACGRPA*RHARRR
Trigger: CCTTCGACGTGCGTGCCTTCACGCGGGACGGCCACA...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCAGGACATCAGGAGGTaGCCAGGGCTCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQQDIRR*PGLTGM
Trigger: CATGCCTGTGAGCCCTGGGCACCTCCTGATGTCCTG...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTTCTTCCTCCTTCCCTaGAACCGCCCTTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSFFLLP*NRPWLP
Trigger: GGGAAGCCAAGGGCGGTTGCAGGGAAGGAGGAAGAA...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCGAGGACCCGCAGCACTaGAGCTCCCCCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSEDPQH*SSPLAM
Trigger: CATGGCCAAGGGGGAGCTGCAGTGCTGCGGGTCCTC...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGAGACTCTCGGGCTCGTaGCACGGTGTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQRLSGS*HGVPKQ
Trigger: CTGCTTTGGGACACCGTGGCACGAGCCCGAGAGTCT...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCAGAGACCCCGGAGCTTaGCCGCAGACTGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFRDPGA*PQTARP
Trigger: AGGCCGGGCAGTCTGCGGGCAAGCTCCGGGGTCTCT...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCCCACCTTCCCTCCTGTaGCGGCTGCTTCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSPPSLL*RLLLGD
Trigger: ATCTCCTAGAAGCAGCCGGCACAGGAGGGAAGGTGG...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAAGGGGAGGGTGCGCCTaGAACCCGCTACTGGCGGAC +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRRGGCA*NPLLAD
Trigger: GTCCGCCAGTAGCGGGTTGCAGGCGCACCCTCCCCT...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382381.7
CDS-3UTR CCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCGGCAACCCTGAGGTTTaGGAACACCGTGACCTCGCA +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSGNPEV*EHRDLA
Trigger: TGCGAGGTCACGGTGTTCCCAAACCTCAGGGTTGCC...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCGTGGCGGCATCGGCATaGTACTCCATGATGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFVAASA*YSMMAR
Trigger: CCGGGCCATCATGGAGTACCATGCCGATGCCGCCAC...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCCGCCACCAGGTCCTCTaGCTCGGCTTCAAAGTACTC +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPRHQVL*LGFKVL
Trigger: GAGTACTTTGAAGCCGAGCCAGAGGACCTGGTGGCG...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGGCATGGAGAGGGTGGTaGTCTTCCCGGCACCGTTGT +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQAWRGW*SSRHRC
Trigger: ACAACGGTGCCGGGAAGACCACCACCCTCTCCATGC...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTGGAAGGGGTCTGCGATaGACGGCGGGTACGGGAACC +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIGRGLR*TAGTGT
Trigger: GGTTCCCGTACCCGCCGTTCATCGCAGACCCCTTCC...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCAGTGCAGCCAGCTGCTaGGCCCCATCATGCGCATGT +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFSAASC*APSCAC
Trigger: ACATGCGCATGATGGGGCTCAGCAGCTGGCTGCACT...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCAGTCGTCGTCCACGTTaGCGGGACTCAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFSRRPR*RDSGGL
Trigger: GAGACCTCCTGAGTCCCGTCAACGTGGACGACGACT...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGGCTCCCCCTTGGCCATaGTGGCGATGCGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMAPPWP*WRCGLP
Trigger: TGGGAGACCGCATCGCCATCATGGCCAAGGGGGAGC...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTGCTCCGAGGAGTAGTTaGTGGCCAGGAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIAPRSS*WPGGPG
Trigger: CCCTGGCCCTCCTGGCCATCAACTACTCCTCGGAGC...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTCAGAGCTGATTCTGTaGCCCCCGACAAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSSELIL*PPTKAS
Trigger: GGATGCCTTTGTCGGGGGTCACAGAATCAGCTCTGA...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTGGAGCCGAGCGTACATaGCCAGCATCTCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAAGAERT*PASPGL
Trigger: CAGGCCGGGAGATGCTGGTCATGTACGCTCGGCTCC...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCACGAGGAAGGGGTCTaGGATGAACGGCGGGTACGG +
Preference number: 4 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQHEEGV*DERRVR
Trigger: CCGTACCCGCCGTTCATCGCAGACCCCTTCCTCGTG...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCCTCGCGCCAGCTGTATaGGGCCTTCTTCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPLAPAV*GLLQEH
Trigger: ATGTTCCTGAAGAAGGCCGCATACAGCTGGCGCGAG...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTTGCCCGTCCTGTCCCTaGCTGATGGCGAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAACPSCP*LMARQP
Trigger: CGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCA...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCCCACTGACAGTGATCTaGATGGTCCATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: TATQPLGWSLRVLGRATSPLTVI*MVHSWR
Trigger: CCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAGGACTACTGGGGAACTaGCCAGGAGGAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRGLLGN*PGGGGS
Trigger: GGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAGTCC...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCGTGGCTGCTCTGTCCTaGAGAGGCAGGGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFVAALS*RGREGD
Trigger: ATCGCCTTCCCTGCCTCTCCAGGACAGAGCAGCCAC...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACGTCCATGCCCGAGGTaGGCTCGTCCAGTATCAGCA +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKRPCPR*ARPVSA
Trigger: TGCTGATACTGGACGAGCCCACCTCGGGCATGGACG...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCTGGCCCTCCTGGAGATaGCGTCCATGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFWPSWR*RPCPRW
Trigger: CCACCTCGGGCATGGACGCCATCTCCAGGAGGGCCA...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCGTGGCGTTGGGCACGTaGTGGTGGACCAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFVALGT*WWTSWE
Trigger: CTCCCAGCTGGTCCACCACCACGTGCCCAACGCCAC...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCGCTGCTCTCCAGCGTaGCGTTGGGCACGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFRCSPA*RWARGG
Trigger: ACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCG...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGACGCTGCTCTCCAGCGTaGCGTTGGGCACGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRRCSPA*RWARGG
Trigger: ACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCG...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGGGGAGCTGGATGGCCTaGATGTCCATACTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQGSWMA*MSILLS
Trigger: GGACAGCAGTATGGACATCCAGGCCATCCAGCTCCC...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGAGGGCGCTCCGGGGCTaGGGGAAGTTGGAGACCACA +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMRALRG*GKLETT
Trigger: TGTGGTCTCCAACTTCCCCCAGCCCCGGAGCGCCCT...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAAGGGCGCTCCGGGGCTaGGGGAAGTTGGAGACCACA +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRRALRG*GKLETT
Trigger: TGTGGTCTCCAACTTCCCCCAGCCCCGGAGCGCCCT...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAACCCTGAGGCGGCCATaGAGGCCACAAACCGGCCGA +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRTLRRP*RPQTGR
Trigger: TCGGCCGGTTTGTGGCCTCCATGGCCGCCTCAGGGT...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTACGCAGGCCCCGATGTaGCGCTCAGGGATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTTQAPM*RSGMPR
Trigger: CCGGGGCATCCCTGAGCGCCACATCGGGGCCTGCGT...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAACCCAGCCCTTAGGGTaGTCCCTGCGTGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATTQPLG*SLRVLG
Trigger: CCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGT...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCTGCGCACTGTCTCAGTaGCGGTCTTGGCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSCALSQ*RSWQRH
Trigger: GTGACGCTGCCAAGACCGTCACTGAGACAGTGCGCA...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCAGTCGTCGTCCACGTTaGCGGGACTCAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSSRRPR*RDSGGL
Trigger: GAGACCTCCTGAGTCCCGTCAACGTGGACGACGACT...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCAAGAAGTACCAGGGCTaGGGCACGCCGAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSKKYQG*GTPNCP
Trigger: AGGGCAGTTCGGCGTGCCTCAGCCCTGGTACTTCTT...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTTCCTCCATGGTGGTaGTGGATGCCCCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFLPPWW*WMPQSW
Trigger: CCAGCTTTGGGGCATCCATCACCACCATGGAGGAAG...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTCTCCCACATCTCTaGAGGACGCTGCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLALPHL*RTLPQG
Trigger: GCCTTGTGGCAGCGTCCTTCAGAGATGTGGGAGAGC...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTACCACAATGGAGGCGTaGGGCCCGCACAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEITTMEA*GPHSSL
Trigger: CAAGCTGCTGTGCGGGCCTCACGCCTCCATTGTGGT...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGGCATCCCCAGAAGTaGGGCTCTCCTCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIRHPQK*GSPPRS
Trigger: TGACCGGGGAGGAGAGCCTCACTTCTGGGGATGCCT...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGATGCCCGGCTTCGCGGTaGCTACCATGCCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRCPASR*LPCPKE
Trigger: CTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCA...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAGGTCTCGCCACTGGATaGCCATGCCTTTCGCCTCAA +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKGLATG*PCLSPQ
Trigger: TTGAGGCGAAAGGCATGGGCATCCAGTGGCGAGACC...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR GCA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGAGCATCCCCAGCACCTaGCCGAAGCAGAAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQSIPST*PKQKSS
Trigger: CGACGACTTCTGCTTCGGGCAGGTGCTGGGGATGCT...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGAGCATCCCCAGCACCTaGCCGAAGCAGAAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLSIPST*PKQKSS
Trigger: CGACGACTTCTGCTTCGGGCAGGTGCTGGGGATGCT...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAATTCTTCCTCCTTCCCTaGAACCGCCCTTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKFFLLP*NRPWLP
Trigger: GGGAAGCCAAGGGCGGTTGCAGGGAAGGAGGAAGAA...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTAACAGGATGTCGTGCTaGGGGCACAGGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAANRMSC*GHRPRL
Trigger: GAGCCTGGGCCTGTGCCCGCAGCACGACATCCTGTT...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGATGCACATGCTTGGCCTaGACGGCCCTCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRCTCLA*TALSLT
Trigger: GGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCA...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCGACCTCGGAGGAGGTaGAGTACCTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMRPRRR*STSASR
Trigger: ACGAGACGCGGAGGTACTGCACCTCCTCCGAGGTCG...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGAAGCACTCCCCTTTCTaGACCGCGAGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQKHSPF*TARESL
Trigger: CAGGCTCTCCCTCGCGGTGCAGAAAGGGGAGTGCTT...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTAACCCCCAGCTCAGCTaGAGCCCTTCCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAANPQLS*SPSWVS
Trigger: GCTGACCCAGGAAGGGCTGCAGCTGAGCTGGGGGTT...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCGAGGTGTGCAGACGTaGCTGCTCTGTCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQRGVQT*LLCPGE
Trigger: CTCTCCAGGACAGAGCAGCCACGTCTGCACACCTCG...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGACTGGCCCGGGTAGATaGTGGCGTTGGGCACATTTT +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQTGPGR*WRWAHF
Trigger: AAAATGTGCCCAACGCCACCATCTACCCGGGCCAGT...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTGAGGCAGCTCCTGGATaGACTGGCCCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIEAAPG*TGPGRW
Trigger: CCATCTACCCGGGCCAGTCCATCCAGGAGCTGCCTC...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTGGCGGCATCGGCATaGTACTCCATGATGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATVAASA*YSMMAR
Trigger: CCGGGCCATCATGGAGTACCATGCCGATGCCGCCAC...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGAGTCTCTGGAACAGCTaGCGTGTGGCGGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLSLWNS*RVAASA
Trigger: TGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACT...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTAGGGGCAGCTGGTACTaGATGGCCACGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAARGSWY*MATRKG
Trigger: CCCCTTCCTCGTGGCCATCCAGTACCAGCTGCCCCT...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAAGCAGCAGGGGCAGCTaGTACTGGATGGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATSSRGS*YWMATR
Trigger: CCTCGTGGCCATCCAGTACCAGCTGCCCCTGCTGCT...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACGCCACCAGGTCCTCTaGCTCGGCTTCAAAGTACTC +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKRHQVL*LGFKVL
Trigger: GAGTACTTTGAAGCCGAGCCAGAGGACCTGGTGGCG...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCTTGGGCACGTGGTGGTaGACCAGCTGGGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFLGTWW*TSWEMS
Trigger: AGACATCTCCCAGCTGGTCCACCACCACGTGCCCAA...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCTCTCCAGCGTGGCGTTaGGCACGTGGTGGTGGACCA +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFSPAWR*ARGGGP
Trigger: TGGTCCACCACCACGTGCCCAACGCCACGCTGGAGA...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCGTCGGAGGGGTCCATaGCCCCACAGAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFRRRGP*PHRGCC
Trigger: ACAGCAACCTCTGTGGGGCCATGGACCCCTCCGACG...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTGGCCAGGGCAGTGGCTaGAGAGTGGTACGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAAGQGSG*RVVRLV
Trigger: AACCAGGCGTACCACTCTCCAGCCACTGCCCTGGCC...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGGCCAGGGCAGTGGCTaGAGAGTGGTACGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATGQGSG*RVVRLV
Trigger: AACCAGGCGTACCACTCTCCAGCCACTGCCCTGGCC...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCCAAACTGCACATGCTTaGCCTGCACGGCCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSQTAHA*PARPSR
Trigger: GCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTG...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCAGAGAGCCAGAAACTaGCCACGTGGACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQQRARN*PRGLHS
Trigger: TGAGTGGAGTCCACGTGGCCAGTTTCTGGCTCTCTG...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGTCGTCCGCTACATCTTaGTCCTCAGGAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQSSATS*SSGSTG
Trigger: GCCTGTGCTTCCTGAGGACCAAGATGTAGCGGACGA...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAGCAGGGAGTCCGGACTaGGGGCCAGGATGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVAGSPD*GPGCGS
Trigger: GGACCCGCATCCTGGCCCCCAGTCCGGACTCCCTGC...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCCTGGGCATGAGGGCTaGGCTGCACTCGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLPGHEG*AALVHS
Trigger: AGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCAGCTGCAGCCCTTCCTaGGTCAGCTCTCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSSCSPS*VSSPPR
Trigger: TCTGGGTGGAGAGCTGACCCAGGAAGGGCTGCAGCT...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGACAGCCATCGTCTTGCTaGAAGGGACGCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRQPSSC*KGRPVL
Trigger: CAGCACTGGGCGTCCCTTTCAGCAAGACGATGGCTG...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTTGCGCACTGTCTCAGTaGCGGTCTTGGCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAACALSQ*RSWQRH
Trigger: GTGACGCTGCCAAGACCGTCACTGAGACAGTGCGCA...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTTGCGCTCCTCCTCGATaGGGGCTCCAATGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTCAPPR*GLQCRR
Trigger: CCGACGGCATTGGAGCCCTCATCGAGGAGGAGCGCA...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGTGCGCTCCTCCTCGATaGGGGCTCCAATGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLCAPPR*GLQCRR
Trigger: CCGACGGCATTGGAGCCCTCATCGAGGAGGAGCGCA...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTACCAGGAGGGCCAGGGTaGCGCAGGTCAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVPGGPG*RRSEAP
Trigger: TGGTGCCTCTGACCTGCGTCACCCTGGCCCTCCTGG...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAGCACGGCCCTCTCGCTaGCCGCCAGGATGGAGAACG +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVARPSR*PPGWRT
Trigger: CGTTCTCCATCCTGGCGGTCAGCGAGAGGGCCGTGC...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCGAGGTAGGCGCACCCTaGGGCGGCCATGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGEVGAP*GGHGGH
Trigger: GTGGCCTCCATGGCCGCCTCAGGGTGCGCCTACCTC...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACACGCAGAGGATGCCCCTaGGTCTCTGAAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATRRGCP*VSEAGW
Trigger: CCAACCTGCTTCAGAGACTCAGGGGCATCCTCTGCG...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGGGCGGGCGACTTCCTaGGGGTGCAGTGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTGRATS*GCSAGN
Trigger: GTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCC...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCCAGGGAGGGGTCGCTaGGGGACAGCACGGCTACAT +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLPGRGR*GTARLH
Trigger: ATGTAGCCGTGCTGTCCCGCAGCGACCCCTCCCTGG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAATGGTCAGCACGATGGTaGGGTCACTTTTCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKWSARW*GHFSAA
Trigger: AGCGGCAGAAAAGTGACCGCACCATCGTGCTGACCA...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTTCTTCCGGGTTGCAGTaGGGCTCCTTCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAASSGLQ*GSFTSV
Trigger: GACGCTGGTGAAGGAGCCGCACTGCAACCCGGAAGA...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCAGATGTCTTCCGGGTTaGAGTGCGGCTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFRCLPG*SAAPSP
Trigger: TGGTGAAGGAGCCGCACTGCAACCCGGAAGACATCT...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGCTCGGCCCCAGCGCTaGTCTCCAGCGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLARPQR*SPAWRW
Trigger: CCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGAGC...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCCAGAATTGCTGGCAGTaGAGGGCGAGCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSQNCWQ*RASPVL
Trigger: CAACACTGGGCTCGCCCTGCACTGCCAGCAATTCTG...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAATCCTGTCCCTCAGCCTaGAGTGCGTCTTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKSCPSA*SASFRC
Trigger: GCATCTGAAAGACGCACTGCAGGCTGAGGGACAGGA...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCGTGCTGGCCAAGAATaGCATGGCGAAGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFRAGQE*HGEEQV
Trigger: AACCTGCTCTTCGCCATGGCATTCTTGGCCAGCACG...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGAAGCACTCCCCTTTCTaGACCGCGAGGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMKHSPF*TARESL
Trigger: CAGGCTCTCCCTCGCGGTGCAGAAAGGGGAGTGCTT...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGACTCTCGGGCTCGTaGCACGGTGTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIRLSGS*HGVPKQ
Trigger: CTGCTTTGGGACACCGTGGCACGAGCCCGAGAGTCT...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGAGGACTACTGGGGAACTaGCCAGGAGGAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRGLLGN*PGGGGS
Trigger: GGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAGTCC...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTGAGAGCCCCTGGTGCTaGTCCACTCGCTACAACTGC +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAAESPWC*STRYNC
Trigger: GCAGTTGTAGCGAGTGGACCAGCACCAGGGGCTCTC...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGGCCCGGGTAGATGGTaGCGTTGGGCACATTTTCCG +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATGPGRW*RWAHFP
Trigger: CGGAAAATGTGCCCAACGCCACCATCTACCCGGGCC...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCTCCCAGGTGTCTCCTaGCGGAGGGAAGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQLPGVS*RREGEE
Trigger: TTCTTCACCTTCCCTCCGCCAGGAGACACCTGGGAG...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCCTTGGTCCTGGGTTTaGGAAAAGCGGGAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQPWSWV*EKREKG
Trigger: TCCCTTTTCCCGCTTTTCCCAAACCCAGGACCAAGG...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTCACGCCGAACTGCCCTaGGAAGACGGCCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIHAELP*EDGLHV
Trigger: TACATGGAGGCCGTCTTCCCAGGGCAGTTCGGCGTG...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCGGGCAGGGAGCTGGATaGCCTGGATGTCCATACTGC +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFGQGAG*PGCPYC
Trigger: GCAGTATGGACATCCAGGCCATCCAGCTCCCTGCCC...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCATGGCCCAGAATTGCTaGCAGTGCAGGGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFMAQNC*QCRASP
Trigger: TGGGCTCGCCCTGCACTGCCAGCAATTCTGGGCCAT...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGGTCAGCCTCAGCATaGGGTCGTCGAAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIRSASA*GRRRAP
Trigger: CGGAGCTCTTCGACGACCCCATGCTGAGGCTGACCT...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGGGAGAGTGGTACGCCTaGTTGTTGAACAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQGEWYA*LLNKAL
