RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165029

Ensembl transcript IDs: ENST00000374733.1, ENST00000374736.8, ENST00000423487.6, ENST00000494467.1, ENST00000678995.1

Found 909 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACTCATTGCCAGCAATGGATGTGTCACCGGGAAACCAGTCTCCTaGGCATGGCATGGCTTAGTGAATGAGGATGTGCATTACCTTTTG +
Preference number: 1 (lower is better)
Translates to: TLIASNGCVTGKPVS*AWHGLVNEDVHYLL
Trigger: CAAAAGGTAATGCACATCCTCATTCACTAAGCCATGCCATGCCCAGGAGACTGGTTTCCCGGTGACACATCCATTGCTGGCAATGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR TCA 90 bp CCATGCCCTGGCTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTaGTTCTTTGCCTCTTACCAGGATCTAAGTATATTTAAGAGTCTC +
Preference number: 1 (lower is better)
Translates to: PCPGFSSLQPQQFGC*FFASYQDLSIFKSL
Trigger: GAGACTCTTAAATATACTTAGATCCTGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAGGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR GCA 90 bp CAATGGAACCAAGTTTCCCGTGCCTGGAGACACCCACATTTTTGTTaGATGTTACTGCCACCAGAACAGCTTATCAGAGGGAATCAAAGC +
Preference number: 1 (lower is better)
Translates to: QWNQVSRAWRHPHFC*MLLPPEQLIRGNQS
Trigger: GCTTTGATTCCCTCTGATAAGCTGTTCTGGTGGCAGTAACATGCAACAAAAATGTGGGTGTCTCCAGGCACGGGAAACTTGGTTCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 90 bp ATTGCCAGCAATGGATGTGTCACCGGGAAACCAGTCTCCTGGGCATaGCATGGCTTAGTGAATGAGGATGTGCATTACCTTTTGATTTTG +
Preference number: 1 (lower is better)
Translates to: IASNGCVTGKPVSWA*HGLVNEDVHYLLIL
Trigger: CAAAATCAAAAGGTAATGCACATCCTCATTCACTAAGCCATGCCATGCCCAGGAGACTGGTTTCCCGGTGACACATCCATTGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 90 bp TCTTCCCACATCAACTTCTGGCTCTTTTCTCCACAACACTTCACATaGTGCAAAGGAAAGTCTAGTTCCTCTTTACTTTCAGCCACCCCG +
Preference number: 1 (lower is better)
Translates to: SSHINFWLFSPQHFT*CKGKSSSSLLSATP
Trigger: CGGGGTGGCTGAAAGTAAAGAGGAACTAGACTTTCCTTTGCACCATGTGAAGTGTTGTGGAGAAAAGAGCCAGAAGTTGATGTGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR TCA 90 bp GAATCAAAGCAGGATGTTAGCCACGCATGGCACCATTCTGTCAACTaGTATTCAATGTTGATAGACTCTGAGCAGAGCAGCTTTCACAAA +
Preference number: 1 (lower is better)
Translates to: ESKQDVSHAWHHSVN*YSMLIDSEQSSFHK
Trigger: TTTGTGAAAGCTGCTCTGCTCAGAGTCTATCAACATTGAATATCAGTTGACAGAATGGTGCCATGCGTGGCTAACATCCTGCTTTGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGACAGTCAGGACAAATaGGCACAGGCTTCCCTAGGT +
Preference number: 2 (lower is better)
Translates to: AVAILLYTTGFYKEAILRDSQDK*AQASLG
Trigger: ACCTAGGGAAGCCTGTGCCCATTTGTCCTGACTGTC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACAACACTTCACATGGTaGAAAGGAAAGTCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPQHFTW*KGKSSS
Trigger: GGAACTAGACTTTCCTTTGCACCATGTGAAGTGTTG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACCACAACACTTCACATaGTGCAAAGGAAAGTCTAGT +
Preference number: 2 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPPQHFT*CKGKSS
Trigger: ACTAGACTTTCCTTTGCACCATGTGAAGTGTTGTGG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTCCCACATCAACTTCTaGCTCTTTTCTCCACAACAC +
Preference number: 2 (lower is better)
Translates to: AVAILLYTTGFYKEAILRSHINF*LFSPQH
Trigger: GTGTTGTGGAGAAAAGAGCCAGAAGTTGATGTGGGA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CAA 90 bp TCAAACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATaGCCAGCAATGGATGTGTCACCGGGAAACCAGTCTCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: SNFLKNLALITLAHS*PAMDVSPGNQSPGH
Trigger: ATGCCCAGGAGACTGGTTTCCCGGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CAA 90 bp ACAATGGAACCAAGTTTCCCGTGCCTGGAGACACCCACATTTTTGTaGCATGTTACTGCCACCAGAACAGCTTATCAGAGGGAATCAAAG +
Preference number: 2 (lower is better)
Translates to: TMEPSFPCLETPTFL*HVTATRTAYQRESK
Trigger: CTTTGATTCCCTCTGATAAGCTGTTCTGGTGGCAGTAACATGCAACAAAAATGTGGGTGTCTCCAGGCACGGGAAACTTGGTTCCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCTCTGGCACACTCATTaGCAGCAATGGATGTGTCAC +
Preference number: 2 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLWHTH*QQWMCH
Trigger: GTGACACATCCATTGCTGGCAATGAGTGTGCCAGAG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACTCTGGCACACTCATTaGCAGCAATGGATGTGTCAC +
Preference number: 2 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGLWHTH*QQWMCH
Trigger: GTGACACATCCATTGCTGGCAATGAGTGTGCCAGAG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACTGGCTTCAGCAGCTTaGAGCCCCAGCAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: NGVSNICKANYLKVLNAILASAA*SPSSLA
Trigger: AGCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTCCCACATCAACTTCTaGCTCTTTTCTCCACAACAC +
Preference number: 2 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSHINF*LFSPQH
Trigger: GTGTTGTGGAGAAAAGAGCCAGAAGTTGATGTGGGA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAACTCATTGCCAGCAATaGATGTGTCACCGGGAAACC +
Preference number: 2 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGTHCQQ*MCHRET
Trigger: GGTTTCCCGGTGACACATCCATTGCTGGCAATGAGT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CAA 90 bp AAAGTGAGCATGACACACCATGGTGCTTCAAACTTTCTGAAAAACTaGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTG +
Preference number: 2 (lower is better)
Translates to: KVSMTHHGASNFLKN*ALITLAHSLPAMDV
Trigger: CACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTTTGAAGCACCATGGTGTGTCATGCTCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTTGTTGCAACCCCAATaGGAATACACAGGAACAAAA +
Preference number: 2 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTLLQPQ*EYTGTK
Trigger: TTTTGTTCCTGTGTATTCTCATTGGGGTTGCAACAA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACAGCAGTTTGGCTGTTaGTTCTTTGCCTCTTACCAG +
Preference number: 2 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGQQFGC*FFASYQ
Trigger: CTGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp CAATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGTGGTTTGGCAATTCCTaGCTGAATAGGGAAGTAAAA +
Preference number: 2 (lower is better)
Translates to: QFYFNQLAHDARLHIPLLWFGNS*LNREVK
Trigger: TTTTACTTCCCTATTCAGGCAGGAATTGCCAAACCA...CAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
3UTR-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAGGCTACAAAGGCACTaGCCCTGTAATGGAATTTTG +
Preference number: 2 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKRLQRH*PCNGIL
Trigger: CAAAATTCCATTACAGGGGCAGTGCCTTTGTAGCCT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACCAGTCTCCTGGGCATaGCATGGCTTAGTGAATGAG +
Preference number: 2 (lower is better)
Translates to: NGVSNICKANYLKVLNAIPVSWA*HGLVNE
Trigger: CTCATTCACTAAGCCATGCCATGCCCAGGAGACTGG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAAAATAGTGGGGCAGTaGCCATACTCCTCTATACCA +
Preference number: 2 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKKIVGQ*PYSSIP
Trigger: TGGTATAGAGGAGTATGGCCACTGCCCCACTATTTT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGAACCAAGTTTCCCGTaGCTGGAGACACCCACATTT +
Preference number: 2 (lower is better)
Translates to: NGVSNICKANYLKVLNAIEPSFP*LETPTF
Trigger: AAATGTGGGTGTCTCCAGGCACGGGAAACTTGGTTC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATGGCTGTTGATTCTTTaGCTCTTACCAGGATCTAAG +
Preference number: 2 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGWLLIL*LLPGSK
Trigger: CTTAGATCCTGGTAAGAGGCAAAGAATCAACAGCCA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCCACAACACTTCACATaGTGCAAAGGAAAGTCTAGT +
Preference number: 2 (lower is better)
Translates to: NFLKNLALITLAHSLPAMPQHFT*CKGKSS
Trigger: ACTAGACTTTCCTTTGCACCATGTGAAGTGTTGTGG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGAGCATGACACACCATaGTGCTTCAAACTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGEHDTP*CFKLSE
Trigger: TTCAGAAAGTTTGAAGCACCATGGTGTGTCATGCTC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCAAGTTTCCCGTGCCTaGAGACACCCACATTTTTGT +
Preference number: 2 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLQVSRA*RHPHFC
Trigger: ACAAAAATGTGGGTGTCTCCAGGCACGGGAAACTTG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGGCACTAGTCATGACTaGTATGCAAACTTACATAAG +
Preference number: 2 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGGTSHD*YANLHK
Trigger: CTTATGTAAGTTTGCATATCAGTCATGACTAGTGCC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACATGACACACCATGGTaGTTCAAACTTTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKHDTPW*FKLSEK
Trigger: TTTTTCAGAAAGTTTGAAGCACCATGGTGTGTCATG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCACCCACATTTTTGTTaGATGTTACTGCCACCAGAA +
Preference number: 2 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLHPHFC*MLLPPE
Trigger: TTCTGGTGGCAGTAACATGCAACAAAAATGTGGGTG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCGCATGGCTTAGTGAATaGGGATGTGCATTACCTTTT +
Preference number: 2 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCAWLSE*GCALPF
Trigger: AAAAGGTAATGCACATCCTCATTCACTAAGCCATGC...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGCATGGCTTAGTGAATaGGGATGTGCATTACCTTTT +
Preference number: 2 (lower is better)
Translates to: NGVSNICKANYLKVLNAIAWLSE*GCALPF
Trigger: AAAAGGTAATGCACATCCTCATTCACTAAGCCATGC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAATGTCATGAGATCCTaGCCATCACATTGCTTTCTA +
Preference number: 2 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLNVMRS*PSHCFL
