RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000107331

Ensembl transcript IDs: ENST00000265662.9, ENST00000341511.11, ENST00000371605.7, ENST00000398207.8, ENST00000437791.2, ENST00000459850.5, ENST00000463603.5, ENST00000464157.1, ENST00000464520.1, ENST00000464876.5, ENST00000466707.1, ENST00000470535.2, ENST00000476211.5, ENST00000479446.5, ENST00000487109.5, ENST00000488535.2, ENST00000490486.2, ENST00000492260.5, ENST00000494046.5, ENST00000614293.4, ENST00000625103.1

Found 2748 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCACCCACCCCCGACGGCAGCCGGAACGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGATAGCCGCAGCCGGTACTCGCGGCGC +
Preference number: 1 (lower is better)
Translates to: VAPTPDGSRNVLTSC*GLASGDSRSRYSRR
Trigger: GCGCCGCGAGTACCGGCTGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGTCGGGGGTGGGTGCCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp CAGGTGGCACCCACCCCCGACGGCAGCCGGAACGTGCTCACGAGCTaGTGGGGGCTGGCGTCGGGCGATAGCCGCAGCCGGTACTCGCGG +
Preference number: 1 (lower is better)
Translates to: QVAPTPDGSRNVLTS*WGLASGDSRSRYSR
Trigger: CCGCGAGTACCGGCTGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGTCGGGGGTGGGTGCCACCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp CCACACTGCTGGGGCAGGAGAAGCCGGTGCCCTGCGCAGAGCAGGTaGAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCG +
Preference number: 1 (lower is better)
Translates to: PHCWGRRSRCPAQSR*SGRAPVPGAAGRVP
Trigger: CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCCCCAGCAGTGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp CCACCCCCGACGGCAGCCGGAACGTGCTCACGAGCTGCTGGGGGCTaGCGTCGGGCGATAGCCGCAGCCGGTACTCGCGGCGCTCCTCGT +
Preference number: 1 (lower is better)
Translates to: PPPTAAGTCSRAAGG*RRAIAAAGTRGAPR
Trigger: ACGAGGAGCGCCGCGAGTACCGGCTGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGTCGGGGGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp GCCTGCGACTGGGTCAGCTCCGAGCACCGGGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGGCCCTCCGCCCCAGGGAGCACATCC +
Preference number: 1 (lower is better)
Translates to: ACDWVSSEHRARLPA*PSPDAGPSAPGSTS
Trigger: GGATGTGCTCCCTGGGGCGGAGGGCCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGCCCGGTGCTCGGAGCTGACCCAGTCGCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp GCAGCGATGCCTGCGACTGGGTCAGCTCCGAGCACCGGGCCAGATTaGCAGCGTGACCCTCCCCAGACGCCGGGCCCTCCGCCCCAGGGA +
Preference number: 1 (lower is better)
Translates to: AAMPATGSAPSTGPD*QRDPPQTPGPPPQG
Trigger: TCCCTGGGGCGGAGGGCCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGCCCGGTGCTCGGAGCTGACCCAGTCGCAGGCATCGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp GCCCTCGTCCTCCGTGTCCAGGTCCTCGGGCTCGTCTGCCACAAGTaGCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: ALVLRVQVLGLVCHK*PELRGGRPGPEQAE
Trigger: CTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAGCCCGAGGACCTGGACACGGAGGACGAGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR GCA 90 bp GCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCTTaGGGCTGCCCTGGCCGACCCTCGACAGGGCCTCTGCCTCCACCT +
Preference number: 1 (lower is better)
Translates to: AARGTGAPSATRRPA*GCPGRPSTGPLPPP
Trigger: AGGTGGAGGCAGAGGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp TGCTCAGGTTCAACGTGGGCCCCAGCGAGCCGTTGGCGGGAGACTTaGGCACGCAGGTGGCACCCACCCCCGACGGCAGCCGGAACGTGC +
Preference number: 1 (lower is better)
Translates to: CSGSTWAPASRWRET*ARRWHPPPTAAGTC
Trigger: GCACGTTCCGGCTGCCGTCGGGGGTGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp CCAGCTCCCTCGTCGCCACGGGCAGAGCCCACAGATGACGCCGACTaGAGCGATGCCTGCGACTGGGTCAGCTCCGAGCACCGGGCCAGA +
Preference number: 1 (lower is better)
Translates to: PAPSSPRAEPTDDAD*SDACDWVSSEHRAR
Trigger: TCTGGCCCGGTGCTCGGAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCCCGTGGCGACGAGGGAGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp CGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACAGGGCCTCTGCCTCCACCTCTTGCA +
Preference number: 1 (lower is better)
Translates to: RGTGAPSATRRPACG*PGRPSTGPLPPPLA
Trigger: TGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp ATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTaGCCGCCCACACTGCTGGGGCAGGAGAAGCCGGTGCCCTGCGCA +
Preference number: 1 (lower is better)
Translates to: MSVRMSPVTTRIWGG*PPTLLGQEKPVPCA
Trigger: TGCGCAGGGCACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp AACTGGCGCACCTTCAGCCACCCGCCGTCCAGCTTGCGGCTGCCCTaGCCGACCCTCGACAGGGCCTCTGCCTCCACCTCTTGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: NWRTFSHPPSSLRLP*PTLDRASASTSCRL
Trigger: CAGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp TTGCGGCGGGCGCAGTGGAAGCGTTTGACCAGCAGCCCGTGGAACTaGCGCACCTTCAGCCACCCGCCGTCCAGCTTGCGGCTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: LRRAQWKRLTSSPWN*RTFSHPPSSLRLPW
Trigger: CCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp TGGCCGGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTaGGGCGGGTGCCCGCCCACACTGCTGGGGCAGGAGAAGCCGGTG +
Preference number: 1 (lower is better)
Translates to: WPVMSVRMSPVTTRI*GGCPPTLLGQEKPV
Trigger: CACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp CGGGCCTCGTCCTTCCAGGAGATCCCACGCAGCCGCGTGTACAGCTaGAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCGCGTCACAC +
Preference number: 1 (lower is better)
Translates to: RASSFQEIPRSRVYS*RCSRAVSSSNSASH
Trigger: GTGTGACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCGTGGGATCTCCTGGAAGGACGAGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR GCA 90 bp GCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGAGAGGGGACTaGAGTGCGGATGGCGGCTCCGTCTCCTGCTGCTCCAGGTTGTCA +
Preference number: 1 (lower is better)
Translates to: ADRGRSRLSKQPRGD*SADGGSVSCCSRLS
Trigger: TGACAACCTGGAGCAGCAGGAGACGGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR TCA 90 bp GTCGGTGTAGCCAGCTCCCTCGTCGCCACGGGCAGAGCCCACAGATaGCGCCGACTGCAGCGATGCCTGCGACTGGGTCAGCTCCGAGCA +
Preference number: 1 (lower is better)
Translates to: VGVASSLVATGRAHR*RRLQRCLRLGQLRA
Trigger: TGCTCGGAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCCCGTGGCGACGAGGGAGCTGGCTACACCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp GAGAGAAAAGCTGGTTCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTaGCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: ERKAGSEAGQEKGQQ*LVQPASPWAVSSAR
Trigger: CCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGAACCAGCTTTTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR GCA 90 bp ACATGCTGTCGAAGAACCGAGCCGCCAGCAGGCGCGACTCCCCGCTaGTCAGGTTCAACGTGGGCCCCAGCGAGCCGTTGGCGGGAGACT +
Preference number: 1 (lower is better)
Translates to: TCCRRTEPPAGATPR*SGSTWAPASRWRET
Trigger: AGTCTCCCGCCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCAGCGGGGAGTCGCGCCTGCTGGCGGCTCGGTTCTTCGACAGCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp TCGTCCTTCCAGGAGATCCCACGCAGCCGCGTGTACAGCTGCAGGTaGTCCCGGGCCGTGAGCTCGTCGAACAGCGCGTCACACTGCGGG +
Preference number: 1 (lower is better)
Translates to: SSFQEIPRSRVYSCR*SRAVSSSNSASHCG
Trigger: CCCGCAGTGTGACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCGTGGGATCTCCTGGAAGGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 90 bp TTGGAGTTGCGGCGGGCGCAGTGGAAGCGTTTGACCAGCAGCCCGTaGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCTTGCGGCTG +
Preference number: 1 (lower is better)
Translates to: LELRRAQWKRLTSSP*NWRTFSHPPSSLRL
Trigger: CAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp GGGAGAAGAGTGCCTTGGAGTTGCGGCGGGCGCAGTGGAAGCGTTTaGCCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGT +
Preference number: 1 (lower is better)
Translates to: GRRVPWSCGGRSGSV*PAARGTGAPSATRR
Trigger: ACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp GCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGAGTCCCTaGCCCAGCTCTGGGTGGTCAGTGGAGCGTGTCCTCCCTGGCCCA +
Preference number: 1 (lower is better)
Translates to: ALAGTGGLLSPLLSP*PSSGWSVERVLPGP
Trigger: TGGGCCAGGGAGGACACGCTCCACTGACCACCCAGAGCTGGGCCAGGGACTCAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR TCA 90 bp CACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTaGGTCCCTGGCCCAGCTCTGGGTGGTCAGTGGAGCGTGTCCTCC +
Preference number: 1 (lower is better)
Translates to: HSRPWQALGDFCPHC*VPGPALGGQWSVSS
Trigger: GGAGGACACGCTCCACTGACCACCCAGAGCTGGGCCAGGGACTCAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR GCA 90 bp AGGGCCGGCGGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGGTaGAGCCGCAGCTCTGCTACATACTGCTGCAGCCAGCGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: RAGGSSSSDRFSASG*SRSSATYCCSQRRC
Trigger: ACACCTGCGCTGGCTGCAGCAGTATGTAGCAGAGCTGCGGCTGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR CCA 90 bp GGCTGCGCTCCAGGTGCTGGAAGAGGCGCTCGAAAGCCCCCTTCTTaGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCCGTGCTTGTGT +
Preference number: 1 (lower is better)
Translates to: GCAPGAGRGARKPPS*RPRWAGCRRAPCLC
Trigger: ACACAAGCACGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGAAGGGGGCTTTCGAGCGCCTCTTCCAGCACCTGGAGCGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp CGGGACGGACAGGGCCACGGTCATGGCCACGCAGACGAAGAAGGCTaGCAGCAAGATCTGGGAGAAGAGTGCCTTGGAGTTGCGGCGGGC +
Preference number: 1 (lower is better)
Translates to: RDGQGHGHGHADEEG*QQDLGEECLGVAAG
Trigger: GCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGTCTGCGTGGCCATGACCGTGGCCCTGTCCGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp TGCTTGTGTCTGAGACCAGCAGGCAGGAGGCCACATGCTTGCGGATaGACTGGGACACCTGGAGCTCGGAGCAGCTGCTCAGCGGGGCCC +
Preference number: 1 (lower is better)
Translates to: CLCLRPAGRRPHACG*TGTPGARSSCSAGP
Trigger: GGGCCCCGCTGAGCAGCTGCTCCGAGCTCCAGGTGTCCCAGTTCATCCGCAAGCATGTGGCCTCCTGCCTGCTGGTCTCAGACACAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp CCCCCTTCTTGGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCCGTaGTTGTGTCTGAGACCAGCAGGCAGGAGGCCACATGCTTGCGGA +
Preference number: 1 (lower is better)
Translates to: PPSWRPRWAGCRRAP*LCLRPAGRRPHACG
Trigger: TCCGCAAGCATGTGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp GAGCCCGCAGGCGCGTACAGGATTTTGGGGTTGCTGGTCATGAGGTaGACGAGGAGGCCCAGGTTCCGCTGCTCCTTGCTCGTGAAGCCC +
Preference number: 1 (lower is better)
Translates to: EPAGAYRILGLLVMR*TRRPRFRCSLLVKP
Trigger: GGGCTTCACGAGCAAGGAGCAGCGGAACCTGGGCCTCCTCGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCGCCTGCGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR GCA 90 bp AGCCGCAGCTCTGCTACATACTGCTGCAGCCAGCGCAGGTGTTGCTaGAGCCTGCCCTGCTCCAGGAAGCTGCGGATCTCCGCCGAGATG +
Preference number: 1 (lower is better)
Translates to: SRSSATYCCSQRRCC*SLPCSRKLRISAEM
Trigger: CATCTCGGCGGAGATCCGCAGCTTCCTGGAGCAGGGCAGGCTGCAGCAACACCTGCGCTGGCTGCAGCAGTATGTAGCAGAGCTGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR CCA 90 bp GGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTaGTGCCAAATGAGGCTGGGATGGACTTCAGGACGTTTCCAAAGG +
Preference number: 1 (lower is better)
Translates to: GQPCAPRSSAPWVGP*CQMRLGWTSGRFQR
Trigger: CCTTTGGAAACGTCCTGAAGTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp CCGGAGCAGGCTGAGCAAGCAGCCGAGAGGGGACTGCAGTGCGGATaGCGGCTCCGTCTCCTGCTGCTCCAGGTTGTCACTCTGCTTCTT +
Preference number: 1 (lower is better)
Translates to: PEQAEQAAERGLQCG*RLRLLLLQVVTLLL
Trigger: AAGAAGCAGAGTGACAACCTGGAGCAGCAGGAGACGGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTGCTTGCTCAGCCTGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR TCA 90 bp GGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCCGTGCTTGTGTCTaGGACCAGCAGGCAGGAGGCCACATGCTTGCGGATGAACTGGGA +
Preference number: 1 (lower is better)
Translates to: GGLAGQDVGELRACV*DQQAGGHMLADELG
Trigger: TCCCAGTTCATCCGCAAGCATGTGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp GCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATaGGGCTGGGATGGACTTCAGGACGTTTCCAAAGGTGATGGCCCC +
Preference number: 1 (lower is better)
Translates to: AHRDLPHHGWGPGAK*GWDGLQDVSKGDGP
Trigger: GGGGCCATCACCTTTGGAAACGTCCTGAAGTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp TTCCTCCAGGGTCGTGTCCATCAGCCCGAAGCTGCTGAGGTGCAGTaGATCCAGGCTGCGCTCCAGGTGCTGGAAGAGGCGCTCGAAAGC +
Preference number: 1 (lower is better)
Translates to: FLQGRVHQPEAAEVQ*IQAALQVLEEALES
Trigger: GCTTTCGAGCGCCTCTTCCAGCACCTGGAGCGCAGCCTGGATGCACTGCACCTCAGCAGCTTCGGGCTGATGGACACGACCCTGGAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp GGTGCTGGAAGAGGCGCTCGAAAGCCCCCTTCTTGGCGGCCTCGCTaGGCAGGATGTAGGAGAGCTCCGTGCTTGTGTCTGAGACCAGCA +
Preference number: 1 (lower is better)
Translates to: GAGRGARKPPSWRPR*AGCRRAPCLCLRPA
Trigger: TGCTGGTCTCAGACACAAGCACGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGAAGGGGGCTTTCGAGCGCCTCTTCCAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp GCCACGGTCATGGCCACGCAGACGAAGAAGGCTGGCAGCAAGATCTaGGAGAAGAGTGCCTTGGAGTTGCGGCGGGCGCAGTGGAAGCGT +
Preference number: 1 (lower is better)
Translates to: ATVMATQTKKAGSKI*EKSALELRRAQWKR
Trigger: ACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGTCTGCGTGGCCATGACCGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp GCGGGGGCAGATCACCAATCTCCGGGACGGACAGGGCCACGGTCATaGCCACGCAGACGAAGAAGGCTGGCAGCAAGATCTGGGAGAAGA +
Preference number: 1 (lower is better)
Translates to: AGADHQSPGRTGPRS*PRRRRRLAARSGRR
Trigger: TCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGTCTGCGTGGCCATGACCGTGGCCCTGTCCGTCCCGGAGATTGGTGATCTGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp ATAGCCGCAGCCGGTACTCGCGGCGCTCCTCGTTGGCGTAGGGGATaGAATTGCCACGGGGCTGGGTGTAGTTGTGGTACTGGGAAGGTG +
Preference number: 1 (lower is better)
Translates to: IAAAGTRGAPRWRRG*NCHGAGCSCGTGKV
Trigger: CACCTTCCCAGTACCACAACTACACCCAGCCCCGTGGCAATTTCATCCCCTACGCCAACGAGGAGCGCCGCGAGTACCGGCTGCGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp GGAAGCCCACGACGCCCTCAACCGCCATGGCCACCAGTCCGCGGGTaGCAATGTCCCACTCGAACGGGGACTTCATCTTGTCAAACTGGC +
Preference number: 1 (lower is better)
Translates to: GSPRRPQPPWPPVRG*QCPTRTGTSSCQTG
Trigger: GCCAGTTTGACAAGATGAAGTCCCCGTTCGAGTGGGACATTGTCACCCGCGGACTGGTGGCCATGGCGGTTGAGGGCGTCGTGGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp CAGCGAGAAGTTGTCCTGTCTCAGGGCCGGCGGCAGCTCATCCAGTaGCAGGTTCAGTGCCTCGGGGTGCAGCCGCAGCTCTGCTACATA +
Preference number: 1 (lower is better)
Translates to: QREVVLSQGRRQLIQ*QVQCLGVQPQLCYI
Trigger: TATGTAGCAGAGCTGCGGCTGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCCTGAGACAGGACAACTTCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR GCA 90 bp GAGAGCTCCGTGCTTGTGTCTGAGACCAGCAGGCAGGAGGCCACATaGTTGCGGATGAACTGGGACACCTGGAGCTCGGAGCAGCTGCTC +
Preference number: 1 (lower is better)
Translates to: ESSVLVSETSRQEAT*LRMNWDTWSSEQLL
Trigger: GAGCAGCTGCTCCGAGCTCCAGGTGTCCCAGTTCATCCGCAAGCATGTGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp GGCCACGCAGACGAAGAAGGCTGGCAGCAAGATCTGGGAGAAGAGTaGCTTGGAGTTGCGGCGGGCGCAGTGGAAGCGTTTGACCAGCAG +
Preference number: 1 (lower is better)
Translates to: GHADEEGWQQDLGEE*LGVAAGAVEAFDQQ
Trigger: CTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGTCTGCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp AGCAAGATCTGGGAGAAGAGTGCCTTGGAGTTGCGGCGGGCGCAGTaGAAGCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGC +
Preference number: 1 (lower is better)
Translates to: SKIWEKSALELRRAQ*KRLTSSPWNWRTFS
Trigger: GCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATCTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp TGTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATaGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGACTTCAGGA +
Preference number: 1 (lower is better)
Translates to: CRKPGQPCAPRSSAP*VGPWCQMRLGWTSG
Trigger: TCCTGAAGTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp TTGGTAGACACAGGCATGCGCTGTGGCCGCCGCAGGAAGTTGTACTaGCACATGATGGTCAGGAGGAAGCCCACGACGCCCTCAACCGCC +
Preference number: 1 (lower is better)
Translates to: LVDTGMRCGRRRKLY*HMMVRRKPTTPSTA
Trigger: GGCGGTTGAGGGCGTCGTGGGCTTCCTCCTGACCATCATGTGCCAGTACAACTTCCTGCGGCGGCCACAGCGCATGCCTGTGTCTACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp AACTGGATCCAGCCGCAGGCCGCGTTGTCAATGGTATCCAGCTGCTaGAGGAGGGCCATGCCACTGGGCAGCGAGAAGTTGTCCTGTCTC +
Preference number: 1 (lower is better)
Translates to: NWIQPQAALSMVSSC*RRAMPLGSEKLSCL
Trigger: GAGACAGGACAACTTCTCGCTGCCCAGTGGCATGGCCCTCCTGCAGCAGCTGGATACCATTGACAACGCGGCCTGCGGCTGGATCCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR CCA 90 bp CACAGCCCGCTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTaGTTCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCA +
Preference number: 1 (lower is better)
Translates to: HSPLSASAFIVREKS*FRGRAGERPAVPGP
Trigger: TGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAGCGGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR TCA 90 bp GATGAAATTGCCACGGGGCTGGGTGTAGTTGTGGTACTGGGAAGGTaGCAGGACCAGCGGGGGCAGATCACCAATCTCCGGGACGGACAG +
Preference number: 1 (lower is better)
Translates to: DEIATGLGVVVVLGR*QDQRGQITNLRDGQ
Trigger: CTGTCCGTCCCGGAGATTGGTGATCTGCCCCCGCTGGTCCTGTCACCTTCCCAGTACCACAACTACACCCAGCCCCGTGGCAATTTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp GCAGCCTGCCCTGCTCCAGGAAGCTGCGGATCTCCGCCGAGATGTTaGGCCAGACCTGGGCATAGTGAGTCACGTTGCCCACAAAAGCAA +
Preference number: 1 (lower is better)
Translates to: AACPAPGSCGSPPRC*ARPGHSESRCPQKQ
Trigger: TTGCTTTTGTGGGCAACGTGACTCACTATGCCCAGGTCTGGCTCAACATCTCGGCGGAGATCCGCAGCTTCCTGGAGCAGGGCAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR GCA 90 bp CCAGACACCTGCTCCATCTTGCTGAACACCTGGGCCAGCGAGATGTaGTCCGACTTGAGCTGGTACTGCACCTTTGTGTGGTGCCGCTCC +
Preference number: 1 (lower is better)
Translates to: PDTCSILLNTWASEM*SDLSWYCTFVWCRS
Trigger: GGAGCGGCACCACACAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCAGGTGTTCAGCAAGATGGAGCAGGTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR GCA 90 bp AAGCAGCCGAGAGGGGACTGCAGTGCGGATGGCGGCTCCGTCTCCTaGTGCTCCAGGTTGTCACTCTGCTTCTTGGCAAAGTTCACGAAC +
Preference number: 1 (lower is better)
Translates to: KQPRGDCSADGGSVS*CSRLSLCFLAKFTN
Trigger: GTTCGTGAACTTTGCCAAGAAGCAGAGTGACAACCTGGAGCAGCAGGAGACGGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR GCA 90 bp ATGAACTGGATCCAGCCGCAGGCCGCGTTGTCAATGGTATCCAGCTaGTGCAGGAGGGCCATGCCACTGGGCAGCGAGAAGTTGTCCTGT +
Preference number: 1 (lower is better)
Translates to: MNWIQPQAALSMVSS*CRRAMPLGSEKLSC
Trigger: ACAGGACAACTTCTCGCTGCCCAGTGGCATGGCCCTCCTGCAGCAGCTGGATACCATTGACAACGCGGCCTGCGGCTGGATCCAGTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR CCA 90 bp AGTCGGAAGCGGTCGGAGGTGAAGAGCAGGTACTCAGAGACATTGTaGCCGGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATC +
Preference number: 1 (lower is better)
Translates to: SRKRSEVKSRYSETL*PVMSVRMSPVTTRI
Trigger: GATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACCGGCCACAATGTCTCTGAGTACCTGCTCTTCACCTCCGACCGCTTCCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp CAGAGGTGTTCCTCCACCGTGAGCCGGTCAAAGAGCACATTGTGCTaGGGGCACATGCCCAGGTTCTTGCGGATCTCATCCATCTCCGTG +
Preference number: 1 (lower is better)
Translates to: QRCSSTVSRSKSTLC*GHMPRFLRISSISV
Trigger: CACGGAGATGGATGAGATCCGCAAGAACCTGGGCATGTGCCCGCAGCACAATGTGCTCTTTGACCGGCTCACGGTGGAGGAACACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp TCAATCTTGACCATGTCATTGTCGGCGTCTCCCCGGAGCACTCGCTaGCGCTCACTGGCCACGTCCACATCATCCTCCACAGGCTTGGTA +
Preference number: 1 (lower is better)
Translates to: SILTMSLSASPRSTR*RSLATSTSSSTGLV
Trigger: TACCAAGCCTGTGGAGGATGATGTGGACGTGGCCAGTGAGCGGCAGCGAGTGCTCCGGGGAGACGCCGACAATGACATGGTCAAGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp TCGATGCCCAGCACGCCAGACACCTGCTCCATCTTGCTGAACACCTaGGCCAGCGAGATGTGCTCCGACTTGAGCTGGTACTGCACCTTT +
Preference number: 1 (lower is better)
Translates to: SMPSTPDTCSILLNT*ASEMCSDLSWYCTF
Trigger: AAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCAGGTGTTCAGCAAGATGGAGCAGGTGTCTGGCGTGCTGGGCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR TCA 90 bp GTCCATCTCTCTGCGGATCTCCTCCTGAGCCATGCTCTTGAGCCGTaGGTAGAACCAGAGGTGTTCCTCCACCGTGAGCCGGTCAAAGAG +
Preference number: 1 (lower is better)
Translates to: VHLSADLLLSHALEP*VEPEVFLHREPVKE
Trigger: CTCTTTGACCGGCTCACGGTGGAGGAACACCTCTGGTTCTACTCACGGCTCAAGAGCATGGCTCAGGAGGAGATCCGCAGAGAGATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp ACCGCACCACGTCCTTCACACTCTGGCTGCTCTTGGTCCGCACCGTaGTCATGTAGCCATCTCCAAACCGGTTCTTCAGGTGCTGGATGC +
Preference number: 1 (lower is better)
Translates to: TAPRPSHSGCSWSAP*SCSHLQTGSSGAGC
Trigger: GCATCCAGCACCTGAAGAACCGGTTTGGAGATGGCTACATGATCACGGTGCGGACCAAGAGCAGCCAGAGTGTGAAGGACGTGGTGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR GCA 90 bp AACCAGAGGTGTTCCTCCACCGTGAGCCGGTCAAAGAGCACATTGTaGTGCGGGCACATGCCCAGGTTCTTGCGGATCTCATCCATCTCC +
Preference number: 1 (lower is better)
Translates to: NQRCSSTVSRSKSTL*CGHMPRFLRISSIS
Trigger: GGAGATGGATGAGATCCGCAAGAACCTGGGCATGTGCCCGCAGCACAATGTGCTCTTTGACCGGCTCACGGTGGAGGAACACCTCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp ATCTTGCTGAACACCTGGGCCAGCGAGATGTGCTCCGACTTGAGCTaGTACTGCACCTTTGTGTGGTGCCGCTCCTTGAGCATGGCTTCC +
Preference number: 1 (lower is better)
Translates to: ILLNTWASEMCSDLS*YCTFVWCRSLSMAS
Trigger: GGAAGCCATGCTCAAGGAGCGGCACCACACAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCAGGTGTTCAGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR TCA 90 bp TCAGCTTGTTCAGGGCCAGCTTCTTGTCGTCCTTGTAGACCTTGGTaGGTTTGTCCACGCAGACAACCAGAGGCAGGTGGGTGGGCTCCT +
Preference number: 1 (lower is better)
Translates to: SACSGPASCRPCRPW*VCPRRQPEAGGWAP
Trigger: AGGAGCCCACCCACCTGCCTCTGGTTGTCTGCGTGGACAAACTCACCAAGGTCTACAAGGACGACAAGAAGCTGGCCCTGAACAAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 90 bp CACGGACAGCTTGCGCTTCATGCCACCCGACAATGTCTGCACCAGTaGGTGCCGTTTGTTGGAGAGCTCCAGGTCCTCGATCATCTTGTC +
Preference number: 1 (lower is better)
Translates to: HGQLALHATRQCLHQ*VPFVGELQVLDHLV
Trigger: GACAAGATGATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGCGCAAGCTGTCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 90 bp AGTGCGGATGGCGGCTCCGTCTCCTGCTGCTCCAGGTTGTCACTCTaGTTCTTGGCAAAGTTCACGAACACATTGTCCAGTGTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: SADGGSVSCCSRLSL*FLAKFTNTLSSVVW
Trigger: CCAGACCACACTGGACAATGTGTTCGTGAACTTTGCCAAGAAGCAGAGTGACAACCTGGAGCAGCAGGAGACGGAGCCGCCATCCGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR GCA 90 bp GACAGCTTGCGCTTCATGCCACCCGACAATGTCTGCACCAGTGAGTaGCGTTTGTTGGAGAGCTCCAGGTCCTCGATCATCTTGTCCATC +
Preference number: 1 (lower is better)
Translates to: DSLRFMPPDNVCTSE*RLLESSRSSIILSI
Trigger: GATGGACAAGATGATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGCGCAAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 90 bp GCTTCATGCCACCCGACAATGTCTGCACCAGTGAGTGCCGTTTGTTaGAGAGCTCCAGGTCCTCGATCATCTTGTCCATCTCTCTGCGGA +
Preference number: 1 (lower is better)
Translates to: ASCHPTMSAPVSAVC*RAPGPRSSCPSLCG
Trigger: TCCGCAGAGAGATGGACAAGATGATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 90 bp AGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCTaGCGGCTGCCCTGGCCGACCCTCGACAGGGCCTCTGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: SSPWNWRTFSHPPSS*RLPWPTLDRASAST
Trigger: GGTGGAGGCAGAGGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGGGAGCTCGGAGCAGCTaGTCAGCGGGGCCCGACCTG +
Preference number: 2 (lower is better)
Translates to: TSARSSVGADRGRSRLSKGARSS*SAGPDL
Trigger: CAGGTCGGGCCCCGCTGAGCAGCTGCTCCGAGCTCC...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp CGCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCTTGGGCGGTGAGCAGTaGCAGGCAGGGGCGAGGGGC +
Preference number: 2 (lower is better)
Translates to: RSRVYSCRCSRAVSSSNSLGGEQ*QAGARG
Trigger: GCCCCTCGCCCCTGCCTGGCACTGCTCACCGCCCAA...GCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGGCCCTGGCAGGCACTaGGGGACTTCTGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAGPGRH*GTSVPI
Trigger: AATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGCCGAGTACAGGGGCTaGAGGACCAGAAGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAAEYRG*RTRSPL
Trigger: CAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR CAA 90 bp CTGCTCAGGTTCAACGTGGGCCCCAGCGAGCCGTTGGCGGGAGACTaGAGCACGCAGGTGGCACCCACCCCCGACGGCAGCCGGAACGTG +
Preference number: 2 (lower is better)
Translates to: LLRFNVGPSEPLAGD*STQVAPTPDGSRNV
Trigger: CACGTTCCGGCTGCCGTCGGGGGTGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp GTCCAGGTCCTCGGGCTCGTCTGCCACAAGTGCCCGGAGCTCCGTGGGGGCAGACGCCATAGGTGCCCTTaGGGAAGAGCGGGGAGCCGC +
Preference number: 2 (lower is better)
Translates to: VQVLGLVCHKCPELRGGRRHRCP*GRAGSR
Trigger: GCGGCTCCCCGCTCTTCCTCAAGGGCACCTATGGCG...TCTGCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAGCCCGAGGACCTGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACCGCCGACTGCAGCGATaGCTGCGACTGGGTCAGCTC +
Preference number: 2 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHRRLQR*LRLGQL
Trigger: GAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCG...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAACTCCACTCCAGGCCCTaGCAGGCACTGGGGGACTTC +
Preference number: 2 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQLHSRP*QALGDF
Trigger: GAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAG...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCCAGCCGGCGTCGCCTTaGGCGGTGAGCAGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATQPASP*AVSSAR
Trigger: CCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTG...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTAAGGCCAGCAGTGCCTaGTCCAGCCGGCGTCGCCTT +
Preference number: 2 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLKASSA*SSRRRL
Trigger: AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTT...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCAGCCGGCGTCGCCTTaGGCGGTGAGCAGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSQPASP*AVSSAR