Trigger: CAACGCCTTGTTCAACAACCAGGCGTACCACTCTCC...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCGGCCCTCGTTAAACTaGTCCTTGGCAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMRPSLN*SLAACR
Trigger: CCTGCAGGCTGCCAAGGACCAGTTTAACGAGGGCCG...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGGCCATCCCCAGACAGTaGTTGGGCAGCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMAIPRQ*LGSTRN
Trigger: GTTCCTGGTGCTGCCCAACCACTGTCTGGGGATGGC...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGACGCAGGCCCCGATGTaGCGCTCAGGGATGCCCCGG +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLTQAPM*RSGMPR
Trigger: CCGGGGCATCCCTGAGCGCCACATCGGGGCCTGCGT...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGCCCCTCCTCTGCGGTaGGCGGCTGCAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHAPPLR*AAAGGR
Trigger: TCGCCCACCTGCAGCCGCCCACCGCAGAGGAGGGGC...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGCCCCTCCTCTGCGGTaGGCGGCTGCAGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLAPPLR*AAAGGR
Trigger: TCGCCCACCTGCAGCCGCCCACCGCAGAGGAGGGGC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGACCTGGGCATGAGGGCTaGGCTGCACTCGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRPGHEG*AALVHS
Trigger: AGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGG...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAAGCTGCAGCCCTTCCTaGGTCAGCTCTCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRSCSPS*VSSPPR
Trigger: TCTGGGTGGAGAGCTGACCCAGGAAGGGCTGCAGCT...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTAGACTGCTTCGAGCCTaGCCACCTTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAARLLRA*PPSLLC
Trigger: GCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCT...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTGGTCCCTGCGTGTCCTaGGGCGGGCGACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAGPCVS*GGRLPE
Trigger: CTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACC...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGGGAGGTCCCGGGAACTaGGAAGGGCACGACGGTTCT +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALGGPGN*EGHDGS
Trigger: AGAACCGTCGTGCCCTTCTCAGTTCCCGGGACCTCC...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTACCACAATGGAGGCGTaGGGCCCGCACAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTTTMEA*GPHSSL
Trigger: CAAGCTGCTGTGCGGGCCTCACGCCTCCATTGTGGT...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCTGGCGAAGAGCAGGTTaGGGGCAATGTCGAATCCCT +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSWRRAG*GQCRIP
Trigger: AGGGATTCGACATTGCCCTCAACCTGCTCTTCGCCA...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCACCACTGTACGTCCTaGCCAGCTTGTTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLHHCTS*PACWHV
Trigger: CACATGCCAACAAGCTGGTCAGGACGTACAGTGGTG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGCGTCCTGTCCCTGCCTaGTGGCGAGACAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLRPVPA*WRDSRH
Trigger: GTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACG...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTTGCCCGGCTTCGCGGTaGCTACCATGCCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTCPASR*LPCPKE
Trigger: CTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCA...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATGGCGGCACTGACAGCTaGGTGGCCGCCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHGGTDS*VAALEG
Trigger: CCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCC...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTCTGTGGTTGAAGGGGTaGTCGAAGACCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTLWLKG*SKTTAA
Trigger: GGCCGCCGTGGTCTTCGAGCACCCCTTCAACCACAG...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCTCCTTTCCTTCTCCTaGACGACAGCACGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLLLSFS*TTARAM
Trigger: CATTGCCCGTGCTGTCGTGCAGGAGAAGGAAAGGAG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGTGGTCAGCACGATGGTaGGGTCACTTTTCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQWSARW*GHFSAA
Trigger: AGCGGCAGAAAAGTGACCGCACCATCGTGCTGACCA...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAAACATGGCCCAGAATTaGTGGCAGTGCAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATNMAQN*WQCRAS
Trigger: GCTCGCCCTGCACTGCCAGCAATTCTGGGCCATGTT...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCCTCGCGCCAGCTGTATaGGGCCTTCTTCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSLAPAV*GLLQEH
Trigger: ATGTTCCTGAAGAAGGCCGCATACAGCTGGCGCGAG...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAAATCTCTGAAGGACGCTaGCACAAGGCACCGCTCATT +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKISEGR*HKAPLI
Trigger: AATGAGCGGTGCCTTGTGGCAGCGTCCTTCAGAGAT...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTGGTCCTTGGCAGCCTaGAGGGCGCTCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLWSLAA*RALRGW
Trigger: CCAGCCCCGGAGCGCCCTGCAGGCTGCCAAGGACCA...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACTGGGGGCCAGGATaGGGGTCCTCTCGTCCGCTA +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLDWGPG*GSSRPL
Trigger: TAGCGGACGAGAGGACCCGCATCCTGGCCCCCAGTC...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGTCATCGCCCCTCCTCTaGGGTGGGCGGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLSSPLL*GGRLQV
Trigger: CACCTGCAGCCGCCCACCGCAGAGGAGGGGCGATGA...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTATGCCCGTCCTGTCCCTaGCTGATGGCGAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVCPSCP*LMARQP
Trigger: CGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCA...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGCAGAGGGCTCCGGGGTaGGGCCTGAGAGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLQRAPG*GLRASG
Trigger: TCCAGAGGCTCTCAGGCCCCACCCCGGAGCCCTCTG...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCTCAGCTCCACACTCATaGCTGGGTCCCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFSAPHS*LGPRRG
Trigger: GCCTCTTCTGGGACCCAGCCATGAGTGTGGAGCTGA...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGGAGGCAGCTCCTGGATaGACTGGCCCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLEAAPG*TGPGRW
Trigger: CCATCTACCCGGGCCAGTCCATCCAGGAGCTGCCTC...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGAGAGGCAGCTCCTGGATaGACTGGCCCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTREAAPG*TGPGRW
Trigger: CCATCTACCCGGGCCAGTCCATCCAGGAGCTGCCTC...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGGGGCTCCTTGCTGTaGTTGAAGGGGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIRGSLL*LKGCSK
Trigger: CTTCGAGCACCCCTTCAACCACAGCAAGGAGCCCCT...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTGCAACCGCCCTTaGCTTCCCACACCAATAGGA +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMPCNRP*LPTPIG
Trigger: TCCTATTGGTGTGGGAAGCCAAGGGCGGTTGCAGGG...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGAAGAAGATCCCAGATaGCCCTCCTGGAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLEEDPR*PSWRWR
Trigger: ACGCCATCTCCAGGAGGGCCATCTGGGATCTTCTTC...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTTGGTGGTGGACCAGCTaGGAGATGTCTTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAAWWWTS*EMSSGL
Trigger: CAACCCGGAAGACATCTCCCAGCTGGTCCACCACCA...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGGGGAGCTGGATGGCCTaGATGTCCATACTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMGSWMA*MSILLS
Trigger: GGACAGCAGTATGGACATCCAGGCCATCCAGCTCCC...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTTGCAGGGCAGGGAGCTaGATGGCCTGGATGTCCATA +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEICRAGS*MAWMSI
Trigger: TATGGACATCCAGGCCATCCAGCTCCCTGCCCTGCA...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCGCAGTGGCTGGAGAGTaGTACGCCTGGTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSAVAGE*YAWLLN
Trigger: GTTCAACAACCAGGCGTACCACTCTCCAGCCACTGC...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCGACGGCCAGGGCAGTaGCTGGAGAGTGGTACGCCT +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLRRPGQ*LESGTP
Trigger: AGGCGTACCACTCTCCAGCCACTGCCCTGGCCGTCG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTACCCTGAGGCGGCCATaGAGGCCACAAACCGGCCGA +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWATLRRP*RPQTGR
Trigger: TCGGCCGGTTTGTGGCCTCCATGGCCGCCTCAGGGT...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAGCAGGGAGTCCGGACTaGGGGCCAGGATGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPAGSPD*GPGCGS
Trigger: GGACCCGCATCCTGGCCCCCAGTCCGGACTCCCTGC...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCACTCCTCCATGCTGTaGGAGGTGATGATGATGGCC +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLHSSML*EVMMMA
Trigger: GGCCATCATCATCACCTCCCACAGCATGGAGGAGTG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCACCCAGCCCTTAGGGTaGTCCCTGCGTGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCTQPLG*SLRVLG
Trigger: CCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGT...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCCAGGGCTCACAGGCATaGCTCTCCAGCACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCQGSQA*LSSTEP
Trigger: AGGCTCGGTGCTGGAGAGTCATGCCTGTGAGCCCTG...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCAGGAGAAACGTGCTCTaGAAACTGAGTGTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: MGPACPSCPCLMARQPPPRRNVL*KLSVKR
Trigger: CCTCTTTACACTCAGTTTTCAGAGCACGTTTCTCCT...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCAGCCATCGTCTTGCTaGAAGGGACGCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLQPSSC*KGRPVL
Trigger: CAGCACTGGGCGTCCCTTTCAGCAAGACGATGGCTG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGATGCGCACTGTCTCAGTaGCGGTCTTGGCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRCALSQ*RSWQRH
Trigger: GTGACGCTGCCAAGACCGTCACTGAGACAGTGCGCA...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTCGCGCACTCGCATGTTaGTCACAAGTGCCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTRALAC*SQVPCA
Trigger: TGCGCAGGGCACTTGTGATCAACATGCGAGTGCGCG...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCGGCATGGTACTCCATaGTGGCCCGGTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLRHGTP*WPGPQH
Trigger: ATGCTGTGGACCGGGCCATCATGGAGTACCATGCCG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCATTTGGCTTCACCTTaGCACAGAAGAGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFHLASP*HRRAGS
Trigger: TGACCCTGCTCTTCTGTGTCAAGGTGAAGCCAAATG...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCCTTATTTCCCACCCTaGACACCTTGGACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLPYFPP*TPWTGA
Trigger: AGCACCTGTCCAAGGTGTTCAGGGTGGGAAATAAGG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGTGCCTGACAGGATGTTaGAGATGGTCAGCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLCLTGC*RWSASC
Trigger: ACACGAGGCTGACCATCTTCAACATCCTGTCAGGCA...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCATGCCCCTGAGTCTCTaGAGCAGGTTGGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFMPLSL*SRLVSM
Trigger: CATCGAGACCAACCTGCTTCAGAGACTCAGGGGCAT...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACACACCACTGTACGTCCTaGCCAGCTTGTTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATHHCTS*PACWHV
Trigger: CACATGCCAACAAGCTGGTCAGGACGTACAGTGGTG...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAGGCGGCACTGACAGCTaGGTGGCCGCCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSGGTDS*VAALEG
Trigger: CCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCC...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCTCAGCGTCCTTCATGTaGGGAAAAGCCTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFSASFM*GKASLT
Trigger: AGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGA...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCTGTGGTTGAAGGGGTaGTCGAAGACCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWALWLKG*SKTTAA
Trigger: GGCCGCCGTGGTCTTCGAGCACCCCTTCAACCACAG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCCACGAGGAAGGGGTCTaGGATGAACGGCGGGTACGG +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCHEEGV*DERRVR
Trigger: CCGTACCCGCCGTTCATCGCAGACCCCTTCCTCGTG...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACAGGATGTCGTGCTaGGGGCACAGGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVNRMSC*GHRPRL
Trigger: GAGCCTGGGCCTGTGCCCGCAGCACGACATCCTGTT...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCATGGTGGTGATGGATaGCCCAAAGCTGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFHGGDG*PKAGNA
Trigger: GGCATTGCCAGCTTTGGGGCATCCATCACCACCATG...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTTGGCCCCACAGAGGTTaGTGTCCACAGCCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAWPHRG*CPQPSR
Trigger: GCGACTGGGCTGTGGACAGCAACCTCTGTGGGGCCA...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGACCAGGATGGAGAACGTaGTGGCCAAGAATGCCATGG +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRPGWRT*WPRMPW
Trigger: CCATGGCATTCTTGGCCAGCACGTTCTCCATCCTGG...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGTGTGGCGCTCAGGGATaGCCCGGAGCCGAGCGTACA +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLCGAQG*PGAERT
Trigger: TGTACGCTCGGCTCCGGGGCATCCCTGAGCGCCACA...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTACTCCGATCAGGGCGATaGCGGTGCTCAGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVLRSGR*RCSASA
Trigger: AGCGGAAGCTGAGCACCGGCATCGCCCTGATCGGAG...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTTCATCGCCCCTCCTCTaGGGTGGGCGGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGSSPLL*GGRLQV
Trigger: CACCTGCAGCCGCCCACCGCAGAGGAGGGGCGATGA...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGCTGCTTCTAGGAGATaGTGTGGGACGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLAASRR*CGTVPG
Trigger: GCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCGCACTGACAGCTGCGTaGCCGCCCTGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLALTAA*PPWRGG
Trigger: CCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGC...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGCACTGACAGCTGCGTaGCCGCCCTGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRALTAA*PPWRGG
Trigger: CCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGC...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGAGGCAGGGAAGGCGATaGAGGAGGGGCAGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLRQGRR*RRGSLE
Trigger: CTCTAGACTGCCCCTCCTCCATCGCCTTCCCTGCCT...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAGGCAGGGAAGGCGATaGAGGAGGGGCAGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALRQGRR*RRGSLE
Trigger: CTCTAGACTGCCCCTCCTCCATCGCCTTCCCTGCCT...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTACTGGCCCGGGTAGATaGTGGCGTTGGGCACATTTT +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAATGPGR*WRWAHF
Trigger: AAAATGTGCCCAACGCCACCATCTACCCGGGCCAGT...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAGCAGCAGGGGCAGCTaGTACTGGATGGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVSSRGS*YWMATR
Trigger: CCTCGTGGCCATCCAGTACCAGCTGCCCCTGCTGCT...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGGAAGAAGATCCCAGATaGCCCTCCTGGAGATGGCGT +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMEEDPR*PSWRWR
Trigger: ACGCCATCTCCAGGAGGGCCATCTGGGATCTTCTTC...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCCGTCGGAGGGGTCCATaGCCCCACAGAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCRRRGP*PHRGCC
Trigger: ACAGCAACCTCTGTGGGGCCATGGACCCCTCCGACG...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGGATGGAGAACGTGCTaGCCAAGAATGCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATGWRTC*PRMPWR
Trigger: TCGCCATGGCATTCTTGGCCAGCACGTTCTCCATCC...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTAGGGTGTCAGCCATGTaGCCGTCCCGCGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWARVSAM*PSRVKA
Trigger: TGCCTTCACGCGGGACGGCCACATGGCTGACACCCT...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGAGGGTGTCAGCCATGTaGCCGTCCCGCGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLRVSAM*PSRVKA
Trigger: TGCCTTCACGCGGGACGGCCACATGGCTGACACCCT...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGTGCATGGTCCATTCCTaGCGGCCTGGGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLCMVHS*RPGGLA
Trigger: AGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCA...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAGGTCCCTGCGTGTCCTaGGGCGGGCGACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPGPCVS*GGRLPE
Trigger: CTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACC...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGCAGGGCTCACAGGCATaGCTCTCCAGCACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLQGSQA*LSSTEP
Trigger: AGGCTCGGTGCTGGAGAGTCATGCCTGTGAGCCCTG...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGATCAAGCGGAGCCAGATaGGGATCCCAGAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRSSGAR*GSQKTA
Trigger: TGCTGTTTTCTGGGATCCTCATCTGGCTCCGCTTGA...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGGGCACATTTTCCGACTaGATCTTCAAGCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMGTFSD*IFKRSQ
Trigger: CTGGCTCCGCTTGAAGATTCAGTCGGAAAATGTGCC...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCAAATTTCCCAATaGGCTGGGCTCCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFPQISQ*AGLPLP
Trigger: TGGCAATGGGAGCCCAGCTCATTGGGAAATTTGAGG...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR TCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCGGCCCAGCAGGACGGTaGTCTGTCCCTCGTACAGGT +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGGPAGR*SVPRTG
Trigger: ACCTGTACGAGGGACAGATCACCGTCCTGCTGGGCC...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCCCGCACAGCAGCTTaGACAGAAGGTTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTARTAA*TEGCPR
Trigger: TCGTGGACAACCTTCTGTTCAAGCTGCTGTGCGGGC...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGTGTGGCCGTCCCGCGTaGAGGCACGCACGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRCGRPA*RHARRR
Trigger: CCTTCGACGTGCGTGCCTTCACGCGGGACGGCCACA...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGCCCCGGTCAGCATTTTaGAAGTCGTGGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALPRSAF*KSWSSR
Trigger: CCGGGAAGACCACGACTTTCAAAATGCTGACCGGGG...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCTAGAGAGCCCCTGGTaGTGGTCCACTCGCTACAAC +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLLESPW*WSTRYN
Trigger: GTTGTAGCGAGTGGACCAGCACCAGGGGCTCTCTAG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGACTAGAGAGCCCCTGGTaGTGGTCCACTCGCTACAAC +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRLESPW*WSTRYN
Trigger: GTTGTAGCGAGTGGACCAGCACCAGGGGCTCTCTAG...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCAGACCTTCAAACCTGTaGGTGCTCTCTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFRPSNL*VLSLGR
Trigger: CCTTCCCAGAGAGAGCACGCACAGGTTTGAAGGTCT...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGACCTTCAAACCTGTaGGTGCTCTCTCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIRPSNL*VLSLGR
Trigger: CCTTCCCAGAGAGAGCACGCACAGGTTTGAAGGTCT...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGACCCCAAAGCTGGCAATaGCCAGCTCTTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRPQSWQ*PALSAS
Trigger: AGAAGCAGAAAGAGCTGGGCATTGCCAGCTTTGGGG...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGCTGGCGCGCCTCTCGTaGTGGTACTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRLARLS*WYCRAG
Trigger: CCCTGCCCTGCAGTACCAGCACGAGAGGCGCGCCAG...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGCACATGCTTGGCCTaGACGGCCCTCTCGCTGACC +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGCTCLA*TALSLT
Trigger: GGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCA...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGAAGTCTAGAGAGCCCCTaGTGCTGGTCCACTCGCTAC +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRSLESP*CWSTRY
Trigger: GTAGCGAGTGGACCAGCACCAGGGGCTCTCTAGACT...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCGAGGTGTGCAGACGTaGCTGCTCTGTCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLRGVQT*LLCPGE
Trigger: CTCTCCAGGACAGAGCAGCCACGTCTGCACACCTCG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGACTCCCAGGTGTCTCCTaGCGGAGGGAAGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRLPGVS*RREGEE
Trigger: TTCTTCACCTTCCCTCCGCCAGGAGACACCTGGGAG...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCCGGCGGCCAGCACGCTaGACGAGCAGTTGTCGTACC +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLRRPAR*TSSCRT
Trigger: GGTACGACAACTGCTCGTCCAGCGTGCTGGCCGCCG...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCGGCGGCCAGCACGCTaGACGAGCAGTTGTCGTACC +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGRRPAR*TSSCRT
Trigger: GGTACGACAACTGCTCGTCCAGCGTGCTGGCCGCCG...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAGGGGCTCCTTGCTGTaGTTGAAGGGGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALRGSLL*LKGCSK
Trigger: CTTCGAGCACCCCTTCAACCACAGCAAGGAGCCCCT...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGAGTCTCTGGAACAGCTaGCGTGTGGCGGCATCGGCA +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLSLWNS*RVAASA
Trigger: TGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACT...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGGCCCTCCTGGAGATaGCGTCCATGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIWPSWR*RPCPRW