Trigger: TAGAAAGCAATGTGATGGTCAGGATCTCATGACATT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACAACACTTCACATGGTaGAAAGGAAAGTCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKQHFTW*KGKSSS
Trigger: GGAACTAGACTTTCCTTTGCACCATGTGAAGTGTTG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTTGTTGCATGTTACTaGCACCAGAACAGCTTATCA +
Preference number: 2 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCFVACY*HQNSLS
Trigger: TGATAAGCTGTTCTGGTGGCAGTAACATGCAACAAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATTTGTTGCATGTTACTaGCACCAGAACAGCTTATCA +
Preference number: 2 (lower is better)
Translates to: NGVSNICKANYLKVLNAIFVACY*HQNSLS
Trigger: TGATAAGCTGTTCTGGTGGCAGTAACATGCAACAAA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTTAAAATATGGCCTTaGAATCAGAGGAACCGAAGT +
Preference number: 2 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCFKIWP*NQRNRS
Trigger: ACTTCGGTTCCTCTGATTTCAAGGCCATATTTTAAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTGTAAAATGCAACGATaGCATATCACTAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCCKMQR*HITSYW
Trigger: CCAATAACTAGTGATATGGCATCGTTGCATTTTACA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 72 bp GCCAGCAATGGATGTGTCACCGGGAAACCAGTCTCCTaGGCATGGCATGGCTTAGTGAATGAGGATGTGCAT +
Preference number: 3 (lower is better)
Translates to: ASNGCVTGKPVS*AWHGLVNEDVH
Trigger: ATGCACATCCTCATTCACTAAGCCATGCCATGCCCAGGAGACTGGTTTCCCGGTGACACATCCATTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 72 bp ATGCCCTGGCTTCAGCAGCTTGCAGCCCCAGCAGTTTaGCTGTTGATTCTTTGCCTCTTACCAGGATCTAAG +
Preference number: 3 (lower is better)
Translates to: MPWLQQLAAPAV*LLILCLLPGSK
Trigger: CTTAGATCCTGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAACTCTGGCACACTCATaGCCAGCAATGGATGTGTCA +
Preference number: 3 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPTLAHS*PAMDVS
Trigger: TGACACATCCATTGCTGGCAATGAGTGTGCCAGAGT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR GCA 72 bp TTCCCTAGGTTTGAACGCACAATCTCTTTAATCCCATaGCCTGGCTTCAGCAGCTTGCAGCCCCAGCAGTTT +
Preference number: 3 (lower is better)
Translates to: FPRFERTISLIP*PGFSSLQPQQF
Trigger: AAACTGCTGGGGCTGCAAGCTGCTGAAGCCAGGGCATGGGATTAAAGAGATTGTGCGTTCAAACCTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACCTGGCTTCAGCAGCTaGCAGCCCCAGCAGTTTGGC +
Preference number: 3 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKPGFSS*QPQQFG
Trigger: GCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAGG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 72 bp AATGGATGTGTCACCGGGAAACCAGTCTCCTGGGCATaGCATGGCTTAGTGAATGAGGATGTGCATTACCTT +
Preference number: 3 (lower is better)
Translates to: NGCVTGKPVSWA*HGLVNEDVHYL
Trigger: AAGGTAATGCACATCCTCATTCACTAAGCCATGCCATGCCCAGGAGACTGGTTTCCCGGTGACACATCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 72 bp ATGCAGTGTACCATGTTAGCAGACAGTCAGGACAAATaGGCACAGGCTTCCCTAGGTTTGAACGCACAATCT +
Preference number: 3 (lower is better)
Translates to: MQCTMLADSQDK*AQASLGLNAQS
Trigger: AGATTGTGCGTTCAAACCTAGGGAAGCCTGTGCCCATTTGTCCTGACTGTCTGCTAACATGGTACACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACCTGGCTTCAGCAGCTaGCAGCCCCAGCAGTTTGGC +
Preference number: 3 (lower is better)
Translates to: NGVSNICKANYLKVLNAIPGFSS*QPQQFG
Trigger: GCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAGG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR TCA 72 bp GGCTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTaGTTCTTTGCCTCTTACCAGGATCTAAGTATATTT +
Preference number: 3 (lower is better)
Translates to: GFSSLQPQQFGC*FFASYQDLSIF
Trigger: AAATATACTTAGATCCTGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAATTCAAGTCTTTCACTaGAGAGCCATACAAGACATA +
Preference number: 3 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPIQVFH*RAIQDI
Trigger: TATGTCTTGTATGGCTCTCAAGTGAAAGACTTGAAT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAATGCAGCCCCAGCAGTTaGGCTGTTGATTCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKCSPSS*AVDSLP
Trigger: AGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCA...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR GCA 72 bp AATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTaGATATTCCACTCCTGGATGGTTTGGCAATTCCTG +
Preference number: 3 (lower is better)
Translates to: NFILTSWPMTPG*IFHSWMVWQFL
Trigger: CAGGAATTGCCAAACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
3UTR-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCATTACCTTTTGATTTaGATCAATAATCGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: AVAILLYTTGFYKEAILRHYLLI*INNRWP
Trigger: TGGCCAGCGATTATTGATCAAAATCAAAAGGTAATG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAACTCTGGCACACTCATaGCCAGCAATGGATGTGTCA +
Preference number: 3 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGTLAHS*PAMDVS
Trigger: TGACACATCCATTGCTGGCAATGAGTGTGCCAGAGT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAAAAGGCTGCCCAGTATaGTTACAGTGGGCTCCTACA +
Preference number: 3 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGKGCPV*LQWAPT
Trigger: TGTAGGAGCCCACTGTAACAATACTGGGCAGCCTTT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTGCTGGCCATGATTACTaGATGAATTATTGTTGCAAC +
Preference number: 3 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFAGHDY*MNYCCN
Trigger: GTTGCAACAATAATTCATCAAGTAATCATGGCCAGC...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAACACCCACATTTTTGTaGCATGTTACTGCCACCAGA +
Preference number: 3 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGTPTFL*HVTATR
Trigger: TCTGGTGGCAGTAACATGCAACAAAAATGTGGGTGT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 72 bp CAGAGCAGCTTTCACAAAAGTGAGCATGACACACCATaGTGCTTCAAACTTTCTGAAAAACTTGGCACTAAT +
Preference number: 3 (lower is better)
Translates to: QSSFHKSEHDTP*CFKLSEKLGTN
Trigger: ATTAGTGCCAAGTTTTTCAGAAAGTTTGAAGCACCATGGTGTGTCATGCTCACTTTTGTGAAAGCTGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGCTGGCCATGATTACTaGATGAATTATTGTTGCAAC +
Preference number: 3 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKAGHDY*MNYCCN
Trigger: GTTGCAACAATAATTCATCAAGTAATCATGGCCAGC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR GCA 72 bp AGCAGCTTTCACAAAAGTGAGCATGACACACCATGGTaGTTCAAACTTTCTGAAAAACTTGGCACTAATAAC +
Preference number: 3 (lower is better)
Translates to: SSFHKSEHDTPW*FKLSEKLGTNN
Trigger: GTTATTAGTGCCAAGTTTTTCAGAAAGTTTGAAGCACCATGGTGTGTCATGCTCACTTTTGTGAAAGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CCA 72 bp ATCAACTTCTGGCTCTTTTCTCCACAACACTTCACATaGTGCAAAGGAAAGTCTAGTTCCTCTTTACTTTCA +
Preference number: 3 (lower is better)
Translates to: INFWLFSPQHFT*CKGKSSSSLLS
Trigger: TGAAAGTAAAGAGGAACTAGACTTTCCTTTGCACCATGTGAAGTGTTGTGGAGAAAAGAGCCAGAAGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAAAACCCATATGTCCATaGGGTTCCATAATAGAGTTT +
Preference number: 3 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGKPICP*GSIIEF
Trigger: AAACTCTATTATGGAACCCAATGGACATATGGGTTT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTATTCAAGTCTTTCACTaGAGAGCCATACAAGACATA +
Preference number: 3 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLIQVFH*RAIQDI
Trigger: TATGTCTTGTATGGCTCTCAAGTGAAAGACTTGAAT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCATTACCTTTTGATTTaGATCAATAATCGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLHYLLI*INNRWP
Trigger: TGGCCAGCGATTATTGATCAAAATCAAAAGGTAATG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCGACCCTTATACTTTCTaGGCTTTTGCATTGTTGCAA +
Preference number: 3 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCDPYTF*AFALLQ
Trigger: TTGCAACAATGCAAAAGCCAAGAAAGTATAAGGGTC...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAACTTTCTGAAAAACTaGGCACTAATAACTCTGGCA +
Preference number: 3 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCNFLKN*ALITLA
Trigger: TGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAAACTTTCTGAAAAACTaGGCACTAATAACTCTGGCA +
Preference number: 3 (lower is better)
Translates to: NGVSNICKANYLKVLNAINFLKN*ALITLA
Trigger: TGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR GCA 72 bp TTTGAGACTGTCAGATTTAATGGGGTATCCAATATCTaGAAAGCCAATTATTTGAAGGTACTAAATGCCATA +
Preference number: 3 (lower is better)
Translates to: FETVRFNGVSNI*KANYLKVLNAI
Trigger: TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATTAAATCTGACAGTCTCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGGGTCGGCTCGGCTCTaGGGGTCCCGGCCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNGSARL*GSRPHS
Trigger: TGAGTGGGGCCGGGACCCGCAGAGCCGAGCCGACCC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAAACCGGCTCTGTTGGTaGGCGGAGCTCCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPNRLCW*AELPAL
Trigger: CAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGGGGTCGGCTCGGCTCTaGGGGTCCCGGCCCCACTCA +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQGSARL*GSRPHS
Trigger: TGAGTGGGGCCGGGACCCGCAGAGCCGAGCCGACCC...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp ACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATTTCTTGGGTCGGCTCGGCTCTaGGGGTCCCGGCCCCACTCA +
Preference number: 4 (lower is better)
Translates to: TTSLPFTTITRTRVYSFLGSARL*GSRPHS
Trigger: TGAGTGGGGCCGGGACCCGCAGAGCCGAGCCGACCC...AAGAAATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR GCA 90 bp CAAGGGTTTATTCATTTCTTTCCAGTAGCTGCACAACGTAATTGCCATCAGCCCCTCCCCGCCCTGCCCTaGCGCAGCCCGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QGFIHFFPVAAQRNCHQPLPALP*RSPGEK