Trigger: CCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTG...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR GCA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGAGCACCGGGCCAGATTaGCAGCGTGACCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQSTGPD*QRDPPQ
Trigger: CTGGGGAGGGTCACGCTGGCAATCTGGCCCGGTGCT...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp TACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCGCGTCACACTGCGGCGCGACTCCCCGCTaGTCAGGTTCAACGTGGGCC +
Preference number: 2 (lower is better)
Translates to: YSCRCSRAVSSSNSASHCGATPR*SGSTWA
Trigger: GGCCCACGTTGAACCTGAGCAGCGGGGAGTCGCGCC...GCAGTGTGACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp GTCCAGGTCCTCGGGCTCGTCTGCCACAAGTGCCCGGAGCTCCGTGGGGGCAGAGGCCCTGGCAGGCACTaGGGGACTTCTGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: VQVLGLVCHKCPELRGGRGPGRH*GTSVPI
Trigger: AATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCC...TCTGCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAGCCCGAGGACCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGGGGGGCCAAGCTGGGTaGGAGAGCGATGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGGGQAG*ESDGSW
Trigger: CCAGCTGCCATCGCTCTCCCACCCAGCTTGGCCCCC...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
68% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
3UTR CAA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTaGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGC +
Preference number: 2 (lower is better)
Translates to: GKAGQGCTQPGPGQP*AQLGAATAVTTGHG
Trigger: GCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR CAA 90 bp TGGGAGAAGAGTGCCTTGGAGTTGCGGCGGGCGCAGTGGAAGCGTTaGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCG +
Preference number: 2 (lower is better)
Translates to: WEKSALELRRAQWKR*TSSPWNWRTFSHPP
Trigger: CGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp ATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCGTCGCCTTGGGCGGTaGGCAGTGCCAGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: INTGLTQLRPQPALGISLRRLGR*AVPGRG
Trigger: GCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACG...AAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGGCCCTGGCAGGCACTaGGGGACTTCTGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATGPGRH*GTSVPI
Trigger: AATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCC...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCTCCACTCCAGGCCCTaGCAGGCACTGGGGGACTTC +
Preference number: 2 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSLHSRP*QALGDF
Trigger: GAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAG...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR CAA 90 bp CCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTaGAGTCCCTGGCCCAGCTCTGGGTGGTCAGTGGAGCGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: PLQALAGTGGLLSPL*SPWPSSGWSVERVL
Trigger: GAGGACACGCTCCACTGACCACCCAGAGCTGGGCCAGGGACTCAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR CAA 90 bp ACGCGGTCGACCTCAGAGCCCGCAGGCGCGTACAGGATTTTGGGGTaGCTGGTCATGAGGTGCACGAGGAGGCCCAGGTTCCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: TRSTSEPAGAYRILG*LVMRCTRRPRFRCS
Trigger: GGAGCAGCGGAACCTGGGCCTCCTCGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCGCCTGCGGGCTCTGAGGTCGACCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR TCA 90 bp CTCCCTCGTCGCCACGGGCAGAGCCCACAGATGACGCCGACTGCAGCGATGCCTGCTTGTACTTCAGGATaGGGTCCCAGATGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: LPRRHGQSPQMTPTAAMPACTSG*GPRWRG
Trigger: GCCGCGCCATCTGGGACCTCATCCTGAAGTACAAGC...AGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCCCGTGGCGACGAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGTCTCATCCATCTCCGTaGGGATGTCGTGCCCGTAGA +
Preference number: 2 (lower is better)
Translates to: TSARSSVGADRGRSRLSKSHPSP*GCRARR
Trigger: TCTACGGGCACGACATCCGCACGGAGATGGATGAGA...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGGTCTGCACCAGTGAGTaGCGTTTGTTGGAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: TSARSSVGADRGRSRLSKVCTSE*RLLESS
Trigger: GGAGCTCTCCAACAAACGGCACTCACTGGTGCAGAC...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACACCGAAGCTGCTGAGGTaGAGTGCATCCAGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: RQSRARVYAARAGSAFGTPKLLR*SASRLR
Trigger: GCGCAGCCTGGATGCACTGCACCTCAGCAGCTTCGG...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp GTCTCAGGGCCGGCGGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGGTGCAGGTGTTGCTGCAGCCTaGCCTGCTCCAGGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: VSGPAAAHPVTGSVPRGAGVAAA*PAPGSC
Trigger: GCAGCTTCCTGGAGCAGGGCAGGCTGCAGCAACACC...TGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCCTGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR CCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAGGCCCTGGCAGGCACTaGGGGACTTCTGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: RQSRARVYAARAGSAFGTGPGRH*GTSVPI
Trigger: AATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCC...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCGCCGAGTACAGGGGCTaGAGGACCAGAAGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: EALRQSRARVYAARAGSAAEYRG*RTRSPL
Trigger: CAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGC...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp ATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCAGCCGGCGTCGCCTTaGGCGGTGAGCAGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: INTGLTQLRPQPALGISLQPASP*AVSSAR
Trigger: CCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTG...AAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTAAGGCCAGCAGTGCCTaGTCCAGCCGGCGTCGCCTT +
Preference number: 2 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLKASSA*SSRRRL
Trigger: AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTT...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTGTAAGAGAGAAAAGCTaGTTCCGAGGCCGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPVREKS*FRGRAG
Trigger: TCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTAC...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCTCTTGGCGGCCTCGCTaGGCAGGATGTAGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: GDVGQDVACDHPHLGRVPSWRPR*AGCRRA
Trigger: AGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGA...GGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCTTTCTGGCCCAGCGGTaGGCGGCAGGGAGACGTTCC +
Preference number: 2 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSFLAQR*AAGRRS
Trigger: GGAACGTCTCCCTGCCGCCCACCGCTGGGCCAGAAA...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 90 bp AGGATGACGCGGTCGACCTCAGAGCCCGCAGGCGCGTACAGGATTTaGGGGTTGCTGGTCATGAGGTGCACGAGGAGGCCCAGGTTCCGC +
Preference number: 2 (lower is better)
Translates to: RMTRSTSEPAGAYRI*GLLVMRCTRRPRFR
Trigger: GCGGAACCTGGGCCTCCTCGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCGCCTGCGGGCTCTGAGGTCGACCGCGTCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR TCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCACCAGCTGGCCCAAGCTaGTGGCTTCCCGCAGGACAG +
Preference number: 2 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSPAGPS*WLPAGQ
Trigger: CTGTCCTGCGGGAAGCCATCAGCTTGGGCCAGCTGG...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR TCA 90 bp CATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACCAGCTGGCCCAAGCTaGTGGCTTCCCGCAGGACAG +
Preference number: 2 (lower is better)
Translates to: HGRVQGLEDQKPLGPEPPPAGPS*WLPAGQ
Trigger: CTGTCCTGCGGGAAGCCATCAGCTTGGGCCAGCTGG...TGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR TCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAGGCCCTGGTGCCAAATaGGGCTGGGATGGACTTCAG +
Preference number: 2 (lower is better)
Translates to: RQSRARVYAARAGSAFGTGPGAK*GWDGLQ
Trigger: CTGAAGTCCATCCCAGCCTCATTTGGCACCAGGGCC...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp CCACTGGGCAGCGAGAAGTTGTCCTGTCTCAGGGCCGGCGGCAGCTCATCCAGTTGGGGTTGCTGGTCATaGGGTGCACGAGGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PLGSEKLSCLRAGGSSSSWGCWS*GARGGP
Trigger: TGGGCCTCCTCGTGCACCTCATGACCAGCAACCCCA...ACTGGATGAGCTGCCGCCGGCCCTGAGACAGGACAACTTCTCGCTGCCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR GCA 90 bp GAGACATTGTGGCCGGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCCGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACA +
Preference number: 2 (lower is better)
Translates to: ETLWPVMSVRMSPVTTRIRPACG*PGRPST
Trigger: TGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACG...GATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACCGGCCACAATGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp TCCAGCCGCAGGCCGCGTTGTCAATGGTATCCAGCTGCTGCAGGAGGGCCATGCAGGCCCAGGTTCCGCTaGTCCTTGCTCGTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: SSRRPRCQWYPAAAGGPCRPRFR*SLLVKP
Trigger: GGGCTTCACGAGCAAGGAGCAGCGGAACCTGGGCCT...GCATGGCCCTCCTGCAGCAGCTGGATACCATTGACAACGCGGCCTGCGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR CCA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCGGCCCTGGCAGGCACTaGGGGACTTCTGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSGPGRH*GTSVPI
Trigger: AATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCC...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTGCCGAGTACAGGGGCTaGAGGACCAGAAGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLAEYRG*RTRSPL
Trigger: CAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGC...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp CTGCGTACTTGGTCAGCTCCAGCTTCTCCAGAGCCCACTTCACCACCCGGGCCTGGCGGAACCCGACGTTaGAGGGAACAGGCCGGTCAG +
Preference number: 2 (lower is better)
Translates to: LRTWSAPASPEPTSPPGPGGTRR*REQAGQ
Trigger: CTGACCGGCCTGTTCCCTCCAACGTCGGGTTCCGCC...AGGCCCGGGTGGTGAAGTGGGCTCTGGAGAAGCTGGAGCTGACCAAGTACGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACCACGAAATTGGACAGTaGCAGCCCCTGTGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHHEIGQ*QPLCEG
Trigger: TCCTTCACACAGGGGCTGCCACTGTCCAATTTCGTG...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCAGAAGCCCCTTGGTCCTaGACCTCCACTCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSEAPWS*TSTPGP
Trigger: AGGGCCTGGAGTGGAGGTTCAGGACCAAGGGGCTTC...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR GCA 90 bp GCCTTCATCGTAAGAGAGAAAAGCTGGTTCCGAGGCCGGGCAGGAGAAAGGCCATTGGGCGGTGAGCAGTaGCAGGCAGGGGCGAGGGGC +
Preference number: 2 (lower is better)
Translates to: AFIVREKSWFRGRAGERPLGGEQ*QAGARG
Trigger: GCCCCTCGCCCCTGCCTGGCACTGCTCACCGCCCAA...TGGCCTTTCTCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCATTGTTGAGTCCCTaGCCCAGCTCTGGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSPLLSP*PSSGWS
Trigger: TGACCACCCAGAGCTGGGCCAGGGACTCAACAATGG...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACCATTGTTGAGTCCCTaGCCCAGCTCTGGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQPLLSP*PSSGWS
Trigger: TGACCACCCAGAGCTGGGCCAGGGACTCAACAATGG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGGTAAGAGAGAAAAGCTaGTTCCGAGGCCGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQVREKS*FRGRAG
Trigger: TCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTAC...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCAGGGAGAAGAGTGCCTTaGAGTTGCGGCGGGCGCAGT +
Preference number: 2 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSGRRVP*SCGGRS
Trigger: ACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCC...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 90 bp AGCTCCGTGCTTGTGTCTGAGACCAGCAGGCAGGAGGCCACATGCTaGCGGATGAACTGGGACACCTGGAGCTCGGAGCAGCTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: SSVLVSETSRQEATC*RMNWDTWSSEQLLS
Trigger: GCTGAGCAGCTGCTCCGAGCTCCAGGTGTCCCAGTTCATCCGCAAGCATGTGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp CGGGTGACAATGTCCCACTCGAACGGGGACTTCATCTTGTCAAACTGGCCAATCCGTCGCCTTGGGCGGTaGGCAGTGCCAGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RVTMSHSNGDFILSNWPIRRLGR*AVPGRG
Trigger: GCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACG...GATTGGCCAGTTTGACAAGATGAAGTCCCCGTTCGAGTGGGACATTGTCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCGGAAGCGGTCGGAGGTaGAGAGCAGGTACTCAGAGA +
Preference number: 2 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSGSGRR*RAGTQR
Trigger: TCTCTGAGTACCTGCTCTTCACCTCCGACCGCTTCC...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp CGCAGCTCTGCTACATACTGCTGCAGCCAGCGCAGGTGTTGCTGCAGCCTGCCCTCTCCGCCGAGATGTTaGGCCAGACCTGGGCATAGT +
Preference number: 2 (lower is better)
Translates to: RSSATYCCSQRRCCCSLPSPPRC*ARPGHS
Trigger: ACTATGCCCAGGTCTGGCTCAACATCTCGGCGGAGA...GGGCAGGCTGCAGCAACACCTGCGCTGGCTGCAGCAGTATGTAGCAGAGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR GCA 90 bp TTGAAGATGTCCACGCTCACCTTGGACATGAACTGGATCCAGCCGCAGGCCGCGCAGCGCAGGTGTTGCTaGAGCCTGCCCTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: LKMSTLTLDMNWIQPQAAQRRCC*SLPCSR
Trigger: CCTGGAGCAGGGCAGGCTGCAGCAACACCTGCGCTG...CGCGGCCTGCGGCTGGATCCAGTTCATGTCCAAGGTGAGCGTGGACATCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR GCA 90 bp CCTGTCTCAGGGCCGGCGGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGGTTCTGCTACATACTGCTaGAGCCAGCGCAGGTGTTGC +
Preference number: 2 (lower is better)
Translates to: PVSGPAAAHPVTGSVPRGSATYC*SQRRCC
Trigger: GCAACACCTGCGCTGGCTGCAGCAGTATGTAGCAGA...ACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCCTGAGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR GCA 90 bp CGCCCACAGCCCGCTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTACCTGGCCAGGAGCCTaGCCACTCAGCGGGGCATCC +
Preference number: 2 (lower is better)
Translates to: RPQPALGISLHRKREKLVTWPGA*PLSGAS
Trigger: GGATGCCCCGCTGAGTGGGCAGGCTCCTGGCCAGGT...AACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAGCGGGCTGTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479446.5
3UTR-3UTR CCA 90 bp CCGCTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTCCGAGGCCGGCTCCACTCCAGGCCCTaGCAGGCACTGGGGGACTTC +
Preference number: 2 (lower is better)
Translates to: PLSASAFIVREKSWFRGRLHSRP*QALGDF
Trigger: GAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAG...CCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp ATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTGCCGAGTACAGGGGCTaGAGGACCAGAAGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: INTGLTQLRPQPALGISLAEYRG*RTRSPL
Trigger: CAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGC...AAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp CGCCCACAGCCCGCTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTGGGGGCCAAGCTGGGTaGGAGAGCGATGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: RPQPALGISLHRKREKLVGGQAG*ESDGSW
Trigger: CCAGCTGCCATCGCTCTCCCACCCAGCTTGGCCCCC...AACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAGCGGGCTGTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp CGCCATGGCCACCAGTCCGCGGGTGACAATGTCCCACTCGAACGGGGACTTCATTCAGGATGGACATGGTaGTGGTCTTGCCCGCCCCGT +
Preference number: 2 (lower is better)
Translates to: RHGHQSAGDNVPLERGLHSGWTW*WSCPPR
Trigger: ACGGGGCGGGCAAGACCACCACCATGTCCATCCTGA...ATGAAGTCCCCGTTCGAGTGGGACATTGTCACCCGCGGACTGGTGGCCATGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp GCAGGATGTAGGAGAGCTCCGTGCTTGTGTCTGAGACCAGCAGGCAGGAGGCCACGGTCAGGATGGACATaGTGGTGGTCTTGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: AGCRRAPCLCLRPAGRRPRSGWT*WWSCPP
Trigger: GGGCGGGCAAGACCACCACCATGTCCATCCTGACCG...TGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCTCTCCTACATCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp GGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCAAGGATGGTGCGGCCTaGCTTGTACTTCAGGATGAG +
Preference number: 2 (lower is better)
Translates to: GDVGQDVACDHPHLGRVPKDGAA*LVLQDE
Trigger: CTCATCCTGAAGTACAAGCCAGGCCGCACCATCCTT...GGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCATGAACTGGGACACCTaGAGCTCGGAGCAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: LRQSRARVYAARAGSAFGMNWDT*SSEQLL
Trigger: GAGCAGCTGCTCCGAGCTCCAGGTGTCCCAGTTCAT...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGATTGTCTGGGTCCTGTaGGTTATCAAAGAGGGGGCG +
Preference number: 2 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQIVWVL*VIKEGA
Trigger: CGCCCCCTCTTTGATAACCCACAGGACCCAGACAAT...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCTGCTCTTGGGCAGGTTaGCACGCAGGATGGCGTTGT +
Preference number: 2 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSCSWAG*HAGWRC
Trigger: ACAACGCCATCCTGCGTGCCAACCTGCCCAAGAGCA...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 90 bp ACGAAGAAGGCTGGCAGCAAGATCTGGGAGAAGAGTGCCTTGGAGTaGCGGCGGGCGCAGTGGAAGCGTTTGACCAGCAGCCCGTGGAAC +
Preference number: 2 (lower is better)
Translates to: TKKAGSKIWEKSALE*RRAQWKRLTSSPWN
Trigger: GTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 90 bp TGCAGTCGGAAGCGGTCGGAGGTGAAGAGCAGGTACTCAGAGACATaGTGGCCGGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGC +
Preference number: 2 (lower is better)
Translates to: CSRKRSEVKSRYSET*WPVMSVRMSPVTTR
Trigger: GCGGGTGGTCACAGGCGACATCCTGACCGACATCACCGGCCACAATGTCTCTGAGTACCTGCTCTTCACCTCCGACCGCTTCCGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp AGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCGAAGCCCCTTGGTCCTaGACCTCCACTCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: SKINTGLTQLRPQPALGIEAPWS*TSTPGP
Trigger: AGGGCCTGGAGTGGAGGTTCAGGACCAAGGGGCTTC...GATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR TCA 90 bp CGCCCACAGCCCGCTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTCCAGCTGGCCCAAGCTaGTGGCTTCCCGCAGGACAG +
Preference number: 2 (lower is better)
Translates to: RPQPALGISLHRKREKLVPAGPS*WLPAGQ
Trigger: CTGTCCTGCGGGAAGCCATCAGCTTGGGCCAGCTGG...AACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAGCGGGCTGTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR GCA 90 bp CAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCTTGGGCGGTGAGCAGTaGCAGGCAGGGGCGAGGGGC +
Preference number: 2 (lower is better)
Translates to: QRSLFSKQNKYGTDPAPPLGGEQ*QAGARG
Trigger: GCCCCTCGCCCCTGCCTGGCACTGCTCACCGCCCAA...GGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR GCA 90 bp CATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCATCCATTCCTGCCACCTaGCAGCTGGCCCAAGCTGAT +
Preference number: 2 (lower is better)
Translates to: HGRVQGLEDQKPLGPEPPSIPAT*QLAQAD
Trigger: ATCAGCTTGGGCCAGCTGGCAGGTGGCAGGAATGGA...TGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR GCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCTCTTGTCCATCTCTCTaGGGATCTCCTCCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSSCPSL*GSPPEP
Trigger: TGGCTCAGGAGGAGATCCGCAGAGAGATGGACAAGA...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCATGGGCCAGCGAGATGTaGTCCGACTTGAGCTGGTAC +
Preference number: 2 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSWASEM*SDLSWY
Trigger: GTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCA...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CCA 90 bp GGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCATTGTTGAGTCCCTaGCCCAGCTCTGGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: GSAFGTIRGGNRSDHRAWPLLSP*PSSGWS
Trigger: TGACCACCCAGAGCTGGGCCAGGGACTCAACAATGG...CCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp AGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCGGCCCTGGCAGGCACTaGGGGACTTCTGTCCCCATT +
Preference number: 2 (lower is better)
Translates to: SKINTGLTQLRPQPALGIGPGRH*GTSVPI
Trigger: AATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCC...GATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp AGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCGCCGAGTACAGGGGCTaGAGGACCAGAAGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: SKINTGLTQLRPQPALGIAEYRG*RTRSPL
Trigger: CAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGC...GATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp TGTCTGCGTACTTGGTCAGCTCCAGCTTCTCCAGAGCCCACTTCACCACCCGGGAGTGACCACAGGGCATaGCCGAGTACAGGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: CLRTWSAPASPEPTSPPGSDHRA*PSTGAG
Trigger: TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACT...CCCGGGTGGTGAAGTGGGCTCTGGAGAAGCTGGAGCTGACCAAGTACGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CCA 90 bp AGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCTGGCGAGTCAGATaGGGCGGGCGAGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: RARGASSQSKINTGLTQLRWRVR*GGRGWG
Trigger: CCCCCACCCTCGCCCGCCCCATCTGACTCGCCAGCG...GAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp TCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGGAAGCCCCTTGGTCCTaGACCTCCACTCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: SKQNKYGTDPAPPTARSREAPWS*TSTPGP
Trigger: AGGGCCTGGAGTGGAGGTTCAGGACCAAGGGGCTTC...CCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR TCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGCCTTGTAGACCTTGGTaGGTTTGTCCACGCAGACAA +
Preference number: 2 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPPCRPW*VCPRRQ
Trigger: TTGTCTGCGTGGACAAACTCACCAAGGTCTACAAGG...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp TGCCAGCCGGCTTGTCTGCGTACTTGGTCAGCTCCAGCTTCTCCAGAGCCCACTGGTGTTCCTCCACCGTaGGCCGGTCAAAGAGCACAT +
Preference number: 2 (lower is better)
Translates to: CQPACLRTWSAPASPEPTGVPPP*AGQRAH
Trigger: ATGTGCTCTTTGACCGGCTCACGGTGGAGGAACACC...AGTGGGCTCTGGAGAAGCTGGAGCTGACCAAGTACGCAGACAAGCCGGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACATGGCGTAGTACTCGTTaGTGTACTCGTTGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: RQSRARVYAARAGSAFGTWRSTR*CTRCRP
Trigger: TGGCCTACAACGAGTACATCAACGAGTACTACGCCA...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp AGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACATTGGGCGGTGAGCAGTaGCAGGCAGGGGCGAGGGGC +
Preference number: 2 (lower is better)
Translates to: RSLFSKQNKYGTDPAPPTLGGEQ*QAGARG
Trigger: GCCCCTCGCCCCTGCCTGGCACTGCTCACCGCCCAA...TGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR GCA 90 bp CGCCCACAGCCCGCTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTCCTCGACAGGGCCTCTaGCTCCACCTCTTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: RPQPALGISLHRKREKLVPRQGL*LHLLQA
Trigger: AGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGG...AACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAGCGGGCTGTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp TTGAAGATGTCCACGCTCACCTTGGACATGAACTGGATCCAGCCGCAGGCCGCGCCTGCTCCAGGAAGCTaGGGATCTCCGCCGAGATGT +
Preference number: 2 (lower is better)
Translates to: LKMSTLTLDMNWIQPQAAPAPGS*GSPPRC
Trigger: ACATCTCGGCGGAGATCCGCAGCTTCCTGGAGCAGG...CGCGGCCTGCGGCTGGATCCAGTTCATGTCCAAGGTGAGCGTGGACATCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR CCA 90 bp GCAGGATGTAGGAGAGCTCCGTGCTTGTGTCTGAGACCAGCAGGCAGGAGGCCACCATTGTTGAGTCCCTaGCCCAGCTCTGGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: AGCRRAPCLCLRPAGRRPPLLSP*PSSGWS
Trigger: TGACCACCCAGAGCTGGGCCAGGGACTCAACAATGG...TGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCTCTCCTACATCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp CAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCGGGGGCCAAGCTGGGTaGGAGAGCGATGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: QRSLFSKQNKYGTDPAPPGGQAG*ESDGSW
Trigger: CCAGCTGCCATCGCTCTCCCACCCAGCTTGGCCCCC...GGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GACGCCCTCAACCGCCATGGCCACCAGTCCGCGGGTGACAATGTCCCACTCGAAGTCTTATTCATGGGGTaGTTGGTGACGGTGATGCCG +
Preference number: 2 (lower is better)
Translates to: DALNRHGHQSAGDNVPLEVLFMG*LVTVMP
Trigger: CGGCATCACCGTCACCAACCACCCCATGAATAAGAC...TTCGAGTGGGACATTGTCACCCGCGGACTGGTGGCCATGGCGGTTGAGGGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp TTGTCACTCTGCTTCTTGGCAAAGTTCACGAACACATTGTCCAGTGTGGTCTGGCGTCGCCTTGGGCGGTaGGCAGTGCCAGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LSLCFLAKFTNTLSSVVWRRLGR*AVPGRG
Trigger: GCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACG...CCAGACCACACTGGACAATGTGTTCGTGAACTTTGCCAAGAAGCAGAGTGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR TCA 90 bp CATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACATGCTCTTGAGCCGTaGGTAGAACCAGAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: HGRVQGLEDQKPLGPEPPHALEP*VEPEVF
Trigger: GAACACCTCTGGTTCTACTCACGGCTCAAGAGCATG...TGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp GCTGCGGATCTCCGCCGAGATGTTGAGCCAGACCTGGGCATAGTGAGTCACGTTTTGCTGGTCATGAGGTaGACGAGGAGGCCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: AADLRRDVEPDLGIVSHVLLVMR*TRRPRF
Trigger: GAACCTGGGCCTCCTCGTGCACCTCATGACCAGCAA...AACGTGACTCACTATGCCCAGGTCTGGCTCAACATCTCGGCGGAGATCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR-3UTR CCA 90 bp TCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTCCGAGGCCGGGCAGGAAGTGACCACAGGGCATaGCCGAGTACAGGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SASAFIVREKSWFRGRAGSDHRA*PSTGAG
Trigger: TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACT...TCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp TCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGAGTGACCACAGGGCATaGCCGAGTACAGGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SKQNKYGTDPAPPTARSRSDHRA*PSTGAG
Trigger: TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACT...CCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp ATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTGTAAGAGAGAAAAGCTaGTTCCGAGGCCGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: INTGLTQLRPQPALGISLVREKS*FRGRAG
Trigger: TCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTAC...AAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCATACTGCACCTTTGTGTaGTGCCGCTCCTTGAGCATG +
Preference number: 2 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSYCTFV*CRSLSM