Trigger: CCACCTCGGGCATGGACGCCATCTCCAGGAGGGCCA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGCGCGCCTCTCGTGCTaGTACTGCAGGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRARLSC*YCRAGS
Trigger: GCTCCCTGCCCTGCAGTACCAGCACGAGAGGCGCGC...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCCACAGCCCAGTCGCTaGCGCGCCTCTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLPQPSR*RASRAG
Trigger: ACCAGCACGAGAGGCGCGCCAGCGACTGGGCTGTGG...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCCTTCTTCAGGAACATaGCCCAGAATTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLPSSGT*PRIAGS
Trigger: ACTGCCAGCAATTCTGGGCCATGTTCCTGAAGAAGG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCGGCCCTCGTTAAACTaGTCCTTGGCAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLRPSLN*SLAACR
Trigger: CCTGCAGGCTGCCAAGGACCAGTTTAACGAGGGCCG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCCAAACTGCACATGCTTaGCCTGCACGGCCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCQTAHA*PARPSR
Trigger: GCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTG...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCAGAAACTGGCCACGTaGACTCCACTCACAAACTGC +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFQKLAT*TPLTNC
Trigger: GCAGTTTGTGAGTGGAGTCCACGTGGCCAGTTTCTG...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATGCATGGTCCATTCCTaGCGGCCTGGGGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPCMVHS*RPGGLA
Trigger: AGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCA...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGGTTTGGGAACACCGTaGCCTCGCAGGACATCAGGA +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLGLGTP*PRRTSG
Trigger: TCCTGATGTCCTGCGAGGTCACGGTGTTCCCAAACC...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGGAGCGCCAGCTGCCTaGGCACAGCCATCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRGAPAA*AQPSSC
Trigger: GCAAGACGATGGCTGTGCTCAGGCAGCTGGCGCTCC...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGCGCGCACTCGCATGTTaGTCACAAGTGCCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLRALAC*SQVPCA
Trigger: TGCGCAGGGCACTTGTGATCAACATGCGAGTGCGCG...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGGGTACGGGAACCTCTTaGTGGTCACCGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALGTGTS*WSPSVS
Trigger: AGAGACTGACGGTGACCATCAAGAGGTTCCCGTACC...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGGAAGGGGTCTGCGATaGACGGCGGGTACGGGAACC +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRGRGLR*TAGTGT
Trigger: GGTTCCCGTACCCGCCGTTCATCGCAGACCCCTTCC...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTCAAAGTACTCGTTTCTaGGTGCTTTCTCGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLATVQPGWLPASSPGEIQSTRF*VLSRGH
Trigger: GTGACCCCGAGAAAGCACTCAGAAACGAGTACTTTG...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTAAATTTCATACCCGCTaGTGTATGCCCGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAAKFHTR*CMPVHW
Trigger: CCAGTGGACGGGCATACATCAGCGGGTATGAAATTT...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGAGGCTCTTCCGGATCTaGACCATGTCCTGGGAAATT +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMRLFRI*TMSWEI
Trigger: AATTTCCCAGGACATGGTTCAGATCCGGAAGAGCCT...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTACTTCCTCCATGGTGGTaGTGGATGCCCCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVLPPWW*WMPQSW
Trigger: CCAGCTTTGGGGCATCCATCACCACCATGGAGGAAG...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATTGCTCTGACAGCTGCTaGCCCAGCTGGGAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHCSDSC*PSWEVP
Trigger: CGGGACCTCCCAGCTGGGTCAGCAGCTGTCAGAGCA...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCGCCCGCACAGCAGCTTaGACAGAAGGTTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCARTAA*TEGCPR
Trigger: TCGTGGACAACCTTCTGTTCAAGCTGCTGTGCGGGC...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGTCAGAGCTGATTCTGTaGCCCCCGACAAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLSELIL*PPTKAS
Trigger: GGATGCCTTTGTCGGGGGTCACAGAATCAGCTCTGA...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCACGTCCTGTCCCTGCCTaGTGGCGAGACAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSRPVPA*WRDSRH
Trigger: GTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACG...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATTGGAGATGGCGTCCATaGCCGAGGTGGGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHWRWRP*PRWARP
Trigger: TGGACGAGCCCACCTCGGGCATGGACGCCATCTCCA...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTGGAGATGGCGTCCATaGCCGAGGTGGGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLWRWRP*PRWARP
Trigger: TGGACGAGCCCACCTCGGGCATGGACGCCATCTCCA...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTAGATGTCTTCCGGGTTaGAGTGCGGCTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTRCLPG*SAAPSP
Trigger: TGGTGAAGGAGCCGCACTGCAACCCGGAAGACATCT...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGAACATGGCCCAGAATTaGTGGCAGTGCAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLNMAQN*WQCRAS
Trigger: GCTCGCCCTGCACTGCCAGCAATTCTGGGCCATGTT...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGCCAGGATGGAGAACGTaGTGGCCAAGAATGCCATGG +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALPGWRT*WPRMPW
Trigger: CCATGGCATTCTTGGCCAGCACGTTCTCCATCCTGG...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCCTCACAAACTGCACATaGTTGGCCTGCACGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCLTNCT*LACTAL
Trigger: GAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAG...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCACGACCTCGGAGGAGGTaGAGTACCTCCGCGTCTCGT +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPRPRRR*STSASR
Trigger: ACGAGACGCGGAGGTACTGCACCTCCTCCGAGGTCG...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCAGGAGGGGCACCCGCTaGTCGTACACCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIRRGTR*SYTLES
Trigger: GCTCTCCAAGGTGTACGAGCAGCGGGTGCCCCTCCT...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCCTCCGATCAGGGCGATaGCGGTGCTCAGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLLRSGR*RCSASA
Trigger: AGCGGAAGCTGAGCACCGGCATCGCCCTGATCGGAG...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCAAGATGGGCCCTGCTTaGCCGTCCTGTCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIKMGPA*PSCPCL
Trigger: CAGGCAGGGACAGGACGGGCAAGCAGGGCCCATCTT...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGGCAACCCTGAGGTTTaGGAACACCGTGACCTCGCA +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLGNPEV*EHRDLA
Trigger: TGCGAGGTCACGGTGTTCCCAAACCTCAGGGTTGCC...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTAGTCTAGAGAGCCCCTaGTGCTGGTCCACTCGCTAC +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWASLESP*CWSTRY
Trigger: GTAGCGAGTGGACCAGCACCAGGGGCTCTCTAGACT...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGTGGCTGCTCTGTCCTaGAGAGGCAGGGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLVAALS*RGREGD
Trigger: ATCGCCTTCCCTGCCTCTCCAGGACAGAGCAGCCAC...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGGAACAGCTGGCGTGTaGCGGCATCGGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLGTAGV*RHRHGT
Trigger: AGTACCATGCCGATGCCGCCACACGCCAGCTGTTCC...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCAGCACGGCTACATTTaGCTTCACCTTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLQHGYI*LHLDTE
Trigger: TTCTGTGTCAAGGTGAAGCCAAATGTAGCCGTGCTG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCCAGCACGGCTACATTTaGCTTCACCTTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: EMLWDGARLRGDYHALRSQHGYI*LHLDTE
Trigger: TTCTGTGTCAAGGTGAAGCCAAATGTAGCCGTGCTG...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTGGGTGGTCAGCACGATaGTGCGGTCACTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAGWSAR*CGHFSA
Trigger: GGCAGAAAAGTGACCGCACCATCGTGCTGACCACCC...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGCGTTGGGCACGTGGTaGTGGACCAGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHALGTW*WTSWEM
Trigger: CATCTCCCAGCTGGTCCACCACCACGTGCCCAACGC...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTGCGTTGGGCACGTGGTaGTGGACCAGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGALGTW*WTSWEM
Trigger: CATCTCCCAGCTGGTCCACCACCACGTGCCCAACGC...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGGGCAGGGAGCTGGATaGCCTGGATGTCCATACTGC +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLGQGAG*PGCPYC
Trigger: GCAGTATGGACATCCAGGCCATCCAGCTCCCTGCCC...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGCGACGGCCAGGGCAGTaGCTGGAGAGTGGTACGCCT +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRRRPGQ*LESGTP
Trigger: AGGCGTACCACTCTCCAGCCACTGCCCTGGCCGTCG...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCAGAGAGCCAGAAACTaGCCACGTGGACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLQRARN*PRGLHS
Trigger: TGAGTGGAGTCCACGTGGCCAGTTTCTGGCTCTCTG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCACCATTCCTGGCGGCCTaGGGGCCTCGCTACAGTTCA +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPPFLAA*GPRYSS
Trigger: TGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGG...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGGGCACATTTTCCGACTaGATCTTCAAGCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALGTFSD*IFKRSQ
Trigger: CTGGCTCCGCTTGAAGATTCAGTCGGAAAATGTGCC...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCCGGCATGGTACTCCATaGTGGCCCGGTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIRHGTP*WPGPQH
Trigger: ATGCTGTGGACCGGGCCATCATGGAGTACCATGCCG...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCAAGAAGTACCAGGGCTaGGGCACGCCGAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLKKYQG*GTPNCP
Trigger: AGGGCAGTTCGGCGTGCCTCAGCCCTGGTACTTCTT...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCCTTATTTCCCACCCTaGACACCTTGGACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLPYFPP*TPWTGA
Trigger: AGCACCTGTCCAAGGTGTTCAGGGTGGGAAATAAGG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCGGGGAAAGAGACCTGTaGGCATGGAGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIGERDL*AWRGWW
Trigger: CCACCACCCTCTCCATGCTCACAGGTCTCTTTCCCC...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGTCACTTTTCTGCCGCTaGAGAAGATCCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLSLFCR*RRSQMA
Trigger: GGCCATCTGGGATCTTCTTCAGCGGCAGAAAAGTGA...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGATGCTCTGACAGCTGCTaGCCCAGCTGGGAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGCSDSC*PSWEVP
Trigger: CGGGACCTCCCAGCTGGGTCAGCAGCTGTCAGAGCA...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCTCTTCCCGGCTCCATTaGAGCCCAGCAGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLSSRLH*SPAGRS
Trigger: GCTTCGGCCTGCTGGGCTTCAATGGAGCCGGGAAGA...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATAGGCATCCCCAGAAGTaGGGCTCTCCTCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHRHPQK*GSPPRS
Trigger: TGACCGGGGAGGAGAGCCTCACTTCTGGGGATGCCT...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTTTCCGACATCAGAGCTaGTTCTGTGACCCCCGACAA +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTFRHQS*FCDPRQ
Trigger: TTGTCGGGGGTCACAGAATCAGCTCTGATGTCGGAA...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGGAGCCGAGCGTACATaGCCAGCATCTCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGGAERT*PASPGL
Trigger: CAGGCCGGGAGATGCTGGTCATGTACGCTCGGCTCC...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAGGGCGGGCGACTTCCTaGGGGTGCAGTGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSGRATS*GCSAGN
Trigger: GTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCC...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGTGTGCAGACGTGGCTaGTCTGTCCTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHVCRRG*SVLERQ
Trigger: CTGCCTCTCCAGGACAGAGCAGCCACGTCTGCACAC...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCAAACAGGATGTCGTaGTGCGGGCACAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLSNRMS*CGHRPR
Trigger: CCTGGGCCTGTGCCCGCAGCACGACATCCTGTTTGA...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCTTCCGGGTTGCAGTaGGGCTCCTTCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLSSGLQ*GSFTSV
Trigger: GACGCTGGTGAAGGAGCCGCACTGCAACCCGGAAGA...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGCCCCAAAGCTGGCAATaGCCAGCTCTTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DPGHEGWAALVHSVHTALPQSWQ*PALSAS
Trigger: AGAAGCAGAAAGAGCTGGGCATTGCCAGCTTTGGGG...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCCCTGGATGTCCATACTaGTGTCCACCAGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCPGCPY*CPPASR
Trigger: TCGGGAAGCTGGTGGACAGCAGTATGGACATCCAGG...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCAGGGCACGACGGTTCTaGCGTACTCGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLRARRF*RTRPRS
Trigger: TGACCTTGGGCGAGTACGGCAGAACCGTCGTGCCCT...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCTCCTGTCCCTCAGCCTaGAGTGCGTCTTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCSCPSA*SASFRC
Trigger: GCATCTGAAAGACGCACTGCAGGCTGAGGGACAGGA...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCCGTGCTGGCCAAGAATaGCATGGCGAAGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GLPQLWESELQSMQTWRCRAGQE*HGEEQV
Trigger: AACCTGCTCTTCGCCATGGCATTCTTGGCCAGCACG...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCGGATGTTATATTTCTTaGAGTAGTGGGCGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFGCYIS*SSGRRP
Trigger: AGGTCGCCGCCCACTACTGCAAGAAATATAACATCC...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGCCACCTTCCCTCCTGTaGCGGCTGCTTCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLPPSLL*RLLLGD
Trigger: ATCTCCTAGAAGCAGCCGGCACAGGAGGGAAGGTGG...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGCTCCACACTCATGGCTaGGTCCCAGAAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLLHTHG*VPEEAP
Trigger: TGGAGCCTCTTCTGGGACCCAGCCATGAGTGTGGAG...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGAGAGCCCCTGGTGCTaGTCCACTCGCTACAACTGC +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLESPWC*STRYNC
Trigger: GCAGTTGTAGCGAGTGGACCAGCACCAGGGGCTCTC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCAGTCTAGAGAGCCCCTaGTGCTGGTCCACTCGCTAC +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGSLESP*CWSTRY
Trigger: GTAGCGAGTGGACCAGCACCAGGGGCTCTCTAGACT...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTGGCCCGGGTAGATGGTaGCGTTGGGCACATTTTCCG +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGGPGRW*RWAHFP
Trigger: CGGAAAATGTGCCCAACGCCACCATCTACCCGGGCC...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGAAGGTTCCCTTGGTCCTaGGTTTGGGAAAAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRRFPWS*VWEKRE
Trigger: TTCCCGCTTTTCCCAAACCCAGGACCAAGGGAACCT...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCGCAGCTGGTACTGGATaGCCACGAGGAAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIAAGTG*PRGRGL
Trigger: CAGACCCCTTCCTCGTGGCCATCCAGTACCAGCTGC...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTGCAGCTGGTACTGGATaGCCACGAGGAAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGAAGTG*PRGRGL
Trigger: CAGACCCCTTCCTCGTGGCCATCCAGTACCAGCTGC...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGGGGCTGGGGGAAGTTaGAGACCACAATGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLGAGGS*RPQWRR
Trigger: ACGCCTCCATTGTGGTCTCCAACTTCCCCCAGCCCC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGCCATCCCCAGACAGTaGTTGGGCAGCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHAIPRQ*LGSTRN
Trigger: GTTCCTGGTGCTGCCCAACCACTGTCTGGGGATGGC...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGTTCCAGGACGCTGCCTaGAAAGGTCAGGTCCACGAA +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLFQDAA*KGQVHE
Trigger: TTCGTGGACCTGACCTTTCCAGGCAGCGTCCTGGAA...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTGGTTTGGGAACACCGTaGCCTCGCAGGACATCAGGA +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGGLGTP*PRRTSG
Trigger: TCCTGATGTCCTGCGAGGTCACGGTGTTCCCAAACC...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTTCACTTTTCTGCCGCTaGAGAAGATCCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWASLFCR*RRSQMA
Trigger: GGCCATCTGGGATCTTCTTCAGCGGCAGAAAAGTGA...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATCTCTCTGGGAAGGATaGAAGACAGCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPSLWEG*KTARPQ
Trigger: CTGGGGCCGAGCTGTCTTTCATCCTTCCCAGAGAGA...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTCTCTCTGGGAAGGATaGAAGACAGCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVISLWEG*KTARPQ
Trigger: CTGGGGCCGAGCTGTCTTTCATCCTTCCCAGAGAGA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATGCTCTCCCACATCTCTaGAGGACGCTGCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHALPHL*RTLPQG
Trigger: GCCTTGTGGCAGCGTCCTTCAGAGATGTGGGAGAGC...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAGAAGGTGGCGATGCCTaGCAGGATGTTGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVEGGDA*QDVEDG
Trigger: ACCATCTTCAACATCCTGTCAGGCATCGCCACCTTC...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCATCTTCCCGGCTCCATTaGAGCCCAGCAGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSSSRLH*SPAGRS
Trigger: GCTTCGGCCTGCTGGGCTTCAATGGAGCCGGGAAGA...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCCCGGTCAGCATTTTaGAAGTCGTGGTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGPRSAF*KSWSSR
Trigger: CCGGGAAGACCACGACTTTCAAAATGCTGACCGGGG...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGTCCACTCGCTACAACTaGAGGCAGAGAGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLSTRYN*RQRGVL
Trigger: AAGGACTCCTCTCTGCCTGCAGTTGTAGCGAGTGGA...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCTAGAGAGCCCCTGGTaGTGGTCCACTCGCTACAAC +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGLESPW*WSTRYN
Trigger: GTTGTAGCGAGTGGACCAGCACCAGGGGCTCTCTAG...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTAGTTCAAGTAGGCGCTaGAACCCGCAGGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTSSSRR*NPQEIG
Trigger: TCCTATTTCCTGCGGGTTGCAGCGCCTACTTGAACT...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTAAAAGGGAAGTAGTGTaGCAGCCTTCTGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LETETASSLATFPPVPAAKREVV*QPSVSF
Trigger: GAAAGAGACAGAAGGCTGGCACACTACTTCCCTTTT...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCGAAGCCTCCGAAGGCTaGTGCCATGTTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGEASEG*CHVGFA
Trigger: AGCAAAGCCAACATGGCAGCAGCCTTCGGAGGCTTC...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR GCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGTCAAACAGGATGTCGTaGTGCGGGCACAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRSNRMS*CGHRPR
Trigger: CCTGGGCCTGTGCCCGCAGCACGACATCCTGTTTGA...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGATGGCCCCACAGAGGTTaGTGTCCACAGCCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGWPHRG*CPQPSR
Trigger: GCGACTGGGCTGTGGACAGCAACCTCTGTGGGGCCA...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCCCACTGACAGTGATCTaGATGGTCCATTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGPLTVI*MVHSWR
Trigger: CCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGCTGCTTCTAGGAGATaGTGTGGGACGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGAASRR*CGTVPG
Trigger: GCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGCTGGAAACAGAGACTaGTTCGAGCCTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLAGNRD*FEPGHL
Trigger: AAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAGC...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTCAGCTCCACACTCATaGCTGGGTCCCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVISAPHS*LGPRRG
Trigger: GCCTCTTCTGGGACCCAGCCATGAGTGTGGAGCTGA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGGGTAGATGGTGGCGTTaGGCACATTTTCCGACTGAA +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLGRWWR*AHFPTE
Trigger: TTCAGTCGGAAAATGTGCCCAACGCCACCATCTACC...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCACTCCCAGGTGTCTCCTaGCGGAGGGAAGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPLPGVS*RREGEE
Trigger: TTCTTCACCTTCCCTCCGCCAGGAGACACCTGGGAG...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCCTTGGTCCTGGGTTTaGGAAAAGCGGGAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAPWSWV*EKREKG
Trigger: TCCCTTTTCCCGCTTTTCCCAAACCCAGGACCAAGG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCGGAACAGCTGGCGTGTaGCGGCATCGGCATGGTACT +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLGTAGV*RHRHGT
Trigger: AGTACCATGCCGATGCCGCCACACGCCAGCTGTTCC...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGTCACCGTCAGTCTCTaGAACAGCTGGCGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRVTVSL*NSWRVA
Trigger: CGCCACACGCCAGCTGTTCCAGAGACTGACGGTGAC...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCACCCTGCAACCGCCCTTaGCTTCCCACACCAATAGGA +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPPCNRP*LPTPIG
Trigger: TCCTATTGGTGTGGGAAGCCAAGGGCGGTTGCAGGG...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGGTGGTGGACCAGCTaGGAGATGTCTTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIWWWTS*EMSSGL