Trigger: CTTCTCTCCCGGGCTGCGGCAGGGCAGGGCGGGGAG...GGGCTGATGGCAATTACGTTGTGCAGCTACTGGAAAGAAATGAATAAACCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAACCGGCTCTGTTGGTaGGCGGAGCTCCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNNRLCW*AELPAL
Trigger: CAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CAGGTTGCATATTCCACTCCTGGATGGTTTGGCAATTCCTGCCTGAATAGGGAAGAGAACCGGCTCTGTTaGTGCGCGGAGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: QVAYSTPGWFGNSCLNREENRLC*CAELPA
Trigger: GGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCTC...TTCCCTATTCAGGCAGGAATTGCCAAACCATCCAGGAGTGGAATATGCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGAGAACCGGCTCTGTTaGTGCGCGGAGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNENRLC*CAELPA
Trigger: GGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCTC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGTGGCTCGGGAGCCCTaGAAGGCAGCGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNVAREP*KAAARA
Trigger: AGCTCTGGCCGCTGCCTTCCAGGGCTCCCGAGCCAC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAGCACCCCCAGCGTGTaGCTCGGGAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSTPSV*LGSPGR
Trigger: CCTTCCAGGGCTCCCGAGCCACACGCTGGGGGTGCT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATCCACTCTGCCCAGCTaGGGGAAGCTCAGGCACCAC +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPSTLPS*GKLRHH
Trigger: GTGGTGCCTGAGCTTCCCCCAGCTGGGCAGAGTGGA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCCCCCTCCCTCGGGATaGCCGCAGACAATACGAGAC +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRPPPSG*PQTIRD
Trigger: GTCTCGTATTGTCTGCGGGCATCCCGAGGGAGGGGG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGAGAACCGGCTCTGTTaGTGCGCGGAGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTENRLC*CAELPA
Trigger: GGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCTC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGTGGCTCGGGAGCCCTaGAAGGCAGCGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTVAREP*KAAARA
Trigger: AGCTCTGGCCGCTGCCTTCCAGGGCTCCCGAGCCAC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGAGCACCCCCAGCGTGTaGCTCGGGAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQSTPSV*LGSPGR
Trigger: CCTTCCAGGGCTCCCGAGCCACACGCTGGGGGTGCT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACCCCTTCCACGGCCATaGCGAAGAGGTTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPPLPRP*RRGFVP
Trigger: TGGGACGAAACCTCTTCGCCATGGCCGTGGAAGGGG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATGTTCACCTCAGCCATaGCCTGCCTTGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPCSPQP*PALWLE
Trigger: CTCCAGCCACAAGGCAGGTCATGGCTGAGGTGAACA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp ACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATTTCTTAACCGGCTCTGTTGGTaGGCGGAGCTCCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TTSLPFTTITRTRVYSFLNRLCW*AELPAL
Trigger: CAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTT...AAGAAATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAACATCCAGGGCCATCTaGTCCATCTCCGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPTSRAI*SISAFT
Trigger: CGTGAAGGCGGAGATGGAGCAGATGGCCCTGGATGT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGGGGCGAAGACAGCTCTaGTTGTCCCCGAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQGRRQL*LSPKAR
Trigger: GCGGGCCTTCGGGGACAAGCAGAGCTGTCTTCGCCC...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACCAGGCTGGGGTACTTaGCAAAGGGTGGCACGATCA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPPGWGT*QRVARS
Trigger: TGATCGTGCCACCCTTTGGCAAGTACCCCAGCCTGG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAGGAGCAAAGCGCCCTaGGAACCGGCTCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNRSKAP*EPALLV
Trigger: CACCAACAGAGCCGGTTCTCAGGGCGCTTTGCTCCT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATTCCTAACTTCAGGATaGCCACTAGCAGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPFLTSG*PLAGQR
Trigger: GCGCTGGCCTGCTAGTGGTCATCCTGAAGTTAGGAA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGTGGCACGATCAGGCTaGACACAAGGGCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPVARSG*TQGQCR
Trigger: TCTGCATTGCCCTTGTGTTCAGCCTGATCGTGCCAC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGCCCCCACAGGCTGCTaGCAGGTTGGCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTAPTGC*QVGSGE
Trigger: TTCTCCAGAGCCAACCTGGCAGCAGCCTGTGGGGGC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGGGTTCTCTCCCTTTTaGAGGTTGGCCCGGAGAATG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPGFSPF*RLARRM
Trigger: CATTCTCCGGGCCAACCTGCAAAAGGGAGAGAACCC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGGGCGTGTCTGGGATTaGGTTTCCTTCCATACAGCG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPGRVWD*VSFHTA
Trigger: CGCTGTATGGAAGGAAACCCAATCCCAGACACGCCC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAAACCCAGACCCAGCTaGCCCTCCCACACTGCCATA +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNKPRPS*PSHTAI
Trigger: TATGGCAGTGTGGGAGGGTCAGCTGGGTCTGGGTTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGGGTCGGCTCGGCTCTaGGGGTCCCGGCCCCACTCA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLGSARL*GSRPHS
Trigger: TGAGTGGGGCCGGGACCCGCAGAGCCGAGCCGACCC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAACCGGCTCTGTTGGTaGGCGGAGCTCCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKNRLCW*AELPAL
Trigger: CAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAACCCTGATGATTGCCTaGTCCACCACATCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPTLMIA*STTSCK
Trigger: CTTGCAGGATGTGGTGGAGCAGGCAATCATCAGGGT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCAGCACCCTGATGATTaGCTGCTCCACCACATCCTG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRQHPDD*LLHHIL
Trigger: CAGGATGTGGTGGAGCAGGCAATCATCAGGGTGCTG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGCCACCTCTGAGAGCTaGTGCTTGGTGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRATSES*CLVRFR
Trigger: CCTGAATCTCACCAAGCAGCAGCTCTCAGAGGTGGC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGGACTGGACATCCTCTaGGTGCTTGGCCAAAAACGC +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRGLDIL*VLGQKR
Trigger: GCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCCAGGTTCTGCCGGATaGTGCTCATCTCAGAGCGAA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRPGSAG*CSSQSE
Trigger: TTCGCTCTGAGATGAGCACCATCCGGCAGAACCTGG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCTGGCAGGGCGTGTCTaGGATTGGGTTTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRLAGRV*DWVSFH
Trigger: ATGGAAGGAAACCCAATCCCAGACACGCCCTGCCAG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACTCCCTTTTGCAGGTTaGCCCGGAGAATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPLPFAG*PGEWHC
Trigger: ACAATGCCATTCTCCGGGCCAACCTGCAAAAGGGAG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGGACATCCACTGATGTaGTCATCAGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPGHPLM*SSEPPL
Trigger: CAGAGGTGGCTCTGATGACCACATCAGTGGATGTCC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGCAGCCCCAGCAGTTTaGCTGTTGATTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPAAPAV*LLILCL
Trigger: GAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGACAGTCAGGACAAATaGGCACAGGCTTCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPDSQDK*AQASLG
Trigger: ACCTAGGGAAGCCTGTGCCCATTTGTCCTGACTGTC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCAAACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATTAGGAGCAAAGCGCCCTaGGAACCGGCTCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SNYLPPLHHHYKDKGLFIRSKAP*EPALLV
Trigger: CACCAACAGAGCCGGTTCTCAGGGCGCTTTGCTCCT...AATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTAGGAGCAAAGCGCCCTaGGAACCGGCTCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFRSKAP*EPALLV
Trigger: CACCAACAGAGCCGGTTCTCAGGGCGCTTTGCTCCT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAGCAGCAACCTCAGCTaGGGCCAACAAGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSSNLS*GQQAMF
Trigger: GAACATGGCTTGTTGGCCTCAGCTGAGGTTGCTGCT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAAGCCTCCGAGCATCTaGGAACAGGCGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNKPPSI*EQASHN
Trigger: ATTGTGGCTCGCCTGTTCTCAGATGCTCGGAGGCTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTCCAGCTTCTCATGCTaGACAGCTCCTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSSFSC*TAPGPE
Trigger: CTCTGGCCCAGGAGCTGTTCAGCATGAGAAGCTGGA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCATGAAGAGGGGCATTaGCCGGCTCATCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFHEEGH*PAHHPQ
Trigger: CTGCGGGTGATGAGCCGGTCAATGCCCCTCTTCATG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATCTCTTCGGCCACCTTaGGGAATATTTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPSLRPP*GIFLPG
Trigger: CCCTGGAAGAAATATTCCTCAAGGTGGCCGAAGAGA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCAGTCAACAGCTCTGTaGTGGCATCAAACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRQSTAL*WHQTEG
Trigger: GCCCTCAGTTTGATGCCATCACAGAGCTGTTGACTG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTTTGGCAATTCCTGCCATGTTCTCAGAACTTTaGGCATGTCCTTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: AHDARLHIPLLDGLAIPAMFSEL*ACPSCW