Trigger: CATGCTCAAGGAGCGGCACCACACAAAGGTGCAGTA...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CAA 90 bp CACTCCTCCATGCTGTGTGATGTCAGCACCACTGAACGCCCTGTCTaGATGAGGTCAAGGATGAGGTTCCAGAGGAAGCGCCGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: HSSMLCDVSTTERPV*MRSRMRFQRKRRAL
Trigger: CAAGGCCCGGCGCTTCCTCTGGAACCTCATCCTTGACCTCATCAAGACAGGGCGTTCAGTGGTGCTGACATCACACAGCATGGAGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CAA 90 bp TGCTCCATCTTGCTGAACACCTGGGCCAGCGAGATGTGCTCCGACTaGAGCTGGTACTGCACCTTTGTGTGGTGCCGCTCCTTGAGCATG +
Preference number: 2 (lower is better)
Translates to: CSILLNTWASEMCSD*SWYCTFVWCRSLSM
Trigger: CATGCTCAAGGAGCGGCACCACACAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCAGGTGTTCAGCAAGATGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CCA 90 bp GGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTCCGAGGCCGGGCAGGAGACCATTGTTGAGTCCCTaGCCCAGCTCTGGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: GISLHRKREKLVPRPGRRPLLSP*PSSGWS
Trigger: TGACCACCCAGAGCTGGGCCAGGGACTCAACAATGG...TCTCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp GAGCAGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCACTCCACTCCAGGCCCTaGCAGGCACTGGGGGACTTC +
Preference number: 2 (lower is better)
Translates to: EQGQRSLFSKQNKYGTDPLHSRP*QALGDF
Trigger: GAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAG...TGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CCA 90 bp CTGCAGGAGAGCAGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGAGGACGGCAGGGAAGTTaGTGGGCGACGTGTAGGCCG +
Preference number: 2 (lower is better)
Translates to: LQESRARGASSQSKINTGGRQGS*WATCRP
Trigger: CGGCCTACACGTCGCCCACCAACTTCCCTGCCGTCC...TCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCTGCTCTCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 90 bp CGCTTCATGCCACCCGACAATGTCTGCACCAGTGAGTGCCGTTTGTaGGAGAGCTCCAGGTCCTCGATCATCTTGTCCATCTCTCTGCGG +
Preference number: 2 (lower is better)
Translates to: RFMPPDNVCTSECRL*ESSRSSIILSISLR
Trigger: CCGCAGAGAGATGGACAAGATGATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR TCA 90 bp GAGCAGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGAAGCCCCTTGGTCCTaGACCTCCACTCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: EQGQRSLFSKQNKYGTDPEAPWS*TSTPGP
Trigger: AGGGCCTGGAGTGGAGGTTCAGGACCAAGGGGCTTC...TGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR TCA 90 bp AGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGAAGCCCCTTGGTCCTaGACCTCCACTCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: RSLFSKQNKYGTDPAPPTEAPWS*TSTPGP
Trigger: AGGGCCTGGAGTGGAGGTTCAGGACCAAGGGGCTTC...TGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR GCA 90 bp AGAGACATTGTGGCCGGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATACAGCTTGCGCTTCATaGCACCCGACAATGTCTGCA +
Preference number: 2 (lower is better)
Translates to: RDIVAGDVGQDVACDHPHTACAS*HPTMSA
Trigger: TGCAGACATTGTCGGGTGGCATGAAGCGCAAGCTGT...ATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACCGGCCACAATGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp CTGCAGGAGAGCAGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGAGGATGGACATGGTGGTaGTCTTGCCCGCCCCGTTGT +
Preference number: 2 (lower is better)
Translates to: LQESRARGASSQSKINTGGWTWW*SCPPRC
Trigger: ACAACGGGGCGGGCAAGACCACCACCATGTCCATCC...TCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCTGCTCTCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CCA 90 bp CTCACTGTTCTCCAGCGACTGATCCTCCTCCGACACCTTGAGGAACACTTCCTCGCCTCATCCATGTGGTaGGTGGACAGAAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: LTVLQRLILLRHLEEHFLASSMW*VDRRMV
Trigger: CACCATCCTTCTGTCCACCCACCACATGGATGAGGC...GAGGAAGTGTTCCTCAAGGTGTCGGAGGAGGATCAGTCGCTGGAGAACAGTGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 90 bp TTGCGCTTCATGCCACCCGACAATGTCTGCACCAGTGAGTGCCGTTaGTTGGAGAGCTCCAGGTCCTCGATCATCTTGTCCATCTCTCTG +
Preference number: 2 (lower is better)
Translates to: LRFMPPDNVCTSECR*LESSRSSIILSISL
Trigger: CAGAGAGATGGACAAGATGATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR GCA 90 bp TTGTCACTCTGCTTCTTGGCAAAGTTCACGAACACATTGTCCAGTGTGGTCTGGAGGCAGGAGGCCACATaGTTGCGGATGAACTGGGAC +
Preference number: 2 (lower is better)
Translates to: LSLCFLAKFTNTLSSVVWRQEAT*LRMNWD
Trigger: GTCCCAGTTCATCCGCAAGCATGTGGCCTCCTGCCT...CCAGACCACACTGGACAATGTGTTCGTGAACTTTGCCAAGAAGCAGAGTGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp CCCACCCCCGACGGCAGCCGGAACGTGCTCACGAGCTaGTGGGGGCTGGCGTCGGGCGATAGCCGCAGCCGG +
Preference number: 3 (lower is better)
Translates to: PTPDGSRNVLTS*WGLASGDSRSR
Trigger: CCGGCTGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGTCGGGGGTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp TGGGTCAGCTCCGAGCACCGGGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGGCCCTCCGCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: WVSSEHRARLPA*PSPDAGPSAPG
Trigger: CCCTGGGGCGGAGGGCCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGCCCGGTGCTCGGAGCTGACCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp TGGGGCAGGAGAAGCCGGTGCCCTGCGCAGAGCAGGTaGAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGG +
Preference number: 3 (lower is better)
Translates to: WGRRSRCPAQSR*SGRAPVPGAAG
Trigger: CCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp CCACCCGCATCTGGGGCGGGTGCCCGCCCACACTGCTaGGGCAGGAGAAGCCGGTGCCCTGCGCAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: PPASGAGARPHC*GRRSRCPAQSR
Trigger: CCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCGGGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp CCTGCGACTGGGTCAGCTCCGAGCACCGGGCCAGATTaGCAGCGTGACCCTCCCCAGACGCCGGGCCCTCCG +
Preference number: 3 (lower is better)
Translates to: PATGSAPSTGPD*QRDPPQTPGPP
Trigger: CGGAGGGCCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGCCCGGTGCTCGGAGCTGACCCAGTCGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp GGCGCACCTTCAGCCACCCGCCGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACAGGGCCTCTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: GAPSATRRPACG*PGRPSTGPLPP
Trigger: TGGAGGCAGAGGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp CGCAGGTGGCACCCACCCCCGACGGCAGCCGGAACGTaGTCACGAGCTGCTGGGGGCTGGCGTCGGGCGATA +
Preference number: 3 (lower is better)
Translates to: RRWHPPPTAAGT*SRAAGGWRRAI
Trigger: TATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGTCGGGGGTGGGTGCCACCTGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp CTCCGTGTCCAGGTCCTCGGGCTCGTCTGCCACAAGTaGCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAG +
Preference number: 3 (lower is better)
Translates to: LRVQVLGLVCHK*PELRGGRPGPE
Trigger: CTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAGCCCGAGGACCTGGACACGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp ACGGCAGCCGGAACGTGCTCACGAGCTGCTGGGGGCTaGCGTCGGGCGATAGCCGCAGCCGGTACTCGCGGC +
Preference number: 3 (lower is better)
Translates to: TAAGTCSRAAGG*RRAIAAAGTRG
Trigger: GCCGCGAGTACCGGCTGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp ACCCCCGACGGCAGCCGGAACGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGATAGCCGCAGCCGGTAC +
Preference number: 3 (lower is better)
Translates to: TPDGSRNVLTSC*GLASGDSRSRY
Trigger: GTACCGGCTGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGTCGGGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp TCAACGTGGGCCCCAGCGAGCCGTTGGCGGGAGACTTaGGCACGCAGGTGGCACCCACCCCCGACGGCAGCC +
Preference number: 3 (lower is better)
Translates to: STWAPASRWRET*ARRWHPPPTAA
Trigger: GGCTGCCGTCGGGGGTGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACGGCTCGCTGGGGCCCACGTTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp GGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCTTaGGGCTGCCCTGGCCGACCCTCGACAGGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: GTGAPSATRRPA*GCPGRPSTGPL
Trigger: CAGAGGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp GCCCTCGTCCTCCGTGTCCAGGTCCTCGGGCTCGTCTaGCACAAGTGCCCGGAGCTCCGTGGGGGCAGACCG +
Preference number: 3 (lower is better)
Translates to: ALVLRVQVLGLV*HKCPELRGGRP
Trigger: CGGTCTGCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAGCCCGAGGACCTGGACACGGAGGACGAGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CAA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCCCAGCCGGCGTCGCCTaGGGCGGTGAGCAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATPAGVA*GGEQCQ
Trigger: CTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGG...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR GCA 72 bp CGAAGAACCGAGCCGCCAGCAGGCGCGACTCCCCGCTaGTCAGGTTCAACGTGGGCCCCAGCGAGCCGTTGG +
Preference number: 3 (lower is better)
Translates to: RRTEPPAGATPR*SGSTWAPASRW
Trigger: CCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCAGCGGGGAGTCGCGCCTGCTGGCGGCTCGGTTCTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp GGCCGGAGCAGGCTGAGCAAGCAGCCGAGAGGGGACTaGAGTGCGGATGGCGGCTCCGTCTCCTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GRSRLSKQPRGD*SADGGSVSCCS
Trigger: GGAGCAGCAGGAGACGGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTGCTTGCTCAGCCTGCTCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp CGGCGGGCGCAGTGGAAGCGTTTGACCAGCAGCCCGTaGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RRAQWKRLTSSP*NWRTFSHPPSS
Trigger: GCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCCGGGTCAGCCTTaGGCACAATTAGGGGCGGCA +
Preference number: 3 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLGPGQP*AQLGAA
Trigger: TGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CAA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACAAGAGTGCCTTGGAGTaGCGGCGGGCGCAGTGGAAG +
Preference number: 3 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHKSALE*RRAQWK
Trigger: CTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTT...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GCCAGCTCCCTCGTCGCCACGGGCAGAGCCCACAGATaGCGCCGACTGCAGCGATGCCTGCGACTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: ASSLVATGRAHR*RRLQRCLRLGQ
Trigger: CTGACCCAGTCGCAGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCCCGTGGCGACGAGGGAGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTaGGCTCGTCGAACAGCGCGTCACACTGCGGGCAGT +
Preference number: 3 (lower is better)
Translates to: AAACTAAGAPGP*ARRTARHTAGS
Trigger: ACTGCCCGCAGTGTGACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp ATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTaGGGCGGGTGCCCGCCCACACTGCTGGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: MSVRMSPVTTRI*GGCPPTLLGQE
Trigger: CTCCTGCCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATaGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGG +
Preference number: 3 (lower is better)
Translates to: PGQPCAPRSSAP*VGPWCQMRLGW
Trigger: CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
3UTR-3UTR CAA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGGGGCCGGGTCAGCCTTaGGCACAATTAGGGGCGGCA +
Preference number: 3 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQGPGQP*AQLGAA
Trigger: TGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp TCGTCGCCACGGGCAGAGCCCACAGATGACGCCGACTaGAGCGATGCCTGCGACTGGGTCAGCTCCGAGCAC +
Preference number: 3 (lower is better)
Translates to: SSPRAEPTDDAD*SDACDWVSSEH
Trigger: GTGCTCGGAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCCCGTGGCGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp CAGGAGATCCCACGCAGCCGCGTGTACAGCTGCAGGTaGTCCCGGGCCGTGAGCTCGTCGAACAGCGCGTCA +
Preference number: 3 (lower is better)
Translates to: QEIPRSRVYSCR*SRAVSSSNSAS
Trigger: TGACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCGTGGGATCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp CCCACAGATGACGCCGACTGCAGCGATGCCTGCGACTaGGTCAGCTCCGAGCACCGGGCCAGATTGCCAGCG +
Preference number: 3 (lower is better)
Translates to: PTDDADCSDACD*VSSEHRARLPA
Trigger: CGCTGGCAATCTGGCCCGGTGCTCGGAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCGTCATCTGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp GCGCAGTGGAAGCGTTTGACCAGCAGCCCGTGGAACTaGCGCACCTTCAGCCACCCGCCGTCCAGCTTGCGG +
Preference number: 3 (lower is better)
Translates to: AQWKRLTSSPWN*RTFSHPPSSLR
Trigger: CCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp CTGCAGGTCCTCATCCGGGGACGCTGGCGAGTCAGATaGGGCGGGCGAGGGTGGGGGTGGCACGAAATTGGA +
Preference number: 3 (lower is better)
Translates to: LQVLIRGRWRVR*GGRGWGWHEIG
Trigger: TCCAATTTCGTGCCACCCCCACCCTCGCCCGCCCCATCTGACTCGCCAGCGTCCCCGGATGAGGACCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAGTCTTGCCCGCCCCGTaGTGGCCCAAGAAGGAGACC +
Preference number: 3 (lower is better)
Translates to: RQSRARVYAARAGSAFGTVLPAP*WPKKET
Trigger: GGTCTCCTTCTTGGGCCACAACGGGGCGGGCAAGAC...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GTGCCTTGGAGTTGCGGCGGGCGCAGTGGAAGCGTTTaGCCAGCAGCCCGTGGAACTGGCGCACCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: VPWSCGGRSGSV*PAARGTGAPSA
Trigger: GGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GTTGTCCTGTCTCAGGGCCGGCGGCAGCTCATCCAGTaGCAGGTTCAGTGCCTCGGGGTGCAGCCGCAGCTC +
Preference number: 3 (lower is better)
Translates to: VVLSQGRRQLIQ*QVQCLGVQPQL
Trigger: GAGCTGCGGCTGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCCTGAGACAGGACAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR GCA 72 bp GCAGAGCCCACAGATGACGCCGACTGCAGCGATGCCTaGGACTGGGTCAGCTCCGAGCACCGGGCCAGATTG +
Preference number: 3 (lower is better)
Translates to: AEPTDDADCSDA*DWVSSEHRARL
Trigger: CAATCTGGCCCGGTGCTCGGAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp TCCTTCCAGGAGATCCCACGCAGCCGCGTGTACAGCTaGAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGC +
Preference number: 3 (lower is better)
Translates to: SFQEIPRSRVYS*RCSRAVSSSNS
Trigger: GCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCGTGGGATCTCCTGGAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp CCAGGTGCTGGAAGAGGCGCTCGAAAGCCCCCTTCTTaGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCCG +
Preference number: 3 (lower is better)
Translates to: PGAGRGARKPPS*RPRWAGCRRAP
Trigger: CGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGAAGGGGGCTTTCGAGCGCCTCTTCCAGCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp ACGCCGGGCCCTCCGCCCCAGGGAGCACATCCTTCCTaGACTCCTTCACATCGGCCTCACTGTTCTCCAGCG +
Preference number: 3 (lower is better)
Translates to: TPGPPPQGAHPS*TPSHRPHCSPA
Trigger: CGCTGGAGAACAGTGAGGCCGATGTGAAGGAGTCCAGGAAGGATGTGCTCCCTGGGGCGGAGGGCCCGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp GCTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTCCGAGGCCGGGCCCAGCCGGCGTCGCCTaGGGCGGTGAGCAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: ALGISLHRKREKLVPRPGPAGVA*GGEQCQ
Trigger: CTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGG...GCCCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CAA 90 bp CTCCCTCGTCGCCACGGGCAGAGCCCACAGATGACGCCGACTGCAGCGATGCCTAGGAGAGCTCCGTGCTaGTGTCTGAGACCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: LPRRHGQSPQMTPTAAMPRRAPC*CLRPAG
Trigger: GCCTGCTGGTCTCAGACACAAGCACGGAGCTCTCCT...AGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCCCGTGGCGACGAGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp GGTCGTGTCCATCAGCCCGAAGCTGCTGAGGTGCAGTaGATCCAGGCTGCGCTCCAGGTGCTGGAAGAGGCG +
Preference number: 3 (lower is better)
Translates to: GRVHQPEAAEVQ*IQAALQVLEEA
Trigger: CGCCTCTTCCAGCACCTGGAGCGCAGCCTGGATGCACTGCACCTCAGCAGCTTCGGGCTGATGGACACGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp ACCAGCAGGCAGGAGGCCACATGCTTGCGGATGAACTaGGACACCTGGAGCTCGGAGCAGCTGCTCAGCGGG +
Preference number: 3 (lower is better)
Translates to: TSRQEATCLRMN*DTWSSEQLLSG
Trigger: CCCGCTGAGCAGCTGCTCCGAGCTCCAGGTGTCCCAGTTCATCCGCAAGCATGTGGCCTCCTGCCTGCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp TGGGAGAAGAGTGCCTTGGAGTTGCGGCGGGCGCAGTaGAAGCGTTTGACCAGCAGCCCGTGGAACTGGCGC +
Preference number: 3 (lower is better)
Translates to: WEKSALELRRAQ*KRLTSSPWNWR
Trigger: GCGCCAGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp GACATGGCCACGATGATGAAGATGGCGATGACGACATCCGTGCCCTGCAGCAGGGGCCCCAGCGAGCCGTaGGCGGGAGACTTGAGCACG +
Preference number: 3 (lower is better)
Translates to: DMATMMKMAMTTSVPCSRGPSEP*AGDLST
Trigger: CGTGCTCAAGTCTCCCGCCAACGGCTCGCTGGGGCC...CCTGCTGCAGGGCACGGATGTCGTCATCGCCATCTTCATCATCGTGGCCATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp GACGCCCTCAACCGCCATGGCCACCAGTCCGCGGGTGACAATGTCCCACTCGAAGGGGGTGGCACGAAATaGGACAGTGGCAGCCCCTGT +
Preference number: 3 (lower is better)
Translates to: DALNRHGHQSAGDNVPLEGGGTK*DSGSPC
Trigger: ACAGGGGCTGCCACTGTCCAATTTCGTGCCACCCCC...TTCGAGTGGGACATTGTCACCCGCGGACTGGTGGCCATGGCGGTTGAGGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp ACAGAAGGATGGTGCGGCCTGGCTTGTACTTCAGGATaGGGTCCCAGATGGCGCGGCGCGCGTAGGGGTCCA +
Preference number: 3 (lower is better)
Translates to: TEGWCGLACTSG*GPRWRGARRGP
Trigger: TGGACCCCTACGCGCGCCGCGCCATCTGGGACCTCATCCTGAAGTACAAGCCAGGCCGCACCATCCTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp CTTCCTCCAGGGTCGTGTCCATCAGCCCGAAGCTGCTaGGGTGCAGTGCATCCAGGCTGCGCTCCAGGTGCT +
Preference number: 3 (lower is better)
Translates to: LPPGSCPSARSC*GAVHPGCAPGA
Trigger: AGCACCTGGAGCGCAGCCTGGATGCACTGCACCTCAGCAGCTTCGGGCTGATGGACACGACCCTGGAGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GCCACGGGGCTGGGTGTAGTTGTGGTACTGGGAAGGTaGCAGGACCAGCGGGGGCAGATCACCAATCTCCGG +
Preference number: 3 (lower is better)
Translates to: ATGLGVVVVLGR*QDQRGQITNLR
Trigger: CCGGAGATTGGTGATCTGCCCCCGCTGGTCCTGTCACCTTCCCAGTACCACAACTACACCCAGCCCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp TGCGCTGTGGCCGCCGCAGGAAGTTGTACTGGCACATaGTGGTCAGGAGGAAGCCCACGACGCCCTCAACCG +
Preference number: 3 (lower is better)
Translates to: CAVAAAGSCTGT*WSGGSPRRPQP
Trigger: CGGTTGAGGGCGTCGTGGGCTTCCTCCTGACCATCATGTGCCAGTACAACTTCCTGCGGCGGCCACAGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp CCGCAGGCGCGTACAGGATTTTGGGGTTGCTGGTCATaGGGTGCACGAGGAGGCCCAGGTTCCGCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: PQARTGFWGCWS*GARGGPGSAAP
Trigger: AGGAGCAGCGGAACCTGGGCCTCCTCGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCGCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR GCA 72 bp TGGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCCGTaGTTGTGTCTGAGACCAGCAGGCAGGAGGCCACAT +
Preference number: 3 (lower is better)
Translates to: WRPRWAGCRRAP*LCLRPAGRRPH
Trigger: ATGTGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp TCCAGGGTCGTGTCCATCAGCCCGAAGCTGCTGAGGTaGAGTGCATCCAGGCTGCGCTCCAGGTGCTGGAAG +
Preference number: 3 (lower is better)
Translates to: SRVVSISPKLLR*SASRLRSRCWK
Trigger: CTTCCAGCACCTGGAGCGCAGCCTGGATGCACTGCACCTCAGCAGCTTCGGGCTGATGGACACGACCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp CAGCCGCAGGCCGCGTTGTCAATGGTATCCAGCTGCTaGAGGAGGGCCATGCCACTGGGCAGCGAGAAGTTG +
Preference number: 3 (lower is better)
Translates to: QPQAALSMVSSC*RRAMPLGSEKL
Trigger: CAACTTCTCGCTGCCCAGTGGCATGGCCCTCCTGCAGCAGCTGGATACCATTGACAACGCGGCCTGCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR CCA 72 bp CATCCATCTCCGTGCGGATGTCGTGCCCGTAGATGGTaGCGGAACCCGACGTTGGAGGGAACAGGCCGGTCA +
Preference number: 3 (lower is better)
Translates to: HPSPCGCRARRW*RNPTLEGTGRS
Trigger: TGACCGGCCTGTTCCCTCCAACGTCGGGTTCCGCCACCATCTACGGGCACGACATCCGCACGGAGATGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp TCTCATCCATCTCCGTGCGGATGTCGTGCCCGTAGATaGTGGCGGAACCCGACGTTGGAGGGAACAGGCCGG +
Preference number: 3 (lower is better)
Translates to: SHPSPCGCRARR*WRNPTLEGTGR
Trigger: CCGGCCTGTTCCCTCCAACGTCGGGTTCCGCCACCATCTACGGGCACGACATCCGCACGGAGATGGATGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp AGAGGCGCTCGAAAGCCCCCTTCTTGGCGGCCTCGCTaGGCAGGATGTAGGAGAGCTCCGTGCTTGTGTCTG +
Preference number: 3 (lower is better)
Translates to: RGARKPPSWRPR*AGCRRAPCLCL
Trigger: CAGACACAAGCACGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGAAGGGGGCTTTCGAGCGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp GGCGGGCGAGGGTGGGGGTGGCACGAAATTGGACAGTaGCAGCCCCTGTGTGAAGGACTCCAGACACATGCT +
Preference number: 3 (lower is better)
Translates to: GGRGWGWHEIGQ*QPLCEGLQTHA
Trigger: AGCATGTGTCTGGAGTCCTTCACACAGGGGCTGCCACTGTCCAATTTCGTGCCACCCCCACCCTCGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp TGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTaGTGCCAAATGAGGCTGGGATGGACTTCAGGACGT +
Preference number: 3 (lower is better)
Translates to: CAPRSSAPWVGP*CQMRLGWTSGR
Trigger: ACGTCCTGAAGTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp ACAGGCATGCGCTGTGGCCGCCGCAGGAAGTTGTACTaGCACATGATGGTCAGGAGGAAGCCCACGACGCCC +
Preference number: 3 (lower is better)
Translates to: TGMRCGRRRKLY*HMMVRRKPTTP
Trigger: GGGCGTCGTGGGCTTCCTCCTGACCATCATGTGCCAGTACAACTTCCTGCGGCGGCCACAGCGCATGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp GACATGGCCACGATGATGAAGATGGCGATGACGACATCCGTGCCCTGCAGCAGGCCGTTGGCGGGAGACTaGAGCACGCAGGTGGCACCC +
Preference number: 3 (lower is better)
Translates to: DMATMMKMAMTTSVPCSRPLAGD*STQVAP
Trigger: GGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACGG...CCTGCTGCAGGGCACGGATGTCGTCATCGCCATCTTCATCATCGTGGCCATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCACATGCCCAGGTTCTaGCGGATCTCATCCATCTCC +
Preference number: 3 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSHMPRF*RISSIS
Trigger: GGAGATGGATGAGATCCGCAAGAACCTGGGCATGTG...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp TGTCTGCGTACTTGGTCAGCTCCAGCTTCTCCAGAGCCCACTTCACCACCCGGGTTGAAGGTGCTGGTCTaGCCCGCACCGTTGACGCCC +
Preference number: 3 (lower is better)
Translates to: CLRTWSAPASPEPTSPPGLKVLV*PAPLTP
Trigger: GGGCGTCAACGGTGCGGGCAAGACCAGCACCTTCAA...CCCGGGTGGTGAAGTGGGCTCTGGAGAAGCTGGAGCTGACCAAGTACGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CAA 90 bp CAGCGCAGGTGTTGCTGCAGCCTGCCCTGCTCCAGGAAGCTGCGGATCTCCGCCTACAGGATTTTGGGGTaGCTGGTCATGAGGTGCACG +
Preference number: 3 (lower is better)
Translates to: QRRCCCSLPCSRKLRISAYRILG*LVMRCT
Trigger: CGTGCACCTCATGACCAGCAACCCCAAAATCCTGTA...GGCGGAGATCCGCAGCTTCCTGGAGCAGGGCAGGCTGCAGCAACACCTGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR TCA 72 bp GCCGGTACTCGCGGCGCTCCTCGTTGGCGTAGGGGATaGAATTGCCACGGGGCTGGGTGTAGTTGTGGTACT +
Preference number: 3 (lower is better)
Translates to: AGTRGAPRWRRG*NCHGAGCSCGT
Trigger: AGTACCACAACTACACCCAGCCCCGTGGCAATTTCATCCCCTACGCCAACGAGGAGCGCCGCGAGTACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp CGACGCCCTCAACCGCCATGGCCACCAGTCCGCGGGTaGCAATGTCCCACTCGAACGGGGACTTCATCTTGT +
Preference number: 3 (lower is better)
Translates to: RRPQPPWPPVRG*QCPTRTGTSSC
Trigger: ACAAGATGAAGTCCCCGTTCGAGTGGGACATTGTCACCCGCGGACTGGTGGCCATGGCGGTTGAGGGCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp ACCATGTCATTGTCGGCGTCTCCCCGGAGCACTCGCTaGCGCTCACTGGCCACGTCCACATCATCCTCCACA +
Preference number: 3 (lower is better)
Translates to: TMSLSASPRSTR*RSLATSTSSST
Trigger: TGTGGAGGATGATGTGGACGTGGCCAGTGAGCGGCAGCGAGTGCTCCGGGGAGACGCCGACAATGACATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp GGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGGTaGAGCCGCAGCTCTGCTACATACTGCTGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: GSSSSDRFSASG*SRSSATYCCSQ
Trigger: CTGGCTGCAGCAGTATGTAGCAGAGCTGCGGCTGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR CCA 72 bp ATGGCCACGCAGACGAAGAAGGCTGGCAGCAAGATCTaGGAGAAGAGTGCCTTGGAGTTGCGGCGGGCGCAG +
Preference number: 3 (lower is better)
Translates to: MATQTKKAGSKI*EKSALELRRAQ
Trigger: CTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGTCTGCGTGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp TCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGGGGCCGGGTCAGCCTTaGGCACAATTAGGGGCGGCA +
Preference number: 3 (lower is better)
Translates to: SKQNKYGTDPAPPTARSRGPGQP*AQLGAA
Trigger: TGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC...CCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CAA 90 bp GGCATCAGCCTTCATCGTAAGAGAGAAAAGCTGGTTCCGAGGCCGGGCAGGAGAGGGCCGGGTCAGCCTTaGGCACAATTAGGGGCGGCA +
Preference number: 3 (lower is better)
Translates to: GISLHRKREKLVPRPGRRGPGQP*AQLGAA
Trigger: TGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC...TCTCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CAA 90 bp CTGCAGGAGAGCAGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACCAGCCGGCGTCGCCTaGGGCGGTGAGCAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: LQESRARGASSQSKINTGPAGVA*GGEQCQ
Trigger: CTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGG...TCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCTGCTCTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CAA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCATCATCCTCCACAGGCTaGGTAGACACAGGCATGCGC +
Preference number: 3 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSSSSTG*VDTGMR
Trigger: GCGCATGCCTGTGTCTACCAAGCCTGTGGAGGATGA...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GCTGGGCAGGATGTAGGAGAGCTCCGTGCTTGTGTCTaGGACCAGCAGGCAGGAGGCCACATGCTTGCGGAT +
Preference number: 3 (lower is better)
Translates to: AGQDVGELRACV*DQQAGGHMLAD
Trigger: ATCCGCAAGCATGTGGCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAGCTCTCCTACATCCTGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp CCTGCTCCAGGAAGCTGCGGATCTCCGCCGAGATGTTaGGCCAGACCTGGGCATAGTGAGTCACGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: PAPGSCGSPPRC*ARPGHSESRCP
Trigger: TGGGCAACGTGACTCACTATGCCCAGGTCTGGCTCAACATCTCGGCGGAGATCCGCAGCTTCCTGGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
3UTR CCA 72 bp GATCACCAATCTCCGGGACGGACAGGGCCACGGTCATaGCCACGCAGACGAAGAAGGCTGGCAGCAAGATCT +
Preference number: 3 (lower is better)
Translates to: DHQSPGRTGPRS*PRRRRRLAARS
Trigger: AGATCTTGCTGCCAGCCTTCTTCGTCTGCGTGGCCATGACCGTGGCCCTGTCCGTCCCGGAGATTGGTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCAGGTCCTCGATCATCTaGTCCATCTCTCTGCGGATC +