Trigger: CAACCCGGAAGACATCTCCCAGCTGGTCCACCACCA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATTTGGGCACGTGGTGGTaGACCAGCTGGGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHLGTWW*TSWEMS
Trigger: AGACATCTCCCAGCTGGTCCACCACCACGTGCCCAA...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCAGGTCAGCCTCAGCATaGGGTCGTCGAAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLRSASA*GRRRAP
Trigger: CGGAGCTCTTCGACGACCCCATGCTGAGGCTGACCT...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGGATGGAGAACGTGCTaGCCAAGAATGCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLGWRTC*PRMPWR
Trigger: TCGCCATGGCATTCTTGGCCAGCACGTTCTCCATCC...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCAGAAACTGGCCACGTaGACTCCACTCACAAACTGC +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLQKLAT*TPLTNC
Trigger: GCAGTTTGTGAGTGGAGTCCACGTGGCCAGTTTCTG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCGCCTCGTGTAGGCAGTaGCCGCCCCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLASCRQ*PPPRRR
Trigger: TCTTCTTCTTGGGGGCGGCCACTGCCTACACGAGGC...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATGCCTCGTGTAGGCAGTaGCCGCCCCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHASCRQ*PPPRRR
Trigger: TCTTCTTCTTGGGGGCGGCCACTGCCTACACGAGGC...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGATAATCAGAGGTGTGTaGAGCAGGGAGTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLIIRGV*SRESGL
Trigger: CAGTCCGGACTCCCTGCTCCACACACCTCTGATTAT...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGTTCCAGGACGCTGCCTaGAAAGGTCAGGTCCACGAA +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLFQDAA*KGQVHE
Trigger: TTCGTGGACCTGACCTTTCCAGGCAGCGTCCTGGAA...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCTGAGGGTGCAGTGCTaGAAACAGAGACTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWALRVQC*KQRLLR
Trigger: TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCTGAGGGTGCAGTGCTaGAAACAGAGACTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLLRVQC*KQRLLR
Trigger: TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
3UTR CAA 72 bp CTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTaGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPPQGRLVSCVN*DKSLGPLSREC
Trigger: GCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTACGGGAACCTCTTaGTGGTCACCGTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHGTGTS*WSPSVS
Trigger: AGAGACTGACGGTGACCATCAAGAGGTTCCCGTACC...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCATTTGGCTTCACCTTaGCACAGAAGAGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAHLASP*HRRAGS
Trigger: TGACCCTGCTCTTCTGTGTCAAGGTGAAGCCAAATG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATCACCGTATTTCTGCTTaGGGAACAGCGAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHHRISA*GTARTR
Trigger: GCGGGTCCTCGCTGTTCCTCAAGCAGAAATACGGTG...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCCCTCCACAGAAGCCCTaGAGATCAAGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGPPQKP*RSRTPP
Trigger: TGGAGGAGTTCTTGATCTTCAGGGCTTCTGTGGAGG...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATGGCGAAGAGCAGGTTaGGGGCAATGTCGAATCCCT +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPWRRAG*GQCRIP
Trigger: AGGGATTCGACATTGCCCTCAACCTGCTCTTCGCCA...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGTCTCGTAGAAACTGCTaGCTGCCATCCCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLSRRNC*LPSPDS
Trigger: ACTGTCTGGGGATGGCAGTCAGCAGTTTCTACGAGA...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCACGCAGAGGATGCCCCTaGGTCTCTGAAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSRRGCP*VSEAGW
Trigger: CCAACCTGCTTCAGAGACTCAGGGGCATCCTCTGCG...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGTTCCGACATCAGAGCTaGTTCTGTGACCCCCGACAA +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLFRHQS*FCDPRQ
Trigger: TTGTCGGGGGTCACAGAATCAGCTCTGATGTCGGAA...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCACAGGACATCAGGAGGTaGCCAGGGCTCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSQDIRR*PGLTGM
Trigger: CATGCCTGTGAGCCCTGGGCACCTCCTGATGTCCTG...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCCTCCTTTCCTTCTCCTaGACGACAGCACGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVILLSFS*TTARAM
Trigger: CATTGCCCGTGCTGTCGTGCAGGAGAAGGAAAGGAG...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGCCTCCGAAGGCTGCTaGCATGTTGGCTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLASEGC*HVGFAE
Trigger: TTCAGCAAAGCCAACATGGCAGCAGCCTTCGGAGGC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR GCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCAACACCTTGGACAGGTaGTTGATCTTGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGNTLDR*LILIPA
Trigger: GGCGGGGATCAAGATCAAGCACCTGTCCAAGGTGTT...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCACCGGCACCGTATTTCTaGTTGAGGAACAGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPPAPYF*LRNSED
Trigger: GTCCTCGCTGTTCCTCAAGCAGAAATACGGTGCCGG...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCCATGGTGGTGATGGATaGCCCAAAGCTGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIHGGDG*PKAGNA
Trigger: GGCATTGCCAGCTTTGGGGCATCCATCACCACCATG...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCTGGATGTCCATACTaGTGTCCACCAGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGPGCPY*CPPASR
Trigger: TCGGGAAGCTGGTGGACAGCAGTATGGACATCCAGG...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGCAGAATTGCTGGCAGTaGAGGGCGAGCCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRQNCWQ*RASPVL
Trigger: CAACACTGGGCTCGCCCTGCACTGCCAGCAATTCTG...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCTCACAAACTGCACATaGTTGGCCTGCACGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLLTNCT*LACTAL
Trigger: GAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAG...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGCTGGAAACAGAGACTaGTTCGAGCCTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLAGNRD*FEPGHL
Trigger: AAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAGC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCAGGTTCCCTTGGTCCTaGGTTTGGGAAAAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGRFPWS*VWEKRE
Trigger: TTCCCGCTTTTCCCAAACCCAGGACCAAGGGAACCT...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAATGGCCCAGAATTGCTaGCAGTGCAGGGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSMAQNC*QCRASP
Trigger: TGGGCTCGCCCTGCACTGCCAGCAATTCTGGGCCAT...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCCTTCTTCAGGAACATaGCCCAGAATTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAPSSGT*PRIAGS
Trigger: ACTGCCAGCAATTCTGGGCCATGTTCCTGAAGAAGG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGCAGTGGCTGGAGAGTaGTACGCCTGGTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLAVAGE*YAWLLN
Trigger: GTTCAACAACCAGGCGTACCACTCTCCAGCCACTGC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCGTCCGCTACATCTTaGTCCTCAGGAAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLSSATS*SSGSTG
Trigger: GCCTGTGCTTCCTGAGGACCAAGATGTAGCGGACGA...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGATAATCAGAGGTGTGTaGAGCAGGGAGTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLIIRGV*SRESGL
Trigger: CAGTCCGGACTCCCTGCTCCACACACCTCTGATTAT...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATCACTCCTCCATGCTGTaGGAGGTGATGATGATGGCC +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHHSSML*EVMMMA
Trigger: GGCCATCATCATCACCTCCCACAGCATGGAGGAGTG...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATAGAGAGGATGTAAGATaGGCCCTGCTTGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHREDVR*ALLARP
Trigger: AGGACGGGCAAGCAGGGCCCATCTTACATCCTCTCT...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATTCTCCAGGGAGTGCCTaGAGAAATTCAACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHSPGSA*RNSTPS
Trigger: GCTGGGGGTTGAATTTCTCCAGGCACTCCCTGGAGA...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGAAGGAGAAACGTGCTCTaGAAACTGAGTGTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRRRNVL*KLSVKR
Trigger: CCTCTTTACACTCAGTTTTCAGAGCACGTTTCTCCT...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGACACCGTATTTCTGCTTaGGGAACAGCGAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGHRISA*GTARTR
Trigger: GCGGGTCCTCGCTGTTCCTCAAGCAGAAATACGGTG...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCCCTCCACAGAAGCCCTaGAGATCAAGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLPPQKP*RSRTPP
Trigger: TGGAGGAGTTCTTGATCTTCAGGGCTTCTGTGGAGG...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATGCCTGACAGGATGTTaGAGATGGTCAGCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPCLTGC*RWSASC
Trigger: ACACGAGGCTGACCATCTTCAACATCCTGTCAGGCA...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTGAAGGTGGCGATGCCTaGCAGGATGTTGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGEGGDA*QDVEDG
Trigger: ACCATCTTCAACATCCTGTCAGGCATCGCCACCTTC...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCAGCACCAGGAACACGTaGTCCAGGGTTTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGSTRNT*SRVLES
Trigger: ACTTTCCAAAACCCTGGATCACGTGTTCCTGGTGCT...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGAAAAAGGGAAGTAGTGTaGCAGCCTTCTGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRKREVV*QPSVSF
Trigger: GAAAGAGACAGAAGGCTGGCACACTACTTCCCTTTT...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTATCTCTGAAGGACGCTaGCACAAGGCACCGCTCATT +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGISEGR*HKAPLI
Trigger: AATGAGCGGTGCCTTGTGGCAGCGTCCTTCAGAGAT...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTGGATGTTATATTTCTTaGAGTAGTGGGCGGCGACCT +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAGCYIS*SSGRRP
Trigger: AGGTCGCCGCCCACTACTGCAAGAAATATAACATCC...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTGTGAACTCCAGAGTATaGAGACATGGAGATGCGCAT +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAVNSRV*RHGDAH
Trigger: ATGCGCATCTCCATGTCTGCATACTCTGGAGTTCAC...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGACTCCACACTCATGGCTaGGTCCCAGAAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGLHTHG*VPEEAP
Trigger: TGGAGCCTCTTCTGGGACCCAGCCATGAGTGTGGAG...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCTCCTTGACTCACAGTaGAAGAGTTTCAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLLLDSQ*KSFRFS
Trigger: ACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAACGGCGGCCAGCACGCTaGACGAGCAGTTGTCGTACC +
Preference number: 4 (lower is better)
Translates to: IAALFTTAKTWNQAKCPERRPAR*TSSCRT
Trigger: GGTACGACAACTGCTCGTCCAGCGTGCTGGCCGCCG...TTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCGGATGTAGGTTCCCTTaGTCCTGGGTTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGGCRFP*SWVWEK
Trigger: CTTTTCCCAAACCCAGGACCAAGGGAACCTACATCC...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCCAGGAGCAGAGCTTCTaGCTCAGAGTCATCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLQEQSF*LRVIQL
Trigger: CAACTGGATGACTCTGAGCCAGAAGCTCTGCTCCTG...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR CCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAGGGTGGTCAGCACGATaGTGCGGTCACTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSGWSAR*CGHFSA
Trigger: GGCAGAAAAGTGACCGCACCATCGTGCTGACCACCC...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGATGCAGGGCAGGGAGCTaGATGGCCTGGATGTCCATA +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGCRAGS*MAWMSI
Trigger: TATGGACATCCAGGCCATCCAGCTCCCTGCCCTGCA...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGGAGAGTGGTACGCCTaGTTGTTGAACAAGGCGTTG +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLGEWYA*LLNKAL
Trigger: CAACGCCTTGTTCAACAACCAGGCGTACCACTCTCC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAATCAGCATTTATTTTCTaGATGGTCACAACGTATTCA +
Preference number: 4 (lower is better)
Translates to: VVPACPGAGDFLRVQCWKSAFIF*MVTTYS
Trigger: TGAATACGTTGTGACCATCCAGAAAATAAATGCTGA...TTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGGACACGCAGGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGGAGCGCCAGCTGCCTaGGCACAGCCATCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPGAPAA*AQPSSC
Trigger: GCAAGACGATGGCTGTGCTCAGGCAGCTGGCGCTCC...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCAAAGTACTCGTTTCTaGGTGCTTTCTCGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGQSTRF*VLSRGH
Trigger: GTGACCCCGAGAAAGCACTCAGAAACGAGTACTTTG...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATAAATTTCATACCCGCTaGTGTATGCCCGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHKFHTR*CMPVHW
Trigger: CCAGTGGACGGGCATACATCAGCGGGTATGAAATTT...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATAGGCTCTTCCGGATCTaGACCATGTCCTGGGAAATT +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHRLFRI*TMSWEI
Trigger: AATTTCCCAGGACATGGTTCAGATCCGGAAGAGCCT...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTAGCACCAGGAACACGTaGTCCAGGGTTTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGSTRNT*SRVLES
Trigger: ACTTTCCAAAACCCTGGATCACGTGTTCCTGGTGCT...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAATGCCCCTGAGTCTCTaGAGCAGGTTGGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSMPLSL*SRLVSM
Trigger: CATCGAGACCAACCTGCTTCAGAGACTCAGGGGCAT...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCTCCACTCGCTACAACTaGAGGCAGAGAGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLSTRYN*RQRGVL
Trigger: AAGGACTCCTCTCTGCCTGCAGTTGTAGCGAGTGGA...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATAGTTCAAGTAGGCGCTaGAACCCGCAGGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHSSSRR*NPQEIG
Trigger: TCCTATTTCCTGCGGGTTGCAGCGCCTACTTGAACT...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCATGTTGATCACAAGTaGCCTGCGCACTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGHVDHK*PAHCLS
Trigger: ACTGAGACAGTGCGCAGGGCACTTGTGATCAACATG...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CACGTATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCACTGTGGTTGAAGGGGTaGTCGAAGACCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HVCLLRHYSQQQRLGTKPLWLKG*SKTTAA
Trigger: GGCCGCCGTGGTCTTCGAGCACCCCTTCAACCACAG...TGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACATACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGAACACCTTGGACAGGTaGTTGATCTTGATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRNTLDR*LILIPA
Trigger: GGCGGGGATCAAGATCAAGCACCTGTCCAAGGTGTT...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCACTCCACTCACAAACTaGACATGCTTGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLTPLTN*TCLACT
Trigger: CGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAGT...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAGGTAGATGGTGGCGTTaGGCACATTTTCCGACTGAA +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPGRWWR*AHFPTE
Trigger: TTCAGTCGGAAAATGTGCCCAACGCCACCATCTACC...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAAAGTTCTCCTGGTACTaGATGTTATATTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PLTVICMVHSWRPGGLATKFSWY*MLYFLQ
Trigger: CTGCAAGAAATATAACATCCAGTACCAGGAGAACTT...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCATCTCCAGGGAGTGCCTaGAGAAATTCAACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSSPGSA*RNSTPS
Trigger: GCTGGGGGTTGAATTTCTCCAGGCACTCCCTGGAGA...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCGCGGAAAAGCCTCCTTaGCTCACAGTGGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLAEKPP*LTVEEF
Trigger: AAACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGC...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCATCAAGCGGAGCCAGATaGGGATCCCAGAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSSSGAR*GSQKTA
Trigger: TGCTGTTTTCTGGGATCCTCATCTGGCTCCGCTTGA...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCATCTCGTAGAAACTGCTaGCTGCCATCCCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSSRRNC*LPSPDS
Trigger: ACTGTCTGGGGATGGCAGTCAGCAGTTTCTACGAGA...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCAGTTTCAGGTTCAGTTaGTCAGCTCCACACTCATGG +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLSFRFS*SAPHSW
Trigger: CCATGAGTGTGGAGCTGAGCAACTGAACCTGAAACT...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATTCAGCGTCCTTCATGTaGGGAAAAGCCTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHSASFM*GKASLT
Trigger: AGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGA...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCGTGTGCAGACGTGGCTaGTCTGTCCTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VYCGTIHNSKDLEPSQMSVCRRG*SVLERQ
Trigger: CTGCCTCTCCAGGACAGAGCAGCCACGTCTGCACAC...GGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATCATGTTGATCACAAGTaGCCTGCGCACTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: HLITVSSFPPLTVICMVHHVDHK*PAHCLS
Trigger: ACTGAGACAGTGCGCAGGGCACTTGTGATCAACATG...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCGTACTCGTTTCTGAGTaGTTTCTCGGGGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLVLVSE*FLGVTV
Trigger: GACAGTGACCCCGAGAAAGCACTCAGAAACGAGTAC...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAACTCCACTCACAAACTaGACATGCTTGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGTPLTN*TCLACT
Trigger: CGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAGT...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCGAGAGCCCCTGGTGCTaGTCCACTCGCTACAACTGC +
Preference number: 4 (lower is better)
Translates to: VYCGTIHNSKDLEPSQMSESPWC*STRYNC
Trigger: GCAGTTGTAGCGAGTGGACCAGCACCAGGGGCTCTC...GGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp ATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAAGGCAGGGAAGGCGATaGAGGAGGGGCAGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: IAALFTTAKTWNQAKCPERQGRR*RRGSLE
Trigger: CTCTAGACTGCCCCTCCTCCATCGCCTTCCCTGCCT...TTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp TTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAACGAGGTGTGCAGACGTaGCTGCTCTGTCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRHYSQQQRLGTKPNVLKRGVQT*LLCPGE
Trigger: CTCTCCAGGACAGAGCAGCCACGTCTGCACACCTCG...TTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CACGTATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAGGCCCGGGTAGATGGTaGCGTTGGGCACATTTTCCG +
Preference number: 4 (lower is better)
Translates to: HVCLLRHYSQQQRLGTKPGPGRW*RWAHFP
Trigger: CGGAAAATGTGCCCAACGCCACCATCTACCCGGGCC...TGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACATACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAAATTTCCCAATGAGCTaGGCTCCCATTGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSNFPMS*APIAMA
Trigger: CGCCATGGCAATGGGAGCCCAGCTCATTGGGAAATT...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR CCA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATTCCAGTTTTACAGCTaGGATGCGCATGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPFQFYS*DAHDGD
Trigger: GTCACCATCATGCGCATCCCAGCTGTAAAACTGGAA...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTTCCAGTTTTACAGCTaGGATGCGCATGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIFQFYS*DAHDGD
Trigger: GTCACCATCATGCGCATCCCAGCTGTAAAACTGGAA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGTCAGCATTTATTTTCTaGATGGTCACAACGTATTCA +
Preference number: 4 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMSAFIF*MVTTYS
Trigger: TGAATACGTTGTGACCATCCAGAAAATAAATGCTGA...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTCGCGCACTCGCATGTTaGTCACAAGTGCCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPRALAC*SQVPCA
Trigger: TGCGCAGGGCACTTGTGATCAACATGCGAGTGCGCG...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp GTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCGGGGCTGCCCCCATATaGCTGTCACTAGTCAACAGC +
Preference number: 4 (lower is better)
Translates to: VYCGTIHNSKDLEPSQMSGAAPI*LSLVNS
Trigger: GCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCC...GGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCAAAAGGGAAGTAGTGTaGCAGCCTTCTGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLKREVV*QPSVSF
Trigger: GAAAGAGACAGAAGGCTGGCACACTACTTCCCTTTT...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CACGTATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCATCAGCTCCACACTCATaGCTGGGTCCCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HVCLLRHYSQQQRLGTKPSAPHS*LGPRRG
Trigger: GCCTCTTCTGGGACCCAGCCATGAGTGTGGAGCTGA...TGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACATACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp ATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAAGGGGCTCCTTGCTGTaGTTGAAGGGGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: IAALFTTAKTWNQAKCPERGSLL*LKGCSK
Trigger: CTTCGAGCACCCCTTCAACCACAGCAAGGAGCCCCT...TTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAGGATGTAGGTTCCCTTaGTCCTGGGTTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSGCRFP*SWVWEK
Trigger: CTTTTCCCAAACCCAGGACCAAGGGAACCTACATCC...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCCATTCTGTGCATACTaGCTTGAATTTTTCATATCC +
Preference number: 4 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAPFCAY*LEFFIS