Trigger: CCAGCATGAAGGACATGCGCAAAGTTCTGAGAACAT...GGCAGGAATTGCCAAACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACTTCCTCAGTGCCATTaGCTCCAAAGAGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPLPQCH*LQRGLC
Trigger: ACAAAGCCCTCTTTGGAGGCAATGGCACTGAGGAAG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGGCCAGCATCAGAACTaGTCTGAGAAACACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPGQHQN*SEKHCP
Trigger: AGGACAGTGTTTCTCAGAGCAGTTCTGATGCTGGCC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCGGGCTTCAGACACATaGTTCCTGATGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRRASDT*FLMRLE
Trigger: CTCCAACCTCATCAGGAAGCATGTGTCTGAAGCCCG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGGGCGAAGACAGCTCTaGTTGTCCCCGAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKGRRQL*LSPKAR
Trigger: GCGGGCCTTCGGGGACAAGCAGAGCTGTCTTCGCCC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACCCACTCACCAACCTTaGCAACTTCTTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPPTHQP*QLLSLG
Trigger: TCCCAGAGAAAGAAGTTGGCAAGGTTGGTGAGTGGG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAACAGCAGGGACGCCGTaGCTGGTCATTAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPTAGTP*LVINCF
Trigger: AAAACAGTTAATGACCAGCCACGGCGTCCCTGCTGT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATTTGGGTGGAGGAGCTaGAGCTGTTCACATTGGTCA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPFGWRS*SCSHWS
Trigger: TGACCAATGTGAACAGCTCCAGCTCCTCCACCCAAA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCATCCTCTGGGTGCTTaGCCAAAAACGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRHPLGA*PKTPRC
Trigger: ACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCTGGGAATTCCGTACTaGCCTGGAAAGACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRLGIPY*PGKTAS
Trigger: TGAGGCTGTCTTTCCAGGCCAGTACGGAATTCCCAG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGAAAATACCAGGGCCTaGGAATTCCGTACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRENTRA*EFRTGL
Trigger: CAGGCCAGTACGGAATTCCCAGGCCCTGGTATTTTC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATGGTTGGAACCAGGGTaGCTCTTCTCATCACTTTCC +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPWLEPG*LFSSLS
Trigger: GGAAAGTGATGAGAAGAGCCACCCTGGTTCCAACCA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCACGCCCAGCTTCAAGTaGGTGGGTTCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTTPSFK*VGSSSM
Trigger: CATGGAGGAGGAACCCACCCACTTGAAGCTGGGCGT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACTTTCCGACTCCGTCTaGCAATTAGCAGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPLSDSV*QLAVSS
Trigger: GGAAGAGACTGCTAATTGCCAGACGGAGTCGGAAAG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGGACATCCACTGATGTaGTCATCAGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRGHPLM*SSEPPL
Trigger: CAGAGGTGGCTCTGATGACCACATCAGTGGATGTCC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGATCCATGCCTGTGGTaGGTTCATCCAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPDPCLW*VHPETP
Trigger: TGGTGTTTCTGGATGAACCCACCACAGGCATGGATC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGGATCTTTCTCCTACCCCTTaGCAAGCCTTCCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FYFNQLAHDARLHIPLLDLSPTP*QAFRRR
Trigger: CCTTCTCCGGAAGGCTTGTCAAGGGGTAGGAGAAAG...ATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCAGCAGCAACCTCAGCTaGGGCCAACAAGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSSNLS*GQQAMF
Trigger: GAACATGGCTTGTTGGCCTCAGCTGAGGTTGCTGCT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGGGAGAGAGAGGTTGTaGTACAGGAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNGRERL*YRNPEK
Trigger: CTTCTCTGGGTTCCTGTATCACAACCTCTCTCTCCC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCTTGGCTGTTCTCCATaGAGGTCCAGATCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLGCSP*RSRSWG
Trigger: GCCCCAAGATCTGGACCTTCATGGAGAACAGCCAAG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTGCCATCCATCCCACTaGGCAAGTCTGTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQCHPSH*ASLSLW
Trigger: CCAGAGAGACAGACTTGCTCAGTGGGATGGATGGCA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGGTGGCACGATCAGGCTaGACACAAGGGCAATGCAGA +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQVARSG*TQGQCR
Trigger: TCTGCATTGCCCTTGTGTTCAGCCTGATCGTGCCAC...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTCTGGAAGAGGTCCATaGTGGTCTGGGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSGRGP*WSGELG
Trigger: CCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACAGGCAGCATCTTCTTaGTTTTGTCGCTGCTACACT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPQAASS*FCRCYT
Trigger: AGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAAGTACTCGCTCTGCTaGAGCCAGTTTCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNKYSLC*SQFLPW
Trigger: CCAAGGGAGAAACTGGCTGCAGCAGAGCGAGTACTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCAGCACCCTGATGATTaGCTGCTCCACCACATCCTG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQQHPDD*LLHHIL
Trigger: CAGGATGTGGTGGAGCAGGCAATCATCAGGGTGCTG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGCCCCCACAGGCTGCTaGCAGGTTGGCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGAPTGC*QVGSGE
Trigger: TTCTCCAGAGCCAACCTGGCAGCAGCCTGTGGGGGC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCACGTAGTCCTGCCATaGCACACACAGGACGTAGGG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFHVVLP*HTQDVG
Trigger: CCCTACGTCCTGTGTGTGGCATGGCAGGACTACGTG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTGCACTCCAATGCCCTaGTCCTCAAAAAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRCTPMP*SSKRAK
Trigger: CTTTGCCCTTTTTGAGGAGCAGGGCATTGGAGTGCA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTGCTCCCATATTCCCCTaGGGGAGTAAGGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFAPIFP*GSKGPH
Trigger: GTGTGGACCCTTACTCCCGCAGGGGAATATGGGAGC...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCCGGTTGCTGCTACTaGTGCACTTCTTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSGCCY*CTSWHS
Trigger: ACTGTGCCAAGAAGTGCAGCAGTAGCAGCAACCGGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTGCATCTCCGGTTGCTaGTACTGCTGCACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNCISGC*YCCTSW
Trigger: CCAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAATGTTGTTCATAGGGTaGGTAGCTCAGCCGAACAGA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPMLFIG*VAQPNR
Trigger: TCTGTTCGGCTGAGCTACCCACCCTATGAACAACAT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAACGCCACGATGTCTTaGGCTGTCCAATCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRNATMS*AVQSKP
Trigger: TGGCTTAGATTGGACAGCCCAAGACATCGTGGCGTT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGGACTGGACATCCTCTaGGTGCTTGGCCAAAAACGC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTGLDIL*VLGQKR
Trigger: GCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCCAGCTTCAAGTGGGTaGGTTCCTCCTCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTPASSG*VPPPCR
Trigger: TCTGCATGGAGGAGGAACCCACCCACTTGAAGCTGG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATTACCAGGTTCTGAATaGACACGCCCAGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPLPGSE*TRPASS
Trigger: ACTTGAAGCTGGGCGTGTCCATTCAGAACCTGGTAA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCGGTCAGGATTGACATaGTGGTCGTCTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFRSGLT*WSSSPL
Trigger: GAGCGGGGAAGACGACCACCATGTCAATCCTGACCG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCTCTCCCCATCATGTTaGGCTTTGCATCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNLSPSC*ALHLRL
Trigger: CAACCGGAGATGCAAAGCCCAACATGATGGGGAGAG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
3UTR CAA 72 bp CCAAGTTTCCCGTGCCTGGAGACACCCACATTTTTGTaGCATGTTACTGCCACCAGAACAGCTTATCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSFPCLETPTFL*HVTATRTAYQR
Trigger: CCTCTGATAAGCTGTTCTGGTGGCAGTAACATGCAACAAAAATGTGGGTGTCTCCAGGCACGGGAAACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TTCAAACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATAAGCCTCCGAGCATCTaGGAACAGGCGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: FKLPPSPSPPLQGQGFIHKPPSI*EQASHN
Trigger: ATTGTGGCTCGCCTGTTCTCAGATGCTCGGAGGCTT...ATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTCCAGATCTTGGGGCTaGGTTCCTCCCACATGCCTT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSRSWG*VPPTCL
Trigger: AAGGCATGTGGGAGGAACTCAGCCCCAAGATCTGGA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCTTGGCTGTTCTCCATaGAGGTCCAGATCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLGCSP*RSRSWG
Trigger: GCCCCAAGATCTGGACCTTCATGGAGAACAGCCAAG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACATGAAGAGGGGCATTaGCCGGCTCATCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKHEEGH*PAHHPQ
Trigger: CTGCGGGTGATGAGCCGGTCAATGCCCCTCTTCATG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGGCCCAGGAAGGAGGTaGTCTGGCCCTCATAAAAAT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTGPGRR*SGPHKN
Trigger: ATTTTTATGAGGGCCAGATCACCTCCTTCCTGGGCC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGCTTTTCAGCTTGCTTaGTGGCAAACCAACATCCAG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRAFQLA*WQTNIQ