Preference number: 3 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSRSSII*SISLRI
Trigger: GATCCGCAGAGAGATGGACAAGATGATCGAGGACCT...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp TCTTGGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCCGTGCTTGTGTCTGAGAACCAGTGAGTGCCGTTaGTTGGAGAGCTCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: SWRPRWAGCRRAPCLCLRTSECR*LESSRS
Trigger: GGACCTGGAGCTCTCCAACAAACGGCACTCACTGGT...TCTCAGACACAAGCACGGAGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp AGAGACATTGTGGCCGGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCAGGAGGCCACATGCTaGCGGATGAACTGGGACACC +
Preference number: 3 (lower is better)
Translates to: RDIVAGDVGQDVACDHPHQEATC*RMNWDT
Trigger: GGTGTCCCAGTTCATCCGCAAGCATGTGGCCTCCTG...ATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACCGGCCACAATGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp TCTGCGGATCTCCTCCTGAGCCATGCTCTTGAGCCGTaGGTAGAACCAGAGGTGTTCCTCCACCGTGAGCCG +
Preference number: 3 (lower is better)
Translates to: SADLLLSHALEP*VEPEVFLHREP
Trigger: CGGCTCACGGTGGAGGAACACCTCTGGTTCTACTCACGGCTCAAGAGCATGGCTCAGGAGGAGATCCGCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp ATGAGGCTGGGATGGACTTCAGGACGTTTCCAAAGGTaGTGGCCCCATACCGGTGCAGTCGGAAGCGGTCGG +
Preference number: 3 (lower is better)
Translates to: MRLGWTSGRFQR*WPHTGAVGSGR
Trigger: CCGACCGCTTCCGACTGCACCGGTATGGGGCCATCACCTTTGGAAACGTCCTGAAGTCCATCCCAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp TCCTCCACCGTGAGCCGGTCAAAGAGCACATTGTGCTaGGGGCACATGCCCAGGTTCTTGCGGATCTCATCC +
Preference number: 3 (lower is better)
Translates to: SSTVSRSKSTLC*GHMPRFLRISS
Trigger: GGATGAGATCCGCAAGAACCTGGGCATGTGCCCGCAGCACAATGTGCTCTTTGACCGGCTCACGGTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp GACGAAGAAGGCTGGCAGCAAGATCTGGGAGAAGAGTaGCTTGGAGTTGCGGCGGGCGCAGTGGAAGCGTTT +
Preference number: 3 (lower is better)
Translates to: DEEGWQQDLGEE*LGVAAGAVEAF
Trigger: AAACGCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp TGGGCCAGCGAGATGTGCTCCGACTTGAGCTGGTACTaGACCTTTGTGTGGTGCCGCTCCTTGAGCATGGCT +
Preference number: 3 (lower is better)
Translates to: WASEMCSDLSWY*TFVWCRSLSMA
Trigger: AGCCATGCTCAAGGAGCGGCACCACACAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp CAGGGCCACGGTCATGGCCACGCAGACGAAGAAGGCTaGCAGCAAGATCTGGGAGAAGAGTGCCTTGGAGTT +
Preference number: 3 (lower is better)
Translates to: QGHGHGHADEEG*QQDLGEECLGV
Trigger: AACTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGCCTTCTTCGTCTGCGTGGCCATGACCGTGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp CGGTCGGAGGTGAAGAGCAGGTACTCAGAGACATTGTaGCCGGTGATGTCGGTCAGGATGTCGCCTGTGACC +
Preference number: 3 (lower is better)
Translates to: RSEVKSRYSETL*PVMSVRMSPVT
Trigger: GGTCACAGGCGACATCCTGACCGACATCACCGGCCACAATGTCTCTGAGTACCTGCTCTTCACCTCCGACCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp AACACCTGGGCCAGCGAGATGTGCTCCGACTTGAGCTaGTACTGCACCTTTGTGTGGTGCCGCTCCTTGAGC +
Preference number: 3 (lower is better)
Translates to: NTWASEMCSDLS*YCTFVWCRSLS
Trigger: GCTCAAGGAGCGGCACCACACAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCAGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp AGCACGCCAGACACCTGCTCCATCTTGCTGAACACCTaGGCCAGCGAGATGTGCTCCGACTTGAGCTGGTAC +
Preference number: 3 (lower is better)
Translates to: STPDTCSILLNT*ASEMCSDLSWY
Trigger: GTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCAGGTGTTCAGCAAGATGGAGCAGGTGTCTGGCGTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CAA 90 bp TTGTCACTCTGCTTCTTGGCAAAGTTCACGAACACATTGTCCAGTGTGGTCTGGCCAGCCGGCGTCGCCTaGGGCGGTGAGCAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: LSLCFLAKFTNTLSSVVWPAGVA*GGEQCQ
Trigger: CTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGG...CCAGACCACACTGGACAATGTGTTCGTGAACTTTGCCAAGAAGCAGAGTGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CAA 90 bp GGCTTGTCTGCGTACTTGGTCAGCTCCAGCTTCTCCAGAGCCCACTTCACCACCAGTGAGTGCCGTTTGTaGGAGAGCTCCAGGTCCTCG +
Preference number: 3 (lower is better)
Translates to: GLSAYLVSSSFSRAHFTTSECRL*ESSRSS
Trigger: CGAGGACCTGGAGCTCTCCAACAAACGGCACTCACT...GGTGGTGAAGTGGGCTCTGGAGAAGCTGGAGCTGACCAAGTACGCAGACAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR-3UTR CAA 90 bp AGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGCTCGGGCCGGGTCAGCCTTaGGCACAATTAGGGGCGGCA +
Preference number: 3 (lower is better)
Translates to: RARGASSQSKINTGLTQLGPGQP*AQLGAA
Trigger: TGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC...GAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR TCA 72 bp CCATCTCTCTGCGGATCTCCTCCTGAGCCATGCTCTTaGGCCGTGAGTAGAACCAGAGGTGTTCCTCCACCG +
Preference number: 3 (lower is better)
Translates to: PSLCGSPPEPCS*AVSRTRGVPPP
Trigger: CGGTGGAGGAACACCTCTGGTTCTACTCACGGCTCAAGAGCATGGCTCAGGAGGAGATCCGCAGAGAGATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp CACTGTTCTCCAGCGACTGATCCTCCTCCGACACCTTaGGGAACACTTCCTCCAGGGTCGTGTCCATCAGCC +
Preference number: 3 (lower is better)
Translates to: HCSPATDPPPTP*GTLPPGSCPSA
Trigger: GGCTGATGGACACGACCCTGGAGGAAGTGTTCCTCAAGGTGTCGGAGGAGGATCAGTCGCTGGAGAACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATaGGGCTGGGATGGACTTCAGGACGTTTCCAAAGGT +
Preference number: 3 (lower is better)
Translates to: DLPHHGWGPGAK*GWDGLQDVSKG
Trigger: ACCTTTGGAAACGTCCTGAAGTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp ACGGACAGCTTGCGCTTCATGCCACCCGACAATGTCTaGACCAGTGAGTGCCGTTTGTTGGAGAGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: TDSLRFMPPDNV*TSECRLLESSR
Trigger: CCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGCGCAAGCTGTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp CTCTCGGCATCAGCCTTCATCGTAAGAGAGAAAAGCTaGTTCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTG +
Preference number: 3 (lower is better)
Translates to: LSASAFIVREKS*FRGRAGERPAV
Trigger: CACTGCTGGCCTTTCTCCTGCCCGGCCTCGGAACCAGCTTTTCTCTCTTACGATGAAGGCTGATGCCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
3UTR-3UTR CAA 90 bp TCAAAGCAAAATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGAGGTTCAGGCTCAGCTaGTTCAGGGCCAGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: SKQNKYGTDPAPPTARSRRFRLS*FRASFL
Trigger: CAAGAAGCTGGCCCTGAACAAGCTGAGCCTGAACCT...CCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp CTTGCGCTTCATGCCACCCGACAATGTCTGCACCAGTaGGTGCCGTTTGTTGGAGAGCTCCAGGTCCTCGAT +
Preference number: 3 (lower is better)
Translates to: LALHATRQCLHQ*VPFVGELQVLD
Trigger: ATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp GACTCCTTCACATCGGCCTCACTGTTCTCCAGCGACTaGTCCTCCTCCGACACCTTGAGGAACACTTCCTCC +
Preference number: 3 (lower is better)
Translates to: DSFTSASLFSSD*SSSDTLRNTSS
Trigger: GGAGGAAGTGTTCCTCAAGGTGTCGGAGGAGGATCAGTCGCTGGAGAACAGTGAGGCCGATGTGAAGGAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp CGCTTCATGCCACCCGACAATGTCTGCACCAGTGAGTaGCGTTTGTTGGAGAGCTCCAGGTCCTCGATCATC +
Preference number: 3 (lower is better)
Translates to: RFMPPDNVCTSE*RLLESSRSSII
Trigger: GATGATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTGGCATGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR GCA 72 bp TGCTCCATCTTGCTGAACACCTGGGCCAGCGAGATGTaGTCCGACTTGAGCTGGTACTGCACCTTTGTGTGG +
Preference number: 3 (lower is better)
Translates to: CSILLNTWASEM*SDLSWYCTFVW
Trigger: CCACACAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCAGGTGTTCAGCAAGATGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR CCA 72 bp CTCCACCTCTTGCAGGCTGACATTGTCTGGGTCCTGTaGGTTATCAAAGAGGGGGCGGTAGTCGCCATAGAC +
Preference number: 3 (lower is better)
Translates to: LHLLQADIVWVL*VIKEGAVVAID
Trigger: GTCTATGGCGACTACCGCCCCCTCTTTGATAACCCACAGGACCCAGACAATGTCAGCCTGCAAGAGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp TCCGGGACTTGTAGACCTTGGTCAGGTTCTCAATCTTaGCCATGTCATTGTCGGCGTCTCCCCGGAGCACTC +
Preference number: 3 (lower is better)
Translates to: SGTCRPWSGSQS*PCHCRRLPGAL
Trigger: GAGTGCTCCGGGGAGACGCCGACAATGACATGGTCAAGATTGAGAACCTGACCAAGGTCTACAAGTCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR TCA 72 bp CGTCCTTCACACTCTGGCTGCTCTTGGTCCGCACCGTaGTCATGTAGCCATCTCCAAACCGGTTCTTCAGGT +
Preference number: 3 (lower is better)
Translates to: RPSHSGCSWSAP*SCSHLQTGSSG
Trigger: ACCTGAAGAACCGGTTTGGAGATGGCTACATGATCACGGTGCGGACCAAGAGCAGCCAGAGTGTGAAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
3UTR-3UTR CAA 90 bp AGGGCCAGAGGAGCCTCTTCTCAAAGCAAAATAAATACGGGACTGACCCAGCTCATGGTGCGGCCTGGCTaGTACTTCAGGATGAGGTCC +
Preference number: 3 (lower is better)
Translates to: RARGASSQSKINTGLTQLMVRPG*YFRMRS
Trigger: GGACCTCATCCTGAAGTACAAGCCAGGCCGCACCAT...GAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCCTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CCA 72 bp CACCCGACAATGTCTGCACCAGTGAGTGCCGTTTGTTaGAGAGCTCCAGGTCCTCGATCATCTTGTCCATCT +
Preference number: 3 (lower is better)
Translates to: HPTMSAPVSAVC*RAPGPRSSCPS
Trigger: AGATGGACAAGATGATCGAGGACCTGGAGCTCTCCAACAAACGGCACTCACTGGTGCAGACATTGTCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGCTGCCCCAGTGCCATTaGCCGCCCCACCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPLPQCH*PPHPHH
Trigger: GTGGTGCGGGTGGGGCGGCCAATGGCACTGGGGCAG...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGGTGCTCCCGGGCCGTaGGCTCGTCGAACAGCGCGT +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAGAPGP*ARRTAR
Trigger: ACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGGGCAGGAGAAGCCGGTaGCCTGCGCAGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPGRRSR*PAQSRC
Trigger: GCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCC...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCGCCTGCAGCCTCCGTaGGGGTGGCGCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGRLQPP*GWRLWR
Trigger: TCGCCACAGGCGCCACCCCCACGGAGGCTGCAGGCG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCGCCATAGGTGCCCTTaGGGAAGAGCGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGARHRCP*GRAGSR
Trigger: GCGGCTCCCCGCTCTTCCTCAAGGGCACCTATGGCG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CAGAGCAGGTGCAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCGGCCCATGACTGCCCCTaGCCCAGTGCCATTGGCCGC +
Preference number: 4 (lower is better)
Translates to: QSRCSGRAPVPGAAGRVPAHDCP*PSAIGR
Trigger: GCGGCCAATGGCACTGGGGCAGGGGCAGTCATGGGC...CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGTGCTGCAGCAGAGGGTaGGCCCTCCTCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGACCSRG*ALLSGG
Trigger: GCCACCGCTGAGGAGGGCGCACCCTCTGCTGCAGCA...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCCAGGGAGCTCATGTTaGCCCGCCGCAGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGPGSSC*PAAAPR
Trigger: CCGAGGCGCTGCGGCGGGGCAACATGAGCTCCCTGG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGGTGCCCGCCCACACTaGTGGGGCAGGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGGARPH*WGRRSR
Trigger: CCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGAGCCGCGTGTACAGCTaGAGGTGCTCCCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGASRVYS*RCSRAV
Trigger: CACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGTCAGGTGCTGGATGCTaGCCAGGCACCGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPSGAGC*PGTAGD
Trigger: GTCGCCTGCGGTGCCTGGGCAGCATCCAGCACCTGA...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCCAGTGCAGGCACCCTaGGGCAGTAGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAPVQAP*GSSRAR
Trigger: CCTGGCCCTGCTACTGCCCCAGGGTGCCTGCACTGG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CAGAGCAGGTGCAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCGGCAGCGTGTCCGGGGTaGCCAGTGCTGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSRCSGRAPVPGAAGRVPAACPG*PVLQQR
Trigger: CCTCTGCTGCAGCACTGGCCACCCCGGACACGCTGC...CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGCGAGCTGCTGGGGGCTaGCGTCGGGCGATAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRRAAGG*RRAIAA
Trigger: TGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCG...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCGAGCTGCTGGGGGCTaGCGTCGGGCGATAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCRAAGG*RRAIAA
Trigger: TGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCG...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGGTGACCACCCGCATCTaGGGCGGGTGCCCGCCCACA +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRVTTRI*GGCPPT
Trigger: TGTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCAC...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCCACCGGGGACTGGCTaGAGGTGTGCCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAPPGTG*RCATGC
Trigger: GCATCCAGTGGCACACCTTCAGCCAGTCCCCGGTGG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTCTTGCCCGCACCGTTaGCGCCCAGGAGCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRSCPHR*RPGARS
Trigger: GCTTCGGGCTCCTGGGCGTCAACGGTGCGGGCAAGA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTTCCCCCAGAAGCGCCTaGAGCCTCCGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLSPRSA*SLRGGG
Trigger: GCCACCCCCACGGAGGCTGCAGGCGCTTCTGGGGGA...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACTCCCCCAGAAGCGCCTaGAGCCTCCGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHSPRSA*SLRGGG
Trigger: GCCACCCCCACGGAGGCTGCAGGCGCTTCTGGGGGA...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGTGCTGCAGCAGAGGGTaGGCCCTCCTCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGCCSRG*ALLSGG
Trigger: GCCACCGCTGAGGAGGGCGCACCCTCTGCTGCAGCA...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTGCTGAGCACTGGCCCTaGAGCGTGTCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPAEHWP*SVSGVA
Trigger: GGCCACCCCGGACACGCTGCAGGGCCAGTGCTCAGC...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCTGAGCACTGGCCCTaGAGCGTGTCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQAEHWP*SVSGVA
Trigger: GGCCACCCCGGACACGCTGCAGGGCCAGTGCTCAGC...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp GTCCAGGTCCTCGGGCTCGTCTGCCACAAGTGCCCGGAGCTCCGTGGGGGCAGAACCCGCCGTCCAGCTTaGGGCTGCCCTGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: VQVLGLVCHKCPELRGGRTRRPA*GCPGRP
Trigger: GGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGT...TCTGCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAGCCCGAGGACCTGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGAACGTGCTCACGAGCTaGTGGGGGCTGGCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGNVLTS*WGLASG
Trigger: GCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTT...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGAGCCGCGTGTACAGCTaGAGGTGCTCCCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGSRVYS*RCSRAV
Trigger: CACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCT...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCAGCCGAGAGGGGACTaGAGTGCGGATGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGQPRGD*SADGGS
Trigger: GGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCCGAACTCGTCTCGCTaGCCGTCCGGGCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAPNSSR*PSGHSD
Trigger: ATCGCTGTGCCCGGACGGCCAGCGAGACGAGTTCGG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCCAGTGCAGGCACCCTaGGGCAGTAGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGPVQAP*GSSRAR
Trigger: CCTGGCCCTGCTACTGCCCCAGGGTGCCTGCACTGG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGGCAGCGTGTCCGGGGTaGCCAGTGCTGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRAACPG*PVLQQR
Trigger: CCTCTGCTGCAGCACTGGCCACCCCGGACACGCTGC...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCTGAAGGTGTGCCACTaGATGCCCACGCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGALKVCH*MPTPAT
Trigger: GGTGGCCGGCGTGGGCATCCAGTGGCACACCTTCAG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAACGCTGGCGAGTCAGATaGGGCGGGCGAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKRWRVR*GGRGWG
Trigger: CCCCCACCCTCGCCCGCCCCATCTGACTCGCCAGCG...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGTGACCACCCGCATCTaGGGCGGGTGCCCGCCCACA +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLVTTRI*GGCPPT
Trigger: TGTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCAC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCGGCAGGGAAGTTGGTaGGCGACGTGTAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGARQGSW*ATCRPA
Trigger: TGCCGGCCTACACGTCGCCCACCAACTTCCCTGCCG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACTGCCCGGGCCCGCACTaGGGGCCTCCAGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDCPGPH*GPPDAG
Trigger: GCCAGCATCTGGAGGCCCTCAGTGCGGGCCCGGGCA...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACCGCCATAGGTGCCCTTaGGGAAGAGCGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHRHRCP*GRAGSR
Trigger: GCGGCTCCCCGCTCTTCCTCAAGGGCACCTATGGCG...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCGGCAGAGCCCACAGATaGCGCCGACTGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCGRAHR*RRLQRC
Trigger: GCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCC...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCGTTGGCGGGAGACTTaGGCACGCAGGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGRWRET*ARRWHP
Trigger: TGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCTCAGGATGTCGCCTGTaGCCACCCGCATCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCSGCRL*PPASGA
Trigger: CGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGA...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CAGAGCAGGTGCAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCGCCACCAGTCCGCGGGTaGCAATGTCCCACTCGAACG +
Preference number: 4 (lower is better)
Translates to: QSRCSGRAPVPGAAGRVPPPVRG*QCPTRT
Trigger: CGTTCGAGTGGGACATTGTCACCCGCGGACTGGTGG...CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCTTGCCCGCACCGTTaGCGCCCAGGAGCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPSCPHR*RPGARS
Trigger: GCTTCGGGCTCCTGGGCGTCAACGGTGCGGGCAAGA...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGAGGCTGGGTACCCAATaGGGGCGATGGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGARLGTQ*GRWPWR
Trigger: TCTCCACGGCCATCGCCCTCATTGGGTACCCAGCCT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGGGCGACCGTTCACCATaGTGGCCAGCCGCGTGCACA +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRGDRSP*WPAACT
Trigger: TGTGCACGCGGCTGGCCATCATGGTGAACGGTCGCC...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGCCAGCTGGCCCAAGCTaGTGGCTTCCCGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRPAGPS*WLPAGQ
Trigger: CTGTCCTGCGGGAAGCCATCAGCTTGGGCCAGCTGG...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCTGAGGGCCTCCAGATaGTGGCGTAGGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGLRASR*WRRASS
Trigger: GCTCGAGGCCCTACGCCAGCATCTGGAGGCCCTCAG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTGCCCATGACTGCCCCTaGCCCAGTGCCATTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPAHDCP*PSAIGR
Trigger: GCGGCCAATGGCACTGGGGCAGGGGCAGTCATGGGC...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGCCCATGACTGCCCCTaGCCCAGTGCCATTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLAHDCP*PSAIGR
Trigger: GCGGCCAATGGCACTGGGGCAGGGGCAGTCATGGGC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAGCACCGGGCCAGATTaGCAGCGTGACCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGASTGPD*QRDPPQ
Trigger: CTGGGGAGGGTCACGCTGGCAATCTGGCCCGGTGCT...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCACCCGCCGTCCAGCTTaGGGCTGCCCTGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVTRRPA*GCPGRP
Trigger: GGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGT...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTAACGTGCTCACGAGCTaGTGGGGGCTGGCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLNVLTS*WGLASG
Trigger: GCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTT...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGAGACGTTCCAGGCCTaGAGGTCCTCATCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAETFQA*RSSSGD
Trigger: GTCCCCGGATGAGGACCTGCAGGCCTGGAACGTCTC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGGTGCCCGCCCACACTaGTGGGGCAGGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGGARPH*WGRRSR
Trigger: CCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACC...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCCGCATCTGGGGCGGGTaGCCGCCCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVRIWGG*PPTLLG
Trigger: CCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCG...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGTGATGTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCCGCATCTGGGGCGGGTaGCCGCCCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GDVGQDVACDHPHLGRVPRIWGG*PPTLLG
Trigger: CCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCG...GGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGACATCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGATGGCCCCATACCGGTaGAGTCGGAAGCGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAMAPYR*SRKRSE
Trigger: CTCCGACCGCTTCCGACTGCACCGGTATGGGGCCAT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGTCTTCAGGTGCTGGATaGTGCCCAGGCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGASSGAG*CPGTAG
Trigger: GCCTGCGGTGCCTGGGCAGCATCCAGCACCTGAAGA...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTCAGCCGAGAGGGGACTaGAGTGCGGATGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPQPRGD*SADGGS
Trigger: GGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTG...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGCGGCCAAGAGTGCTTaGGCCGTGCTATTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAAAKSA*AVLLGS
Trigger: GCTGCCCAATAGCACGGCCCAAGCACTCTTGGCCGC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGGGTGGCGCCTGTaGCGAGGAGTCCGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPWGWRL*RGVRAV
Trigger: AACGGCTCGGACTCCTCGCCACAGGCGCCACCCCCA...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCCCTCCACCGGGGACTaGCTGAAGGTGTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGPSTGD*LKVCHW
Trigger: CCAGTGGCACACCTTCAGCCAGTCCCCGGTGGAGGG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGGGCGGAACCCGACGTTaGAGGGAACAGGCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRGGTRR*REQAGQ
Trigger: CTGACCGGCCTGTTCCCTCCAACGTCGGGTTCCGCC...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCGTGCCCGTAGATGGTaGCGGAACCCGACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGARARRW*RNPTLE
Trigger: CTCCAACGTCGGGTTCCGCCACCATCTACGGGCACG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAAAGCTTGCGGCTGCCCTaGCCGACCCTCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKSLRLP*PTLDRA
Trigger: GGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCT...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CAGAGCAGGTGCAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCGTTGCGGCGGGCGCAGTaGAAGCGTTTGACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSRCSGRAPVPGAAGRVPLRRAQ*KRLTSS
Trigger: GCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAA...CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGGGAGAAGAGTGCCTTaGAGTTGCGGCGGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAGRRVP*SCGGRS
Trigger: ACTGCGCCCGCCGCAACTCCAAGGCACTCTTCTCCC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQVLTSC*GLASGD
Trigger: ATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCAC...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGTGCTCAGGTTCAACGTaGGCCCCAGCGAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGACSGST*APASRW
Trigger: CCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCA...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTTTCTGGCCCAGCGGTaGGCGGCAGGGAGACGTTCC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRFLAQR*AAGRRS
Trigger: GGAACGTCTCCCTGCCGCCCACCGCTGGGCCAGAAA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGCACAGGCATGCGCTGTaGCCGCCGCAGGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPHRHAL*PPQEVV
Trigger: TACAACTTCCTGCGGCGGCCACAGCGCATGCCTGTG...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTAAGGCCAGGACCCACTaGAAGGGAGGCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPKARTH*KGGRAA
Trigger: GGCCGCCCTGCCTCCCTTCCAGTGGGTCCTGGCCTT...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000614293.4
3UTR CAA 72 bp TGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCTaGCGGCTGCCCTGGCCGACCCTCGACAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WNWRTFSHPPSS*RLPWPTLDRAS
Trigger: AGAGGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
3UTR CAA 72 bp TTCAACGTGGGCCCCAGCGAGCCGTTGGCGGGAGACTaGAGCACGCAGGTGGCACCCACCCCCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: FNVGPSEPLAGD*STQVAPTPDGS
Trigger: GCTGCCGTCGGGGGTGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACGGCTCGCTGGGGCCCACGTTGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGACGGGCTCCGGCGTTTaGGCGTCACGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGATGSGV*ASRSSR
Trigger: TCTGGAAGAACGTGACGCTCAAACGCCGGAGCCCGT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
CDS-3UTR TCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTGCCCGGGCCCGCACTaGGGGCCTCCAGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSACPGPH*GPPDAG
Trigger: GCCAGCATCTGGAGGCCCTCAGTGCGGGCCCGGGCA...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACATGCCCGGGCCCGCACTaGGGGCCTCCAGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTCPGPH*GPPDAG
Trigger: GCCAGCATCTGGAGGCCCTCAGTGCGGGCCCGGGCA...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CACTCGCCAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAAGCCCGGCGTGCAGGTaGGCTGCTCCAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSPGRTPRHRRSTARIRPSPACR*AAPGGQ
Trigger: CTGCCCTCCTGGAGCAGCTCACCTGCACGCCGGGCT...TGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTGGCGAGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCAGCCCGGCGTGCAGGTaGGCTGCTCCAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATSPACR*AAPGGQ