Trigger: GGATATGAAAAATTCAAGGCAGTATGCACAGAATGG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTCTCCACACTCATGGCTaGGTCCCAGAAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPLHTHG*VPEEAP
Trigger: TGGAGCCTCTTCTGGGACCCAGCCATGAGTGTGGAG...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAAGGAGAAACGTGCTCTaGAAACTGAGTGTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGRRNVL*KLSVKR
Trigger: CCTCTTTACACTCAGTTTTCAGAGCACGTTTCTCCT...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR TCA 90 bp CACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAAAGTATTCAGCCATCGTCTTGCTaGAAGGGACGCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HYSQQQRLGTKPNVLKSIQPSSC*KGRPVL
Trigger: CAGCACTGGGCGTCCCTTTCAGCAAGACGATGGCTG...AATACTTTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp TTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAAGGCACATTTTCCGACTaGATCTTCAAGCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRHYSQQQRLGTKPNVLKGTFSD*IFKRSQ
Trigger: CTGGCTCCGCTTGAAGATTCAGTCGGAAAATGTGCC...TTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp TTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAATCCACTCGCTACAACTaGAGGCAGAGAGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LRHYSQQQRLGTKPNVLKSTRYN*RQRGVL
Trigger: AAGGACTCCTCTCTGCCTGCAGTTGTAGCGAGTGGA...TTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGAAATAAAGGTGCTCTaGGACTGTCAAGTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHEIKVL*DCQVVK
Trigger: TTTGACAACTTGACAGTCGCAGAGCACCTTTATTTC...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCACTCCTTGACTCACAGTaGAAGAGTTTCAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: HEGWAALVHSVHTALNFSLLDSQ*KSFRFS
Trigger: ACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAG...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp CACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAAAGTATTGTGGCTGCTCTGTCCTaGAGAGGCAGGGAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: HYSQQQRLGTKPNVLKSIVAALS*RGREGD
Trigger: ATCGCCTTCCCTGCCTCTCCAGGACAGAGCAGCCAC...AATACTTTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp TTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAACCTTGGTCCTGGGTTTaGGAAAAGCGGGAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LRHYSQQQRLGTKPNVLKPWSWV*EKREKG
Trigger: TCCCTTTTCCCGCTTTTCCCAAACCCAGGACCAAGG...TTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTTCAAGCGGAGCCAGATaGGGATCCCAGAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPSSGAR*GSQKTA
Trigger: TGCTGTTTTCTGGGATCCTCATCTGGCTCCGCTTGA...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp CACGTATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCATCAGCGTCCTTCATGTaGGGAAAAGCCTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: HVCLLRHYSQQQRLGTKPSASFM*GKASLT
Trigger: AGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGA...TGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACATACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp CACGTATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAGTTCAAGTAGGCGCTaGAACCCGCAGGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: HVCLLRHYSQQQRLGTKPSSSRR*NPQEIG
Trigger: TCCTATTTCCTGCGGGTTGCAGCGCCTACTTGAACT...TGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACATACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp ATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTACTGGCCCGGGTAGATaGTGGCGTTGGGCACATTTT +
Preference number: 4 (lower is better)
Translates to: MFIAALFTTAKTWNQAKCTGPGR*WRWAHF
Trigger: AAAATGTGCCCAACGCCACCATCTACCCGGGCCAGT...ACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp ATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAGGATGTAGGTTCCCTTaGTCCTGGGTTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: IAALFTTAKTWNQAKCPEGCRFP*SWVWEK
Trigger: CTTTTCCCAAACCCAGGACCAAGGGAACCTACATCC...TTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCAAGTTCTCCTGGTACTaGATGTTATATTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIKFSWY*MLYFLQ
Trigger: CTGCAAGAAATATAACATCCAGTACCAGGAGAACTT...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTCATGTTGATCACAAGTaGCCTGCGCACTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPHVDHK*PAHCLS
Trigger: ACTGAGACAGTGCGCAGGGCACTTGTGATCAACATG...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGAAATAAAGGTGCTCTaGGACTGTCAAGTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGEIKVL*DCQVVK
Trigger: TTTGACAACTTGACAGTCGCAGAGCACCTTTATTTC...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR GCA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGACCATTCTGTGCATACTaGCTTGAATTTTTCATATCC +
Preference number: 4 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGPFCAY*LEFFIS
Trigger: GGATATGAAAAATTCAAGGCAGTATGCACAGAATGG...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CCA 90 bp ATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTGGTAGATGGTGGCGTTaGGCACATTTTCCGACTGAA +
Preference number: 4 (lower is better)
Translates to: MFIAALFTTAKTWNQAKCGRWWR*AHFPTE
Trigger: TTCAGTCGGAAAATGTGCCCAACGCCACCATCTACC...ACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp GTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCAATACTTTTGCAAAGTaGGGCTGCCCCCATATGACT +
Preference number: 4 (lower is better)
Translates to: VYCGTIHNSKDLEPSQMSNTFAK*GCPHMT
Trigger: AGTCATATGGGGGCAGCCCCACTTTGCAAAAGTATT...GGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR GCA 90 bp CACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAAAGTATTTTTGCAAAGTGGGGCTaGCCCCATATGACTGTCACT +
Preference number: 4 (lower is better)
Translates to: HYSQQQRLGTKPNVLKSIFAKWG*PHMTVT
Trigger: AGTGACAGTCATATGGGGGCAGCCCCACTTTGCAAA...AATACTTTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CCA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTCTCCTTGACTCACAGTaGAAGAGTTTCAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPLLDSQ*KSFRFS
Trigger: ACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAG...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR TCA 90 bp TTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAACCAAGCCAAATGTCCTaGAAAGTATTTCTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LRHYSQQQRLGTKPNVLKPSQMS*KVFLQE
Trigger: TTCTTGAAGAAATACTTTTCAGGACATTTGGCTTGG...TTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS TCA 90 bp CTCGGCCACCCGGGCTCCGCTCCAGCCTCGCAGTGGCGGCGGCACTaGCAGCTGCGTGGCCGCCCTGGAGGGGAGGGTGCGCCTGCAACC +
Preference number: 5 (lower is better)
Translates to: LGHPGSAPASQWRRH*QLRGRPGGEGAPAT
Trigger: GGTTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGCGAGGCTGGAGCGGAGCCCGGGTGGCCGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 90 bp GGGCTCCGCTCCAGCCTCGCAGTGGCGGCGGCACTGACAGCTGCGTaGCCGCCCTGGAGGGGAGGGTGCGCCTGCAACCCGCTACTGGCG +
Preference number: 5 (lower is better)
Translates to: GLRSSLAVAAALTAA*PPWRGGCACNPLLA
Trigger: CGCCAGTAGCGGGTTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGCGAGGCTGGAGCGGAGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382381.7
CDS GCA 90 bp ACCCGGGCTCCGCTCCAGCCTCGCAGTGGCGGCGGCACTGACAGCTaGGTGGCCGCCCTGGAGGGGAGGGTGCGCCTGCAACCCGCTACT +
Preference number: 5 (lower is better)
Translates to: TRAPLQPRSGGGTDS*VAALEGRVRLQPAT
Trigger: AGTAGCGGGTTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGCGAGGCTGGAGCGGAGCCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 90 bp TCCAGCCTCGCAGTGGCGGCGGCACTGACAGCTGCGTGGCCGCCCTaGAGGGGAGGGTGCGCCTGCAACCCGCTACTGGCGGACGCAGCG +
Preference number: 5 (lower is better)
Translates to: SSLAVAAALTAAWPP*RGGCACNPLLADAA
Trigger: CGCTGCGTCCGCCAGTAGCGGGTTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGCGAGGCTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382381.7
CDS TCA 90 bp CGACCCATGCGGTGTGAGCCGCTGCCCGCCCTCTGCCCGGTGTGCTaGCTCTCCCGGACCCTGTTTGCGCCCTCGCAGACTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RPMRCEPLPALCPVC*LSRTLFAPSQTLLC
Trigger: GCAGAGGAGAGTCTGCGAGGGCGCAAACAGGGTCCGGGAGAGTCAGCACACCGGGCAGAGGGCGGGCAGCGGCTCACACCGCATGGGTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 90 bp AGCTCGGCCCCAGCGCTGCTCTCCAGCGTGGCGTTGGGCACGTGGTaGTGGACCAGCTGGGAGATGTCTTCCGGGTTGCAGTGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSAPALLSSVALGTW*WTSWEMSSGLQCGS
Trigger: GGAGCCGCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp GACAGCTCGGCCCCAGCGCTGCTCTCCAGCGTGGCGTTGGGCACGTaGTGGTGGACCAGCTGGGAGATGTCTTCCGGGTTGCAGTGCGGC +
Preference number: 5 (lower is better)
Translates to: DSSAPALLSSVALGT*WWTSWEMSSGLQCG
Trigger: GCCGCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGAGCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS-3UTR CAA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCCGGGGCTGGGGGAAGTaGGAGACCACAATGGAGGCG +
Preference number: 5 (lower is better)
Translates to: MGPACPSCPCLMARQPPPRGWGK*ETTMEA
Trigger: CGCCTCCATTGTGGTCTCCAACTTCCCCCAGCCCCG...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp CAGGTTGGTCTCGATGAGGAAGAGCAGGATGAGGTAGGCGCACCCTaGGGCGGCCATGGAGGCCACAAACCGGCCGACCCCCGGGGCGCT +
Preference number: 5 (lower is better)
Translates to: QVGLDEEEQDEVGAP*GGHGGHKPADPRGA
Trigger: AGCGCCCCGGGGGTCGGCCGGTTTGTGGCCTCCATGGCCGCCTCAGGGTGCGCCTACCTCATCCTGCTCTTCCTCATCGAGACCAACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
ENST00000569062.1
CDS TCA 90 bp GACCCTGTTTGCGCCCTCGCAGACTCTCCTCTGCATGGGCTTACATaGGGCGTTTGGGGGCTGCTCGCCCTTCCCCCGCCACCCGCCCAC +
Preference number: 5 (lower is better)
Translates to: DPVCALADSPLHGLT*GVWGLLALPPPPAH
Trigger: GTGGGCGGGTGGCGGGGGAAGGGCGAGCAGCCCCCAAACGCCTCATGTAAGCCCATGCAGAGGAGAGTCTGCGAGGGCGCAAACAGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 90 bp TCGGCCCCAGCGCTGCTCTCCAGCGTGGCGTTGGGCACGTGGTGGTaGACCAGCTGGGAGATGTCTTCCGGGTTGCAGTGCGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SAPALLSSVALGTWW*TSWEMSSGLQCGSF
Trigger: GAAGGAGCCGCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp AGGGGTCCATGGCCCCACAGAGGTTGCTGTCCACAGCCCAGTCGCTaGCGCGCCTCTCGTGCTGGTACTGCAGGGCAGGGAGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: RGPWPHRGCCPQPSR*RASRAGTAGQGAGW
Trigger: CCATCCAGCTCCCTGCCCTGCAGTACCAGCACGAGAGGCGCGCCAGCGACTGGGCTGTGGACAGCAACCTCTGTGGGGCCATGGACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS-3UTR CAA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCATGGCCCCACAGAGGTaGCTGTCCACAGCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: TATQPLGWSLRVLGRATSMAPQR*LSTAQS
Trigger: CGACTGGGCTGTGGACAGCAACCTCTGTGGGGCCAT...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCGGGGCTGGGGGAAGTaGGAGACCACAATGGAGGCG +
Preference number: 5 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQRGWGK*ETTMEA
Trigger: CGCCTCCATTGTGGTCTCCAACTTCCCCCAGCCCCG...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGACAGAGACCCCGGAGCTaGCCCGCAGACTGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRQRPRS*PADCPA
Trigger: GGCCGGGCAGTCTGCGGGCAAGCTCCGGGGTCTCTG...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp CCAGTTGCTCCATTCAAACGCTTCTCCCTGCCGACCCATGCGGTGTaGGCCGCTGCCCGCCCTCTGCCCGGTGTGCTGACTCTCCCGGAC +
Preference number: 5 (lower is better)
Translates to: PVAPFKRFSLPTHAV*AAARPLPGVLTLPD
Trigger: GTCCGGGAGAGTCAGCACACCGGGCAGAGGGCGGGCAGCGGCTCACACCGCATGGGTCGGCAGGGAGAAGCGTTTGAATGGAGCAACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 90 bp GCGCTGCTCTCCAGCGTGGCGTTGGGCACGTGGTGGTGGACCAGCTaGGAGATGTCTTCCGGGTTGCAGTGCGGCTCCTTCACCAGCGTC +
Preference number: 5 (lower is better)
Translates to: ALLSSVALGTWWWTS*EMSSGLQCGSFTSV
Trigger: GACGCTGGTGAAGGAGCCGCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp GACTCTCCCGGACCCTGTTTGCGCCCTCGCAGACTCTCCTCTGCATaGGCTTACATGAGGCGTTTGGGGGCTGCTCGCCCTTCCCCCGCC +
Preference number: 5 (lower is better)
Translates to: DSPGPCLRPRRLSSA*AYMRRLGAARPSPA
Trigger: GGCGGGGGAAGGGCGAGCAGCCCCCAAACGCCTCATGTAAGCCCATGCAGAGGAGAGTCTGCGAGGGCGCAAACAGGGTCCGGGAGAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS-3UTR CAA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGCTCTCCAGCGTGGCGTaGGGCACGTGGTGGTGGACC +
Preference number: 5 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLLSSVA*GTWWWT
Trigger: GGTCCACCACCACGTGCCCAACGCCACGCTGGAGAG...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCACAAACTGCACATGCTaGGCCTGCACGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: MGPACPSCPCLMARQPPPTNCTC*ACTALS
Trigger: CGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGT...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 90 bp TCCATTCAAACGCTTCTCCCTGCCGACCCATGCGGTGTGAGCCGCTaGCCGCCCTCTGCCCGGTGTGCTGACTCTCCCGGACCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: SIQTLLPADPCGVSR*PPSARCADSPGPCL
Trigger: CAAACAGGGTCCGGGAGAGTCAGCACACCGGGCAGAGGGCGGGCAGCGGCTCACACCGCATGGGTCGGCAGGGAGAAGCGTTTGAATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 90 bp CGCTGGCGCGCCTCTCGTGCTGGTACTGCAGGGCAGGGAGCTGGATaGCCTGGATGTCCATACTGCTGTCCACCAGCTTCCCGACCCGAA +
Preference number: 5 (lower is better)
Translates to: RWRASRAGTAGQGAG*PGCPYCCPPASRPE
Trigger: TTCGGGTCGGGAAGCTGGTGGACAGCAGTATGGACATCCAGGCCATCCAGCTCCCTGCCCTGCAGTACCAGCACGAGAGGCGCGCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS-3UTR CAA 90 bp GAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGCCCTAAGGAGCAGCGGCAGGGGCTCCTaGCTGTGGTTGAAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: EMLWDGARLRGDYHALRSSGRGS*LWLKGC
Trigger: GCACCCCTTCAACCACAGCAAGGAGCCCCTGCCGCT...GCTCCTTAGGGCATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCGCACCGTATTTCTGCTaGAGGAACAGCGAGGACCCG +
Preference number: 5 (lower is better)
Translates to: TATQPLGWSLRVLGRATSAPYFC*RNSEDP
Trigger: CGGGTCCTCGCTGTTCCTCAAGCAGAAATACGGTGC...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp ATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTGATGGCGAGACAGCCGCCACCCTTGTTGAACAAGGCGTaGACGACCGTGCGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: MGPACPSCPCLMARQPPPLLNKA*TTVRSP
Trigger: GGGAGAGCGCACGGTCGTCAACGCCTTGTTCAACAA...GGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGCAGAGACCCCGGAGCTaGCCCGCAGACTGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLQRPRS*PADCPA
Trigger: GGCCGGGCAGTCTGCGGGCAAGCTCCGGGGTCTCTG...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp GTAGGTGATATTTCACCGCCAGCGGCAGGGGCTCCTTGCTGTGGTTaGAGGGGTGCTCGAAGACCACGGCGGCCAGCACGCTGGACGAGC +
Preference number: 5 (lower is better)
Translates to: VGDISPPAAGAPCCG*RGARRPRRPARWTS
Trigger: GCTCGTCCAGCGTGCTGGCCGCCGTGGTCTTCGAGCACCCCTTCAACCACAGCAAGGAGCCCCTGCCGCTGGCGGTGAAATATCACCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 90 bp ACCCTGAGGTTTGGGAACACCGTGACCTCGCAGGACATCAGGAGGTaGCCAGGGCTCACAGGCATGACTCTCCAGCACCGAGCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: TLRFGNTVTSQDIRR*PGLTGMTLQHRAWA
Trigger: CGCCCAGGCTCGGTGCTGGAGAGTCATGCCTGTGAGCCCTGGGCACCTCCTGATGTCCTGCGAGGTCACGGTGTTCCCAAACCTCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 90 bp TATTTCACCGCCAGCGGCAGGGGCTCCTTGCTGTGGTTGAAGGGGTaGTCGAAGACCACGGCGGCCAGCACGCTGGACGAGCAGTTGTCG +
Preference number: 5 (lower is better)
Translates to: YFTASGRGSLLWLKG*SKTTAASTLDEQLS
Trigger: CGACAACTGCTCGTCCAGCGTGCTGGCCGCCGTGGTCTTCGAGCACCCCTTCAACCACAGCAAGGAGCCCCTGCCGCTGGCGGTGAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 90 bp GACCCAGCTGGGAGGTCCCGGGAACTGAGAAGGGCACGACGGTTCTaGCGTACTCGCCCAAGGTCAGCCTCAGCATGGGGTCGTCGAAGA +
Preference number: 5 (lower is better)
Translates to: DPAGRSRELRRARRF*RTRPRSASAWGRRR
Trigger: TCTTCGACGACCCCATGCTGAGGCTGACCTTGGGCGAGTACGGCAGAACCGTCGTGCCCTTCTCAGTTCCCGGGACCTCCCAGCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 90 bp GTCACCGTCAGTCTCTGGAACAGCTGGCGTGTGGCGGCATCGGCATaGTACTCCATGATGGCCCGGTCCACAGCATGCTGCACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VTVSLWNSWRVAASA*YSMMARSTACCTAR
Trigger: CCTGGCCGTGCAGCATGCTGTGGACCGGGCCATCATGGAGTACCATGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACTGACGGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp GCGCGCCTCTCGTGCTGGTACTGCAGGGCAGGGAGCTGGATGGCCTaGATGTCCATACTGCTGTCCACCAGCTTCCCGACCCGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ARLSCWYCRAGSWMA*MSILLSTSFPTRRK
Trigger: CTTCCTTCGGGTCGGGAAGCTGGTGGACAGCAGTATGGACATCCAGGCCATCCAGCTCCCTGCCCTGCAGTACCAGCACGAGAGGCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS-3UTR CAA 90 bp ACAGCCACCCAGCCCTTAGGGTGGTCCCTGCGTGTCCTGGGGCGGGCGACTTCCTGTCCCTCGTACAGGTaGAGGTTCAGGTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: TATQPLGWSLRVLGRATSCPSYR*RFRSLT
Trigger: CGTCAGAGACCTGAACCTCAACCTGTACGAGGGACA...GGAAGTCGCCCGCCCCAGGACACGCAGGGACCACCCTAAGGGCTGGGTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCAGGGCGAGCCCAGTGTaGAGCTTGACAGCGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFRASPV*SLTAVR
Trigger: GCGCACCGCTGTCAAGCTCAACACTGGGCTCGCCCT...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGGTCTTCCCGGCTCCATaGAAGCCCAGCAGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQVFPAP*KPSRPK
Trigger: CTTCGGCCTGCTGGGCTTCAATGGAGCCGGGAAGAC...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp GCAGCATCCCCAGCACCTGCCCGAAGCAGAAGTCGTCGTCCACGTTaGCGGGACTCAGGAGGTCTCGCCACTGGATGCCCATGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: AASPAPARSRSRRPR*RDSGGLATGCPCLS
Trigger: CGAAAGGCATGGGCATCCAGTGGCGAGACCTCCTGAGTCCCGTCAACGTGGACGACGACTTCTGCTTCGGGCAGGTGCTGGGGATGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000563623.5
CDS TCA 90 bp GCAGCATCCCCAGCACCTGCCCGAAGCAGAAGTCGTCGTCCACGTTaGCGGGACTCAGGAGGTCTCGCCACTGGATGCCCATGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: AASPAPARSRSRRPR*RDSGGLATGCPCLC
Trigger: GCAAAGGCATGGGCATCCAGTGGCGAGACCTCCTGAGTCCCGTCAACGTGGACGACGACTTCTGCTTCGGGCAGGTGCTGGGGATGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382381.7
CDS GCA 90 bp AGGCAGGGAAGGCGATGGAGGAGGGGCAGTCTAGAGAGCCCCTGGTaGTGGTCCACTCGCTACAACTGCAGGCAGAGAGGAGTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RQGRRWRRGSLESPW*WSTRYNCRQRGVLP
Trigger: GGGAAGGACTCCTCTCTGCCTGCAGTTGTAGCGAGTGGACCAGCACCAGGGGCTCTCTAGACTGCCCCTCCTCCATCGCCTTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 90 bp CAGCAGCAGGGGCAGCTGGTACTGGATGGCCACGAGGAAGGGGTCTaGGATGAACGGCGGGTACGGGAACCTCTTGATGGTCACCGTCAG +
Preference number: 5 (lower is better)
Translates to: QQQGQLVLDGHEEGV*DERRVREPLDGHRQ
Trigger: CTGACGGTGACCATCAAGAGGTTCCCGTACCCGCCGTTCATCGCAGACCCCTTCCTCGTGGCCATCCAGTACCAGCTGCCCCTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 90 bp CGTTGGGCACGTGGTGGTGGACCAGCTGGGAGATGTCTTCCGGGTTaGAGTGCGGCTCCTTCACCAGCGTCATGTGATAGCCGGCACCGT +
Preference number: 5 (lower is better)
Translates to: RWARGGGPAGRCLPG*SAAPSPASCDSRHR
Trigger: ACGGTGCCGGCTATCACATGACGCTGGTGAAGGAGCCGCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp CAGGGAAGGCGATGGAGGAGGGGCAGTCTAGAGAGCCCCTGGTGCTaGTCCACTCGCTACAACTGCAGGCAGAGAGGAGTCCTTCCCGCT +
Preference number: 5 (lower is better)
Translates to: QGRRWRRGSLESPWC*STRYNCRQRGVLPA
Trigger: AGCGGGAAGGACTCCTCTCTGCCTGCAGTTGTAGCGAGTGGACCAGCACCAGGGGCTCTCTAGACTGCCCCTCCTCCATCGCCTTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CCA 90 bp CCGCTTGTTACCACCACTGTACGTCCTGACCAGCTTGTTGGCATGTaGCTCCAGCAGCAGGCCCCGCAGAGTGTTCTCCACGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: PLVTTTVRPDQLVGM*LQQQAPQSVLHAGP
Trigger: GGGGCCTGCGTGGAGAACACTCTGCGGGGCCTGCTGCTGGAGCCACATGCCAACAAGCTGGTCAGGACGTACAGTGGTGGTAACAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
CDS CCA 90 bp TTGAGACAGGAGACAGGAGCTGCCATGCGAGGATGGAGGCGGTGGTaGGGAGTAGGTGCAGCCAGGAGCTCAGGATGCCTGGAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LRQETGAAMRGWRRW*GVGAARSSGCLEPP
Trigger: TGGAGGCTCCAGGCATCCTGAGCTCCTGGCTGCACCTACTCCCCACCACCGCCTCCATCCTCGCATGGCAGCTCCTGTCTCCTGTCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS-3UTR CAA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGGCTCCTTGCTGTGGTaGAAGGGGTGCTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLGSLLW*KGCSKT
Trigger: GGTCTTCGAGCACCCCTTCAACCACAGCAAGGAGCC...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCACCTTGGACAGGTGCTaGATCTTGATCCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFTLDRC*ILIPAT
Trigger: GGTGGCGGGGATCAAGATCAAGCACCTGTCCAAGGT...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAATGGCCCCACAGAGGTaGCTGTCCACAGCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRMAPQR*LSTAQS
Trigger: CGACTGGGCTGTGGACAGCAACCTCTGTGGGGCCAT...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCAGCTTGAACAGAAGGTaGTCCACGACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFSLNRR*STTARA
Trigger: TGCCCTGGCCGTCGTGGACAACCTTCTGTTCAAGCT...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCGTCTTCCCGGCTCCATaGAAGCCCAGCAGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFVFPAP*KPSRPK
Trigger: CTTCGGCCTGCTGGGCTTCAATGGAGCCGGGAAGAC...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 90 bp AGGGGCAGTCTAGAGAGCCCCTGGTGCTGGTCCACTCGCTACAACTaGAGGCAGAGAGGAGTCCTTCCCGCTCAGCGTCCTTCATGTGCG +
Preference number: 5 (lower is better)
Translates to: RGSLESPWCWSTRYN*RQRGVLPAQRPSCA