Trigger: CTGGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCTTCCTGTCAGGTCCTaGAGGATATCTGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRLPVRS*RISAVF
Trigger: AAACACTGCAGATATCCTTCAGGACCTGACAGGAAG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCTCGGAGGAAGTGCTTaGGTATTACTGACACCCAGG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLGGSA*VLLTPR
Trigger: CCTGGGTGTCAGTAATACTCAAGCACTTCCTCCGAG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAATCTTCCCAAGCTGTTaGGAAATCGATCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPIFPSC*EIDLQN
Trigger: GTTCTGCAGATCGATTTCTCAACAGCTTGGGAAGAT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCACAAGGACATCCACTaGTGTGGTCATCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQHKDIH*CGHQSH
Trigger: GTGGCTCTGATGACCACATCAGTGGATGTCCTTGTG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTTTTCACCATGTCGATaGGCCCTCGTCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQFSPCR*ALVPGK
Trigger: TTTGCCTGGGACGAGGGCTCATCGACATGGTGAAAA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTTTTCACCATGTCGATaGGCCCTCGTCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTFSPCR*ALVPGK
Trigger: TTTGCCTGGGACGAGGGCTCATCGACATGGTGAAAA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACCTGTAGAAAAGATGTaGGAACTGCAACGTCCACTA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPPVEKM*ELQRPL
Trigger: TAGTGGACGTTGCAGTTCTCACATCTTTTCTACAGG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATTCAGCCACCCCGTATaGACAGGATTCTTCATACAT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPFSHPV*TGFFIH
Trigger: ATGTATGAAGAATCCTGTTCATACGGGGTGGCTGAA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCAGCAGTTTGGCTGTTaGTTCTTTGCCTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRQQFGC*FFASYQ
Trigger: CTGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTGCGCATGTCCTTCATaGTGGTGTCTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNCACPS*WCLSGC
Trigger: ACAGCCAGAAAGACACCAGCATGAAGGACATGCGCA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCAGCATCTTCCTCAGTaGCATTGCCTCCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQQHLPQ*HCLQRG
Trigger: CCCTCTTTGGAGGCAATGGCACTGAGGAAGATGCTG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGAGTGGTCATTGTCCCTaGTGTCCAACAGCATCCGGA +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQSGHCP*CPTASG
Trigger: TCCGGATGCTGTTGGACAGCAGGGACAATGACCACT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTGGACATCCTCTGGGTaGTTGGCCAAAAACGCCACG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFWTSSG*LAKNAT
Trigger: CGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCACCCTGATGATTGCCTaGTCCACCACATCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTTLMIA*STTSCK
Trigger: CTTGCAGGATGTGGTGGAGCAGGCAATCATCAGGGT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGGGTTCTGCCGGATGGTaGTCATCTCAGAGCGAATGT +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQGSAGW*SSQSEC
Trigger: ACATTCGCTCTGAGATGAGCACCATCCGGCAGAACC...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCTTTGCATCTCCGGTTaGTGCTACTGCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNLCISG*CYCCTS
Trigger: AGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCATCATGTTGGGCTTTaGATCTCCGGTTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNHHVGL*ISGCCY
Trigger: GTAGCAGCAACCGGAGATGCAAAGCCCAACATGATG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGAGAACCGGCTCTGTTaGTGCGCGGAGCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKENRLC*CAELPA
Trigger: GGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCTC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATACAGCAGGGACGCCGTaGCTGGTCATTAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNTAGTP*LVINCF
Trigger: AAAACAGTTAATGACCAGCCACGGCGTCCCTGCTGT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGTGGCTCGGGAGCCCTaGAAGGCAGCGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIVAREP*KAAARA
Trigger: AGCTCTGGCCGCTGCCTTCCAGGGCTCCCGAGCCAC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAGCACCCCCAGCGTGTaGCTCGGGAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCSTPSV*LGSPGR
Trigger: CCTTCCAGGGCTCCCGAGCCACACGCTGGGGGTGCT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTATGTTGTTCATAGGGTaGGTAGCTCAGCCGAACAGA +
Preference number: 4 (lower is better)
Translates to: YFNQLAHDARLHIPLLDGMLFIG*VAQPNR
Trigger: TCTGTTCGGCTGAGCTACCCACCCTATGAACAACAT...ACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACAAACCAGTAGGACTTaGTGCAAGGAAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPQTSRT*CKENTR
Trigger: CCTGGTATTTTCCTTGCACCAAGTCCTACTGGTTTG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAATTCCACCTGACAGCTaGCTTGTTTTGCTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPIPPDS*LVLLFS
Trigger: GCTGAAAAGCAAAACAAGCCAGCTGTCAGGTGGAAT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAAGCGTGTCACTCTCATaGTCGCTGCCCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSVSLS*SLPRPA
Trigger: TGCTGGCCTGGGCAGCGACCATGAGAGTGACACGCT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGTACTTGCCAAAGGGTaGCACGATCAGGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTVLAKG*HDQAEH
Trigger: GTGTTCAGCCTGATCGTGCCACCCTTTGGCAAGTAC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCCAGTCTCCTGGGCATaGCATGGCTTAGTGAATGAG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQPVSWA*HGLVNE
Trigger: CTCATTCACTAAGCCATGCCATGCCCAGGAGACTGG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCAAGTTTCCCGTGCCTaGAGACACCCACATTTTTGT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRQVSRA*RHPHFC
Trigger: ACAAAAATGTGGGTGTCTCCAGGCACGGGAAACTTG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTCATCAGCTTACCTTGTaGAGAATGACATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: YFNQLAHDARLHIPLLDGHQLTL*RMTSAL
Trigger: GAGGGCTGATGTCATTCTCCACAAGGTAAGCTGATG...ACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATACTTCCAGCAGCAGCTaGCATGTTTGTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNTSSSS*HVCLLL
Trigger: CAGAAGAAGACAAACATGTCAGCTGCTGCTGGAAGT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTCCACCAGGAAATCTTaGAGCTTCAAGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRSTRKS*SFKFEL
Trigger: CAGCTCAAACTTGAAGCTTCAAGATTTCCTGGTGGA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATCCAGCTTCTCATGCTaGACAGCTCCTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSSFSC*TAPGPE
Trigger: CTCTGGCCCAGGAGCTGTTCAGCATGAGAAGCTGGA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCGGTCATCAATCTCATaGAAGAGTTCCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRRSSIS*KSSTKA
Trigger: AGCCTTTGTGGAACTCTTTCATGAGATTGATGACCG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTAGAAATGCCCAGGTCTaGGAGCCGGTCATCAATCTC +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFRNAQV*EPVINL
Trigger: GAGATTGATGACCGGCTCTCAGACCTGGGCATTTCT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTCTCTTCGGCCACCTTaGGGAATATTTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSLRPP*GIFLPG
Trigger: CCCTGGAAGAAATATTCCTCAAGGTGGCCGAAGAGA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCAGCATCATCTTCAGTaGACGGGCGAAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFQHHLQ*TGEDSS
Trigger: AGAGCTGTCTTCGCCCGTTCACTGAAGATGATGCTG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCTGATCTCCCCTCCTTaGCAACACTTAGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTLISPP*QHLGHN
Trigger: ATTGTGCCCTAAGTGTTGTCAAGGAGGGGAGATCAG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTGCGCATGTCCTTCATaGTGGTGTCTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQCACPS*WCLSGC
Trigger: ACAGCCAGAAAGACACCAGCATGAAGGACATGCGCA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAAGAGTCCCAAGACTATaGAGCAATGTTTTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPRVPRL*SNVFVA
Trigger: AGCCACAAAAACATTGCTGCATAGTCTTGGGACTCT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAGATATGGTCCGGATTaGCTGGTTAGTCTCGTTGAA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRRYGPD*LVSLVE
Trigger: TTCAACGAGACTAACCAGGCAATCCGGACCATATCT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACACGTAGTCCTGCCATaGCACACACAGGACGTAGGG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKHVVLP*HTQDVG
Trigger: CCCTACGTCCTGTGTGTGGCATGGCAGGACTACGTG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCACCAGTAGGACTTGGTaGAAGGAAAATACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTTSRTW*KENTRA
Trigger: GGCCCTGGTATTTTCCTTGCACCAAGTCCTACTGGT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAACATCCAGGGCCATCTaGTCCATCTCCGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGTSRAI*SISAFT
Trigger: CGTGAAGGCGGAGATGGAGCAGATGGCCCTGGATGT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGCTCCCATATTCCCCTaGGGGAGTAAGGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGAPIFP*GSKGPH
Trigger: GTGTGGACCCTTACTCCCGCAGGGGAATATGGGAGC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAGAGCTTGCGTTTGTTaGCTCCACTATAGTTACCAG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRRACVC*LHYSYQ
Trigger: CTGGTAACTATAGTGGAGGCAACAAACGCAAGCTCT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGACAGCAGGGACGCCGTaGCTGGTCATTAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQTAGTP*LVINCF