Trigger: CTGCCCTCCTGGAGCAGCTCACCTGCACGCCGGGCT...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGTCTCCGCCGAGATGTTaGGCCAGACCTGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPSPPRC*ARPGHS
Trigger: ACTATGCCCAGGTCTGGCTCAACATCTCGGCGGAGA...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCCACCGGGGACTGGCTaGAGGTGTGCCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLPPGTG*RCATGC
Trigger: GCATCCAGTGGCACACCTTCAGCCAGTCCCCGGTGG...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVARLPA*PSPDAG
Trigger: CCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCGTTGGCGGGAGACTTaGGCACGCAGGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLRWRET*ARRWHP
Trigger: TGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACG...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCGCCGGTCAGCATCTTaGAGGTGCTGGTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGRRSAS*RCWSCP
Trigger: CGGGCAAGACCAGCACCTTCAAGATGCTGACCGGCG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGGTGCTCCCGGGCCGTaGGCTCGTCGAACAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATGAPGP*ARRTAR
Trigger: ACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACC...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGCGACCGTTCACCATaGTGGCCAGCCGCGTGCACA +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLGDRSP*WPAACT
Trigger: TGTGCACGCGGCTGGCCATCATGGTGAACGGTCGCC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGTCGCCTTGGGCGGTaGGCAGTGCCAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAARRLGR*AVPGRG
Trigger: GCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACG...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCCGTCGCCTTGGGCGGTaGGCAGTGCCAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSARRLGR*AVPGRG
Trigger: GCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACG...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGAAACGCCAGAGCTCCTaGGGGTTTCTGGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAKRQSS*GFLATE
Trigger: CTCGGTGGCCAGAAACCCGCAGGAGCTCTGGCGTTT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGCATCCAGGCCCAGCTaGTGGGAGACCTTGGCCACG +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLASRPS*WETLAT
Trigger: CGTGGCCAAGGTCTCCCAGCAGCTGGGCCTGGATGC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGCTGAGCACTGGCCCTaGAGCGTGTCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVAEHWP*SVSGVA
Trigger: GGCCACCCCGGACACGCTGCAGGGCCAGTGCTCAGC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCATGCCACTGGGCAGCGAGAAGTTGTCCTGTCTCAGGGCCGGCGGCAGCTGCTGAGCACTGGCCCTaGAGCGTGTCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPCHWAARSCPVSGPAAAAEHWP*SVSGVA
Trigger: GGCCACCCCGGACACGCTGCAGGGCCAGTGCTCAGC...AGCTGCCGCCGGCCCTGAGACAGGACAACTTCTCGCTGCCCAGTGGCATGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGCTGCAGCCTGCCCTaGTCCAGGAAGCTGCGGATC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRCCSLP*SRKLRI
Trigger: GATCCGCAGCTTCCTGGAGCAGGGCAGGCTGCAGCA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCAGCGCAGGTGTTGCTaGAGCCTGCCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLQRRCC*SLPCSR
Trigger: CCTGGAGCAGGGCAGGCTGCAGCAACACCTGCGCTG...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGGAGCTCGGAGCAGCTaGTCAGCGGGGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVGARSS*SAGPDL
Trigger: CAGGTCGGGCCCCGCTGAGCAGCTGCTCCGAGCTCC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGAGGCTGCGCTCCAGGTaGTGGAAGAGGCGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGARLRSR*WKRRSK
Trigger: TTTCGAGCGCCTCTTCCAGCACCTGGAGCGCAGCCT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGCAGTGCATCCAGGCTaGGCTCCAGGTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAAVHPG*APGAGR
Trigger: TCTTCCAGCACCTGGAGCGCAGCCTGGATGCACTGC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGCCGAAGCTGCTGAGGTaGAGTGCATCCAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRPKLLR*SASRLR
Trigger: GCGCAGCCTGGATGCACTGCACCTCAGCAGCTTCGG...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGACTGCAGCGATGCCTaGGACTGGGTCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGDCSDA*DWVSSE
Trigger: CTCGGAGCTGACCCAGTCGCAGGCATCGCTGCAGTC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCGACTGCAGCGATGCCTaGGACTGGGTCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCDCSDA*DWVSSE
Trigger: CTCGGAGCTGACCCAGTCGCAGGCATCGCTGCAGTC...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGCCTCGACAGGGCCTCTaGCTCCACCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRPRQGL*LHLLQA
Trigger: AGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGG...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGACCCGCCGTCCAGCTTaGGGCTGCCCTGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGTRRPA*GCPGRP
Trigger: GGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGT...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGACCCGCCGTCCAGCTTaGGGCTGCCCTGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWTRRPA*GCPGRP
Trigger: GGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGT...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTAACGTGCTCACGAGCTaGTGGGGGCTGGCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGNVLTS*WGLASG
Trigger: GCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTT...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCGAGACGTTCCAGGCCTaGAGGTCCTCATCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGAETFQA*RSSSGD
Trigger: GTCCCCGGATGAGGACCTGCAGGCCTGGAACGTCTC...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGGCGCGGCAGGGAGGGTaGCGACGTCCACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: TSARSSVGADRGRSRLSKARQGG*RRPHFW
Trigger: CCAGAAATGTGGACGTCGGCACCCTCCCTGCCGCGC...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCCCCGGAGCACTCGCTaGCGCTCACTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDPRSTR*RSLATS
Trigger: GGACGTGGCCAGTGAGCGGCAGCGAGTGCTCCGGGG...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CTCCCTCGTCGCCACGGGCAGAGCCCACAGATGACGCCGACTGCAGCGATGCCTCCCCGGAGCACTCGCTaGCGCTCACTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LPRRHGQSPQMTPTAAMPPRSTR*RSLATS
Trigger: GGACGTGGCCAGTGAGCGGCAGCGAGTGCTCCGGGG...AGGCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCCCGTGGCGACGAGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTTGCCGCCGCTGTAGGTaGCAGCCGGCTTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLCRRCR*QPACLR
Trigger: ACGCAGACAAGCCGGCTGGCACCTACAGCGGCGGCA...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCCGAGTAGTCCTCGATaGCCAGCACGCCAGACACCT +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAPSSPR*PARQTP
Trigger: AGGTGTCTGGCGTGCTGGGCATCGAGGACTACTCGG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGGCGGCTCCGTCTCCTaGTGCTCCAGGTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGGGSVS*CSRLSL
Trigger: GAGTGACAACCTGGAGCAGCAGGAGACGGAGCCGCC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCTTGGGCGGTGAGCAGTaGCAGGCAGGGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVLGGEQ*QAGARG
Trigger: GCCCCTCGCCCCTGCCTGGCACTGCTCACCGCCCAA...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACTTGGGCGGTGAGCAGTaGCAGGCAGGGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDLGGEQ*QAGARG
Trigger: GCCCCTCGCCCCTGCCTGGCACTGCTCACCGCCCAA...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTCGAGGCGGCCCCTGCTaGACGCGGCTCGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPRGGPC*TRLVFL
Trigger: GAGAAAAACGAGCCGCGTGCAGCAGGGGCCGCCTCG...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGGGTGCAGGAAGCCCATaGCGGGGCCACGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGGAGSP*RGHAPP
Trigger: CGGCGGAGCGTGGCCCCGCCATGGGCTTCCTGCACC...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGCTCCTGCGGGTTTCTaGCCACCGAGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAAPAGF*PPSPER
Trigger: TCTCTCTGGACTCGGTGGCCAGAAACCCGCAGGAGC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGAGGAGTCCGAGCCGTTaGGGGCATCCAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TSARSSVGADRGRSRLSKRSPSR*GHPGPA
Trigger: AGCTGGGCCTGGATGCCCCCAACGGCTCGGACTCCT...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCCAGCCTCCGTGGGGGTaGCGCCTGTGGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVQPPWG*RLWRGV
Trigger: GACTCCTCGCCACAGGCGCCACCCCCACGGAGGCTG...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCAGCCTCCGTGGGGGTaGCGCCTGTGGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQQPPWG*RLWRGV
Trigger: GACTCCTCGCCACAGGCGCCACCCCCACGGAGGCTG...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCCTGCCCCAGTGCCATTaGCCGCCCCACCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVLPQCH*PPHPHH
Trigger: GTGGTGCGGGTGGGGCGGCCAATGGCACTGGGGCAG...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACACGAAGGCTGAGCACTaGCCCTGCAGCGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHTKAEH*PCSVSG
Trigger: CCCGGACACGCTGCAGGGCCAGTGCTCAGCCTTCGT...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTAGCGCCGGCTCTCCATaGCACAGGCCTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPSAGSP*HRPGPP
Trigger: AGGAGGACCAGGCCTGTGCCATGGAGAGCCGGCGCT...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGCGGTCAGGATGGACATaGTGGTGGTCTTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRRSGWT*WWSCPP
Trigger: GGGCGGGCAAGACCACCACCATGTCCATCCTGACCG...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCGTGCCCGTAGATGGTaGCGGAACCCGACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SARSSVGADRGRSRLSKQRARRW*RNPTLE
Trigger: CTCCAACGTCGGGTTCCGCCACCATCTACGGGCACG...CTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAACGAAAGCCCCCTTCTTaGCGGCCTCGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQRKPPS*RPRWAG
Trigger: TCCTGCCCAGCGAGGCCGCCAAGAAGGGGGCTTTCG...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTTGCGGCGGGCGCAGTaGAAGCGTTTGACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRLRRAQ*KRLTSS
Trigger: GCTGCTGGTCAAACGCTTCCACTGCGCCCGCCGCAA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGTGCTCAGGTTCAACGTaGGCCCCAGCGAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: SARSSVGADRGRSRLSKQCSGST*APASRW
Trigger: CCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCA...CTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCGGGCGAGGGTGGGGGTaGCACGAAATTGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGAGRGWG*HEIGQW
Trigger: CCACTGTCCAATTTCGTGCCACCCCCACCCTCGCCC...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTTTCTGGCCCAGCGGTaGGCGGCAGGGAGACGTTCC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPFLAQR*AAGRRS
Trigger: GGAACGTCTCCCTGCCGCCCACCGCTGGGCCAGAAA...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCCCGCCCACACTGCTaGGGCAGGAGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATARPHC*GRRSRC
Trigger: GCACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGC...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCCATGGGTGGGGCCCTaGTGCCAAATGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCPWVGP*CQMRLG
Trigger: TCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGG...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGGGGAGAGGCTGGCGCTaGTCTTATTCATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPGRGWR*SYSWGG
Trigger: ACCACCCCATGAATAAGACCAGCGCCAGCCTCTCCC...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGACGGCAGGGAAGTTaGTGGGCGACGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLGRQGS*WATCRP
Trigger: CGGCCTACACGTCGCCCACCAACTTCCCTGCCGTCC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGACTGCAGTGCGGATaGCGGCTCCGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLGLQCG*RLRLLL
Trigger: CAGCAGGAGACGGAGCCGCCATCCGCACTGCAGTCC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGGTCTGGCCCCTTGCCTaGCCAGCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRVWPLA*PAGSAS
Trigger: AGAAGCTGACCCTGCTGGCCAGGCAAGGGGCCAGAC...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGACGGGCTCCGGCGTTTaGGCGTCACGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGTGSGV*ASRSSR
Trigger: TCTGGAAGAACGTGACGCTCAAACGCCGGAGCCCGT...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
CDS-3UTR TCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGCCCGGGCCCGCACTaGGGGCCTCCAGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLCPGPH*GPPDAG
Trigger: GCCAGCATCTGGAGGCCCTCAGTGCGGGCCCGGGCA...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCAGCCCGGCGTGCAGGTaGGCTGCTCCAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSSPACR*AAPGGQ
Trigger: CTGCCCTCCTGGAGCAGCTCACCTGCACGCCGGGCT...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGTCTCCGCCGAGATGTTaGGCCAGACCTGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGASPPRC*ARPGHS
Trigger: ACTATGCCCAGGTCTGGCTCAACATCTCGGCGGAGA...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCGTCGGGGAAGCCCTTaGAGATGTCCACGCTCACCT +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGRRGSP*RCPRSP
Trigger: AGGTGAGCGTGGACATCTTCAAGGGCTTCCCCGACG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGCCTCAATGTACCACGTaGGGATGCCATAGACCACGG +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPPQCTT*GCHRPR
Trigger: CCGTGGTCTATGGCATCCTCACGTGGTACATTGAGG...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCTGGGCTCGTCCAGGATaGTGGCGCGAGAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATWARPG*WRESRP
Trigger: TGGGCGGCTCTCGCGCCATCATCCTGGACGAGCCCA...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTTCAGCCCGAAGCTGCTaGGGTGCAGTGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLSARSC*GAVHPG
Trigger: GCCTGGATGCACTGCACCTCAGCAGCTTCGGGCTGA...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGG +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWARLPA*PSPDAG
Trigger: CCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGC...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCCACCTCTTGCAGGCTaGCATTGTCTGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAPPLAG*HCLGPV
Trigger: CACAGGACCCAGACAATGTCAGCCTGCAAGAGGTGG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGAGACATTGTGGCCGGTaGTGTCGGTCAGGATGTCGC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGARHCGR*CRSGCR
Trigger: GCGACATCCTGACCGACATCACCGGCCACAATGTCT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CAGAGCAGGTGCAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCGGGAAGCGGTCGGAGGTaGAGAGCAGGTACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QSRCSGRAPVPGAAGRVPGSGRR*RAGTQR
Trigger: TCTCTGAGTACCTGCTCTTCACCTCCGACCGCTTCC...CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp AGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGGGCCCTGGTGCCAAATaGGGCTGGGATGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: SARSSVGADRGRSRLSKQGPGAK*GWDGLQ
Trigger: CTGAAGTCCATCCCAGCCTCATTTGGCACCAGGGCC...CTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGTAGGCCATCTCCATaGGCCCGTGGCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRCRPSP*ARGPGC
Trigger: ACAACCTGGGCCACGGGCTCATGGAGATGGCCTACA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGTGTAGGCCATCTCCATaGGCCCGTGGCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGCRPSP*ARGPGC
Trigger: ACAACCTGGGCCACGGGCTCATGGAGATGGCCTACA...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGGGTGCTCCCGGGCCGTaGGCTCGTCGAACAGCGCGT +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGGAPGP*ARRTAR
Trigger: ACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACC...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR TCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCCGTCGCCTTGGGCGGTaGGCAGTGCCAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGRRLGR*AVPGRG
Trigger: GCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACG...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTCCCCCAGAAGCGCCTaGAGCCTCCGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSASPRSA*SLRGGG
Trigger: GCCACCCCCACGGAGGCTGCAGGCGCTTCTGGGGGA...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCTCCCCCAGAAGCGCCTaGAGCCTCCGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSSPRSA*SLRGGG
Trigger: GCCACCCCCACGGAGGCTGCAGGCGCTTCTGGGGGA...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGCCAGGGAGCTCATGTTaGCCCGCCGCAGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPPGSSC*PAAAPR
Trigger: CCGAGGCGCTGCGGCGGGGCAACATGAGCTCCCTGG...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCCCAGGGAGCTCATGTTaGCCCGCCGCAGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSAPGSSC*PAAAPR
Trigger: CCGAGGCGCTGCGGCGGGGCAACATGAGCTCCCTGG...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTTGCTGCAGCCTGCCCTaGTCCAGGAAGCTGCGGATC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLCCSLP*SRKLRI
Trigger: GATCCGCAGCTTCCTGGAGCAGGGCAGGCTGCAGCA...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGTTCTCCGCCACGATGTaGTGGATGGTCATGGCCACG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAFSATM*WMVMAT
Trigger: CGTGGCCATGACCATCCAGCACATCGTGGCGGAGAA...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCTGGCCACGGACAGCTTaGGCTTCATGCCACCCGACA +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGAWPRTA*ASCHPT
Trigger: TGTCGGGTGGCATGAAGCGCAAGCTGTCCGTGGCCA...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGGGAGCTCGGAGCAGCTaGTCAGCGGGGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGGARSS*SAGPDL
Trigger: CAGGTCGGGCCCCGCTGAGCAGCTGCTCCGAGCTCC...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCGGAGCTCGGAGCAGCTaGTCAGCGGGGCCCGACCTG +
Preference number: 4 (lower is better)
Translates to: VENLGSPAHRDLPHHGWGGARSS*SAGPDL
Trigger: CAGGTCGGGCCCCGCTGAGCAGCTGCTCCGAGCTCC...GCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAGGCTGCGCTCCAGGTaGTGGAAGAGGCGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGARLRSR*WKRRSK
Trigger: TTTCGAGCGCCTCTTCCAGCACCTGGAGCGCAGCCT...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCAGTGCATCCAGGCTaGGCTCCAGGTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGAVHPG*APGAGR
Trigger: TCTTCCAGCACCTGGAGCGCAGCCTGGATGCACTGC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCACCCGCCGTCCAGCTTaGGGCTGCCCTGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSTRRPA*GCPGRP
Trigger: GGGTCGGCCAGGGCAGCCGCAAGCTGGACGGCGGGT...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCAACGTGCTCACGAGCTaGTGGGGGCTGGCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATNVLTS*WGLASG
Trigger: GCCCGACGCCAGCCCCCAGCAGCTCGTGAGCACGTT...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGACGGCAGCCGGAACGTaGTCACGAGCTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RTAIFRTMGGALVPNEAGTAAGT*SRAAGG
Trigger: GCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGT...CCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAAGCGCGGCAGGGAGGGTaGCGACGTCCACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKARQGG*RRPHFW
Trigger: CCAGAAATGTGGACGTCGGCACCCTCCCTGCCGCGC...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CACTCGCCAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCACCTGCGCAGAGCAGGTaGAGCGGACGGGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: HSPGRTPRHRRSTARIRPPAQSR*SGRAPV
Trigger: TACGGGAGCCCGTCCGCTGCACCTGCTCTGCGCAGG...TGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTGGCGAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp CGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGCCTGCGCAGAGCAGGTaGAGCGGACGGGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: RTAIFRTMGGALVPNEAGPAQSR*SGRAPV
Trigger: TACGGGAGCCCGTCCGCTGCACCTGCTCTGCGCAGG...CCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGGCAGGAGAAGCCGGTaGCCTGCGCAGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATGRRSR*PAQSRC
Trigger: GCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCC...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAGGTGCCCGCCCACACTaGTGGGGCAGGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQGARPH*WGRRSR
Trigger: CCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACC...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCGGTGCCCGCCCACACTaGTGGGGCAGGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAAGARPH*WGRRSR
Trigger: CCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACC...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGACCGCATCTGGGGCGGGTaGCCGCCCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AIFRTMGGALVPNEAGMDRIWGG*PPTLLG
Trigger: CCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCG...GTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGCCCCGGAGCACTCGCTaGCGCTCACTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPPRSTR*RSLATS
Trigger: GGACGTGGCCAGTGAGCGGCAGCGAGTGCTCCGGGG...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCCAGCCGGCTTGTCTaGGTACTTGGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGASRLV*VLGQLQ
Trigger: CTGGAGCTGACCAAGTACGCAGACAAGCCGGCTGGC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGGCCAGCCGGCTTGTCTaGGTACTTGGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SARSSVGADRGRSRLSKQASRLV*VLGQLQ
Trigger: CTGGAGCTGACCAAGTACGCAGACAAGCCGGCTGGC...CTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAATCTTCAGGTGCTGGATaGTGCCCAGGCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQSSGAG*CPGTAG
Trigger: GCCTGCGGTGCCTGGGCAGCATCCAGCACCTGAAGA...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCCGAGTAGTCCTCGATaGCCAGCACGCCAGACACCT +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGPSSPR*PARQTP
Trigger: AGGTGTCTGGCGTGCTGGGCATCGAGGACTACTCGG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGTCCATTCCTGCCACCTaGCAGCTGGCCCAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGASIPAT*QLAQAD
Trigger: ATCAGCTTGGGCCAGCTGGCAGGTGGCAGGAATGGA...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGGTGGATCTGTCCAGGTaGCTCCCCGAGGTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQVDLSR*LPEVPG
Trigger: CCCGGGCACCTCGGGGAGCCACCTGGACAGATCCAC...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGTTGGCCACGTCCAGCTaGTTCCGGAGCTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGLATSS*FRSSAD
Trigger: GTCTGCTGAGCTCCGGAACCAGCTGGACGTGGCCAA...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTGCTGCTGGGAGACCTTaGCCACGTCCAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPAAGRP*PRPAGS
Trigger: GGAACCAGCTGGACGTGGCCAAGGTCTCCCAGCAGC...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTCGCCTGCAGCCTCCGTaGGGGTGGCGCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLRLQPP*GWRLWR
Trigger: TCGCCACAGGCGCCACCCCCACGGAGGCTGCAGGCG...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGTCCTGCAGAACCTTCTaGGCATCCAGCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGSCRTF*ASSRSP
Trigger: GGGGGACCTGCTGGATGCCCAGAAGGTTCTGCAGGA...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACTGCCCCAGTGCCATTaGCCGCCCCACCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQLPQCH*PPHPHH
Trigger: GTGGTGCGGGTGGGGCGGCCAATGGCACTGGGGCAG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCAGCGGCCGCCAGTATTaGGCCCAGGCCGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATSGRQY*AQAASR
Trigger: CCTACTGGCGGCCTGGGCCCAATACTGGCGGCCGCT...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGTGCTGTCACGGAGATaGACAGCTGCACAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAVLSRR*TAAQSR
Trigger: CCGGCTTTGTGCAGCTGTCCATCTCCGTGACAGCAC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAACCCTCCACCGGGGACTaGCTGAAGGTGTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKPSTGD*LKVCHW
Trigger: CCAGTGGCACACCTTCAGCCAGTCCCCGGTGGAGGG...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGGATGGACATGGTGGTaGTCTTGCCCGCCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGGWTWW*SCPPRC
Trigger: ACAACGGGGCGGGCAAGACCACCACCATGTCCATCC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAAGGCGGAACCCGACGTTaGAGGGAACAGGCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKGGTRR*REQAGQ
Trigger: CTGACCGGCCTGTTCCCTCCAACGTCGGGTTCCGCC...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTCGTGCCCGTAGATGGTaGCGGAACCCGACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPRARRW*RNPTLE
Trigger: CTCCAACGTCGGGTTCCGCCACCATCTACGGGCACG...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCTCTTGGCGGCCTCGCTaGGCAGGATGTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCSWRPR*AGCRRA
Trigger: AGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGA...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAACTGCGCTCCAGGTGCTaGAAGAGGCGCTCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQLRSRC*KRRSKA
Trigger: GGCTTTCGAGCGCCTCTTCCAGCACCTGGAGCGCAG...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGAGCTTGCGGCTGCCCTaGCCGACCCTCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPSLRLP*PTLDRA
Trigger: GGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCT...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCAGCTTGCGGCTGCCCTaGCCGACCCTCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSASLRLP*PTLDRA
Trigger: GGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCT...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCAGCTTGCGGCTGCCCTaGCCGACCCTCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSSLRLP*PTLDRA
Trigger: GGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCT...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTTGACCAGCAGCCCGTaGAACTGGCGCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRLTSSP*NWRTFS
Trigger: GCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATVLTSC*GLASGD
Trigger: ATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCAC...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGGGGGTGGCACGAAATTaGACAGTGGCAGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRGVARN*TVAAPV