Trigger: CGCACATGAAGGACGCTGAGCGGGAAGGACTCCTCTCTGCCTGCAGTTGTAGCGAGTGGACCAGCACCAGGGGCTCTCTAGACTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 90 bp AAACTGGCCACGTGGACTCCACTCACAAACTGCACATGCTTGGCCTaGACGGCCCTCTCGCTGACCGCCAGGATGGAGAACGTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: KLATWTPLTNCTCLA*TALSLTARMENVLA
Trigger: GGCCAGCACGTTCTCCATCCTGGCGGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAGTCCACGTGGCCAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 90 bp CGAGGCACCACAGCTCAGAGAGGGGCCAGGCACGTAACAATCCAATaGAGTCCCATGAGCGACATGGCAGACCCAGGGCAGCAACAGCCC +
Preference number: 5 (lower is better)
Translates to: RGTTAQRGARHVTIQ*SPMSDMADPGQQQP
Trigger: GGGCTGTTGCTGCCCTGGGTCTGCCATGTCGCTCATGGGACTGCATTGGATTGTTACGTGCCTGGCCCCTCTCTGAGCTGTGGTGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566200.1
ENST00000569062.1
CDS CCA 90 bp GGGTACGGGAACCTCTTGATGGTCACCGTCAGTCTCTGGAACAGCTaGCGTGTGGCGGCATCGGCATGGTACTCCATGATGGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: GYGNLLMVTVSLWNS*RVAASAWYSMMARS
Trigger: GGACCGGGCCATCATGGAGTACCATGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACTGACGGTGACCATCAAGAGGTTCCCGTACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp GATTTGAGACAGGAGACAGGAGCTGCCATGCGAGGATGGAGGCGGTaGTGGGGAGTAGGTGCAGCCAGGAGCTCAGGATGCCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: DLRQETGAAMRGWRR*WGVGAARSSGCLEP
Trigger: AGGCTCCAGGCATCCTGAGCTCCTGGCTGCACCTACTCCCCACCACCGCCTCCATCCTCGCATGGCAGCTCCTGTCTCCTGTCTCAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS-3UTR CAA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTGTCTTCCCGGCACCGTaGTGGCCCAGCAGGACGGTG +
Preference number: 5 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAVFPAP*WPSRTV
Trigger: CACCGTCCTGCTGGGCCACAACGGTGCCGGGAAGAC...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTCACTGCAGCTCCCCCTaGGCCATGATGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTHCSSP*AMMAMR
Trigger: CCGCATCGCCATCATGGCCAAGGGGGAGCTGCAGTG...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AAGGAGCAGAGCCTCCAGGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCGCTGCTCGTACACCTaGGAGAGCTCCTTGATAATC +
Preference number: 5 (lower is better)
Translates to: KEQSLQDAPGLRWTLRPQRCSYT*ESSLII
Trigger: GATTATCAAGGAGCTCTCCAAGGTGTACGAGCAGCG...CTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCCTGGAGGCTCTGCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp AAGGGATGTAGGCAAGCTCCCAGGTGTCTCCTGGCGGAGGGAAGGTaGAGAACAGAGGCAGCTCCTGGATGGACTGGCCCGGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: KGCRQAPRCLLAEGR*RTEAAPGWTGPGRW
Trigger: CCATCTACCCGGGCCAGTCCATCCAGGAGCTGCCTCTGTTCTTCACCTTCCCTCCGCCAGGAGACACCTGGGAGCTTGCCTACATCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS TCA 90 bp GGAAGTTGGAGACCACAATGGAGGCGTGAGGCCCGCACAGCAGCTTaGACAGAAGGTTGTCCACGACGGCCAGGGCAGTGGCTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: GSWRPQWRREARTAA*TEGCPRRPGQWLES
Trigger: ACTCTCCAGCCACTGCCCTGGCCGTCGTGGACAACCTTCTGTTCAAGCTGCTGTGCGGGCCTCACGCCTCCATTGTGGTCTCCAACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp CTCCACTCACAAACTGCACATGCTTGGCCTGCACGGCCCTCTCGCTaGCCGCCAGGATGGAGAACGTGCTGGCCAAGAATGCCATGGCGA +
Preference number: 5 (lower is better)
Translates to: LHSQTAHAWPARPSR*PPGWRTCWPRMPWR
Trigger: TCGCCATGGCATTCTTGGCCAGCACGTTCTCCATCCTGGCGGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 90 bp GGCCCTCTCGCTGACCGCCAGGATGGAGAACGTGCTGGCCAAGAATaGCATGGCGAAGAGCAGGTTGAGGGCAATGTCGAATCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: GPLADRQDGERAGQE*HGEEQVEGNVESLP
Trigger: CGGAAGGGATTCGACATTGCCCTCAACCTGCTCTTCGCCATGGCATTCTTGGCCAGCACGTTCTCCATCCTGGCGGTCAGCGAGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 90 bp AGAAATTCCAGTTGCTCCATTCAAACGCTTCTCCCTGCCGACCCATaGGGTGTGAGCCGCTGCCCGCCCTCTGCCCGGTGTGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: RNSSCSIQTLLPADP*GVSRCPPSARCADS
Trigger: AGAGTCAGCACACCGGGCAGAGGGCGGGCAGCGGCTCACACCGCATGGGTCGGCAGGGAGAAGCGTTTGAATGGAGCAACTGGAATTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS GCA 90 bp GTAGAGCATGAGAAATTCCAGTTGCTCCATTCAAACGCTTCTCCCTaGCGACCCATGCGGTGTGAGCCGCTGCCCGCCCTCTGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: VEHEKFQLLHSNASP*RPMRCEPLPALCPV
Trigger: CACCGGGCAGAGGGCGGGCAGCGGCTCACACCGCATGGGTCGGCAGGGAGAAGCGTTTGAATGGAGCAACTGGAATTTCTCATGCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 90 bp GCAGAAGGAGATTTGAGACAGGAGACAGGAGCTGCCATGCGAGGATaGAGGCGGTGGTGGGGAGTAGGTGCAGCCAGGAGCTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: AEGDLRQETGAAMRG*RRWWGVGAARSSGC
Trigger: GCATCCTGAGCTCCTGGCTGCACCTACTCCCCACCACCGCCTCCATCCTCGCATGGCAGCTCCTGTCTCCTGTCTCAAATCTCCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS-3UTR CAA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGCCGCGCACTCGCATGTaGATCACAAGTGCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: DPGHEGWAALVHSVHTALPRTRM*ITSALR
Trigger: GCGCAGGGCACTTGTGATCAACATGCGAGTGCGCGG...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCACTGCAGCTCCCCCTaGGCCATGATGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: RVCRHGDAHADPGHEGWAHCSSP*AMMAMR
Trigger: CCGCATCGCCATCATGGCCAAGGGGGAGCTGCAGTG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGCTCTCCAGCGTGGCGTaGGGCACGTGGTGGTGGACC +
Preference number: 5 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLLSSVA*GTWWWT
Trigger: GGTCCACCACCACGTGCCCAACGCCACGCTGGAGAG...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTTACGTCCTGACCAGCTaGTTGGCATGTGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LETETASSLATFPPVPAAYVLTS*LACGSS
Trigger: GCTGGAGCCACATGCCAACAAGCTGGTCAGGACGTA...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 90 bp GCTCTGAAAACTGAGTGTAAAGAGGGCGAGGTGTGCAGACGTGGCTaGTCTGTCCTGGAGAGGCAGGGAAGGCGATGGAGGAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: ALKTECKEGEVCRRG*SVLERQGRRWRRGS
Trigger: ACTGCCCCTCCTCCATCGCCTTCCCTGCCTCTCCAGGACAGAGCAGCCACGTCTGCACACCTCGCCCTCTTTACACTCAGTTTTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 90 bp CACCAGGACCTGTGCCGCCACCATTTTCCACTCGCGCCAGCTGTATaGGGCCTTCTTCAGGAACATGGCCCAGAATTGCTGGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HQDLCRHHFPLAPAV*GLLQEHGPELLAVQ
Trigger: CTGCACTGCCAGCAATTCTGGGCCATGTTCCTGAAGAAGGCCGCATACAGCTGGCGCGAGTGGAAAATGGTGGCGGCACAGGTCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 90 bp TCCGGACTGGGGGCCAGGATGCGGGTCCTCTCGTCCGCTACATCTTaGTCCTCAGGAAGCACAGGCATCCGGGTGTATAATTCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: SGLGARMRVLSSATS*SSGSTGIRVYNSVS
Trigger: GGACACTGAATTATACACCCGGATGCCTGTGCTTCCTGAGGACCAAGATGTAGCGGACGAGAGGACCCGCATCCTGGCCCCCAGTCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS-3UTR CAA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGGGCTCCTTGCTGTGGTaGAAGGGGTGCTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLGSLLW*KGCSKT
Trigger: GGTCTTCGAGCACCCCTTCAACCACAGCAAGGAGCC...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGTCCCTGCAACCGCCCTaGGCTTCCCACACCAATAGG +
Preference number: 5 (lower is better)
Translates to: DPGHEGWAALVHSVHTALSLQPP*ASHTNR
Trigger: CCTATTGGTGTGGGAAGCCAAGGGCGGTTGCAGGGA...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGGTGCTTGATCTaGATCCCCGCCACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTDRCLI*IPATRS
Trigger: GGACCTGGTGGCGGGGATCAAGATCAAGCACCTGTC...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCTGTCCCTCGTACAGGTaGAGGTTCAGGTCTCTGACG +
Preference number: 5 (lower is better)
Translates to: PGLRWTLRPQHLITVSSFCPSYR*RFRSLT
Trigger: CGTCAGAGACCTGAACCTCAACCTGTACGAGGGACA...GAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCGTCTTCCCGGCACCGTaGTGGCCCAGCAGGACGGTG +
Preference number: 5 (lower is better)
Translates to: PQGRLVSCVNLDKSLGPLVFPAP*WPSRTV
Trigger: CACCGTCCTGCTGGGCCACAACGGTGCCGGGAAGAC...GAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGGAGATGTCTTCCGGGTaGCAGTGCGGCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLEMSSG*QCGSFT
Trigger: GGTGAAGGAGCCGCACTGCAACCCGGAAGACATCTC...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCACTGACAGTGATCTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACATGGTACGCCTGGTTGTaGAACAAGGCGTTGACGACC +
Preference number: 5 (lower is better)
Translates to: PLTVICMVHSWRPGGLATWYAWL*NKALTT
Trigger: GGTCGTCAACGCCTTGTTCAACAACCAGGCGTACCA...TGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAGATCACTGTCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGGAGTGGTACGCCTGGTaGTTGAACAAGGCGTTGACG +
Preference number: 5 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMEWYAW*LNKALT
Trigger: CGTCAACGCCTTGTTCAACAACCAGGCGTACCACTC...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTTCGTTAAACTGGTCCTaGGCAGCCTGCAGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTSLNWS*AACRAL
Trigger: GAGCGCCCTGCAGGCTGCCAAGGACCAGTTTAACGA...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGAATGGCGAAGAGCAGGTaGAGGGCAATGTCGAATCCC +
Preference number: 5 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRMAKSR*RAMSNP
Trigger: GGGATTCGACATTGCCCTCAACCTGCTCTTCGCCAT...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGACAAACTGCACATGCTaGGCCTGCACGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: DPGHEGWAALVHSVHTALTNCTC*ACTALS
Trigger: CGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGT...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp TTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCACCTTGGAGAGCTCCTaGATAATCAGAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: FLAAWGPRYSSTWLASRFTLESS*IIRGVW
Trigger: CCACACACCTCTGATTATCAAGGAGCTCTCCAAGGT...GAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp ATGAAGTGGGTGGTCAGCACGATGGTGCGGTCACTTTTCTGCCGCTaGAGAAGATCCCAGATGGCCCTCCTGGAGATGGCGTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: MKWVVSTMVRSLFCR*RRSQMALLEMASMP
Trigger: GGGCATGGACGCCATCTCCAGGAGGGCCATCTGGGATCTTCTTCAGCGGCAGAAAAGTGACCGCACCATCGTGCTGACCACCCACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS TCA 90 bp AGCTGGGATGCGCATGATGGTGACCATCAGGAAGGTGGCGATGCCTaGCAGGATGTTGAAGATGGTCAGCCTCGTGTAGGCAGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: SWDAHDGDHQEGGDA*QDVEDGQPRVGSGR
Trigger: GCGGCCACTGCCTACACGAGGCTGACCATCTTCAACATCCTGTCAGGCATCGCCACCTTCCTGATGGTCACCATCATGCGCATCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 90 bp AGCGTCACTGTGAGAAGGGATGTAGGCAAGCTCCCAGGTGTCTCCTaGCGGAGGGAAGGTGAAGAACAGAGGCAGCTCCTGGATGGACTG +
Preference number: 5 (lower is better)
Translates to: SVTVRRDVGKLPGVS*RREGEEQRQLLDGL
Trigger: CAGTCCATCCAGGAGCTGCCTCTGTTCTTCACCTTCCCTCCGCCAGGAGACACCTGGGAGCTTGCCTACATCCCTTCTCACAGTGACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CCA 90 bp ATGAACGGCGGGTACGGGAACCTCTTGATGGTCACCGTCAGTCTCTaGAACAGCTGGCGTGTGGCGGCATCGGCATGGTACTCCATGATG +
Preference number: 5 (lower is better)
Translates to: MNGGYGNLLMVTVSL*NSWRVAASAWYSMM
Trigger: CATCATGGAGTACCATGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACTGACGGTGACCATCAAGAGGTTCCCGTACCCGCCGTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp TCCGGACTGGGGGCCAGGATGCGGGTCCTCTCGTCCGCTACATCTTaGTCCTCAGGAAGCACAGGCATCCGGGTGTATAATTCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: SGLGARMRVLSSATS*SSGSTGIRVYNSVS
Trigger: ACTGACAGAATTATACACCCGGATGCCTGTGCTTCCTGAGGACCAAGATGTAGCGGACGAGAGGACCCGCATCCTGGCCCCCAGTCCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
CDS-3UTR CAA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGGAGTTTCAGGTTCAGTaGCTCAGCTCCACACTCATG +
Preference number: 5 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLEFQVQ*LSSTLM
Trigger: CATGAGTGTGGAGCTGAGCAACTGAACCTGAAACTC...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCCCGCGCACTCGCATGTaGATCACAAGTGCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGPRTRM*ITSALR
Trigger: GCGCAGGGCACTTGTGATCAACATGCGAGTGCGCGG...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTGCATGGTCCATTCCTGGCGGCCTGGGGGCCTCGCTACAGTTCAACCTGGCTGACATTTGGCTTCACCTaGACACAGAAGAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LHGPFLAAWGPRYSSTWLTFGFT*TQKSRV
Trigger: GACCCTGCTCTTCTGTGTCAAGGTGAAGCCAAATGT...CAGCCAGGTTGAACTGTAGCGAGGCCCCCAGGCCGCCAGGAATGGACCATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTATCCCTGCAACCGCCCTaGGCTTCCCACACCAATAGG +
Preference number: 5 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVSLQPP*ASHTNR
Trigger: CCTATTGGTGTGGGAAGCCAAGGGCGGTTGCAGGGA...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGAGCTTGAACAGAAGGTaGTCCACGACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLSLNRR*STTARA
Trigger: TGCCCTGGCCGTCGTGGACAACCTTCTGTTCAAGCT...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTATCGTTAAACTGGTCCTaGGCAGCCTGCAGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVSLNWS*AACRAL
Trigger: GAGCGCCCTGCAGGCTGCCAAGGACCAGTTTAACGA...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCTGGGGCGGGCGACTTCCTGAGGGTGCAGTGCTGGAAACAGAGACTGCTTCGACGCTGCTCGTACACCTaGGAGAGCTCCTTGATAATC +
Preference number: 5 (lower is better)
Translates to: PGAGDFLRVQCWKQRLLRRCSYT*ESSLII
Trigger: GATTATCAAGGAGCTCTCCAAGGTGTACGAGCAGCG...TCGAAGCAGTCTCTGTTTCCAGCACTGCACCCTCAGGAAGTCGCCCGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTTACGTCCTGACCAGCTaGTTGGCATGTGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTYVLTS*LACGSS
Trigger: GCTGGAGCCACATGCCAACAAGCTGGTCAGGACGTA...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 90 bp CGCCACCAGGTCCTCTGGCTCGGCTTCAAAGTACTCGTTTCTGAGTaGTTTCTCGGGGTCACTGTCTTCTTCCTCCTTCCCTGCAACCGC +
Preference number: 5 (lower is better)
Translates to: RHQVLWLGFKVLVSE*FLGVTVFFLLPCNR
Trigger: GCGGTTGCAGGGAAGGAGGAAGAAGACAGTGACCCCGAGAAAGCACTCAGAAACGAGTACTTTGAAGCCGAGCCAGAGGACCTGGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp CGCCACTGGATGCCCATGCCTTTCGCCTCAAATTTCCCAATGAGCTaGGCTCCCATTGCCATGGCGACATTAGACAGGAGGCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RHWMPMPFASNFPMS*APIAMATLDRRQEQ
Trigger: CTGCTCCTGCCTCCTGTCTAATGTCGCCATGGCAATGGGAGCCCAGCTCATTGGGAAATTTGAGGCGAAAGGCATGGGCATCCAGTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000563623.5
CDS-3UTR CAA 90 bp CTGGAAACAGAGACTGCTTCGAGCCTGGCCACCTTCCCTCCTGTGCCGGCTGCTGAGTTTCAGGTTCAGTaGCTCAGCTCCACACTCATG +
Preference number: 5 (lower is better)
Translates to: LETETASSLATFPPVPAAEFQVQ*LSSTLM
Trigger: CATGAGTGTGGAGCTGAGCAACTGAACCTGAAACTC...AGCAGCCGGCACAGGAGGGAAGGTGGCCAGGCTCGAAGCAGTCTCTGTTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGAGCACAGCCATCGTCTaGCTGAAAGGGACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLSTAIV*LKGTPS
Trigger: ACTGGGCGTCCCTTTCAGCAAGACGATGGCTGTGCT...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GATCCTGGGCATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGGCTGCCATGTTGGCTTaGCTGAAGAAGGTGCTGACC +
Preference number: 5 (lower is better)
Translates to: DPGHEGWAALVHSVHTALAAMLA*LKKVLT
Trigger: GGTCAGCACCTTCTTCAGCAAAGCCAACATGGCAGC...CAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATGCCCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR CAA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCTCAGAGTCATCCAGTaGTACCGAGGGGCCACGAAG +
Preference number: 5 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLLRVIQ*YRGATK
Trigger: CTTCGTGGCCCCTCGGTACAACTGGATGACTCTGAG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301732.10
CDS-3UTR CAA 90 bp TTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAAGTCGTCGTCCACGTaGACGGGACTCAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: FNLAGFPLPPQGRLVSCVKSSST*TGLRRS
Trigger: AGACCTCCTGAGTCCCGTCAACGTGGACGACGACTT...TACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCGACAGGTGCTTGATCTaGATCCCCGCCACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGDRCLI*IPATRS
Trigger: GGACCTGGTGGCGGGGATCAAGATCAAGCACCTGTC...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCTGCTTCTAGGAGATGCTGTGGGACGGTGCCCGGCTTCGCGGTGACTACCATGTCTGCGACTGTCAAGTaGTCAAACAGGATGTCGTGC +
Preference number: 5 (lower is better)
Translates to: AASRRCCGTVPGFAVTTMSATVK*SNRMSC
Trigger: GCACGACATCCTGTTTGACAACTTGACAGTCGCAGA...CATGGTAGTCACCGCGAAGCCGGGCACCGTCCCACAGCATCTCCTAGAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCAGCCCAGTGTTGAGCTaGACAGCGGTGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRPQHLITVSSFPPLTVISPVLS*TAVRSS
Trigger: GGAGGAGCGCACCGCTGTCAAGCTCAACACTGGGCT...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCAGGGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCAGGGCGAGCCCAGTGTaGAGCTTGACAGCGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PGEISVVCKLGQVTGSSLRASPV*SLTAVR
Trigger: GCGCACCGCTGTCAAGCTCAACACTGGGCTCGCCCT...GAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTATGGCGAAGAGCAGGTaGAGGGCAATGTCGAATCCC +
Preference number: 5 (lower is better)
Translates to: ALDAKTPAPNHSQQLPSTMAKSR*RAMSNP
Trigger: GGGATTCGACATTGCCCTCAACCTGCTCTTCGCCAT...AGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTCTCGTCCGCTACATCTaGGTCCTCAGGAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: RVCRHGDAHADPGHEGWALVRYI*VLRKHR
Trigger: CCTGTGCTTCCTGAGGACCAAGATGTAGCGGACGAG...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGGTCCTGACCAGCTTGTaGGCATGTGGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLVLTSL*ACGSSS
Trigger: GCTGCTGGAGCCACATGCCAACAAGCTGGTCAGGAC...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp TCCCCGCCACCAGGTCCTCTGGCTCGGCTTCAAAGTACTCGTTTCTaGGTGCTTTCTCGGGGTCACTGTCTTCTTCCTCCTTCCCTGCAA +
Preference number: 5 (lower is better)
Translates to: SPPPGPLARLQSTRF*VLSRGHCLLPPSLQ
Trigger: TTGCAGGGAAGGAGGAAGAAGACAGTGACCCCGAGAAAGCACTCAGAAACGAGTACTTTGAAGCCGAGCCAGAGGACCTGGTGGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp CACCTTGGACAGGTGCTTGATCTTGATCCCCGCCACCAGGTCCTCTaGCTCGGCTTCAAAGTACTCGTTTCTGAGTGCTTTCTCGGGGTC +
Preference number: 5 (lower is better)
Translates to: HLGQVLDLDPRHQVL*LGFKVLVSECFLGV
Trigger: GACCCCGAGAAAGCACTCAGAAACGAGTACTTTGAAGCCGAGCCAGAGGACCTGGTGGCGGGGATCAAGATCAAGCACCTGTCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS-3UTR CAA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCAGCACAGCCATCGTCTaGCTGAAAGGGACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGSTAIV*LKGTPS
Trigger: ACTGGGCGTCCCTTTCAGCAAGACGATGGCTGTGCT...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAAGCGGCAGGGGCTCCTaGCTGTGGTTGAAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: EISVVCKLGQVTGSSLQGSGRGS*LWLKGC
Trigger: GCACCCCTTCAACCACAGCAAGGAGCCCCTGCCGCT...TCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGCCCACCCTGAACACCTaGGACAGGTGCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLPTLNT*DRCLIL
Trigger: CAAGATCAAGCACCTGTCCAAGGTGTTCAGGGTGGG...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAGAACATGGCCCAGAATaGCTGGCAGTGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPEHGPE*LAVQGE
Trigger: CTCGCCCTGCACTGCCAGCAATTCTGGGCCATGTTC...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCGAACATGGCCCAGAATaGCTGGCAGTGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIEHGPE*LAVQGE
Trigger: CTCGCCCTGCACTGCCAGCAATTCTGGGCCATGTTC...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGTGGTACGCCTGGTTGTaGAACAAGGCGTTGACGACC +
Preference number: 5 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLWYAWL*NKALTT
Trigger: GGTCGTCAACGCCTTGTTCAACAACCAGGCGTACCA...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAGGCCCGCACAGCAGCTaGAACAGAAGGTTGTCCACG +
Preference number: 5 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPGPHSS*NRRLST
Trigger: CGTGGACAACCTTCTGTTCAAGCTGCTGTGCGGGCC...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTGTCCTGACCAGCTTGTaGGCATGTGGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGVLTSL*ACGSSS
Trigger: GCTGCTGGAGCCACATGCCAACAAGCTGGTCAGGAC...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 90 bp TTTCTCGGGGTCACTGTCTTCTTCCTCCTTCCCTGCAACCGCCCTTaGCTTCCCACACCAATAGGAGGGCATGATGAAGAAGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: FLGVTVFFLLPCNRP*LPTPIGGHDEEVPG
Trigger: CCCTGGTACTTCTTCATCATGCCCTCCTATTGGTGTGGGAAGCCAAGGGCGGTTGCAGGGAAGGAGGAAGAAGACAGTGACCCCGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS-3UTR CAA 90 bp TGGGGCTGCCCCCATATGACTGTCACTAGTCAACAGCCCGGGCTGGTAACACGATGCGGAAAAGCCTCCTaGACTCACAGTGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: WGCPHMTVTSQQPGLVTRCGKAS*THSGRV
Trigger: AACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCA...TCGTGTTACCAGCCCGGGCTGTTGACTAGTGACAGTCATATGGGGGCAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp GGATGCCCCCGGGCTGCGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGGAAAAAGGAGCCTGTTaGGGTCCACATGTAATTTCT +
Preference number: 5 (lower is better)
Translates to: GCPRAALDAKTPAPNHSQEKGAC*GPHVIS
Trigger: AGAAATTACATGTGGACCCAAACAGGCTCCTTTTTC...CTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCGCAGCCCGGGGGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp ACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGGTACGGGAACCTCTaGATGGTCACCGTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: TPAPNHSQQLPSTDSDLHGYGNL*MVTVSL