Trigger: AAAACAGTTAATGACCAGCCACGGCGTCCCTGCTGT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATATGTTGTTCATAGGGTaGGTAGCTCAGCCGAACAGA +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNMLFIG*VAQPNR
Trigger: TCTGTTCGGCTGAGCTACCCACCCTATGAACAACAT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGCATGTCCTTCATGCTaGTGTCTTTCTGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRACPSC*CLSGCI
Trigger: TATACAGCCAGAAAGACACCAGCATGAAGGACATGC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCAGGATGTCCATGTTaGAACGAAGTACTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSGCPC*NEVLAL
Trigger: CAGAGCGAGTACTTCGTTCCAACATGGACATCCTGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTGGAGCTGTTCACATTaGTCAGAAACATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRWSCSH*SETSPP
Trigger: AGGAGGTGATGTTTCTGACCAATGTGAACAGCTCCA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGACAAGGTCCATTTCTTaGCTGTTCTCCATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRTRSIS*LFSMKV
Trigger: GACCTTCATGGAGAACAGCCAAGAAATGGACCTTGT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAAGACTTCTGTTGCTATaGGTTCTAGCTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPRLLLL*VLACSG
Trigger: ACCTGAACAAGCTAGAACCCATAGCAACAGAAGTCT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAACGCCCAGCTTCAAGTaGGTGGGTTCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKTPSFK*VGSSSM
Trigger: CATGGAGGAGGAACCCACCCACTTGAAGCTGGGCGT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGATGGTCTGGGGAACTaGGGCAGTGGTCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGDGLGN*GSGPLF
Trigger: GAAGAGTGGACCACTGCCCCAGTTCCCCAGACCATC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTTGCTGACCCGCTCCTaGATCAGGAATACGACAAAG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLLTRS*IRNTTK
Trigger: CTTTGTCGTATTCCTGATCCAGGAGCGGGTCAGCAA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGCACAGGCAGATTGGTaGAGGACACATAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTAQADW*RTHRTS
Trigger: AGAAGTCCTATGTGTCCTCCACCAATCTGCCTGTGC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCTAGCACAGGCAGATTaGTGGAGGACACATAGGACT +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLAQAD*WRTHRT
Trigger: AGTCCTATGTGTCCTCCACCAATCTGCCTGTGCTAG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAGTCGCTTTTTGCTCTaGGAGAGGATGCTGAATATC +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRSRFLL*ERMLNI
Trigger: GATATTCAGCATCCTCTCCCAGAGCAAAAAGCGACT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCACAATACCCTTGGCTaGAAACAGGGAAACACTCAC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNHNTLG*KQGNTH
Trigger: GTGAGTGTTTCCCTGTTTCCAGCCAAGGGTATTGTG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAAGCCTCCGAGCATCTaGGAACAGGCGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMKPPSI*EQASHN
Trigger: ATTGTGGCTCGCCTGTTCTCAGATGCTCGGAGGCTT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCCACCAGGAAATCTTaGAGCTTCAAGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSTRKS*SFKFEL
Trigger: CAGCTCAAACTTGAAGCTTCAAGATTTCCTGGTGGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp GAAATCAATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACGGGAGAGAGAGGTTGTaGTACAGGAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: EINFILTSWPMTPGCIFHGRERL*YRNPEK
Trigger: CTTCTCTGGGTTCCTGTATCACAACCTCTCTCTCCC...GTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATTGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAATTCCTAACTTCAGGATaGCCACTAGCAGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKFLTSG*PLAGQR
Trigger: GCGCTGGCCTGCTAGTGGTCATCCTGAAGTTAGGAA...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCTCCTTTTTCAGGTATaGCACAGTGCTACTACTGTT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRLLFQV*HSATTV
Trigger: AACAGTAGTAGCACTGTGTCATACCTGAAAAAGGAG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCTTCCTGTCAGGTCCTaGAGGATATCTGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLPVRS*RISAVF
Trigger: AAACACTGCAGATATCCTTCAGGACCTGACAGGAAG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAAATGTCATGAGATCCTaGCCATCACATTGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPNVMRS*PSHCFL
Trigger: TAGAAAGCAATGTGATGGTCAGGATCTCATGACATT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAATAGCAGAGACATCTTaGGTCAGCGCCACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKIAETS*VSATSL
Trigger: GAGGCTGGTGGCGCTGACTCAAGATGTCTCTGCTAT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTTCCACTTTTGTGTTTaGGTCTCTTTCTCCTACCCC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNFHFCV*VSFSYP
Trigger: GGGGTAGGAGAAAGAGACGCAAACACAAAAGTGGAA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp GGGTTTATTCATTTCTTTCCAGTAGCTGCACAACGTAATTGCCATCAGCCCTACTGCGCATGTCCTTCATaGTGGTGTCTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GFIHFFPVAAQRNCHQPYCACPS*WCLSGC
Trigger: ACAGCCAGAAAGACACCAGCATGAAGGACATGCGCA...GTAGGGCTGATGGCAATTACGTTGTGCAGCTACTGGAAAGAAATGAATAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTGCGCATGTCCTTCATaGTGGTGTCTTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFCACPS*WCLSGC
Trigger: ACAGCCAGAAAGACACCAGCATGAAGGACATGCGCA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATATGTTCTCAGAACTTTaGGCATGTCCTTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNMFSEL*ACPSCW
Trigger: CCAGCATGAAGGACATGCGCAAAGTTCTGAGAACAT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACCCCCTCCCTCGGGATaGCCGCAGACAATACGAGAC +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKPPPSG*PQTIRD
Trigger: GTCTCGTATTGTCTGCGGGCATCCCGAGGGAGGGGG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCTTCCTCAGTGCCATTaGCTCCAAAGAGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLPQCH*LQRGLC
Trigger: ACAAAGCCCTCTTTGGAGGCAATGGCACTGAGGAAG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATGGACATCCTCTGGGTaGTTGGCCAAAAACGCCACG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGWTSSG*LAKNAT
Trigger: CGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTGCACTCCAATGCCCTaGTCCTCAAAAAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFCTPMP*SSKRAK
Trigger: CTTTGCCCTTTTTGAGGAGCAGGGCATTGGAGTGCA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACCCACTGCACTCCAATaGCCTGCTCCTCAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKPTALQ*PAPQKG
Trigger: CCCTTTTTGAGGAGCAGGGCATTGGAGTGCAGTGGG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCCCACTGCACTCCAATaGCCTGCTCCTCAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMPTALQ*PAPQKG
Trigger: CCCTTTTTGAGGAGCAGGGCATTGGAGTGCAGTGGG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCTCATAAAAATTCAGTaGCAGGCCATCGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTLIKIQ*QAIDSH
Trigger: GTGGCTGTCGATGGCCTGGCACTGAATTTTTATGAG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCACCCACATTTTTGTTaGATGTTACTGCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRHPHFC*MLLPPE
Trigger: TTCTGGTGGCAGTAACATGCAACAAAAATGTGGGTG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGATCTCTTTAATCCCATaGCCTGGCTTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQISLIP*PGFSSL
Trigger: CAAGCTGCTGAAGCCAGGGCATGGGATTAAAGAGAT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCTTGGCACAGTTAACTaGCCATGTGCAATGTCATCA +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNLGTVN*PCAMSS
Trigger: TGATGACATTGCACATGGGCAGTTAACTGTGCCAAG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGATGTTGTTCATAGGGTaGGTAGCTCAGCCGAACAGA +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQMLFIG*VAQPNR
Trigger: TCTGTTCGGCTGAGCTACCCACCCTATGAACAACAT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTTCCTGCAGAGGGCATaGCTTTATTTGGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNFLQRA*LYLENG
Trigger: GCCATTTTCCAAATAAAGCCATGCCCTCTGCAGGAA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGCATGTCCTTCATGCTaGTGTCTTTCTGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNACPSC*CLSGCI
Trigger: TATACAGCCAGAAAGACACCAGCATGAAGGACATGC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTGCAAAAATACCTTGTaGAGAATGACATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRCKNTL*RMTSAL
Trigger: GAGGGCTGATGTCATTCTCCACAAGGTATTTTTGCA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTCAGGATGTCCATGTTaGAACGAAGTACTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSGCPC*NEVLAL
Trigger: CAGAGCGAGTACTTCGTTCCAACATGGACATCCTGA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCACACAGAACCATTACTaGACTGGACATCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTTQNHY*TGHPLG
Trigger: ACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCAGCTCAATGCTGCCTaGAGTAATTCCAGTGAACAC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTQLNAA*SNSSEH
Trigger: GTGTTCACTGGAATTACTCCAGGCAGCATTGAGCTG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTTACCAGGTTCTGAATaGACACGCCCAGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTLPGSE*TRPASS
Trigger: ACTTGAAGCTGGGCGTGTCCATTCAGAACCTGGTAA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACCAGGTTCTGCCGGATaGTGCTCATCTCAGAGCGAA +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGPGSAG*CSSQSE
Trigger: TTCGCTCTGAGATGAGCACCATCCGGCAGAACCTGG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCTTAGCAGCTTCATATaGCAGCACATAGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLSSFI*QHIGQL