Trigger: CACAGGGGCTGCCACTGTCCAATTTCGTGCCACCCC...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGGCCCGCCCACACTGCTaGGGCAGGAGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWARPHC*GRRSRC
Trigger: GCACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGC...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGACACGTAGGCGGAGCTaGGGACCTCGAACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRTRRRS*GPRTRR
Trigger: CCTTCTGGTTCGAGGTCCCCAGCTCCGCCTACGTGT...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGACGTCCTTCACACTCTaGCTGCTCTTGGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGATSFTL*LLLVRT
Trigger: GGTGCGGACCAAGAGCAGCCAGAGTGTGAAGGACGT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTGGCCCTGGCAGGCACTaGGGGACTTCTGTCCCCATT +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPGPGRH*GTSVPI
Trigger: AATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCC...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCAGCCGGCGTCGCCTTaGGCGGTGAGCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGQPASP*AVSSAR
Trigger: CCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTG...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCAGCCGGCGTCGCCTTaGGCGGTGAGCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAAQPASP*AVSSAR
Trigger: CCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTG...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGGGGGCCAAGCTGGGTaGGAGAGCGATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVGGQAG*ESDGSW
Trigger: CCAGCTGCCATCGCTCTCCCACCCAGCTTGGCCCCC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
3UTR CAA 72 bp CCGCTGCTCAGGTTCAACGTGGGCCCCAGCGAGCCGTaGGCGGGAGACTTGAGCACGCAGGTGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: PLLRFNVGPSEP*AGDLSTQVAPT
Trigger: GGTGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCGGCTCCAGGGCTCCTaGCCCTTGTGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGRLQGS*PLWRPD
Trigger: GTCTGGCCTCCACAAGGGTCAGGAGCCCTGGAGCCG...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACGGCTCCAGGGCTCCTaGCCCTTGTGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQRLQGS*PLWRPD
Trigger: GTCTGGCCTCCACAAGGGTCAGGAGCCCTGGAGCCG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGACTCTCAGGCACAGTaGGGATCCGGCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVDSQAQ*GSGPAP
Trigger: GGGAGCTGGGCCGGATCCTCACTGTGCCTGAGAGTC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGCTGCTCCTTGCTCGTaGAGCCCAGGGAGCTCATGT +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLAAPCS*SPGSSC
Trigger: ACATGAGCTCCCTGGGCTTCACGAGCAAGGAGCAGC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACCGCTCACCTTGGACATaGACTGGATCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHRSPWT*TGSSRR
Trigger: CCTGCGGCTGGATCCAGTTCATGTCCAAGGTGAGCG...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCCAGGAAGCAGAACATaGTGGTGGCCACCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGPGSRT*WWPPRR
Trigger: TCTACGCGGTGGCCACCATCATGTTCTGCTTCCTGG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCCAGGAAGCAGAACATaGTGGTGGCCACCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCPGSRT*WWPPRR
Trigger: TCTACGCGGTGGCCACCATCATGTTCTGCTTCCTGG...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGCCACCGGGGACTGGCTaGAGGTGTGCCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: RTAIFRTMGGALVPNEAGPPGTG*RCATGC
Trigger: GCATCCAGTGGCACACCTTCAGCCAGTCCCCGGTGG...CCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGCATGCTCTTGAGCCGTaGGTAGAACCAGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPHALEP*VEPEVF
Trigger: GAACACCTCTGGTTCTACTCACGGCTCAAGAGCATG...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACATGGGCTCGTCCAGGATaGTGGCGCGAGAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTWARPG*WRESRP
Trigger: TGGGCGGCTCTCGCGCCATCATCCTGGACGAGCCCA...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGCGCCATAGGTGCCCTTaGGGAAGAGCGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPRHRCP*GRAGSR
Trigger: GCGGCTCCCCGCTCTTCCTCAAGGGCACCTATGGCG...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCCACATGCTTGCGGATaGACTGGGACACCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCPHACG*TGTPGA
Trigger: AGCTCCAGGTGTCCCAGTTCATCCGCAAGCATGTGG...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGAGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGG +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGARLPA*PSPDAG
Trigger: CCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGC...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CTTCCAGGAGATCCCACGCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTGGCAGAGCCCACAGATaGCGCCGACTGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: LPGDPTQPRVQLQVLPGRGRAHR*RRLQRC
Trigger: GCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCC...ACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCGTGGGATCTCCTGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCCCACCTCTTGCAGGCTaGCATTGTCTGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGAPPLAG*HCLGPV
Trigger: CACAGGACCCAGACAATGTCAGCCTGCAAGAGGTGG...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGTGGTACTGGGAAGGTaGCAGGACCAGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVVVLGR*QDQRGQ
Trigger: CTGCCCCCGCTGGTCCTGTCACCTTCCCAGTACCAC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTCGTTGGCGTAGGGGATaGAATTGCCACGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGRWRRG*NCHGAG
Trigger: CCCAGCCCCGTGGCAATTTCATCCCCTACGCCAACG...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGTGGCAGCCCCTGTGTaGAGGACTCCAGACACATGC +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQVAAPV*RTPDTC
Trigger: GCATGTGTCTGGAGTCCTTCACACAGGGGCTGCCAC...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCTCAGGATGTCGCCTGTaGCCACCCGCATCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATSGCRL*PPASGA
Trigger: CGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGA...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCGGACGTTTCCAAAGGTaGTGGCCCCATACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCGRFQR*WPHTGA
Trigger: TGCACCGGTATGGGGCCATCACCTTTGGAAACGTCC...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATCTTGCCCGCACCGTTaGCGCCCAGGAGCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQSCPHR*RPGARS
Trigger: GCTTCGGGCTCCTGGGCGTCAACGGTGCGGGCAAGA...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAAAGGCTGGGTACCCAATaGGGGCGATGGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKRLGTQ*GRWPWR
Trigger: TCTCCACGGCCATCGCCCTCATTGGGTACCCAGCCT...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTCCGGGAAGTTGCGGTTaGAGAACCGCACCACGTCCT +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPPGSCG*RTAPRP
Trigger: AGGACGTGGTGCGGTTCTTCAACCGCAACTTCCCGG...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCCTGCTCCATCTTGCTaGACACCTGGGCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: TSARSSVGADRGRSRLSKPAPSC*TPGPAR
Trigger: TCTCGCTGGCCCAGGTGTTCAGCAAGATGGAGCAGG...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp CGCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCAGAGCGTGTCCGTGTTaGAGGACAGCTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RSRVYSCRCSRAVSSSNSRACPC*RTAGPA
Trigger: AGCGGGCCCAGCTGTCCTTCAACACGGACACGCTCT...GCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCGGCGTGCAGGTGAGCTaGTCCAGGAGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAAGVQVS*SRRAGA
Trigger: GGCTCCTGCCCTCCTGGAGCAGCTCACCTGCACGCC...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACGCATCCAGGCCCAGCTaGTGGGAGACCTTGGCCACG +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDASRPS*WETLAT
Trigger: CGTGGCCAAGGTCTCCCAGCAGCTGGGCCTGGATGC...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGCATCCAGGCCCAGCTaGTGGGAGACCTTGGCCACG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVASRPS*WETLAT
Trigger: CGTGGCCAAGGTCTCCCAGCAGCTGGGCCTGGATGC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCTGCTGCAGCAGAGGGTaGGCCCTCCTCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSCCSRG*ALLSGG
Trigger: GCCACCGCTGAGGAGGGCGCACCCTCTGCTGCAGCA...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTTGCTGGTCATGAGGTaGACGAGGAGGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRLLVMR*TRRPRF
Trigger: GAACCTGGGCCTCCTCGTGCACCTCATGACCAGCAA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTAACCAGGCCACCCAGTaGACCGCGTTGTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGNQATQ*TALFRP
Trigger: GGGCCTGAACAACGCGGTGCACTGGGTGGCCTGGTT...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCGGCCACCGCGTAGACTaGCAGGAAGAGCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGAGHRVD*QEEPDD
Trigger: ATCATCTGGCTCTTCCTGGCAGTCTACGCGGTGGCC...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCTTCTGTCCGCCCACTaGCCAGCCAGTAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGLLSAH*PASRTS
Trigger: AGAAGTCCTACTGGCTGGGCAGTGGGCGGACAGAAG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGCTTCTGTCCGCCCACTaGCCAGCCAGTAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRLLSAH*PASRTS
Trigger: AGAAGTCCTACTGGCTGGGCAGTGGGCGGACAGAAG...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGTGGCCACGGACAGCTTaGGCTTCATGCCACCCGACA +
Preference number: 4 (lower is better)
Translates to: TSARSSVGADRGRSRLSKWPRTA*ASCHPT
Trigger: TGTCGGGTGGCATGAAGCGCAAGCTGTCCGTGGCCA...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCGCCGACTGCAGCGATaGCTGCGACTGGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDRRLQR*LRLGQL
Trigger: GAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCG...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAACCTCGACAGGGCCTCTaGCTCCACCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKPRQGL*LHLLQA
Trigger: AGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGG...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACA +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGRPACG*PGRPST
Trigger: TGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACG...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGACGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACA +
Preference number: 4 (lower is better)
Translates to: APRSSAPWVGPWCQMRLGRPACG*PGRPST
Trigger: TGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACG...TCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGATCTGGGAGAAGAGTaGCTTGGAGTTGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLDLGEE*LGVAAG
Trigger: GCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGAACGGCAGCCGGAACGTaGTCACGAGCTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: APRSSAPWVGPWCQMRLGTAAGT*SRAAGG
Trigger: GCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGT...TCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCGGCGCGACTCCCCGCTaGTCAGGTTCAACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAAGATPR*SGSTWA
Trigger: GGCCCACGTTGAACCTGAGCAGCGGGGAGTCGCGCC...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACCTGCGCAGAGCAGGTaGAGCGGACGGGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQPAQSR*SGRAPV
Trigger: TACGGGAGCCCGTCCGCTGCACCTGCTCTGCGCAGG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGCCTGCGCAGAGCAGGTaGAGCGGACGGGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPPAQSR*SGRAPV
Trigger: TACGGGAGCCCGTCCGCTGCACCTGCTCTGCGCAGG...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCAGGAGAAGCCGGTaGCCTGCGCAGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPGRRSR*PAQSRC
Trigger: GCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCC...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGGGCAGGAGAAGCCGGTaGCCTGCGCAGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWGRRSR*PAQSRC
Trigger: GCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCC...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACGCATCTGGGGCGGGTaGCCGCCCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGRVQGLEDQKPLGPEPPRIWGG*PPTLLG
Trigger: CCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCG...TGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAACCTCCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGCGCATCTGGGGCGGGTaGCCGCCCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EPPLQALAGTGGLLSPLLRIWGG*PPTLLG
Trigger: CCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCG...CAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAGGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCGCATCTGGGGCGGGTaGCCGCCCACACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSAFGTIRGGNRSDHRAWRIWGG*PPTLLG
Trigger: CCCCAGCAGTGTGGGCGGGCACCCGCCCCAGATGCG...CCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCCCGCCGGGTTGCCCTTaGTCTTGGGCAGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVPPGCP*SWAGWH
Trigger: GTGCCAACCTGCCCAAGAGCAAGGGCAACCCGGCGG...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGCTGACAAACTGCAGGTaGTTGGCCTTGGTGGACTTC +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPLTNCR*LALVDF
Trigger: GAAGTCCACCAAGGCCAAGCACCTGCAGTTTGTCAG...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGCCGTTCAGGTCCTTGTCGTaGTCGAAGAGCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARSSVGADRGRSRLSKQPFRSLS*SKSCSR
Trigger: CCTGCTACAGCTCTTCGAGCACGACAAGGACCTGAA...CGGCTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGAGCCGCGTGTACAGCTaGAGGTGCTCCCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGSRVYS*RCSRAV
Trigger: CACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCT...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGAACCGGTTCTTCAGGTaGTGGATGCTGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGNRFFR*WMLPRH
Trigger: GTGCCTGGGCAGCATCCAGCACCTGAAGAACCGGTT...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGTGGGCCAGCGAGATGTaGTCCGACTTGAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGWASEM*SDLSWY
Trigger: GTACCAGCTCAAGTCGGAGCACATCTCGCTGGCCCA...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CAGAGCAGGTGCAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCGAGCACGCCAGACACCTaGTCCATCTTGCTGAACACC +
Preference number: 4 (lower is better)
Translates to: QSRCSGRAPVPGAAGRVPSTPDT*SILLNT
Trigger: GGTGTTCAGCAAGATGGAGCAGGTGTCTGGCGTGCT...CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCCGAGTAGTCCTCGATaGCCAGCACGCCAGACACCT +
Preference number: 4 (lower is better)
Translates to: TSARSSVGADRGRSRLSKPSSPR*PARQTP
Trigger: AGGTGTCTGGCGTGCTGGGCATCGAGGACTACTCGG...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGCTCCGTCTCCTGCTaGTCCAGGTTGTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLGSVSC*SRLSLC
Trigger: GCAGAGTGACAACCTGGAGCAGCAGGAGACGGAGCC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACGAGAGGGGACTGCAGTaGGGATGGCGGCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDERGLQ*GWRLRL
Trigger: GAGACGGAGCCGCCATCCGCACTGCAGTCCCCTCTC...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCAGCCGAGAGGGGACTaGAGTGCGGATGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAAQPRGD*SADGGS
Trigger: GGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTG...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGCAGCCGAGAGGGGACTaGAGTGCGGATGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGQPRGD*SADGGS
Trigger: GGAGCCGCCATCCGCACTGCAGTCCCCTCTCGGCTG...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCTCGTCTGCCACAAGTaGCCGGAGCTCCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAALVCHK*PELRGG
Trigger: GCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAG...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCCGAGGCGGCCCCTGCTaGACGCGGCTCGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATRGGPC*TRLVFL
Trigger: GAGAAAAACGAGCCGCGTGCAGCAGGGGCCGCCTCG...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GAACCTCCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGGGTGCAGGAAGCCCATaGCGGGGCCACGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: EPPLQALAGTGGLLSPLLGAGSP*RGHAPP
Trigger: CGGCGGAGCGTGGCCCCGCCATGGGCTTCCTGCACC...CAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAGGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
CDS-3UTR CCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTAGGGCCTCCAGATGCTaGCGTAGGGCCTCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGRASRC*RRASSS
Trigger: AGAGCTCGAGGCCCTACGCCAGCATCTGGAGGCCCT...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCGGCCAAGAGTGCTTaGGCCGTGCTATTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGAAKSA*AVLLGS
Trigger: GCTGCCCAATAGCACGGCCCAAGCACTCTTGGCCGC...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGGAGTCCGAGCCGTTaGGGGCATCCAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVRSPSR*GHPGPA
Trigger: AGCTGGGCCTGGATGCCCCCAACGGCTCGGACTCCT...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCTGGGGGTGGCGCCTGTaGCGAGGAGTCCGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSWGWRL*RGVRAV
Trigger: AACGGCTCGGACTCCTCGCCACAGGCGCCACCCCCA...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCGCCTGCAGCCTCCGTaGGGGTGGCGCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GSAFGTIRGGNRSDHRAWRLQPP*GWRLWR
Trigger: TCGCCACAGGCGCCACCCCCACGGAGGCTGCAGGCG...CCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp ATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACCGCCTGCAGCCTCCGTaGGGGTGGCGCCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: MAEYRGWRTRSPLVLNLHRLQPP*GWRLWR
Trigger: TCGCCACAGGCGCCACCCCCACGGAGGCTGCAGGCG...GTGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACACCAGTGCAGGCACCCTaGGGCAGTAGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTPVQAP*GSSRAR
Trigger: CCTGGCCCTGCTACTGCCCCAGGGTGCCTGCACTGG...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGGCAGCGTGTCCGGGGTaGCCAGTGCTGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGAACPG*PVLQQR
Trigger: CCTCTGCTGCAGCACTGGCCACCCCGGACACGCTGC...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000614293.4
CDS-3UTR CCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAGCGGCCGCCAGTATTaGGCCCAGGCCGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTSGRQY*AQAASR
Trigger: CCTACTGGCGGCCTGGGCCCAATACTGGCGGCCGCT...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CGCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCCTGCACGTAGCTGCCTaGCTCCACCACATCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RSRVYSCRCSRAVSSSNSLHVAA*LHHIVP
Trigger: GGGCACGATGTGGTGGAGCCAGGCAGCTACGTGCAG...GCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTCTGCACGTAGCTGCCTaGCTCCACCACATCGTGCCC +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGLHVAA*LHHIVP
Trigger: GGGCACGATGTGGTGGAGCCAGGCAGCTACGTGCAG...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGTGTGCTGGATGGTCATaGCCACGGAGTAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGCAGWS*PRSRPR
Trigger: CCTGGGTCTACTCCGTGGCCATGACCATCCAGCACA...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CAGAGCAGGTGCAGCGGACGGGCTCCCGTACCAGGCGCGGCAGGGAGGGTGCCGCCACGATGTGCTGGATaGTCATGGCCACGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QSRCSGRAPVPGAAGRVPPRCAG*SWPRSR
Trigger: TCTACTCCGTGGCCATGACCATCCAGCACATCGTGG...CGGCACCCTCCCTGCCGCGCCTGGTACGGGAGCCCGTCCGCTGCACCTGCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAAGGCCGAGGCCAGCTTaGCCTTGGAGTACAGCACAG +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQRPRPA*PWSTAQ
Trigger: CTGTGCTGTACTCCAAGGCCAAGCTGGCCTCGGCCT...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTGGATGGACATGGTGGTaGTCTTGCCCGCCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPGWTWW*SCPPRC
Trigger: ACAACGGGGCGGGCAAGACCACCACCATGTCCATCC...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGTCGTGCCCGTAGATaGTGGCGGAACCCGACGTTG +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPCRARR*WRNPTL
Trigger: CAACGTCGGGTTCCGCCACCATCTACGGGCACGACA...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTTGTCGTGCCCGTAGATaGTGGCGGAACCCGACGTTG +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLCRARR*WRNPTL
Trigger: CAACGTCGGGTTCCGCCACCATCTACGGGCACGACA...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGATGAACTGGGACACCTaGAGCTCGGAGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGMNWDT*SSEQLL
Trigger: GAGCAGCTGCTCCGAGCTCCAGGTGTCCCAGTTCAT...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGTGCTTGCGGATGAACTaGGACACCTGGAGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGCLRMN*DTWSSE
Trigger: CTCCGAGCTCCAGGTGTCCCAGTTCATCCGCAAGCA...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CACTCGCCAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAAGCGATGCCTGCGACTaGGTCAGCTCCGAGCACCGG +
Preference number: 4 (lower is better)
Translates to: HSPGRTPRHRRSTARIRPSDACD*VSSEHR
Trigger: CCGGTGCTCGGAGCTGACCCAGTCGCAGGCATCGCT...TGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTGGCGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTAGCTTGCGGCTGCCCTaGCCGACCCTCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLSLRLP*PTLDRA
Trigger: GGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCT...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCAGCAGCCCGTGGAACTaGCGCACCTTCAGCCACCCG +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATSSPWN*RTFSHP
Trigger: CGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCT...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTTGACCAGCAGCCCGTaGAACTGGCGCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPLTSSP*NWRTFS
Trigger: GCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAA...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGGCTGGCAGCAAGATCTaGGAGAAGAGTGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAAGSKI*EKSALE
Trigger: CTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGC...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: VENLGSPAHRDLPHHGWGVLTSC*GLASGD
Trigger: ATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCAC...GCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGVLTSC*GLASGD
Trigger: ATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCAC...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTTGCTCAGGTTCAACGTaGGCCCCAGCGAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGCSGST*APASRW
Trigger: CCAACGGCTCGCTGGGGCCCACGTTGAACCTGAGCA...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCTGGGGCGGGCGAGGGTaGGGGTGGCACGAAATTGGA +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVWGGRG*GWHEIG
Trigger: TCCAATTTCGTGCCACCCCCACCCTCGCCCGCCCCA...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTCGCTGGCGAGTCAGATaGGGCGGGCGAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QSRARVYAARAGSAFGTIRWRVR*GGRGWG
Trigger: CCCCCACCCTCGCCCGCCCCATCTGACTCGCCAGCG...AATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp ATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACCGCTGGCGAGTCAGATaGGGCGGGCGAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: MAEYRGWRTRSPLVLNLHRWRVR*GGRGWG
Trigger: CCCCCACCCTCGCCCGCCCCATCTGACTCGCCAGCG...GTGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGACTCATCCGGGGACGCTaGCGAGTCAGATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: APRSSAPWVGPWCQMRLGLIRGR*RVRWGG
Trigger: CCCGCCCCATCTGACTCGCCAGCGTCCCCGGATGAG...TCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGAGCCCGCCCACACTGCTaGGGCAGGAGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGARPHC*GRRSRC
Trigger: GCACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGC...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCGTGACCACCCGCATCTaGGGCGGGTGCCCGCCCACA +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGVTTRI*GGCPPT
Trigger: TGTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCAC...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTCCAGGTCCTCGGGCTCGTCTGCCACAAGTGCCCGGAGCTCCGTGGGGGCAGACCATGGGTGGGGCCCTaGTGCCAAATGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VQVLGLVCHKCPELRGGRPWVGP*CQMRLG
Trigger: TCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGG...TCTGCCCCCACGGAGCTCCGGGCACTTGTGGCAGACGAGCCCGAGGACCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAACGATCTTCCGCACCATaGGTGGGGCCCTGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKRSSAP*VGPWCQ
Trigger: TTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCG...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTACACGTAGGCGGAGCTaGGGACCTCGAACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPTRRRS*GPRTRR
Trigger: CCTTCTGGTTCGAGGTCCCCAGCTCCGCCTACGTGT...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTAGGCTCTGCTGCACCTaGAGCAGCTCCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLRLCCT*SSSFST
Trigger: CGTGCTGAAGGAGCTGCTCCAGGTGCAGCAGAGCCT...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCCAGCCGGCGTCGCCTTaGGCGGTGAGCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSQPASP*AVSSAR
Trigger: CCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTG...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGGGGGGCCAAGCTGGGTaGGAGAGCGATGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGGGQAG*ESDGSW
Trigger: CCAGCTGCCATCGCTCTCCCACCCAGCTTGGCCCCC...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR CCA 90 bp ACAGGGCATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAAGGCAGGGCGGCCAGGTaGGTCCGTCCCGCGATTCCG +
Preference number: 4 (lower is better)
Translates to: TGHGRVQGLEDQKPLGPEGRAAR*VRPAIP
Trigger: CGGAATCGCGGGACGGACCCACCTGGCCGCCCTGCC...TTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATGCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTACAGCACCAGGGGGATaGAGATCTCGAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLTAPGG*RSRRPG
Trigger: TCCTGGCCTTCGAGATCTTCATCCCCCTGGTGCTGT...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGACGGCTCCAGGGCTCCTaGCCCTTGTGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGRLQGS*PLWRPD