Trigger: GAGACTGACGGTGACCATCAAGAGGTTCCCGTACCC...ATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CGCTGGACGCTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACATTTGGCTTCACCTaGACACAGAAGAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RWTLRPQHLITVSSFPPLTFGFT*TQKSRV
Trigger: GACCCTGCTCTTCTGTGTCAAGGTGAAGCCAAATGT...CAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAGCGTCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCAAGTCGTCGTCCACGTaGACGGGACTCAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIKSSST*TGLRRS
Trigger: AGACCTCCTGAGTCCCGTCAACGTGGACGACGACTT...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCACCTTGGACAGGTGCTaGATCTTGATCCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: LRPQHLITVSSFPPLTVITLDRC*ILIPAT
Trigger: GGTGGCGGGGATCAAGATCAAGCACCTGTCCAAGGT...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCGCACCGTATTTCTGCTaGAGGAACAGCGAGGACCCG +
Preference number: 5 (lower is better)
Translates to: LRPQHLITVSSFPPLTVIAPYFC*RNSEDP
Trigger: CGGGTCCTCGCTGTTCCTCAAGCAGAAATACGGTGC...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGATGTCTTCCGGGTaGCAGTGCGGCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSREMSSG*QCGSFT
Trigger: GGTGAAGGAGCCGCACTGCAACCCGGAAGACATCTC...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAAGCCCAGTGTTGAGCTaGACAGCGGTGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HEGWAALVHSVHTALNFSSPVLS*TAVRSS
Trigger: GGAGGAGCGCACCGCTGTCAAGCTCAACACTGGGCT...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTTGTTGAACAAGGCGTaGACGACCGTGCGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LRPQHLITVSSFPPLTVILLNKA*TTVRSP
Trigger: GGGAGAGCGCACGGTCGTCAACGCCTTGTTCAACAA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCGAGTGGTACGCCTGGTaGTTGAACAAGGCGTTGACG +
Preference number: 5 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGEWYAW*LNKALT
Trigger: CGTCAACGCCTTGTTCAACAACCAGGCGTACCACTC...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTAGTGTCGTGTGTAAACTTGATGCCTGACAGGATGTaGAAGATGGTCAGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: LAGFPLPPQGRLVSCVNLMPDRM*KMVSLV
Trigger: CACGAGGCTGACCATCTTCAACATCCTGTCAGGCAT...CAAGTTTACACACGACACTAATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGAGTGCCTGTGGATGCCCATGCCTTaGCTGAAGAAGGTGCTGACC +
Preference number: 5 (lower is better)
Translates to: VSCVNLDKSLGPLSRECLWMPMP*LKKVLT
Trigger: GGTCAGCACCTTCTTCAGCAAAGGCATGGGCATCCA...CAGGCACTCCCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382381.7
CDS TCA 90 bp GGAGTCCTTCCCGCTCAGCGTCCTTCATGTGCGGAAAAGCCTCCTTaGCTCACAGTGGAAGAGTTTCAGGTTCAGTTGCTCAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: GVLPAQRPSCAEKPP*LTVEEFQVQLLSST
Trigger: TGTGGAGCTGAGCAACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGAGCGGGAAGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 90 bp CAACTGCAGGCAGAGAGGAGTCCTTCCCGCTCAGCGTCCTTCATGTaGGGAAAAGCCTCCTTGACTCACAGTGGAAGAGTTTCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: QLQAERSPSRSASFM*GKASLTHSGRVSGS
Trigger: TGAACCTGAAACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGAGCGGGAAGGACTCCTCTCTGCCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 90 bp GTTTCTGAGTGCTTTCTCGGGGTCACTGTCTTCTTCCTCCTTCCCTaGAACCGCCCTTGGCTTCCCACACCAATAGGAGGGCATGATGAA +
Preference number: 5 (lower is better)
Translates to: VSECFLGVTVFFLLP*NRPWLPTPIGGHDE
Trigger: TTCATCATGCCCTCCTATTGGTGTGGGAAGCCAAGGGCGGTTGCAGGGAAGGAGGAAGAAGACAGTGACCCCGAGAAAGCACTCAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 90 bp CCGCTCAGCGTCCTTCATGTGCGGAAAAGCCTCCTTGACTCACAGTaGAAGAGTTTCAGGTTCAGTTGCTCAGCTCCACACTCATGGCTG +
Preference number: 5 (lower is better)
Translates to: PLSVLHVRKSLLDSQ*KSFRFSCSAPHSWL
Trigger: CAGCCATGAGTGTGGAGCTGAGCAACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS-3UTR CAA 90 bp GGCCTGCCCCAGCTCTGGGAAAGTGAACTCCAGAGTATGCAGACATGGAGATGCTGCGGAAAAGCCTCCTaGACTCACAGTGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: GLPQLWESELQSMQTWRCCGKAS*THSGRV
Trigger: AACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCA...GCATCTCCATGTCTGCATACTCTGGAGTTCACTTTCCCAGAGCTGGGGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GGCCTCGCTACAGTTCAACCTGGCTGGCTTCCCGCTTCCTCCCCAGGGGAGATTGAAAAAGGAGCCTGTTaGGGTCCACATGTAATTTCT +
Preference number: 5 (lower is better)
Translates to: GLATVQPGWLPASSPGEIEKGAC*GPHVIS
Trigger: AGAAATTACATGTGGACCCAAACAGGCTCCTTTTTC...AATCTCCCCTGGGGAGGAAGCGGGAAGCCAGCCAGGTTGAACTGTAGCGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCCACCCTGAACACCTaGGACAGGTGCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: PAPNHSQQLPSTDSDLHGPTLNT*DRCLIL
Trigger: CAAGATCAAGCACCTGTCCAAGGTGTTCAGGGTGGG...ACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCTGGGCTTCTGCGACTGTCAAGTaGTCAAACAGGATGTCGTGC +
Preference number: 5 (lower is better)
Translates to: RVCRHGDAHADPGHEGWASATVK*SNRMSC
Trigger: GCACGACATCCTGTTTGACAACTTGACAGTCGCAGA...AGCCCAGCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp AACTCCAGAGTATGCAGACATGGAGATGCGCATGCTGATCCTGGGCATGAGGGCATGCCTGACAGGATGTaGAAGATGGTCAGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: NSRVCRHGDAHADPGHEGMPDRM*KMVSLV
Trigger: CACGAGGCTGACCATCTTCAACATCCTGTCAGGCAT...GCCCTCATGCCCAGGATCAGCATGCGCATCTCCATGTCTGCATACTCTGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGCTCGTCCGCTACATCTaGGTCCTCAGGAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRLVRYI*VLRKHR
Trigger: CCTGTGCTTCCTGAGGACCAAGATGTAGCGGACGAG...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CTAAGACCCCAGCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTCCCCGGTCAGCATTTaGAAAGTCGTGGTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LRPQHLITVSSFPPLTVISPVSI*KVVVFP
Trigger: CGGGAAGACCACGACTTTCAAAATGCTGACCGGGGA...GATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGCTGGGGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 90 bp TGGCGTTGGGCACATTTTCCGACTGAATCTTCAAGCGGAGCCAGATaGGGATCCCAGAAAACAGCAATGGCAGGAAGAGTTCCAGGACCG +
Preference number: 5 (lower is better)
Translates to: WRWAHFPTESSSGAR*GSQKTAMAGRVPGP
Trigger: CGGTCCTGGAACTCTTCCTGCCATTGCTGTTTTCTGGGATCCTCATCTGGCTCCGCTTGAAGATTCAGTCGGAAAATGTGCCCAACGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS-3UTR CAA 90 bp CATGAGGGCTGGGCTGCACTCGTCCATTCTGTGCATACTGCCTTGAATTTTTCAGGGTACGGGAACCTCTaGATGGTCACCGTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: HEGWAALVHSVHTALNFSGYGNL*MVTVSL
Trigger: GAGACTGACGGTGACCATCAAGAGGTTCCCGTACCC...TGAAAAATTCAAGGCAGTATGCACAGAATGGACGAGTGCAGCCCAGCCCTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp CACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCATTCCCCGGTCAGCATTTaGAAAGTCGTGGTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: HLITVSSFPPLTVICMVHSPVSI*KVVVFP
Trigger: CGGGAAGACCACGACTTTCAAAATGCTGACCGGGGA...ATGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAGTATTCAATGTGTCCTaGAGACAGCCACCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPVFNVS*RQPPSP
Trigger: AGGGCTGGGTGGCTGTCTCAAGGACACATTGAATAC...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCCCGCGCACTCGCATGTaGATCACAAGTGCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: VYCGTIHNSKDLEPSQMSPRTRM*ITSALR
Trigger: GCGCAGGGCACTTGTGATCAACATGCGAGTGCGCGG...GGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTAGCGGCAGGGGCTCCTaGCTGTGGTTGAAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPSGRGS*LWLKGC
Trigger: GCACCCCTTCAACCACAGCAAGGAGCCCCTGCCGCT...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp GCACCTAATCACAGTCAGCAGCTTCCCTCCACTGACAGTGATCTGCATGGTCCAACCTTGGAGAGCTCCTaGATAATCAGAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: APNHSQQLPSTDSDLHGPTLESS*IIRGVW
Trigger: CCACACACCTCTGATTATCAAGGAGCTCTCCAAGGT...TGGACCATGCAGATCACTGTCAGTGGAGGGAAGCTGCTGACTGTGATTAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp GGGAGATTAGTGTCGTGTGTAAACTTGGACAAGTCACTGGGTCCTCTCTCCAGGGTATTCAATGTGTCCTaGAGACAGCCACCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GRLVSCVNLDKSLGPLSRVFNVS*RQPPSP
Trigger: AGGGCTGGGTGGCTGTCTCAAGGACACATTGAATAC...CCTGGAGAGAGGACCCAGTGACTTGTCCAAGTTTACACACGACACTAATCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS-3UTR CAA 90 bp ATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAGGCTCCTTGCTGTGGTaGAAGGGGTGCTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: IAALFTTAKTWNQAKCPEGSLLW*KGCSKT
Trigger: GGTCTTCGAGCACCCCTTCAACCACAGCAAGGAGCC...TTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp ATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTAGCACAGCCATCGTCTaGCTGAAAGGGACGCCCAGT +
Preference number: 5 (lower is better)
Translates to: MFIAALFTTAKTWNQAKCSTAIV*LKGTPS
Trigger: ACTGGGCGTCCCTTTCAGCAAGACGATGGCTGTGCT...ACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp TTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAGTTTCAGGTTCAGTaGCTCAGCTCCACACTCATG +
Preference number: 5 (lower is better)
Translates to: FIAALFTTAKTWNQAKCPEFQVQ*LSSTLM
Trigger: CATGAGTGTGGAGCTGAGCAACTGAACCTGAAACTC...AGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp ATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAACACAACAGCAAAGACTaGGAACCAAGCCAAATGTCC +
Preference number: 5 (lower is better)
Translates to: IAALFTTAKTWNQAKCPEHNSKD*EPSQMS
Trigger: GGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTG...TTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp ATGTTTATTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCTTCAAGAAATACTTTaGCAAAGTGGGGCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: MFIAALFTTAKTWNQAKCLQEIL*QSGAAP
Trigger: GGGGGCAGCCCCACTTTGCAAAAGTATTTCTTGAAG...ACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAATAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS-3UTR CAA 90 bp TTGCGGCACTATTCACAACAGCAAAGACTTGGAACCAAGCCAAATGTCCTGAAAGAAAAAGGAGCCTGTTaGGGTCCACATGTAATTTCT +
Preference number: 5 (lower is better)
Translates to: LRHYSQQQRLGTKPNVLKEKGAC*GPHVIS
Trigger: AGAAATTACATGTGGACCCAAACAGGCTCCTTTTTC...TTTCAGGACATTTGGCTTGGTTCCAAGTCTTTGCTGTTGTGAATAGTGCCGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567910.1
CDS CCA 90 bp AGGGTCTTTGAATATGTGATTAGTAAGGATCTTAAGGTGAGACACTaGATTAGTGTGGGCCTTAAACCCAACAGCAAGTGTCCTTATAAG +
Preference number: 5 (lower is better)
Translates to: RVFEYVISKDLKVRH*ISVGLKPNSKCPYK
Trigger: CTTATAAGGACACTTGCTGTTGGGTTTAAGGCCCACACTAATCCAGTGTCTCACCTTAAGATCCTTACTAATCACATATTCAAAGACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS GCA 72 bp CCGCTCCAGCCTCGCAGTGGCGGCGGCACTGACAGCTaGGTGGCCGCCCTGGAGGGGAGGGTGCGCCTGCAA +
Preference number: 6 (lower is better)
Translates to: PLQPRSGGGTDS*VAALEGRVRLQ
Trigger: TTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGCGAGGCTGGAGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 72 bp TCCAGCCTCGCAGTGGCGGCGGCACTGACAGCTGCGTaGCCGCCCTGGAGGGGAGGGTGCGCCTGCAACCCG +
Preference number: 6 (lower is better)
Translates to: SSLAVAAALTAA*PPWRGGCACNP
Trigger: CGGGTTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGCGAGGCTGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 72 bp GCAGTGGCGGCGGCACTGACAGCTGCGTGGCCGCCCTaGAGGGGAGGGTGCGCCTGCAACCCGCTACTGGCG +
Preference number: 6 (lower is better)
Translates to: AVAAALTAAWPP*RGGCACNPLLA
Trigger: CGCCAGTAGCGGGTTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382381.7
CDS TCA 72 bp CGGTGTGAGCCGCTGCCCGCCCTCTGCCCGGTGTGCTaGCTCTCCCGGACCCTGTTTGCGCCCTCGCAGACT +
Preference number: 6 (lower is better)
Translates to: RCEPLPALCPVC*LSRTLFAPSQT
Trigger: AGTCTGCGAGGGCGCAAACAGGGTCCGGGAGAGTCAGCACACCGGGCAGAGGGCGGGCAGCGGCTCACACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS GCA 72 bp ACGCTTCTCCCTGCCGACCCATGCGGTGTGAGCCGCTaGCCGCCCTCTGCCCGGTGTGCTGACTCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: TLLPADPCGVSR*PPSARCADSPG
Trigger: TCCGGGAGAGTCAGCACACCGGGCAGAGGGCGGGCAGCGGCTCACACCGCATGGGTCGGCAGGGAGAAGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CAA 90 bp CCCGCCACCCGCCCACCCACCTGGGCACTCACCCCAGTGTTGAGCTaGACAGCGGTGCGCTCCTCCTCGATGAGGGCTCCAATGCCGTCG +
Preference number: 6 (lower is better)
Translates to: PATRPPTWALTPVLS*TAVRSSSMRAPMPS
Trigger: CGACGGCATTGGAGCCCTCATCGAGGAGGAGCGCACCGCTGTCAAGCTCAACACTGGGGTGAGTGCCCAGGTGGGTGGGCGGGTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CAA 90 bp CCTTCCCCCGCCACCCGCCCACCCACCTGGGCACTCACCCCAGTGTaGAGCTTGACAGCGGTGCGCTCCTCCTCGATGAGGGCTCCAATG +
Preference number: 6 (lower is better)
Translates to: PSPATRPPTWALTPV*SLTAVRSSSMRAPM
Trigger: CATTGGAGCCCTCATCGAGGAGGAGCGCACCGCTGTCAAGCTCAACACTGGGGTGAGTGCCCAGGTGGGTGGGCGGGTGGCGGGGGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS TCA 72 bp GTAAGATGGGCCCTGCTTGCCCGTCCTGTCCCTGCCTaGTGGCGAGACAGCCGCCACCCCTCATCGCCCCTC +
Preference number: 6 (lower is better)
Translates to: VRWALLARPVPA*WRDSRHPSSPL
Trigger: GAGGGGCGATGAGGGGTGGCGGCTGTCTCGCCATCAGGCAGGGACAGGACGGGCAAGCAGGGCCCATCTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 72 bp CAATGCCGTCGGAGGGGTCCATGGCCCCACAGAGGTTaGTGTCCACAGCCCAGTCGCTGGCGCGCCTCTCGT +
Preference number: 6 (lower is better)
Translates to: QCRRRGPWPHRG*CPQPSRWRASR
Trigger: ACGAGAGGCGCGCCAGCGACTGGGCTGTGGACAGCAACCTCTGTGGGGCCATGGACCCCTCCGACGGCATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp GCCCCAGCGCTGCTCTCCAGCGTGGCGTTGGGCACGTaGTGGTGGACCAGCTGGGAGATGTCTTCCGGGTTG +
Preference number: 6 (lower is better)
Translates to: APALLSSVALGT*WWTSWEMSSGL
Trigger: CAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp TGGCCCCACAGAGGTTGCTGTCCACAGCCCAGTCGCTaGCGCGCCTCTCGTGCTGGTACTGCAGGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: WPHRGCCPQPSR*RASRAGTAGQG
Trigger: TCCCTGCCCTGCAGTACCAGCACGAGAGGCGCGCCAGCGACTGGGCTGTGGACAGCAACCTCTGTGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp GACAGCTCGGCCCCAGCGCTGCTCTCCAGCGTGGCGTaGGGCACGTGGTGGTGGACCAGCTGGGAGATGTCT +
Preference number: 6 (lower is better)
Translates to: DSSAPALLSSVA*GTWWWTSWEMS
Trigger: AGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGAGCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp GCCACCCGCCCACCCACCTGGGCACTCACCCCAGTGTaGAGCTTGACAGCGGTGCGCTCCTCCTCGATGAGG +
Preference number: 6 (lower is better)
Translates to: ATRPPTWALTPV*SLTAVRSSSMR
Trigger: CCTCATCGAGGAGGAGCGCACCGCTGTCAAGCTCAACACTGGGGTGAGTGCCCAGGTGGGTGGGCGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CAA 72 bp CGCAGACTCTCCTCTGCATGGGCTTACATGAGGCGTTaGGGGGCTGCTCGCCCTTCCCCCGCCACCCGCCCA +
Preference number: 6 (lower is better)
Translates to: RRLSSAWAYMRR*GAARPSPATRP
Trigger: TGGGCGGGTGGCGGGGGAAGGGCGAGCAGCCCCCAAACGCCTCATGTAAGCCCATGCAGAGGAGAGTCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CAA 90 bp CGCTGCCCGCCCTCTGCCCGGTGTGCTGACTCTCCCGGACCCTGTTaGCGCCCTCGCAGACTCTCCTCTGCATGGGCTTACATGAGGCGT +
Preference number: 6 (lower is better)
Translates to: RCPPSARCADSPGPC*RPRRLSSAWAYMRR
Trigger: ACGCCTCATGTAAGCCCATGCAGAGGAGAGTCTGCGAGGGCGCAAACAGGGTCCGGGAGAGTCAGCACACCGGGCAGAGGGCGGGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS TCA 72 bp CTCGATGAGGAAGAGCAGGATGAGGTAGGCGCACCCTaGGGCGGCCATGGAGGCCACAAACCGGCCGACCCC +
Preference number: 6 (lower is better)
Translates to: LDEEEQDEVGAP*GGHGGHKPADP
Trigger: GGGGTCGGCCGGTTTGTGGCCTCCATGGCCGCCTCAGGGTGCGCCTACCTCATCCTGCTCTTCCTCATCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
ENST00000569062.1
CDS TCA 72 bp TGCGCCCTCGCAGACTCTCCTCTGCATGGGCTTACATaGGGCGTTTGGGGGCTGCTCGCCCTTCCCCCGCCA +
Preference number: 6 (lower is better)
Translates to: CALADSPLHGLT*GVWGLLALPPP
Trigger: TGGCGGGGGAAGGGCGAGCAGCCCCCAAACGCCTCATGTAAGCCCATGCAGAGGAGAGTCTGCGAGGGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 72 bp GCGCTGCTCTCCAGCGTGGCGTTGGGCACGTGGTGGTaGACCAGCTGGGAGATGTCTTCCGGGTTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: ALLSSVALGTWW*TSWEMSSGLQC
Trigger: GCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp CCAGCGCTGCTCTCCAGCGTGGCGTTGGGCACGTGGTaGTGGACCAGCTGGGAGATGTCTTCCGGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: PALLSSVALGTW*WTSWEMSSGLQ
Trigger: CTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp ACAGCTCGGCCCCAGCGCTGCTCTCCAGCGTGGCGTTaGGCACGTGGTGGTGGACCAGCTGGGAGATGTCTT +
Preference number: 6 (lower is better)
Translates to: TARPQRCSPAWR*ARGGGPAGRCL
Trigger: AAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp CGCCCACCCACCTGGGCACTCACCCCAGTGTTGAGCTaGACAGCGGTGCGCTCCTCCTCGATGAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: RPPTWALTPVLS*TAVRSSSMRAP
Trigger: TGGAGCCCTCATCGAGGAGGAGCGCACCGCTGTCAAGCTCAACACTGGGGTGAGTGCCCAGGTGGGTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS TCA 72 bp ACAGCTGGCGTGTGGCGGCATCGGCATGGTACTCCATaGTGGCCCGGTCCACAGCATGCTGCACGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: TAGVWRHRHGTP*WPGPQHAARPG
Trigger: TCCTGGCCGTGCAGCATGCTGTGGACCGGGCCATCATGGAGTACCATGCCGATGCCGCCACACGCCAGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 72 bp GGGAGGTCCCGGGAACTGAGAAGGGCACGACGGTTCTaGCGTACTCGCCCAAGGTCAGCCTCAGCATGGGGT +
Preference number: 6 (lower is better)
Translates to: GRSRELRRARRF*RTRPRSASAWG
Trigger: ACCCCATGCTGAGGCTGACCTTGGGCGAGTACGGCAGAACCGTCGTGCCCTTCTCAGTTCCCGGGACCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 72 bp AGTTGCTCCATTCAAACGCTTCTCCCTGCCGACCCATaGGGTGTGAGCCGCTGCCCGCCCTCTGCCCGGTGT +
Preference number: 6 (lower is better)
Translates to: SCSIQTLLPADP*GVSRCPPSARC
Trigger: ACACCGGGCAGAGGGCGGGCAGCGGCTCACACCGCATGGGTCGGCAGGGAGAAGCGTTTGAATGGAGCAACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS GCA 72 bp CAGGGCAGCAACAGCCCGCCTGAGAGGCACAGGCTCTaGGTGAATCCTGGGCTGCCTCCTGACCAGGACAGA +
Preference number: 6 (lower is better)
Translates to: QGSNSPPERHRL*VNPGLPPDQDR
Trigger: TCTGTCCTGGTCAGGAGGCAGCCCAGGATTCACGCAGAGCCTGTGCCTCTCAGGCGGGCTGTTGCTGCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566200.1
ENST00000569062.1
CDS CCA 72 bp TCCAGCGTGGCGTTGGGCACGTGGTGGTGGACCAGCTaGGAGATGTCTTCCGGGTTGCAGTGCGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSVALGTWWWTS*EMSSGLQCGSF
Trigger: GAAGGAGCCGCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp CAGGAGACAGGAGCTGCCATGCGAGGATGGAGGCGGTaGTGGGGAGTAGGTGCAGCCAGGAGCTCAGGATGC +
Preference number: 6 (lower is better)
Translates to: QETGAAMRGWRR*WGVGAARSSGC
Trigger: GCATCCTGAGCTCCTGGCTGCACCTACTCCCCACCACCGCCTCCATCCTCGCATGGCAGCTCCTGTCTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS CAA 72 bp CCCAGCACCTGCCCGAAGCAGAAGTCGTCGTCCACGTaGACGGGACTCAGGAGGTCTCGCCACTGGATGCCC +
Preference number: 6 (lower is better)
Translates to: PSTCPKQKSSST*TGLRRSRHWMP
Trigger: GGGCATCCAGTGGCGAGACCTCCTGAGTCCCGTCAACGTGGACGACGACTTCTGCTTCGGGCAGGTGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp CCCTCTGCCCGGTGTGCTGACTCTCCCGGACCCTGTTaGCGCCCTCGCAGACTCTCCTCTGCATGGGCTTAC +
Preference number: 6 (lower is better)
Translates to: PSARCADSPGPC*RPRRLSSAWAY
Trigger: GTAAGCCCATGCAGAGGAGAGTCTGCGAGGGCGCAAACAGGGTCCGGGAGAGTCAGCACACCGGGCAGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CAA 90 bp AGGATGAAAGACAGCTCGGCCCCAGCGCTGCTCTCCAGCGTGGCGTaGGGCACGTGGTGGTGGACCAGCTGGGAGATGTCTTCCGGGTTG +
Preference number: 6 (lower is better)
Translates to: RMKDSSAPALLSSVA*GTWWWTSWEMSSGL
Trigger: CAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACGTGCCCAACGCCACGCTGGAGAGCAGCGCTGGGGCCGAGCTGTCTTTCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS TCA 72 bp CCAGCACCTGCCCGAAGCAGAAGTCGTCGTCCACGTTaGCGGGACTCAGGAGGTCTCGCCACTGGATGCCCA +
Preference number: 6 (lower is better)
Translates to: PAPARSRSRRPR*RDSGGLATGCP
Trigger: TGGGCATCCAGTGGCGAGACCTCCTGAGTCCCGTCAACGTGGACGACGACTTCTGCTTCGGGCAGGTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 72 bp TCCCGGACCCTGTTTGCGCCCTCGCAGACTCTCCTCTaGATGGGCTTACATGAGGCGTTTGGGGGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SRTLFAPSQTLL*MGLHEAFGGCS
Trigger: CGAGCAGCCCCCAAACGCCTCATGTAAGCCCATGCAGAGGAGAGTCTGCGAGGGCGCAAACAGGGTCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 72 bp GTGAAGCTGAGCAGCAGCAGCAGGGGCAGCTGGTACTaGATGGCCACGAGGAAGGGGTCTGCGATGAACGGC +
Preference number: 6 (lower is better)
Translates to: VKLSSSSRGSWY*MATRKGSAMNG
Trigger: GCCGTTCATCGCAGACCCCTTCCTCGTGGCCATCCAGTACCAGCTGCCCCTGCTGCTGCTGCTCAGCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp AGATGGCCCTCCTGGAGATGGCGTCCATGCCCGAGGTaGGCTCGTCCAGTATCAGCACCTTGGAGCCTGCGA +
Preference number: 6 (lower is better)
Translates to: RWPSWRWRPCPR*ARPVSAPWSLR
Trigger: TCGCAGGCTCCAAGGTGCTGATACTGGACGAGCCCACCTCGGGCATGGACGCCATCTCCAGGAGGGCCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp ACGGCCAGGGCAGTGGCTGGAGAGTGGTACGCCTGGTaGTTGAACAAGGCGTTGACGACCGTGCGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: TARAVAGEWYAW*LNKALTTVRSP
Trigger: GGGAGAGCGCACGGTCGTCAACGCCTTGTTCAACAACCAGGCGTACCACTCTCCAGCCACTGCCCTGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 72 bp CTGGCCACGTGGACTCCACTCACAAACTGCACATGCTaGGCCTGCACGGCCCTCTCGCTGACCGCCAGGATG +
Preference number: 6 (lower is better)
Translates to: LATWTPLTNCTC*ACTALSLTARM