Trigger: GAGCTGACCTATGTGCTGCCATATGAAGCTGCTAAG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCTTAGCAGCTTCATATaGCAGCACATAGGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTLSSFI*QHIGQL
Trigger: GAGCTGACCTATGTGCTGCCATATGAAGCTGCTAAG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGCTGAAGTTCCAGGCTaGGGTACTTGCCAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGAEVPG*GTCQRV
Trigger: CACCCTTTGGCAAGTACCCCAGCCTGGAACTTCAGC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGCTGAAGTTCCAGGCTaGGGTACTTGCCAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMAEVPG*GTCQRV
Trigger: CACCCTTTGGCAAGTACCCCAGCCTGGAACTTCAGC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCTGGCAGGGCGTGTCTaGGATTGGGTTTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMLAGRV*DWVSFH
Trigger: ATGGAAGGAAACCCAATCCCAGACACGCCCTGCCAG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGAACACAAAGGAGGCTaGGTACATGAGAGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTEHKGG*VHERCD
Trigger: ATCACACCTCTCATGTACCCAGCCTCCTTTGTGTTC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATCTAAGATGTCATTCTaGCCTCCACCATCAAGAATT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPSKMSF*PPPSRI
Trigger: AATTCTTGATGGTGGAGGCCAGAATGACATCTTAGA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCACATCCATCAGGATTaGCTTCAGGATGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNHIHQD*LQDVHV
Trigger: AACATGGACATCCTGAAGCCAATCCTGATGGATGTG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAACTCACAATACCCTTaGCTGGAAACAGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNNSQYP*LETGKH
Trigger: GTGTTTCCCTGTTTCCAGCCAAGGGTATTGTGAGTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAGGAGCAAAGCGCCCTaGGAACCGGCTCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCRSKAP*EPALLV
Trigger: CACCAACAGAGCCGGTTCTCAGGGCGCTTTGCTCCT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTACTTCCAGCAGCAGCTaGCATGTTTGTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFTSSSS*HVCLLL
Trigger: CAGAAGAAGACAAACATGTCAGCTGCTGCTGGAAGT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTATCTTGTACTTGACATaGTGGGGCAGCTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFILYLT*WGSSML
Trigger: CAGCATTGAGCTGCCCCATCATGTCAAGTACAAGAT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTTCGGATCTTGTACTTaGCATGATGGGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFFGSCT*HDGAAQ
Trigger: TTGAGCTGCCCCATCATGTCAAGTACAAGATCCGAA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGATGATCACAGCCACTaGGTAAATCCAGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGDDHSH*VNPGQR
Trigger: ACGCTGGCCTGGATTTACTCAGTGGCTGTGATCATC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATGTTGTCCAGGCCCATaGTCCGCATGGTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGCCPGP*SAWSLS
Trigger: TGAAAGAGACCATGCGGATCATGGGCCTGGACAACA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCATTCCACATCTTTCTTaGCCAAGGTCAGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTIPHLS*PRSGSS
Trigger: GCTACTACCTGACCTTGGTCAAGAAAGATGTGGAAT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCGGTCATCAATCTCATaGAAGAGTTCCACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTRSSIS*KSSTKA
Trigger: AGCCTTTGTGGAACTCTTTCATGAGATTGATGACCG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAGAAATGCCCAGGTCTaGGAGCCGGTCATCAATCTC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKRNAQV*EPVINL
Trigger: GAGATTGATGACCGGCTCTCAGACCTGGGCATTTCT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTTCCAGGGTCGTCTCTaGGATGCCATAACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQFQGRL*DAITRN
Trigger: ATTTCTAGTTATGGCATCTCAGAGACGACCCTGGAA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCAGGAGCATCATTGCTaGCAAATGTGTACTGTTCGT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTQEHHC*QMCTVR
Trigger: ACGAACAGTACACATTTGTCAGCAATGATGCTCCTG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAGCCAGGGTCTTTGGTaGGGGCGTTTAAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSQGLW*GRLRVP
Trigger: TGGAACTCTTAAACGCCCTCACCAAAGACCCTGGCT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTTAAGCTTTTGGCTATaGTCTGCACATACGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRLSFWL*SAHTSS
Trigger: TGAAGACGTATGTGCAGATCATAGCCAAAAGCTTAA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATCTTCGTCAACTCCTTaGTTTCTAAGATGTCATTCT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPSSSTP*FLRCHS
Trigger: AGAATGACATCTTAGAAATCAAGGAGTTGACGAAGA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAATGTCATGAGATCCTaGCCATCACATTGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRNVMRS*PSHCFL
Trigger: TAGAAAGCAATGTGATGGTCAGGATCTCATGACATT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATTTAAAATATGGCCTTaGAATCAGAGGAACCGAAGT +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPFKIWP*NQRNRS
Trigger: ACTTCGGTTCCTCTGATTTCAAGGCCATATTTTAAA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAGTGGTCATTGTCCCTaGTGTCCAACAGCATCCGGA +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSGHCP*CPTASG
Trigger: TCCGGATGCTGTTGGACAGCAGGGACAATGACCACT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCTAATCAGGAAGCACTaGAGGATTGTCACCACAGCA +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLIRKH*RIVTTA
Trigger: TGCTGTGGTGACAATCCTGCAGTGCTTCCTGATTAG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGATCTCCGCCTTCACGTaGTTCTCAGAGAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMISAFT*FSESPF
Trigger: GAAAGGGCTCTCTGAGAAGCACGTGAAGGCGGAGAT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACGGGCTTCAGACACATaGTTCCTGATGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGRASDT*FLMRLE
Trigger: CTCCAACCTCATCAGGAAGCATGTGTCTGAAGCCCG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTAGGGCCACAAACTGTTaGTGTGTAAGTTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFRATNC*CVSFQP
Trigger: AGGCTGGAAACTTACACAGCAACAGTTTGTGGCCCT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGAACTGCAGGTGTTTTaGTTTGCTGACCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMELQVF*FADPLL
Trigger: CAGGAGCGGGTCAGCAAAGCAAAACACCTGCAGTTC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCAGGGACAACGTAATTaGACATATCCCAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRQGQRN*TYPRQN
Trigger: ATTTTGTCTGGGATATGTGCAATTACGTTGTCCCTG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGAGGCTACAAAGGCACTaGCCCTGTAATGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQRLQRH*PCNGIL
Trigger: CAAAATTCCATTACAGGGGCAGTGCCTTTGTAGCCT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCTGGATGGTTTGGCAATTCCTGCCTGAATAGGGAAGTAAAATTAAGTGAAGTTCCCATGACGCCAGGTTaGATATTCCACTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PGWFGNSCLNREVKLSEVPMTPG*IFHSWM
Trigger: CATCCAGGAGTGGAATATGCAACCTGGCGTCATGGG...AACTTCACTTAATTTTACTTCCCTATTCAGGCAGGAATTGCCAAACCATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATATACTTTCCCCATGTTaGCAAAACACTGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNILSPC*QNTAFQ
Trigger: CTGGAAAGCAGTGTTTTGGCAACATGGGGAAAGTAT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCAGGGACGCCGTGGCTaGTCATTAACTGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMQGRRG*SLTVFH
Trigger: GTGGAAAACAGTTAATGACCAGCCACGGCGTCCCTG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTGGGCATGGCTTTATTTaGAAAATGGCATTCATGTTG +
Preference number: 4 (lower is better)
Translates to: YFNQLAHDARLHIPLLDGGHGFI*KMAFML
Trigger: CAACATGAATGCCATTTTCCAAATAAAGCCATGCCC...ACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CCA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGGGCATGGCTTTATTTaGAAAATGGCATTCATGTTG +
Preference number: 4 (lower is better)
Translates to: AVAILLYTTGFYKEAILRGHGFI*KMAFML
Trigger: CAACATGAATGCCATTTTCCAAATAAAGCCATGCCC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTTCCTGCAGAGGGCATaGCTTTATTTGGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTFLQRA*LYLENG
Trigger: GCCATTTTCCAAATAAAGCCATGCCCTCTGCAGGAA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGGCATGTCCTTCATGCTaGTGTCTTTCTGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQACPSC*CLSGCI
Trigger: TATACAGCCAGAAAGACACCAGCATGAAGGACATGC...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTGCAAAAATACCTTGTaGAGAATGACATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNCKNTL*RMTSAL
Trigger: GAGGGCTGATGTCATTCTCCACAAGGTATTTTTGCA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAATGCTGAACAGCTCCTaGGCCAGAGTCCCAAGACTA +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKMLNSS*ARVPRL
Trigger: TAGTCTTGGGACTCTGGCCCAGGAGCTGTTCAGCAT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTATGGTCCGGATTGCCTaGTTAGTCTCGTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFMVRIA*LVSLKA
Trigger: AGCTTTCAACGAGACTAACCAGGCAATCCGGACCAT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACTGGGAATTCCGTACTaGCCTGGAAAGACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKLGIPY*PGKTAS
Trigger: TGAGGCTGTCTTTCCAGGCCAGTACGGAATTCCCAG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATCAGGATTGACATGGTaGTCGTCTTCCCCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSGLTW*SSSPLH