Trigger: GTCTGGCCTCCACAAGGGTCAGGAGCCCTGGAGCCG...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGCCCGGCGTGCAGGTaGGCTGCTCCAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QSRARVYAARAGSAFGTISPACR*AAPGGQ
Trigger: CTGCCCTCCTGGAGCAGCTCACCTGCACGCCGGGCT...AATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCGACTCTCAGGCACAGTaGGGATCCGGCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSADSQAQ*GSGPAP
Trigger: GGGAGCTGGGCCGGATCCTCACTGTGCCTGAGAGTC...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGTGGGGTTGCTGGTCATaGGGTGCACGAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQWGCWS*GARGGP
Trigger: TGGGCCTCCTCGTGCACCTCATGACCAGCAACCCCA...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGCGTTGGTTTTCTCGGTaGAGCTGGAGTTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGRWFSR*SWSSGG
Trigger: TCCGCCAGAACTCCAGCTTCACCGAGAAAACCAACG...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCAGCCAGGAGCAAGTTaGAGTCGTCCCCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDQPGAS*SRPPPP
Trigger: CGGTGGAGGGGGACGACTTCAACTTGCTCCTGGCTG...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCCTCAATGTACCACGTaGGGATGCCATAGACCACGG +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCPQCTT*GCHRPR
Trigger: CCGTGGTCTATGGCATCCTCACGTGGTACATTGAGG...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGGTGTTCCTCCACCGTaGGCCGGTCAAAGAGCACAT +
Preference number: 4 (lower is better)
Translates to: HKCPELRGGRPGPEQAEQGVPPP*AGQRAH
Trigger: ATGTGCTCTTTGACCGGCTCACGGTGGAGGAACACC...TTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGCATGCTCTTGAGCCGTaGGTAGAACCAGAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGAHALEP*VEPEVF
Trigger: GAACACCTCTGGTTCTACTCACGGCTCAAGAGCATG...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGACTGGGCTCGTCCAGGATaGTGGCGCGAGAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AIFRTMGGALVPNEAGMDWARPG*WRESRP
Trigger: TGGGCGGCTCTCGCGCCATCATCCTGGACGAGCCCA...GTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCCACATGCTTGCGGATaGACTGGGACACCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLPHACG*TGTPGA
Trigger: AGCTCCAGGTGTCCCAGTTCATCCGCAAGCATGTGG...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGCTCCGTGCTTGTGTCTaGGACCAGCAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RTAIFRTMGGALVPNEAGLRACV*DQQAGG
Trigger: GCCTCCTGCCTGCTGGTCTCAGACACAAGCACGGAG...CCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCAGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGG +
Preference number: 4 (lower is better)
Translates to: HGRVQGLEDQKPLGPEPPARLPA*PSPDAG
Trigger: CCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGC...TGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTTGTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGG +
Preference number: 4 (lower is better)
Translates to: VVENLGSPAHRDLPHHGWARLPA*PSPDAG
Trigger: CCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGC...CCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTACAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGGGCAGAGCCCACAGATaGCGCCGACTGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGGRAHR*RRLQRC
Trigger: GCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCC...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGGGCAGAGCCCACAGATaGCGCCGACTGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGGRAHR*RRLQRC
Trigger: GCATCGCTGCAGTCGGCGTCATCTGTGGGCTCTGCC...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTCGCAGTGGAAGCGTTTaGCCAGCAGCCCGTGGAACT +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGRSGSV*PAARGT
Trigger: AGTTCCACGGGCTGCTGGTCAAACGCTTCCACTGCG...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGGTGGTACTGGGAAGGTaGCAGGACCAGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWVVLGR*QDQRGQ
Trigger: CTGCCCCCGCTGGTCCTGTCACCTTCCCAGTACCAC...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCGTTGGCGTAGGGGATaGAATTGCCACGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDRWRRG*NCHGAG
Trigger: CCCAGCCCCGTGGCAATTTCATCCCCTACGCCAACG...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGAAGCGGTCGGAGGTaGAGAGCAGGTACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLGSGRR*RAGTQR
Trigger: TCTCTGAGTACCTGCTCTTCACCTCCGACCGCTTCC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp ACAAGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGGGACGTTTCCAAAGGTaGTGGCCCCATACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TSARSSVGADRGRSRLSKGRFQR*WPHTGA
Trigger: TGCACCGGTATGGGGCCATCACCTTTGGAAACGTCC...CTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCCCACCAGTCCGCGGGTaGCAATGTCCCACTCGAACG +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATPPVRG*QCPTRT
Trigger: CGTTCGAGTGGGACATTGTCACCCGCGGACTGGTGG...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGAGTTGTACTGGCACATaGTGGTCAGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGASCTGT*WSGGSP
Trigger: TGGGCTTCCTCCTGACCATCATGTGCCAGTACAACT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCCGCCGGTCAGCATCTTaGAGGTGCTGGTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATRRSAS*RCWSCP
Trigger: CGGGCAAGACCAGCACCTTCAAGATGCTGACCGGCG...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp ACAGGGCATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAAGGTGCTCCCGGGCCGTaGGCTCGTCGAACAGCGCGT +
Preference number: 4 (lower is better)
Translates to: TGHGRVQGLEDQKPLGPEGAPGP*ARRTAR
Trigger: ACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACC...TTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACAGGCTGGGTACCCAATaGGGGCGATGGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDRLGTQ*GRWPWR
Trigger: TCTCCACGGCCATCGCCCTCATTGGGTACCCAGCCT...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCGACCGTTCACCATaGTGGCCAGCCGCGTGCACA +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPGDRSP*WPAACT
Trigger: TGTGCACGCGGCTGGCCATCATGGTGAACGGTCGCC...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGGGCGACCGTTCACCATaGTGGCCAGCCGCGTGCACA +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGGDRSP*WPAACT
Trigger: TGTGCACGCGGCTGGCCATCATGGTGAACGGTCGCC...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGCGAGATGTGCTCCGACTTaGGCTGGTACTGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: VPGPAGVALGGEQCQAGARCAPT*AGTAPL
Trigger: CAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCT...CGCCCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACGAAGCCCCTTGGTCCTaGACCTCCACTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDEAPWS*TSTPGP
Trigger: AGGGCCTGGAGTGGAGGTTCAGGACCAAGGGGCTTC...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGAAGCCCCTTGGTCCTaGACCTCCACTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ALRTAIFRTMGGALVPNEEAPWS*TSTPGP
Trigger: AGGGCCTGGAGTGGAGGTTCAGGACCAAGGGGCTTC...CTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACCAGCTGGCCCAAGCTaGTGGCTTCCCGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQPAGPS*WLPAGQ
Trigger: CTGTCCTGCGGGAAGCCATCAGCTTGGGCCAGCTGG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGTGGAGTTGGCGTACTaGAGGAAGCCGAACTCGTCT +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGVELAY*RKPNSS
Trigger: AGACGAGTTCGGCTTCCTGCAGTACGCCAACTCCAC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACAGGCGCTCAAGCAGCTaGGTGACCGTGGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDRRSSS*VTVELA
Trigger: CGCCAACTCCACGGTCACGCAGCTGCTTGAGCGCCT...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCTGAGGGCCTCCAGATaGTGGCGTAGGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSLRASR*WRRASS
Trigger: GCTCGAGGCCCTACGCCAGCATCTGGAGGCCCTCAG...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCGGCAGCGACAAGTTTTaGGTCAGGAAACGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGAGSDKF*VRKRQS
Trigger: GCTCTGGCGTTTCCTGACGCAAAACTTGTCGCTGCC...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp CAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCAATCTTCCGGCGTGCAGGTGAGCTaGTCCAGGAGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QDAHPGTGGQRPGYGQSSGVQVS*SRRAGA
Trigger: GGCTCCTGCCCTCCTGGAGCAGCTCACCTGCACGCC...GGAAGATTGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCGCACGCGCAGCAGCCTaGCCACTGCAGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAAARAAA*PLQTAS
Trigger: GGATGCTGTCTGCAGTGGGCAGGCTGCTGCGCGTGC...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGGCATCCAGGCCCAGCTaGTGGGAGACCTTGGCCACG +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGASRPS*WETLAT
Trigger: CGTGGCCAAGGTCTCCCAGCAGCTGGGCCTGGATGC...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000614293.4
CDS-3UTR GCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCATCCCCCAGAAGCGCCTaGAGCCTCCGTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSSPRSA*SLRGGG
Trigger: GCCACCCCCACGGAGGCTGCAGGCGCTTCTGGGGGA...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTGCTGAGCACTGGCCCTaGAGCGTGTCCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSRARVYAARAGSAFGTIAEHWP*SVSGVA
Trigger: GGCCACCCCGGACACGCTGCAGGGCCAGTGCTCAGC...AATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAACCTCCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGCCAGGGAGCTCATGTTaGCCCGCCGCAGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EPPLQALAGTGGLLSPLLPGSSC*PAAAPR
Trigger: CCGAGGCGCTGCGGCGGGGCAACATGAGCTCCCTGG...CAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAGGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCACCAGGGAGCTCATGTTaGCCCGCCGCAGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSPGSSC*PAAAPR
Trigger: CCGAGGCGCTGCGGCGGGGCAACATGAGCTCCCTGG...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTCAATGGTATCCAGCTaGTGCAGGAGGGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRSMVSS*CRRAMP
Trigger: TGGCATGGCCCTCCTGCAGCAGCTGGATACCATTGA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCGGCTCCACCACATCGTaGCCCACAAAAGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCGSTTS*PTKVSM
Trigger: CATCGACACTTTTGTGGGGCACGATGTGGTGGAGCC...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCAGGATGGCGGTGAGTaGTGTCACGGAGATGGACAG +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLQDGGE*CHGDGQ
Trigger: CTGTCCATCTCCGTGACAGCACTCACCGCCATCCTG...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACGGCCACCGCGTAGACTaGCAGGAAGAGCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHGHRVD*QEEPDD
Trigger: ATCATCTGGCTCTTCCTGGCAGTCTACGCGGTGGCC...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR GCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCAGGTGTGCCACTGGATaGCCACGCCGGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATRCATG*PRRPPH
Trigger: ATGAGGTGGCCGGCGTGGGCATCCAGTGGCACACCT...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGAAGAGCACATTGTGCTaGGGGCACATGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRKSTLC*GHMPRF
Trigger: GAACCTGGGCATGTGCCCGCAGCACAATGTGCTCTT...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AGTGCCCGGAGCTCCGTGGGGGCAGACCGGGGCCGGAGCAGGCTGAGCAAGCAGAAGAGCACATTGTGCTaGGGGCACATGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SARSSVGADRGRSRLSKQKSTLC*GHMPRF
Trigger: GAACCTGGGCATGTGCCCGCAGCACAATGTGCTCTT...CTGCTTGCTCAGCCTGCTCCGGCCCCGGTCTGCCCCCACGGAGCTCCGGGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGAAGAGCACATTGTGCTaGGGGCACATGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGKSTLC*GHMPRF
Trigger: GAACCTGGGCATGTGCCCGCAGCACAATGTGCTCTT...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCAGCACCGGGCCAGATTaGCAGCGTGACCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSASTGPD*QRDPPQ
Trigger: CTGGGGAGGGTCACGCTGGCAATCTGGCCCGGTGCT...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGCGCCGACTGCAGCGATaGCTGCGACTGGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGRRLQR*LRLGQL
Trigger: GAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCG...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCGCCGACTGCAGCGATaGCTGCGACTGGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGRRLQR*LRLGQL
Trigger: GAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCG...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGACGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACA +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGRPACG*PGRPST
Trigger: TGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACG...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGAACGGCAGCCGGAACGTaGTCACGAGCTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGTAAGT*SRAAGG
Trigger: GCCCCCAGCAGCTCGTGAGCACGTTCCGGCTGCCGT...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCGGCGCGACTCCCCGCTaGTCAGGTTCAACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGGATPR*SGSTWA
Trigger: GGCCCACGTTGAACCTGAGCAGCGGGGAGTCGCGCC...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGAGGACTCCAGACACATaGTGTCGAAGAACCGAGCCG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRRTPDT*CRRTEP
Trigger: CGGCTCGGTTCTTCGACAGCATGTGTCTGGAGTCCT...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACGAGACGTTCCAGGCCTaGAGGTCCTCATCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDETFQA*RSSSGD
Trigger: GTCCCCGGATGAGGACCTGCAGGCCTGGAACGTCTC...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCGCGCGGCAGGGAGGGTaGCGACGTCCACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSAARQGG*RRPHFW
Trigger: CCAGAAATGTGGACGTCGGCACCCTCCCTGCCGCGC...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGCGCGGCAGGGAGGGTaGCGACGTCCACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPARQGG*RRPHFW
Trigger: CCAGAAATGTGGACGTCGGCACCCTCCCTGCCGCGC...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGACCTGCGCAGAGCAGGTaGAGCGGACGGGCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGPAQSR*SGRAPV
Trigger: TACGGGAGCCCGTCCGCTGCACCTGCTCTGCGCAGG...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAACCTCCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGGGTGCCCGCCCACACTaGTGGGGCAGGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: EPPLQALAGTGGLLSPLLGARPH*WGRRSR
Trigger: CCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACC...CAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAGGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ACAGGGCATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAAGGTGCCCGCCCACACTaGTGGGGCAGGAGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: TGHGRVQGLEDQKPLGPEGARPH*WGRRSR
Trigger: CCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGCACC...TTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCGTAAGCCGCCGGGTTaGCCTTGCTCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDRKPPG*PCSWAG
Trigger: ACCTGCCCAAGAGCAAGGGCAACCCGGCGGCTTACG...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ACAGGGCATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCCCGGAGCACTCGCTaGCGCTCACTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: TGHGRVQGLEDQKPLGPEPRSTR*RSLATS
Trigger: GGACGTGGCCAGTGAGCGGCAGCGAGTGCTCCGGGG...TTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCAGCCGCGTGTACAGCTaGAGGTGCTCCCGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGSRVYS*RCSRAV
Trigger: CACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCT...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCTGCCGCCGCTGTAGGTaGCAGCCGGCTTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSCRRCR*QPACLR
Trigger: ACGCAGACAAGCCGGCTGGCACCTACAGCGGCGGCA...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGTCAGGTGCTGGATGCTaGCCAGGCACCGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGSGAGC*PGTAGD
Trigger: GTCGCCTGCGGTGCCTGGGCAGCATCCAGCACCTGA...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCGAGAGGGGACTGCAGTaGGGATGGCGGCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSERGLQ*GWRLRL
Trigger: GAGACGGAGCCGCCATCCGCACTGCAGTCCCCTCTC...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACTTGGGCGGTGAGCAGTaGCAGGCAGGGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: MAEYRGWRTRSPLVLNLHLGGEQ*QAGARG
Trigger: GCCCCTCGCCCCTGCCTGGCACTGCTCACCGCCCAA...GTGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AGTCTCGTTGGCCTTGAGGATGACGCGGTCGACCTCAGAGCCCGCAGGCGCGTACCAGGGAGCTCATGTTaGCCCGCCGCAGCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: SLVGLEDDAVDLRARRRVPGSSC*PAAAPV
Trigger: AACCGGCGCTGCGGCGGGGCAACATGAGCTCCCTGG...TACGCGCCTGCGGGCTCTGAGGTCGACCGCGTCATCCTCAAGGCCAACGAGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
CDS-3UTR CCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCAGCAGCTGCAGCTaGTGCAGGAAGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVSSSCS*CRKPMA
Trigger: CGCCATGGGCTTCCTGCACCAGCTGCAGCTGCTGCT...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
CDS-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCCTTCACGGAGATGGTaGGCTTCTTCTGTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLPSRRW*ASSVAA
Trigger: GGCTGCGACAGAAGAAGCCCACCATCTCCGTGAAGG...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGCCGAACTCGTCTCGCTaGCCGTCCGGGCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWPNSSR*PSGHSD
Trigger: ATCGCTGTGCCCGGACGGCCAGCGAGACGAGTTCGG...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCAGGGCCTCCAGATGCTaGCGTAGGGCCTCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATRASRC*RRASSS
Trigger: AGAGCTCGAGGCCCTACGCCAGCATCTGGAGGCCCT...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGTCCAGGCCCAGCTGCTaGGAGACCTTGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGSRPSC*ETLATS
Trigger: GGACGTGGCCAAGGTCTCCCAGCAGCTGGGCCTGGA...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGAGGAGTCCGAGCCGTTaGGGGCATCCAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPRSPSR*GHPGPA
Trigger: AGCTGGGCCTGGATGCCCCCAACGGCTCGGACTCCT...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCACAGCCTCCGTGGGGGTaGCGCCTGTGGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSQPPWG*RLWRGV
Trigger: GACTCCTCGCCACAGGCGCCACCCCCACGGAGGCTG...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCACTGCCCCAGTGCCATTaGCCGCCCCACCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSLPQCH*PPHPHH
Trigger: GTGGTGCGGGTGGGGCGGCCAATGGCACTGGGGCAG...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TGTCCTGTCTCAGGGCCGGCGGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGCAGCGTGTCCGGGGTaGCCAGTGCTGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CPVSGPAAAHPVTGSVPRAACPG*PVLQQR
Trigger: CCTCTGCTGCAGCACTGGCCACCCCGGACACGCTGC...CCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCCTGAGACAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
CDS-3UTR CCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGACGAAGGCTGAGCACTaGCCCTGCAGCGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGTKAEH*PCSVSG
Trigger: CCCGGACACGCTGCAGGGCCAGTGCTCAGCCTTCGT...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCGGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGGTGCAGCCGCAGCTCTACGAAGGCTGAGCACTaGCCCTGCAGCGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GGSSSSDRFSASGCSRSSTKAEH*PCSVSG
Trigger: CCCGGACACGCTGCAGGGCCAGTGCTCAGCCTTCGT...AGAGCTGCGGCTGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
CDS-3UTR CCA 90 bp GGGCCGGCGGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGGTGCAGCCGCATGTTGCCACACAAGATaGGCTGCAGGCCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GPAAAHPVTGSVPRGAAACCHTR*AAGRPR
Trigger: TCTGGGCCGGCCTGCAGCCCATCTTGTGTGGCAACA...TGCGGCTGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
CDS-3UTR CCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGAAGCGGCCGCCAGTATTaGGCCCAGGCCGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGSGRQY*AQAASR
Trigger: CCTACTGGCGGCCTGGGCCCAATACTGGCGGCCGCT...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGTGCTGGATGGTCATaGCCACGGAGTAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPCAGWS*PRSRPR
Trigger: CCTGGGTCTACTCCGTGGCCATGACCATCCAGCACA...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCCCACGATGTGCTGGATaGTCATGGCCACGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGAPRCAG*SWPRSR
Trigger: TCTACTCCGTGGCCATGACCATCCAGCACATCGTGG...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CGCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCTCCGCCACGATGTGCTaGATGGTCATGGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: RSRVYSCRCSRAVSSSNSSATMC*MVMATE
Trigger: CTCCGTGGCCATGACCATCCAGCACATCGTGGCGGA...GCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GTCGGTCAGGATGTCGCCTGTGACCACCCGCATCTGGGGCGGGTGCCCGCCCACGTGCTGTCACGGAGATaGACAGCTGCACAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: VGQDVACDHPHLGRVPAHVLSRR*TAAQSR
Trigger: CCGGCTTTGTGCAGCTGTCCATCTCCGTGACAGCAC...GTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCACAGGCGACATCCTGACCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR CCA 90 bp CTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAGGCCAGCTTGGCCTTaGAGTACAGCACAGACACCA +
Preference number: 4 (lower is better)
Translates to: LGSPAHRDLPHHGWGPGARPAWP*STAQTP
Trigger: TGGTGTCTGTGCTGTACTCCAAGGCCAAGCTGGCCT...GGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGAGGCCAGCTTGGCCTTaGAGTACAGCACAGACACCA +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRRPAWP*STAQTP
Trigger: TGGTGTCTGTGCTGTACTCCAAGGCCAAGCTGGCCT...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACTGAAGGTGTGCCACTaGATGCCCACGCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQLKVCH*MPTPAT
Trigger: GGTGGCCGGCGTGGGCATCCAGTGGCACACCTTCAG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CGCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCGTAGGACTTCTGCAGTaGGAAGTACCAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RSRVYSCRCSRAVSSSNSVGLLQ*EVPGPG
Trigger: CCCCGGCCCTGGTACTTCCCACTGCAGAAGTCCTAC...GCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479446.5
CDS-3UTR CCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCAGCGCCGGCTCTCCATaGCACAGGCCTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSASAGSP*HRPGPP
Trigger: AGGAGGACCAGGCCTGTGCCATGGAGAGCCGGCGCT...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAGCGCCGGCTCTCCATaGCACAGGCCTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTSAGSP*HRPGPP
Trigger: AGGAGGACCAGGCCTGTGCCATGGAGAGCCGGCGCT...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGAGCGCCGGCTCTCCATaGCACAGGCCTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGSAGSP*HRPGPP
Trigger: AGGAGGACCAGGCCTGTGCCATGGAGAGCCGGCGCT...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACTTGCCCGCCCCGTTGTaGCCCAAGAAGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDLPAPL*PKKETT
Trigger: GGTGGTCTCCTTCTTGGGCCACAACGGGGCGGGCAA...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGGTGAGTGCCGTTTGTTaGAGAGCTCCAGGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGVSAVC*RAPGPR
Trigger: TCGAGGACCTGGAGCTCTCCAACAAACGGCACTCAC...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCGTGAGTGCCGTTTGTTaGAGAGCTCCAGGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PGQPCAPRSSAPWVGPWCVSAVC*RAPGPR
Trigger: TCGAGGACCTGGAGCTCTCCAACAAACGGCACTCAC...GCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTATGAACTGGGACACCTaGAGCTCGGAGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPMNWDT*SSEQLL
Trigger: GAGCAGCTGCTCCGAGCTCCAGGTGTCCCAGTTCAT...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CGCAGCCGCGTGTACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCTCTTGGCGGCCTCGCTaGGCAGGATGTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RSRVYSCRCSRAVSSSNSSWRPR*AGCRRA
Trigger: AGCTCTCCTACATCCTGCCCAGCGAGGCCGCCAAGA...GCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTACACGCGGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp GCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGACGAAAGCCCCCTTCTTaGCGGCCTCGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: APRSSAPWVGPWCQMRLGRKPPS*RPRWAG
Trigger: TCCTGCCCAGCGAGGCCGCCAAGAAGGGGGCTTTCG...TCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCCTGCGCTCCAGGTGCTaGAAGAGGCGCTCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVLRSRC*KRRSKA
Trigger: GGCTTTCGAGCGCCTCTTCCAGCACCTGGAGCGCAG...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAAGCGATGCCTGCGACTaGGTCAGCTCCGAGCACCGG +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQSDACD*VSSEHR
Trigger: CCGGTGCTCGGAGCTGACCCAGTCGCAGGCATCGCT...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAGCGATGCCTGCGACTaGGTCAGCTCCGAGCACCGG +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTSDACD*VSSEHR
Trigger: CCGGTGCTCGGAGCTGACCCAGTCGCAGGCATCGCT...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTTGTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGAGCTTGCGGCTGCCCTaGCCGACCCTCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: VVENLGSPAHRDLPHHGWSLRLP*PTLDRA
Trigger: GGCCCTGTCGAGGGTCGGCCAGGGCAGCCGCAAGCT...CCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTACAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGAGCAGCCCGTGGAACTaGCGCACCTTCAGCCACCCG +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGSSPWN*RTFSHP
Trigger: CGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCT...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGAGCAGCCCGTGGAACTaGCGCACCTTCAGCCACCCG +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWSSPWN*RTFSHP
Trigger: CGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCT...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGGCTGGCAGCAAGATCTaGGAGAAGAGTGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRAGSKI*EKSALE
Trigger: CTCCAAGGCACTCTTCTCCCAGATCTTGCTGCCAGC...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAAACAGGGCCACGGTCATaGCCACGCAGACGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GSPAHRDLPHHGWGPGAKTGPRS*PRRRRR
Trigger: CCTTCTTCGTCTGCGTGGCCATGACCGTGGCCCTGT...TTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp GAACCTCCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGCGAGCTGCTGGGGGCTaGCGTCGGGCGATAGCCGCA +