Trigger: CATCCTGGCGGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAGTCCACGTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 90 bp GCCACGAGGAAGGGGTCTGCGATGAACGGCGGGTACGGGAACCTCTaGATGGTCACCGTCAGTCTCTGGAACAGCTGGCGTGTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: ATRKGSAMNGGYGNL*MVTVSLWNSWRVAA
Trigger: TGCCGCCACACGCCAGCTGTTCCAGAGACTGACGGTGACCATCAAGAGGTTCCCGTACCCGCCGTTCATCGCAGACCCCTTCCTCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 90 bp AGCAGCATCCCCAGCACCTGCCCGAAGCAGAAGTCGTCGTCCACGTaGACGGGACTCAGGAGGTCTCGCCACTGGATGCCCATGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SSIPSTCPKQKSSST*TGLRRSRHWMPMPF
Trigger: GAAAGGCATGGGCATCCAGTGGCGAGACCTCCTGAGTCCCGTCAACGTGGACGACGACTTCTGCTTCGGGCAGGTGCTGGGGATGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000563623.5
CDS CAA 90 bp AGCAGCATCCCCAGCACCTGCCCGAAGCAGAAGTCGTCGTCCACGTaGACGGGACTCAGGAGGTCTCGCCACTGGATGCCCATGCCTTTG +
Preference number: 6 (lower is better)
Translates to: SSIPSTCPKQKSSST*TGLRRSRHWMPMPL
Trigger: CAAAGGCATGGGCATCCAGTGGCGAGACCTCCTGAGTCCCGTCAACGTGGACGACGACTTCTGCTTCGGGCAGGTGCTGGGGATGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382381.7
CDS TCA 72 bp AGACCACAATGGAGGCGTGAGGCCCGCACAGCAGCTTaGACAGAAGGTTGTCCACGACGGCCAGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: RPQWRREARTAA*TEGCPRRPGQW
Trigger: CCACTGCCCTGGCCGTCGTGGACAACCTTCTGTTCAAGCTGCTGTGCGGGCCTCACGCCTCCATTGTGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 72 bp CGGGGCTGGGGGAAGTTGGAGACCACAATGGAGGCGTaGGGCCCGCACAGCAGCTTGAACAGAAGGTTGTCC +
Preference number: 6 (lower is better)
Translates to: RGWGKLETTMEA*GPHSSLNRRLS
Trigger: GGACAACCTTCTGTTCAAGCTGCTGTGCGGGCCTCACGCCTCCATTGTGGTCTCCAACTTCCCCCAGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 72 bp GAGACCGTTACAAGCACCGAGGGGTGTGTGGGAGGCTaGGGAGGCCCCACAGGACAGGTCCAAGTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: ETVTSTEGCVGG*GGPTGQVQVLS
Trigger: GGACAGAACTTGGACCTGTCCTGTGGGGCCTCCTCAGCCTCCCACACACCCCTCGGTGCTTGTAACGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566200.1
ENST00000569062.1
CDS GCA 72 bp CTAGAGAGCCCCTGGTGCTGGTCCACTCGCTACAACTaGAGGCAGAGAGGAGTCCTTCCCGCTCAGCGTCCT +
Preference number: 6 (lower is better)
Translates to: LESPWCWSTRYN*RQRGVLPAQRP
Trigger: AGGACGCTGAGCGGGAAGGACTCCTCTCTGCCTGCAGTTGTAGCGAGTGGACCAGCACCAGGGGCTCTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 72 bp GGGCAGCTGGTACTGGATGGCCACGAGGAAGGGGTCTaGGATGAACGGCGGGTACGGGAACCTCTTGATGGT +
Preference number: 6 (lower is better)
Translates to: GQLVLDGHEEGV*DERRVREPLDG
Trigger: ACCATCAAGAGGTTCCCGTACCCGCCGTTCATCGCAGACCCCTTCCTCGTGGCCATCCAGTACCAGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 72 bp AAACTGGCCACGTGGACTCCACTCACAAACTGCACATaGTTGGCCTGCACGGCCCTCTCGCTGACCGCCAGG +
Preference number: 6 (lower is better)
Translates to: KLATWTPLTNCT*LACTALSLTAR
Trigger: CCTGGCGGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAGTCCACGTGGCCAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 72 bp AGTCTCTGGAACAGCTGGCGTGTGGCGGCATCGGCATaGTACTCCATGATGGCCCGGTCCACAGCATGCTGC +
Preference number: 6 (lower is better)
Translates to: SLWNSWRVAASA*YSMMARSTACC
Trigger: GCAGCATGCTGTGGACCGGGCCATCATGGAGTACCATGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp GATTTGAGACAGGAGACAGGAGCTGCCATGCGAGGATaGAGGCGGTGGTGGGGAGTAGGTGCAGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: DLRQETGAAMRG*RRWWGVGAARS
Trigger: GCTCCTGGCTGCACCTACTCCCCACCACCGCCTCCATCCTCGCATGGCAGCTCCTGTCTCCTGTCTCAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS CCA 72 bp TCCAGGCATAGAAGTTCTCCTGGTACTGGATGTCTGTaGGGCGAGGGAGTCACTGTGCCCCGAGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: SRHRSSPGTGCL*GEGVTVPRGLG
Trigger: CCCCAGGCCTCGGGGCACAGTGACTCCCTCGCCCCACAGACATCCAGTACCAGGAGAACTTCTATGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566200.1
ENST00000569062.1
CDS CAA 72 bp GCCAGGGCAGTGGCTGGAGAGTGGTACGCCTGGTTGTaGAACAAGGCGTTGACGACCGTGCGCTCTCCCACA +
Preference number: 6 (lower is better)
Translates to: ARAVAGEWYAWL*NKALTTVRSPT
Trigger: TGTGGGAGAGCGCACGGTCGTCAACGCCTTGTTCAACAACCAGGCGTACCACTCTCCAGCCACTGCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 90 bp CTCGCGCCAGCTGTATGCGGCCTTCTTCAGGAACATGGCCCAGAATaGCTGGCAGTGCAGGGCGAGCCCAGTGTTGAGCTTGACAGCGGT +
Preference number: 6 (lower is better)
Translates to: LAPAVCGLLQEHGPE*LAVQGEPSVELDSG
Trigger: ACCGCTGTCAAGCTCAACACTGGGCTCGCCCTGCACTGCCAGCAATTCTGGGCCATGTTCCTGAAGAAGGCCGCATACAGCTGGCGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 90 bp TCCACGACGGCCAGGGCAGTGGCTGGAGAGTGGTACGCCTGGTTGTaGAACAAGGCGTTGACGACCGTGCGCTCTCCCACATCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: STTARAVAGEWYAWL*NKALTTVRSPTSLK
Trigger: CTTCAGAGATGTGGGAGAGCGCACGGTCGTCAACGCCTTGTTCAACAACCAGGCGTACCACTCTCCAGCCACTGCCCTGGCCGTCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 90 bp TTGTCCACGACGGCCAGGGCAGTGGCTGGAGAGTGGTACGCCTGGTaGTTGAACAAGGCGTTGACGACCGTGCGCTCTCCCACATCTCTG +
Preference number: 6 (lower is better)
Translates to: LSTTARAVAGEWYAW*LNKALTTVRSPTSL
Trigger: CAGAGATGTGGGAGAGCGCACGGTCGTCAACGCCTTGTTCAACAACCAGGCGTACCACTCTCCAGCCACTGCCCTGGCCGTCGTGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 90 bp AGCCAGAAACTGGCCACGTGGACTCCACTCACAAACTGCACATGCTaGGCCTGCACGGCCCTCTCGCTGACCGCCAGGATGGAGAACGTG +
Preference number: 6 (lower is better)
Translates to: SQKLATWTPLTNCTC*ACTALSLTARMENV
Trigger: CACGTTCTCCATCCTGGCGGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAGTCCACGTGGCCAGTTTCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 72 bp GACCTTCAAACCTGTGCGTGCTCTCTCTGGGAAGGATaGAAGACAGCTCGGCCCCAGCGCTGCTCTCCAGCG +
Preference number: 6 (lower is better)
Translates to: DLQTCACSLWEG*KTARPQRCSPA
Trigger: CGCTGGAGAGCAGCGCTGGGGCCGAGCTGTCTTTCATCCTTCCCAGAGAGAGCACGCACAGGTTTGAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS TCA 72 bp CAAACTGCACATGCTTGGCCTGCACGGCCCTCTCGCTaGCCGCCAGGATGGAGAACGTGCTGGCCAAGAATG +
Preference number: 6 (lower is better)
Translates to: QTAHAWPARPSR*PPGWRTCWPRM
Trigger: CATTCTTGGCCAGCACGTTCTCCATCCTGGCGGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 72 bp CTCCTCCGGAGGGCGCAGAGGATGCCCCTGAGTCTCTaGAGCAGGTTGGTCTCGATGAGGAAGAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: LLRRAQRMPLSL*SRLVSMRKSRM
Trigger: CATCCTGCTCTTCCTCATCGAGACCAACCTGCTTCAGAGACTCAGGGGCATCCTCTGCGCCCTCCGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
ENST00000569062.1
CDS GCA 72 bp GGAGGGAAAGCCGCGCACTCGCATGTTGATCACAAGTaGCCTGCGCACTGTCTCAGTGACGGTCTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: GGKAAHSHVDHK*PAHCLSDGLGS
Trigger: GCTGCCAAGACCGTCACTGAGACAGTGCGCAGGGCACTTGTGATCAACATGCGAGTGCGCGGCTTTCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS GCA 72 bp CGTGGTGGTGGACCAGCTGGGAGATGTCTTCCGGGTTaGAGTGCGGCTCCTTCACCAGCGTCATGTGATAGC +
Preference number: 6 (lower is better)
Translates to: RGGGPAGRCLPG*SAAPSPASCDS
Trigger: GCTATCACATGACGCTGGTGAAGGAGCCGCACTGCAACCCGGAAGACATCTCCCAGCTGGTCCACCACCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 72 bp GCAGGGCAGGGAGCTGGATGGCCTGGATGTCCATACTaGTGTCCACCAGCTTCCCGACCCGAAGGAAGACTT +
Preference number: 6 (lower is better)
Translates to: AGQGAGWPGCPY*CPPASRPEGRL
Trigger: AAGTCTTCCTTCGGGTCGGGAAGCTGGTGGACAGCAGTATGGACATCCAGGCCATCCAGCTCCCTGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 72 bp AGCCAGAAACTGGCCACGTGGACTCCACTCACAAACTaGACATGCTTGGCCTGCACGGCCCTCTCGCTGACC +
Preference number: 6 (lower is better)
Translates to: SQKLATWTPLTN*TCLACTALSLT
Trigger: GGTCAGCGAGAGGGCCGTGCAGGCCAAGCATGTGCAGTTTGTGAGTGGAGTCCACGTGGCCAGTTTCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 72 bp GAGAAATTCCAGTTGCTCCATTCAAACGCTTCTCCCTaGCGACCCATGCGGTGTGAGCCGCTGCCCGCCCTC +
Preference number: 6 (lower is better)
Translates to: EKFQLLHSNASP*RPMRCEPLPAL
Trigger: GAGGGCGGGCAGCGGCTCACACCGCATGGGTCGGCAGGGAGAAGCGTTTGAATGGAGCAACTGGAATTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS CCA 72 bp GGGTACGGGAACCTCTTGATGGTCACCGTCAGTCTCTaGAACAGCTGGCGTGTGGCGGCATCGGCATGGTAC +
Preference number: 6 (lower is better)
Translates to: GYGNLLMVTVSL*NSWRVAASAWY
Trigger: GTACCATGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACTGACGGTGACCATCAAGAGGTTCCCGTACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp TGCGGTCACTTTTCTGCCGCTGAAGAAGATCCCAGATaGCCCTCCTGGAGATGGCGTCCATGCCCGAGGTGG +
Preference number: 6 (lower is better)
Translates to: CGHFSAAEEDPR*PSWRWRPCPRW
Trigger: CCACCTCGGGCATGGACGCCATCTCCAGGAGGGCCATCTGGGATCTTCTTCAGCGGCAGAAAAGTGACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp ACCACCACTGTACGTCCTGACCAGCTTGTTGGCATGTaGCTCCAGCAGCAGGCCCCGCAGAGTGTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: TTTVRPDQLVGM*LQQQAPQSVLH
Trigger: GTGGAGAACACTCTGCGGGGCCTGCTGCTGGAGCCACATGCCAACAAGCTGGTCAGGACGTACAGTGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
CDS CAA 72 bp TGGCCCAGCAGGACGGTGATCTGTCCCTCGTACAGGTaGAGGTTCAGGTCTCTGACGGCCGCCCTGTCCTTA +
Preference number: 6 (lower is better)
Translates to: WPSRTVICPSYR*RFRSLTAALSL
Trigger: TAAGGACAGGGCGGCCGTCAGAGACCTGAACCTCAACCTGTACGAGGGACAGATCACCGTCCTGCTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp CGCTTGTTACCACCACTGTACGTCCTGACCAGCTTGTaGGCATGTGGCTCCAGCAGCAGGCCCCGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: RLLPPLYVLTSL*ACGSSSRPRRV
Trigger: CACTCTGCGGGGCCTGCTGCTGGAGCCACATGCCAACAAGCTGGTCAGGACGTACAGTGGTGGTAACAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
CDS TCA 72 bp ACAAGAGGAACCAGGCACTCCAGTGCAGCCAGCTGCTaGGCCCCATCATGCGCATGTACTCCTTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: TRGTRHSSAASC*APSCACTPSAS
Trigger: GGAGGCTGAAGGAGTACATGCGCATGATGGGGCTCAGCAGCTGGCTGCACTGGAGTGCCTGGTTCCTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS TCA 72 bp GTGGTCAGCACGATGGTGCGGTCACTTTTCTGCCGCTaGAGAAGATCCCAGATGGCCCTCCTGGAGATGGCG +
Preference number: 6 (lower is better)
Translates to: VVSTMVRSLFCR*RRSQMALLEMA
Trigger: CGCCATCTCCAGGAGGGCCATCTGGGATCTTCTTCAGCGGCAGAAAAGTGACCGCACCATCGTGCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS TCA 72 bp CGCTGCCGCACCTTTCCGACATCAGAGCTGATTCTGTaGCCCCCGACAAAGGCATCCCCAGAAGTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: RCRTFPTSELIL*PPTKASPEVRL
Trigger: GAGCCTCACTTCTGGGGATGCCTTTGTCGGGGGTCACAGAATCAGCTCTGATGTCGGAAAGGTGCGGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
CDS TCA 72 bp AGCCGATCCGCTGCCGCACCTTTCCGACATCAGAGCTaGTTCTGTGACCCCCGACAAAGGCATCCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SRSAAAPFRHQS*FCDPRQRHPQK
Trigger: CTTCTGGGGATGCCTTTGTCGGGGGTCACAGAATCAGCTCTGATGTCGGAAAGGTGCGGCAGCGGATCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
CDS GCA 72 bp ACAGCTCAGAGAGGGGCCAGGCACGTAACAATCCAATaGAGTCCCATGAGCGACATGGCAGACCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: TAQRGARHVTIQ*SPMSDMADPGQ
Trigger: CTGCCCTGGGTCTGCCATGTCGCTCATGGGACTGCATTGGATTGTTACGTGCCTGGCCCCTCTCTGAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566200.1
ENST00000569062.1
CDS CCA 72 bp GCTCCTGGATGGACTGGCCCGGGTAGATGGTGGCGTTaGGCACATTTTCCGACTGAATCTTCAAGCGGAGCC +
Preference number: 6 (lower is better)
Translates to: APGWTGPGRWWR*AHFPTESSSGA
Trigger: GGCTCCGCTTGAAGATTCAGTCGGAAAATGTGCCCAACGCCACCATCTACCCGGGCCAGTCCATCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CCA 72 bp GGGGCCAGGATGCGGGTCCTCTCGTCCGCTACATCTTaGTCCTCAGGAAGCACAGGCATCCGGGTGTATAAT +
Preference number: 6 (lower is better)
Translates to: GARMRVLSSATS*SSGSTGIRVYN
Trigger: ATTATACACCCGGATGCCTGTGCTTCCTGAGGACCAAGATGTAGCGGACGAGAGGACCCGCATCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000566200.1
ENST00000569062.1
CDS CAA 72 bp AAGGGGTCTGCGATGAACGGCGGGTACGGGAACCTCTaGATGGTCACCGTCAGTCTCTGGAACAGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: KGSAMNGGYGNL*MVTVSLWNSWR
Trigger: ACGCCAGCTGTTCCAGAGACTGACGGTGACCATCAAGAGGTTCCCGTACCCGCCGTTCATCGCAGACCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 72 bp TGCTTTCTCGGGGTCACTGTCTTCTTCCTCCTTCCCTaGAACCGCCCTTGGCTTCCCACACCAATAGGAGGG +
Preference number: 6 (lower is better)
Translates to: CFLGVTVFFLLP*NRPWLPTPIGG
Trigger: CCCTCCTATTGGTGTGGGAAGCCAAGGGCGGTTGCAGGGAAGGAGGAAGAAGACAGTGACCCCGAGAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS GCA 72 bp CTGTGCCGCCACCATTTTCCACTCGCGCCAGCTGTATaGGGCCTTCTTCAGGAACATGGCCCAGAATTGCTG +
Preference number: 6 (lower is better)
Translates to: LCRHHFPLAPAV*GLLQEHGPELL
Trigger: CAGCAATTCTGGGCCATGTTCCTGAAGAAGGCCGCATACAGCTGGCGCGAGTGGAAAATGGTGGCGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 72 bp CCTCCGCGTCTCGTAGTTCTCGTAGAAACTGCTGACTaGCATCCCCAGACAGTGGTTGGGCAGCACCAGGAA +
Preference number: 6 (lower is better)
Translates to: PPRLVVLVETAD*HPQTVVGQHQE
Trigger: TTCCTGGTGCTGCCCAACCACTGTCTGGGGATGGCAGTCAGCAGTTTCTACGAGAACTACGAGACGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 72 bp GAGGCAGCTCCTGGATGGACTGGCCCGGGTAGATGGTaGCGTTGGGCACATTTTCCGACTGAATCTTCAAGC +
Preference number: 6 (lower is better)
Translates to: EAAPGWTGPGRW*RWAHFPTESSS
Trigger: GCTTGAAGATTCAGTCGGAAAATGTGCCCAACGCCACCATCTACCCGGGCCAGTCCATCCAGGAGCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CCA 72 bp AGGCTGCTCAAGGCGCCTGTAACAATGTCCCCTCCATaGGGAGATGTGAAGGCCAGTAGGTCACAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RLLKAPVTMSPP*GDVKASRSQLP
Trigger: AGGCAGCTGTGACCTACTGGCCTTCACATCTCCCCATGGAGGGGACATTGTTACAGGCGCCTTGAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566200.1
ENST00000569062.1
CDS CAA 72 bp TTTCCCACCCTGAACACCTTGGACAGGTGCTTGATCTaGATCCCCGCCACCAGGTCCTCTGGCTCGGCTTCA +
Preference number: 6 (lower is better)
Translates to: FPTLNTLDRCLI*IPATRSSGSAS
Trigger: TGAAGCCGAGCCAGAGGACCTGGTGGCGGGGATCAAGATCAAGCACCTGTCCAAGGTGTTCAGGGTGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp GCTGTATGCGGCCTTCTTCAGGAACATGGCCCAGAATaGCTGGCAGTGCAGGGCGAGCCCAGTGTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: AVCGLLQEHGPE*LAVQGEPSVEL
Trigger: AAGCTCAACACTGGGCTCGCCCTGCACTGCCAGCAATTCTGGGCCATGTTCCTGAAGAAGGCCGCATACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 72 bp GCTGGAGAGTGGTACGCCTGGTTGTTGAACAAGGCGTaGACGACCGTGCGCTCTCCCACATCTCTGAAGGAC +
Preference number: 6 (lower is better)
Translates to: AGEWYAWLLNKA*TTVRSPTSLKD
Trigger: GTCCTTCAGAGATGTGGGAGAGCGCACGGTCGTCAACGCCTTGTTCAACAACCAGGCGTACCACTCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 90 bp AGGATGGAGAACGTGCTGGCCAAGAATGCCATGGCGAAGAGCAGGTaGAGGGCAATGTCGAATCCCTTCCGGCCCTCGTTAAACTGGTCC +
Preference number: 6 (lower is better)
Translates to: RMENVLAKNAMAKSR*RAMSNPFRPSLNWS
Trigger: GGACCAGTTTAACGAGGGCCGGAAGGGATTCGACATTGCCCTCAACCTGCTCTTCGCCATGGCATTCTTGGCCAGCACGTTCTCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS TCA 72 bp GCGCATGATGGTGACCATCAGGAAGGTGGCGATGCCTaGCAGGATGTTGAAGATGGTCAGCCTCGTGTAGGC +
Preference number: 6 (lower is better)
Translates to: AHDGDHQEGGDA*QDVEDGQPRVG
Trigger: GCCTACACGAGGCTGACCATCTTCAACATCCTGTCAGGCATCGCCACCTTCCTGATGGTCACCATCATGCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS GCA 72 bp ATTTCTTGCAGTAGTGGGCGGCGACCTCGGAGGAGGTaGAGTACCTCCGCGTCTCGTAGTTCTCGTAGAAAC +
Preference number: 6 (lower is better)
Translates to: ISCSSGRRPRRR*STSASRSSRRN
Trigger: GTTTCTACGAGAACTACGAGACGCGGAGGTACTGCACCTCCTCCGAGGTCGCCGCCCACTACTGCAAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CCA 72 bp AACCTCTTGATGGTCACCGTCAGTCTCTGGAACAGCTaGCGTGTGGCGGCATCGGCATGGTACTCCATGATG +
Preference number: 6 (lower is better)
Translates to: NLLMVTVSLWNS*RVAASAWYSMM
Trigger: CATCATGGAGTACCATGCCGATGCCGCCACACGCCAGCTGTTCCAGAGACTGACGGTGACCATCAAGAGGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp TCGTCCACGTTGACGGGACTCAGGAGGTCTCGCCACTaGATGCCCATGCCTTTCGCCTCAAATTTCCCAATG +
Preference number: 6 (lower is better)
Translates to: SSTLTGLRRSRH*MPMPFASNFPM
Trigger: CATTGGGAAATTTGAGGCGAAAGGCATGGGCATCCAGTGGCGAGACCTCCTGAGTCCCGTCAACGTGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000563623.5
CDS CCA 72 bp TATGCGGCCTTCTTCAGGAACATGGCCCAGAATTGCTaGCAGTGCAGGGCGAGCCCAGTGTTGAGCTTGACA +
Preference number: 6 (lower is better)
Translates to: YAAFFRNMAQNC*QCRASPVLSLT
Trigger: TGTCAAGCTCAACACTGGGCTCGCCCTGCACTGCCAGCAATTCTGGGCCATGTTCCTGAAGAAGGCCGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000382381.7
CDS CAA 90 bp GTTGAGCAGGGTGCTGTGCCTGAGGTAGAGCATGAGAAATTCCAGTaGCTCCATTCAAACGCTTCTCCCTGCCGACCCATGCGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: VEQGAVPEVEHEKFQ*LHSNASPCRPMRCE
Trigger: CTCACACCGCATGGGTCGGCAGGGAGAAGCGTTTGAATGGAGCAACTGGAATTTCTCATGCTCTACCTCAGGCACAGCACCCTGCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS GCA 72 bp GCAGAGAGGAGTCCTTCCCGCTCAGCGTCCTTCATGTaGGGAAAAGCCTCCTTGACTCACAGTGGAAGAGTT +
Preference number: 6 (lower is better)
Translates to: AERSPSRSASFM*GKASLTHSGRV
Trigger: AACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGAGCGGGAAGGACTCCTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CAA 90 bp AGGAGTCCTTCCCGCTCAGCGTCCTTCATGTGCGGAAAAGCCTCCTaGACTCACAGTGGAAGAGTTTCAGGTTCAGTTGCTCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: RSPSRSASFMCGKAS*THSGRVSGSVAQLH
Trigger: GTGGAGCTGAGCAACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGAGCGGGAAGGACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS TCA 72 bp GCGCTGCAACCCGCAGGAAATAGGAGAAACGTGCTCTaGAAACTGAGTGTAAAGAGGGCGAGGTGTGCAGAC +
Preference number: 6 (lower is better)
Translates to: ALQPAGNRRNVL*KLSVKRARCAD
Trigger: GTCTGCACACCTCGCCCTCTTTACACTCAGTTTTCAGAGCACGTTTCTCCTATTTCCTGCGGGTTGCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS TCA 72 bp CCAGGTCCTCTGGCTCGGCTTCAAAGTACTCGTTTCTaGGTGCTTTCTCGGGGTCACTGTCTTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PGPLARLQSTRF*VLSRGHCLLPP
Trigger: AGGAGGAAGAAGACAGTGACCCCGAGAAAGCACTCAGAAACGAGTACTTTGAAGCCGAGCCAGAGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CCA 72 bp ATGCCCATGCCTTTCGCCTCAAATTTCCCAATGAGCTaGGCTCCCATTGCCATGGCGACATTAGACAGGAGG +
Preference number: 6 (lower is better)
Translates to: MPMPFASNFPMS*APIAMATLDRR
Trigger: CCTCCTGTCTAATGTCGCCATGGCAATGGGAGCCCAGCTCATTGGGAAATTTGAGGCGAAAGGCATGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000563623.5
CDS CCA 72 bp CAGGTGCTTGATCTTGATCCCCGCCACCAGGTCCTCTaGCTCGGCTTCAAAGTACTCGTTTCTGAGTGCTTT +
Preference number: 6 (lower is better)
Translates to: QVLDLDPRHQVL*LGFKVLVSECF
Trigger: AAAGCACTCAGAAACGAGTACTTTGAAGCCGAGCCAGAGGACCTGGTGGCGGGGATCAAGATCAAGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
CDS CAA 72 bp GGTGCTGTGCCTGAGGTAGAGCATGAGAAATTCCAGTaGCTCCATTCAAACGCTTCTCCCTGCCGACCCATG +
Preference number: 6 (lower is better)
Translates to: GAVPEVEHEKFQ*LHSNASPCRPM
Trigger: CATGGGTCGGCAGGGAGAAGCGTTTGAATGGAGCAACTGGAATTTCTCATGCTCTACCTCAGGCACAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563623.5
CDS GCA 72 bp GATGTAGGTGAAGAAGTAGAGGAAGCCTCCGAAGGCTaGTGCCATGTTGGCTTTGCTGAAGAAGGTGCTGAC +
Preference number: 6 (lower is better)
Translates to: DVGEEVEEASEG*CHVGFAEEGAD
Trigger: GTCAGCACCTTCTTCAGCAAAGCCAACATGGCAGCAGCCTTCGGAGGCTTCCTCTACTTCTTCACCTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301732.10
ENST00000563623.5
CDS CAA 72 bp TCCCGCTCAGCGTCCTTCATGTGCGGAAAAGCCTCCTaGACTCACAGTGGAAGAGTTTCAGGTTCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: SRSASFMCGKAS*THSGRVSGSVA
Trigger: AGCAACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCACATGAAGGACGCTGAGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CAA 90 bp AAACCCAACAGCAAGTGTCCTTATAAGAGAAATGCAGAAGGAGATTaGAGACAGGAGACAGGAGCTGCCATGCGAGGATGGAGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: KPNSKCPYKRNAEGD*RQETGAAMRGWRRW
Trigger: CCACCGCCTCCATCCTCGCATGGCAGCTCCTGTCTCCTGTCTCAAATCTCCTTCTGCATTTCTCTTATAAGGACACTTGCTGTTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS TCA 72 bp CTGTTTGGGTCCACATGTAATTTCTCCGTGTGTAACTaGACCGTAGGTGATATTTCACCGCCAGCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LFGSTCNFSVCN*TVGDISPPAAG
Trigger: CCCTGCCGCTGGCGGTGAAATATCACCTACGGTTCAGTTACACACGGAGAAATTACATGTGGACCCAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CCA 72 bp GTCCTTCATGTGCGGAAAAGCCTCCTTGACTCACAGTaGAAGAGTTTCAGGTTCAGTTGCTCAGCTCCACAC +
Preference number: 6 (lower is better)
Translates to: VLHVRKSLLDSQ*KSFRFSCSAPH
Trigger: GTGTGGAGCTGAGCAACTGAACCTGAAACTCTTCCACTGTGAGTCAAGGAGGCTTTTCCGCACATGAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301732.10
ENST00000382381.7
ENST00000563623.5
ENST00000567910.1
CDS CAA 72 bp TCCAAGTTCTGTCCCCCTGGACCTGGGGTTGTGATCTaGCTTAGAAACAGGGTCTTTGAATATGTGATTAGT +
Preference number: 6 (lower is better)
Translates to: SKFCPPGPGVVI*LRNRVFEYVIS
Trigger: ACTAATCACATATTCAAAGACCCTGTTTCTAAGCAAGATCACAACCCCAGGTCCAGGGGGACAGAACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569062.1
CDS CCA 72 bp GAATATGTGATTAGTAAGGATCTTAAGGTGAGACACTaGATTAGTGTGGGCCTTAAACCCAACAGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: EYVISKDLKVRH*ISVGLKPNSKC
Trigger: ACACTTGCTGTTGGGTTTAAGGCCCACACTAATCCAGTGTCTCACCTTAAGATCCTTACTAATCACATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569062.1