Preference number: 4 (lower is better)
Translates to: EPPLQALAGTGGLLSPLLRAAGG*RRAIAA
Trigger: TGCGGCTATCGCCCGACGCCAGCCCCCAGCAGCTCG...CAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAGGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLVLTSC*GLASGD
Trigger: ATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCAC...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCGTGCTCACGAGCTGCTaGGGGCTGGCGTCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGVLTSC*GLASGD
Trigger: ATCGCCCGACGCCAGCCCCCAGCAGCTCGTGAGCAC...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGGGGTGGCACGAAATTaGACAGTGGCAGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGGVARN*TVAAPV
Trigger: CACAGGGGCTGCCACTGTCCAATTTCGTGCCACCCC...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGTGGGGCGGGCGAGGGTaGGGGTGGCACGAAATTGGA +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPWGGRG*GWHEIG
Trigger: TCCAATTTCGTGCCACCCCCACCCTCGCCCGCCCCA...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCTGGGGCGGGCGAGGGTaGGGGTGGCACGAAATTGGA +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSWGGRG*GWHEIG
Trigger: TCCAATTTCGTGCCACCCCCACCCTCGCCCGCCCCA...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGACTCATCCGGGGACGCTaGCGAGTCAGATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGLIRGR*RVRWGG
Trigger: CCCGCCCCATCTGACTCGCCAGCGTCCCCGGATGAG...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGTTTCTGGCCCAGCGGTaGGCGGCAGGGAGACGTTCC +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPFLAQR*AAGRRS
Trigger: GGAACGTCTCCCTGCCGCCCACCGCTGGGCCAGAAA...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGTTTCTGGCCCAGCGGTaGGCGGCAGGGAGACGTTCC +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWFLAQR*AAGRRS
Trigger: GGAACGTCTCCCTGCCGCCCACCGCTGGGCCAGAAA...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp TACAGCTGCAGGTGCTCCCGGGCCGTGAGCTCGTCGAACAGCGCGTCACACTGCCGACGTCCACATTTCTaGCCCAGCGGTGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: YSCRCSRAVSSSNSASHCRRPHF*PSGGRQ
Trigger: CTGCCGCCCACCGCTGGGCCAGAAATGTGGACGTCG...GCAGTGTGACGCGCTGTTCGACGAGCTCACGGCCCGGGAGCACCTGCAGCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR CCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCAGCCCGCCCACACTGCTaGGGCAGGAGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSARPHC*GRRSRC
Trigger: GCACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGC...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp ACAGGGCATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAAGCCCGCCCACACTGCTaGGGCAGGAGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TGHGRVQGLEDQKPLGPEARPHC*GRRSRC
Trigger: GCACCGGCTTCTCCTGCCCCAGCAGTGTGGGCGGGC...TTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GTTGTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGTGACCACCCGCATCTaGGGCGGGTGCCCGCCCACA +
Preference number: 4 (lower is better)
Translates to: VVENLGSPAHRDLPHHGWVTTRI*GGCPPT
Trigger: TGTGGGCGGGCACCCGCCCCAGATGCGGGTGGTCAC...CCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTACAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTGGGAGAGGCTGGCGCTaGTCTTATTCATGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPGRGWR*SYSWGG
Trigger: ACCACCCCATGAATAAGACCAGCGCCAGCCTCTCCC...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGCAAACTGCAGGTGCTTaGCCTTGGTGGACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRQTAGA*PWWTSR
Trigger: CCGAGAAGTCCACCAAGGCCAAGCACCTGCAGTTTG...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGCGGCAGGGAAGTTGGTaGGCGACGTGTAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGRQGSW*ATCRPA
Trigger: TGCCGGCCTACACGTCGCCCACCAACTTCCCTGCCG...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACGGCAGGGAAGTTGGTaGGCGACGTGTAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQRQGSW*ATCRPA
Trigger: TGCCGGCCTACACGTCGCCCACCAACTTCCCTGCCG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCGGCAGGGAAGTTGGTaGGCGACGTGTAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGRQGSW*ATCRPA
Trigger: TGCCGGCCTACACGTCGCCCACCAACTTCCCTGCCG...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCCGGCAGGGAAGTTGGTaGGCGACGTGTAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSARQGSW*ATCRPA
Trigger: TGCCGGCCTACACGTCGCCCACCAACTTCCCTGCCG...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTACGTCCTTCACACTCTaGCTGCTCTTGGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPTSFTL*LLLVRT
Trigger: GGTGCGGACCAAGAGCAGCCAGAGTGTGAAGGACGT...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTACGTCCTTCACACTCTaGCTGCTCTTGGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLTSFTL*LLLVRT
Trigger: GGTGCGGACCAAGAGCAGCCAGAGTGTGAAGGACGT...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCGGACTGCAGTGCGGATaGCGGCTCCGTCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSAGLQCG*RLRLLL
Trigger: CAGCAGGAGACGGAGCCGCCATCCGCACTGCAGTCC...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAAAGGCCAGCAGTGCCTaGTCCAGCCGGCGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQKASSA*SSRRRL
Trigger: AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTT...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR CCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACGTCTGGCCCCTTGCCTaGCCAGCAGGGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDVWPLA*PAGSAS
Trigger: AGAAGCTGACCCTGCTGGCCAGGCAAGGGGCCAGAC...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
3UTR CAA 72 bp GGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTaGGCACAATTAGGGGCGGCAACCGCAGTGACCACA +
Preference number: 4 (lower is better)
Translates to: GQGCTQPGPGQP*AQLGAATAVTT
Trigger: TGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGGGCACAGCGATTGCATaGCAGGCAGGATGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGGTAIA*QAGCRQ
Trigger: CTGCCGGCATCCTGCCTGTCATGCAATCGCTGTGCC...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000614293.4
CDS-3UTR TCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCGCTCAAGCAGCTGCGTaGCCGTGGAGTTGGCGTACT +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVAQAAA*PWSWRT
Trigger: AGTACGCCAACTCCACGGTCACGCAGCTGCTTGAGC...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCTCAAGCAGCTGCGTaGCCGTGGAGTTGGCGTACT +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATAQAAA*PWSWRT
Trigger: AGTACGCCAACTCCACGGTCACGCAGCTGCTTGAGC...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATGGGGTTGCTGGTCATaGGGTGCACGAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQWGCWS*GARGGP
Trigger: TGGGCCTCCTCGTGCACCTCATGACCAGCAACCCCA...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCGCTCACCTTGGACATaGACTGGATCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AARAGSAFGTIRGGNRSDRSPWT*TGSSRR
Trigger: CCTGCGGCTGGATCCAGTTCATGTCCAAGGTGAGCG...GTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCCGCTCACCTTGGACATaGACTGGATCCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVRSPWT*TGSSRR
Trigger: CCTGCGGCTGGATCCAGTTCATGTCCAAGGTGAGCG...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTACTTCAGGATGGCGGTaGGTGCTGTCACGGAGATGG +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGTSGWR*VLSRRW
Trigger: CCATCTCCGTGACAGCACTCACCGCCATCCTGAAGT...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCTCAGGAAGTAGATaGTGCCACCGCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVSSGSR*CHRRPR
Trigger: CCTCGGCCTGCGGTGGCATCATCTACTTCCTGAGCT...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTGAGCAGTGCCAGGCAGGGACTTCTCGAAGGCCGTaGTCTTATCATGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: AVPGPAGVALGGEQCQAGTSRRP*SYHAPP
Trigger: AGGTGGCGCATGATAAGATCACGGCCTTCGAGAAGT...CCCTGCCTGGCACTGCTCACCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCCCACCGGGGACTGGCTaGAGGTGTGCCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGPPGTG*RCATGC
Trigger: GCATCCAGTGGCACACCTTCAGCCAGTCCCCGGTGG...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTCCTCAATGTACCACGTaGGGATGCCATAGACCACGG +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPPQCTT*GCHRPR
Trigger: CCGTGGTCTATGGCATCCTCACGTGGTACATTGAGG...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCTTGTACTTCAGGATaGGGTCCCAGATGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATACTSG*GPRWRG
Trigger: GCCGCGCCATCTGGGACCTCATCCTGAAGTACAAGC...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp CATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACGCCATAGGTGCCCTTaGGGAAGAGCGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: HGRVQGLEDQKPLGPEPPRHRCP*GRAGSR
Trigger: GCGGCTCCCCGCTCTTCCTCAAGGGCACCTATGGCG...TGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GTTGTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGCGCCATAGGTGCCCTTaGGGAAGAGCGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VVENLGSPAHRDLPHHGWRHRCP*GRAGSR
Trigger: GCGGCTCCCCGCTCTTCCTCAAGGGCACCTATGGCG...CCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTACAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp ATAAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTGCCAGATTGCCAGCGTaGCCCTCCCCAGACGCCGGG +
Preference number: 4 (lower is better)
Translates to: INTGLTQLRPQPALGISLARLPA*PSPDAG
Trigger: CCCGGCGTCTGGGGAGGGTCACGCTGGCAATCTGGC...AAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTGTGGTACTGGGAAGGTaGCAGGACCAGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLVVLGR*QDQRGQ
Trigger: CTGCCCCCGCTGGTCCTGTCACCTTCCCAGTACCAC...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCCGTTGGCGGGAGACTTaGGCACGCAGGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGRWRET*ARRWHP
Trigger: TGGGTGCCACCTGCGTGCTCAAGTCTCCCGCCAACG...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGGAAGCGGTCGGAGGTaGAGAGCAGGTACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGGSGRR*RAGTQR
Trigger: TCTCTGAGTACCTGCTCTTCACCTCCGACCGCTTCC...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR TCA 90 bp CCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCTGTAGGCCATCTCCATaGGCCCGTGGCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PRGFKAKQGKGVRSPGRVCRPSP*ARGPGC
Trigger: ACAACCTGGGCCACGGGCTCATGGAGATGGCCTACA...GACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCCCACCAGTCCGCGGGTaGCAATGTCCCACTCGAACG +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSAPPVRG*QCPTRT
Trigger: CGTTCGAGTGGGACATTGTCACCCGCGGACTGGTGG...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGAGGCTGGGTACCCAATaGGGGCGATGGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGRLGTQ*GRWPWR
Trigger: TCTCCACGGCCATCGCCCTCATTGGGTACCCAGCCT...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR TCA 90 bp GCGTTTGACCAGCAGCCCGTGGAACTGGCGCACCTTCAGCCACCCGCCGTCCAGCCGGGAAGTTGCGGTTaGAGAACCGCACCACGTCCT +
Preference number: 4 (lower is better)
Translates to: AFDQQPVELAHLQPPAVQPGSCG*RTAPRP
Trigger: AGGACGTGGTGCGGTTCTTCAACCGCAACTTCCCGG...CTGGACGGCGGGTGGCTGAAGGTGCGCCAGTTCCACGGGCTGCTGGTCAAACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487109.5
CDS-3UTR TCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGAGATGTGCTCCGACTTaGGCTGGTACTGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRRCAPT*AGTAPL
Trigger: CAAAGGTGCAGTACCAGCTCAAGTCGGAGCACATCT...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGAGGCGCTCAAGCAGCTaGGTGACCGTGGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPRRSSS*VTVELA
Trigger: CGCCAACTCCACGGTCACGCAGCTGCTTGAGCGCCT...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAGGCGCTCAAGCAGCTaGGTGACCGTGGAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTRRSSS*VTVELA
Trigger: CGCCAACTCCACGGTCACGCAGCTGCTTGAGCGCCT...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCACGGGCGGCCAAGAGTaGTTGGGCCGTGCTATTGGG +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAATGGQE*LGRAIG
Trigger: CCCAATAGCACGGCCCAAGCACTCTTGGCCGCCCGT...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCACGGGCGGCCAAGAGTaGTTGGGCCGTGCTATTGGG +
Preference number: 4 (lower is better)
Translates to: GPGRPRGFKAKQGKGVRSTGGQE*LGRAIG
Trigger: CCCAATAGCACGGCCCAAGCACTCTTGGCCGCCCGT...GCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCAGGCGTGCAGGTGAGCTaGTCCAGGAGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSGVQVS*SRRAGA
Trigger: GGCTCCTGCCCTCCTGGAGCAGCTCACCTGCACGCC...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGCAGCAGCCTGCCCACTaGAGACAGCATCCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGQQPAH*RQHPGS
Trigger: GCTACCGGGATGCTGTCTGCAGTGGGCAGGCTGCTG...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGCAGCAGCCTGCCCACTaGAGACAGCATCCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPQQPAH*RQHPGS
Trigger: GCTACCGGGATGCTGTCTGCAGTGGGCAGGCTGCTG...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTGCACGCGCAGCAGCCTaGCCACTGCAGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: GFKAKQGKGVRSPGRVSLARAAA*PLQTAS
Trigger: GGATGCTGTCTGCAGTGGGCAGGCTGCTGCGCGTGC...AAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAACCTCCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGGCCCATGACTGCCCCTaGCCCAGTGCCATTGGCCGC +
Preference number: 4 (lower is better)
Translates to: EPPLQALAGTGGLLSPLLAHDCP*PSAIGR
Trigger: GCGGCCAATGGCACTGGGGCAGGGGCAGTCATGGGC...CAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACTGCTGCAGCAGAGGGTaGGCCCTCCTCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: MAEYRGWRTRSPLVLNLHCCSRG*ALLSGG
Trigger: GCCACCGCTGAGGAGGGCGCACCCTCTGCTGCAGCA...GTGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCCACACAAGATGGGCTaGAGGCCGGCCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAAPHKMG*RPAQSC
Trigger: ACAGCTCTGGGCCGGCCTGCAGCCCATCTTGTGTGG...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGCCACACAAGATGGGCTaGAGGCCGGCCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPPHKMG*RPAQSC
Trigger: ACAGCTCTGGGCCGGCCTGCAGCCCATCTTGTGTGG...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAAGGCCCAGGTTCCGCTaGTCCTTGCTCGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQRPRFR*SLLVKP
Trigger: GGGCTTCACGAGCAAGGAGCAGCGGAACCTGGGCCT...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGAGGCCCAGGTTCCGCTaGTCCTTGCTCGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGRPRFR*SLLVKP
Trigger: GGGCTTCACGAGCAAGGAGCAGCGGAACCTGGGCCT...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000614293.4
CDS-3UTR GCA 90 bp CTGCCCTGCTCCAGGAAGCTGCGGATCTCCGCCGAGATGTTGAGCCAGACCTGGCAGCGCAGGTGTTGCTaGAGCCTGCCCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPCSRKLRISAEMLSQTWQRRCC*SLPCSR
Trigger: CCTGGAGCAGGGCAGGCTGCAGCAACACCTGCGCTG...CCAGGTCTGGCTCAACATCTCGGCGGAGATCCGCAGCTTCCTGGAGCAGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470535.2
CDS-3UTR GCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCTGCTACATACTGCTaGAGCCAGCGCAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPSATYC*SQRRCC
Trigger: GCAACACCTGCGCTGGCTGCAGCAGTATGTAGCAGA...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGCGGCAGCTCATCCAGTGACAGGTTCAGTGCCTCGGGGTGCAGCCGCAATGGTATCCAGCTGCTaGAGGAGGGCCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GPAAAHPVTGSVPRGAAAMVSSC*RRAMPL
Trigger: CAGTGGCATGGCCCTCCTGCAGCAGCTGGATACCAT...TGCGGCTGCACCCCGAGGCACTGAACCTGTCACTGGATGAGCTGCCGCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470535.2
CDS-3UTR GCA 90 bp TCCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTACATCTGCACGTAGCTaGCTGGCTCCACCACATCGT +
Preference number: 4 (lower is better)
Translates to: SEAGQEKGQQCLVQPASPTSARS*LAPPHR
Trigger: ACGATGTGGTGGAGCCAGGCAGCTACGTGCAGATGT...AGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTCCCAGGAGATCACCATaGACAGCGGCATCATGTGCT +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLPRRSP*TAASCA
Trigger: AGCACATGATGCCGCTGTGCATGGTGATCTCCTGGG...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGACCTCCTTGAGCCGGTaGTCCTTCTCCGCCACGATG +
Preference number: 4 (lower is better)
Translates to: RTAIFRTMGGALVPNEAGTSLSR*SFSATM
Trigger: CATCGTGGCGGAGAAGGAGCACCGGCTCAAGGAGGT...CCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCAACCAGGCCACCCAGTaGACCGCGTTGTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSANQATQ*TALFRP
Trigger: GGGCCTGAACAACGCGGTGCACTGGGTGGCCTGGTT...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCAACCAGGCCACCCAGTaGACCGCGTTGTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRADPEALRQSRARVYAANQATQ*TALFRP
Trigger: GGGCCTGAACAACGCGGTGCACTGGGTGGCCTGGTT...GGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGAGGCCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGCCGTGATCTTATCATaGGCCACCTCCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: PRPGRRKASSAWSSRRRLAVILS*ATSSRI
Trigger: GATCCGAGAGGAGGTGGCGCATGATAAGATCACGGC...AAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGGCCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAAGGTGTGCCACTGGATaGCCACGCCGGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQRCATG*PRRPPH
Trigger: ATGAGGTGGCCGGCGTGGGCATCCAGTGGCACACCT...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGAGGTGTGCCACTGGATaGCCACGCCGGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGRCATG*PRRPPH
Trigger: ATGAGGTGGCCGGCGTGGGCATCCAGTGGCACACCT...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCAGGTGTGCCACTGGATaGCCACGCCGGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: VENLGSPAHRDLPHHGWGRCATG*PRRPPH
Trigger: ATGAGGTGGCCGGCGTGGGCATCCAGTGGCACACCT...GCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGAGGTGTGCCACTGGATaGCCACGCCGGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGRCATG*PRRPPH
Trigger: ATGAGGTGGCCGGCGTGGGCATCCAGTGGCACACCT...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGGGCAGACCCCGAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGACTGGCTGAAGGTGTaGCACTGGATGCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: PGRPRGFKAKQGKGVRSPDWLKV*HWMPTP
Trigger: CGGCGTGGGCATCCAGTGGCACACCTTCAGCCAGTC...CGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTCGGGGTCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCGACTGGCTGAAGGTGTaGCACTGGATGCCCACGCCG +
Preference number: 4 (lower is better)
Translates to: VENLGSPAHRDLPHHGWGDWLKV*HWMPTP
Trigger: CGGCGTGGGCATCCAGTGGCACACCTTCAGCCAGTC...GCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGTGGGCTCCTCCTCCATaGCACGGGTCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RTAIFRTMGGALVPNEAGWAPPP*HGSPQS
Trigger: GCTTTGAGGAGACCCGTGGCATGGAGGAGGAGCCCA...CCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCGGGCAGGAGAAAGGCCAGCAGTGCCTGGTCCAGCCGGCGTCGCCTTGGGCGGTCTTGTCCATCTCTCTaGGGATCTCCTCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PGRRKASSAWSSRRRLGRSCPSL*GSPPEP
Trigger: TGGCTCAGGAGGAGATCCGCAGAGAGATGGACAAGA...CCGCCCAAGGCGACGCCGGCTGGACCAGGCACTGCTGGCCTTTCTCCTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CACTCGCCAGGACGCACACCCAGGCACAGGCGGTCAACGGCCAGGATACGGCCATGGCCACGGACAGCTTaGGCTTCATGCCACCCGACA +
Preference number: 4 (lower is better)
Translates to: HSPGRTPRHRRSTARIRPWPRTA*ASCHPT
Trigger: TGTCGGGTGGCATGAAGCGCAAGCTGTCCGTGGCCA...TGGCCGTATCCTGGCCGTTGACCGCCTGTGCCTGGGTGTGCGTCCTGGCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479446.5
ENST00000487109.5
CDS-3UTR GCA 90 bp GGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCTGGCCACGGACAGCTTaGGCTTCATGCCACCCGACA +
Preference number: 4 (lower is better)
Translates to: GCTQPGPGQPLAQLGAATWPRTA*ASCHPT
Trigger: TGTCGGGTGGCATGAAGCGCAAGCTGTCCGTGGCCA...GGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTAGGCAGGAGGCCACATaGTTGCGGATGAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: NLGSPAHRDLPHHGWGPGRQEAT*LRMNWD
Trigger: GTCCCAGTTCATCCGCAAGCATGTGGCCTCCTGCCT...ACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGGCAGTGCATCCAGGCTaGGCTCCAGGTGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTAIFRTMGGALVPNEAGAVHPG*APGAGR
Trigger: TCTTCCAGCACCTGGAGCGCAGCCTGGATGCACTGC...CCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGCCGAAGCTGCTGAGGTaGAGTGCATCCAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWPKLLR*SASRLR
Trigger: GCGCAGCCTGGATGCACTGCACCTCAGCAGCTTCGG...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGACCGCCGACTGCAGCGATaGCTGCGACTGGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AIFRTMGGALVPNEAGMDRRLQR*LRLGQL
Trigger: GAGCTGACCCAGTCGCAGGCATCGCTGCAGTCGGCG...GTCCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACACCTCGACAGGGCCTCTaGCTCCACCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTPRQGL*LHLLQA
Trigger: AGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGG...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAGGCTTTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCCCTCGACAGGGCCTCTaGCTCCACCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EALRQSRARVYAARAGSAPRQGL*LHLLQA
Trigger: AGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGG...GGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAAAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAACCTCGACAGGGCCTCTaGCTCCACCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQPRQGL*LHLLQA
Trigger: AGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGG...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp AAACATCTGTGCGCTATGTACAGGCCCGGCTCCCAGGGAGGTGGGCGGGCAGGGCCTCGACAGGGCCTCTaGCTCCACCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KHLCAMYRPGSQGGGRAGPRQGL*LHLLQA
Trigger: AGCCTGCAAGAGGTGGAGGCAGAGGCCCTGTCGAGG...CCCTGCCCGCCCACCTCCCTGGGAGCCGGGCCTGTACATAGCGCACAGATGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ACAGGGCATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACA +
Preference number: 4 (lower is better)
Translates to: TGHGRVQGLEDQKPLGPERPACG*PGRPST
Trigger: TGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACG...TTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATGCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACGTCCAGCTTGCGGCTaGCCTGGCCGACCCTCGACA +
Preference number: 4 (lower is better)
Translates to: HGRVQGLEDQKPLGPEPPRPACG*PGRPST
Trigger: TGTCGAGGGTCGGCCAGGGCAGCCGCAAGCTGGACG...TGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp CCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGCTGGGATGGAGAGTGCCTTGGAGTTaGGGCGGGCGCAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PRSSAPWVGPWCQMRLGWRVPWS*GGRSGS
Trigger: GCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCT...CCATCCCAGCCTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp GGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAAAGAGTGCCTTGGAGTTaGGGCGGGCGCAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GKAGQGCTQPGPGQPLAQRVPWS*GGRSGS
Trigger: GCTTCCACTGCGCCCGCCGCAACTCCAAGGCACTCT...TTGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCCCTGGTGCCAAATGAGGATCTGGGAGAAGAGTaGCTTGGAGTTGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ALRTAIFRTMGGALVPNEDLGEE*LGVAAG
Trigger: GCCCGCCGCAACTCCAAGGCACTCTTCTCCCAGATC...CTCATTTGGCACCAGGGCCCCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp AAATACGGGACTGACCCAGCTCCGCCCACAGCCCGCTCTCGGCATCAGCCTTCAGGCGCGACTCCCCGCTaGTCAGGTTCAACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KYGTDPAPPTARSRHQPSGATPR*SGSTWA
Trigger: GGCCCACGTTGAACCTGAGCAGCGGGGAGTCGCGCC...TGAAGGCTGATGCCGAGAGCGGGCTGTGGGCGGAGCTGGGTCAGTCCCGTATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GTTGTAGAAAACCTGGGCAGCCCTGCGCACCGCGATCTTCCGCACCATGGGTGGGGCGCGACTCCCCGCTaGTCAGGTTCAACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVENLGSPAHRDLPHHGWGATPR*SGSTWA
Trigger: GGCCCACGTTGAACCTGAGCAGCGGGGAGTCGCGCC...CCACCCATGGTGCGGAAGATCGCGGTGCGCAGGGCTGCCCAGGTTTTCTACAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487109.5
ENST00000488535.2
CDS-3UTR GCA 90 bp AGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCACAGAGACGTTCCAGGCCTaGAGGTCCTCATCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RQSRARVYAARAGSAFGTETFQA*RSSSGD
Trigger: GTCCCCGGATGAGGACCTGCAGGCCTGGAACGTCTC...TGTGCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp TTAAGGCAAAGCAGGGCAAGGGTGTACGCAGCCCGGGCCGGGTCAGCCTTTGGCGCGCGGCAGGGAGGGTaGCGACGTCCACATTTCTGG +
Preference number: 4 (lower is better)
Translates to: LRQSRARVYAARAGSAFGARQGG*RRPHFW
Trigger: CCAGAAATGTGGACGTCGGCACCCTCCCTGCCGCGC...GCCAAAGGCTGACCCGGCCCGGGCTGCGTACACCCTTGCCCTGCTTTGCCTTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GAACCTCCACTCCAGGCCCTGGCAGGCACTGGGGGACTTCTGTCCCCATTGTTGGGCAGGAGAAGCCGGTaGCCTGCGCAGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EPPLQALAGTGGLLSPLLGRRSR*PAQSRC
Trigger: GCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCC...CAACAATGGGGACAGAAGTCCCCCAGTGCCTGCCAGGGCCTGGAGTGGAGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATGGCCGAGTACAGGGGCTGGAGGACCAGAAGCCCCTTGGTCCTGAACCTCCACGGCAGGAGAAGCCGGTaGCCTGCGCAGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MAEYRGWRTRSPLVLNLHGRRSR*PAQSRC
Trigger: GCACCTGCTCTGCGCAGGGCACCGGCTTCTCCTGCC...GTGGAGGTTCAGGACCAAGGGGCTTCTGGTCCTCCAGCCCCTGTACTCGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGACCGCCGGGTTGCCCTTaGTCTTGGGCAGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: IRGGNRSDHRAWPSTGAGPPGCP*SWAGWH
Trigger: GTGCCAACCTGCCCAAGAGCAAGGGCAACCCGGCGG...TCCAGCCCCTGTACTCGGCCATGCCCTGTGGTCACTGCGGTTGCCGCCCCTAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp GGGCCGGGTCAGCCTTTGGCACAATTAGGGGCGGCAACCGCAGTGACCACAGGGCGTAAGCCGCCGGGTTaGCCTTGCTCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPGQPLAQLGAATAVTTGRKPPG*PCSWAG
Trigger: ACCTGCCCAAGAGCAAGGGCAACCCGGCGGCTTACG...CCCTGTGGTCACTGCGGTTGCCGCCCCTAATTGTGCCAAAGGCTGACCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265662.9
ENST00000341511.11
ENST00000371605.7
ENST00000479446.5
ENST00000487109.5
ENST00000614293.4
CDS-3UTR GCA 90 bp ATTAGGGGCGGCAACCGCAGTGACCACAGGGCATGGCCGAGTACAGGGGCTGGAGTGTACAGCTGCAGGTaGTCCCGGGCCGTGAGCTCG +
Preferenc