Trigger: ATGGAGCGGGGAAGACGACCACCATGTCAATCCTGA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCATTCCACCTGACAGCTaGCTTGTTTTGCTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTIPPDS*LVLLFS
Trigger: GCTGAAAAGCAAAACAAGCCAGCTGTCAGGTGGAAT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGCTTCAGGTCCGGGTTaGACCCTGCTATTCGTACAA +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGASGPG*TLLFVQ
Trigger: TTGTACGAATAGCAGGGTCCAACCCGGACCTGAAGC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAAGTCCAAAGAAATCCTaGACAGGCTTCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSPKKS*TGFRSG
Trigger: CCCGGACCTGAAGCCTGTCCAGGATTTCTTTGGACT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAGTCCAAAGAAATCCTaGACAGGCTTCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSPKKS*TGFRSG
Trigger: CCCGGACCTGAAGCCTGTCCAGGATTTCTTTGGACT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGAGTCGCTTTTTGCTCTaGGAGAGGATGCTGAATATC +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQSRFLL*ERMLNI
Trigger: GATATTCAGCATCCTCTCCCAGAGCAAAAAGCGACT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACCAGTCTCCTGGGCATaGCATGGCTTAGTGAATGAG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKPVSWA*HGLVNE
Trigger: CTCATTCACTAAGCCATGCCATGCCCAGGAGACTGG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGACAGTCAGGACAAATaGGCACAGGCTTCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMDSQDK*AQASLG
Trigger: ACCTAGGGAAGCCTGTGCCCATTTGTCCTGACTGTC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
3UTR CAA 72 bp CAATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTaGCATATTCCACTCCTGGATGGTTTGGCAATTCCT +
Preference number: 4 (lower is better)
Translates to: QFYFNQLAHDAR*HIPLLDGLAIP
Trigger: AGGAATTGCCAAACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTTGAGCTGGATTTCTTaGTCTGCTGTAATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNLSWIS*SAVMFS
Trigger: TGAGAACATTACAGCAGATCAAGAAATCCAGCTCAA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTTGAAGCTTCAAGTTTaGGCTGGATTTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNLKLQV*AGFLDL
Trigger: CAGATCAAGAAATCCAGCTCAAACTTGAAGCTTCAA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR TCA 90 bp GGGTTTATTCATTTCTTTCCAGTAGCTGCACAACGTAATTGCCATCAGCCCTACTCCACCAGGAAATCTTaGAGCTTCAAGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GFIHFFPVAAQRNCHQPYSTRKS*SFKFEL
Trigger: CAGCTCAAACTTGAAGCTTCAAGATTTCCTGGTGGA...GTAGGGCTGATGGCAATTACGTTGTGCAGCTACTGGAAAGAAATGAATAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTGTTCACCTCAGCCATaGCCTGCCTTGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCCSPQP*PALWLE
Trigger: CTCCAGCCACAAGGCAGGTCATGGCTGAGGTGAACA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCCAGATCTTGGGGCTaGGTTCCTCCCACATGCCTT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSRSWG*VPPTCL
Trigger: AAGGCATGTGGGAGGAACTCAGCCCCAAGATCTGGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCCCAGTACCCATCCTTaGTTTTATTTGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFPSTHP*FYLSSP
Trigger: TGGAGAGGACAAATAAAATCAAGGATGGGTACTGGG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAACTTTTACCAGGTTCTaGATGGACACGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKTFTRF*MDTPSF
Trigger: GAAGCTGGGCGTGTCCATTCAGAACCTGGTAAAAGT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCTGGAAGAGGTCCATaGTGGTCTGGGGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISGRGP*WSGELG
Trigger: CCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGGTGTTTTGCTTTGCTaGCCCGCTCCTGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLGVLLC*PAPGSG
Trigger: TCCTGATCCAGGAGCGGGTCAGCAAAGCAAAACACC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTCAGCTTATTGTCGGTaGACAGCTCCAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSAYCR*TAPAQR
Trigger: CCTTTGTGCTGGAGCTGTTCACCGACAATAAGCTGA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACTGATCTCCCCTCCTTaGCAACACTTAGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKLISPP*QHLGHN
Trigger: ATTGTGCCCTAAGTGTTGTCAAGGAGGGGAGATCAG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGCATGGCTTAGTGAATaGGGATGTGCATTACCTTTT +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTAWLSE*GCALPF
Trigger: AAAAGGTAATGCACATCCTCATTCACTAAGCCATGC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTGTAAACCAGTGAGCTaGATAACATGGCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFCKPVS*ITWHRK
Trigger: CTTCCTGTGCCATGTTATTCAGCTCACTGGTTTACA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTATGTTCTCAGAACTTTaGGCATGTCCTTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFMFSEL*ACPSCW
Trigger: CCAGCATGAAGGACATGCGCAAAGTTCTGAGAACAT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGGTCTCTTTCAGCCGTaGCTCCTTCTCATACACGAT +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGGLFQP*LLLIHD
Trigger: ATCGTGTATGAGAAGGAGGCACGGCTGAAAGAGACC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAACCAGTAGGACTTGGTaGAAGGAAAATACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGTSRTW*KENTRA
Trigger: GGCCCTGGTATTTTCCTTGCACCAAGTCCTACTGGT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCACTCTCATGGTCGCTaGCCAGGCCAGCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCHSHGR*PGQHQN
Trigger: GTTCTGATGCTGGCCTGGGCAGCGACCATGAGAGTG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCCAGGCTGGGGTACTTaGCAAAGGGTGGCACGATCA +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCPGWGT*QRVARS
Trigger: TGATCGTGCCACCCTTTGGCAAGTACCCCAGCCTGG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGCAGGTGAAGGGTTCTaGATTGTCCAGTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMAGEGF*IVQFPF
Trigger: GAATGGGAACTGGACAATGCAGAACCCTTCACCTGC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGAAAAGATGTGAGAACTaGAACGTCCACTACTGTCTG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQKRCEN*NVHYCL
Trigger: CAGACAGTAGTGGACGTTGCAGTTCTCACATCTTTT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGAACCAAGTTTCCCGTaGCTGGAGACACCCACATTT +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKEPSFP*LETPTF
Trigger: AAATGTGGGTGTCTCCAGGCACGGGAAACTTGGTTC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTGGCTGTTGATTCTTTaGCTCTTACCAGGATCTAAG +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTWLLIL*LLPGSK
Trigger: CTTAGATCCTGGTAAGAGGCAAAGAATCAACAGCCA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACTGGCTTCAGCAGCTTaGAGCCCCAGCAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLASAA*SPSSLA
Trigger: AGCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCTGGCTTCAGCAGCTTaGAGCCCCAGCAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCLASAA*SPSSLA
Trigger: AGCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGAAGATACTGTAAAATaGAACGATGCCATATCACTA +
Preference number: 4 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPEDTVK*NDAISL
Trigger: TAGTGATATGGCATCGTTGCATTTTACAGTATCTTC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGGGCATGGCTTTATTTaGAAAATGGCATTCATGTTG +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNGHGFI*KMAFML
Trigger: CAACATGAATGCCATTTTCCAAATAAAGCCATGCCC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CCA 90 bp ACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATTTCTTTTCCTGCAGAGGGCATaGCTTTATTTGGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: TTSLPFTTITRTRVYSFLFLQRA*LYLENG
Trigger: GCCATTTTCCAAATAAAGCCATGCCCTCTGCAGGAA...AAGAAATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CCA 90 bp ACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATTTCTTGCATGTCCTTCATGCTaGTGTCTTTCTGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: TTSLPFTTITRTRVYSFLACPSC*CLSGCI
Trigger: TATACAGCCAGAAAGACACCAGCATGAAGGACATGC...AAGAAATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGCAGCAATGTTTTTGTaGCTTCAGCCAGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKAAMFL*LQPAPC
Trigger: GCAAGGAGCTGGCTGAAGCCACAAAAACATTGCTGC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGCAGCAATGTTTTTGTaGCTTCAGCCAGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMAAMFL*LQPAPC
Trigger: GCAAGGAGCTGGCTGAAGCCACAAAAACATTGCTGC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAATGCCTTCCAGATCATaGAACACAGCCAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKMPSRS*NTASSW
Trigger: CCAGGAACTGGCTGTGTTCCATGATCTGGAAGGCAT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGATGCCTTCCAGATCATaGAACACAGCCAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMMPSRS*NTASSW
Trigger: CCAGGAACTGGCTGTGTTCCATGATCTGGAAGGCAT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGAACCATTACTGGACTaGACATCCTCTGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKEPLLD*TSSGCL
Trigger: CAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTGGTTGGAACCAGGGTaGCTCTTCTCATCACTTTCC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMWLEPG*LFSSLS
Trigger: GGAAAGTGATGAGAAGAGCCACCCTGGTTCCAACCA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTATATTCTCTTCTGGTTaGAACCAGGGTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFIFSSG*NQGGSS
Trigger: AGAAGAGCCACCCTGGTTCCAACCAGAAGAGAATAT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCGGTCAGGATTGACATaGTGGTCGTCTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCRSGLT*WSSSPL
Trigger: GAGCGGGGAAGACGACCACCATGTCAATCCTGACCG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACTTTCCGACTCCGTCTaGCAATTAGCAGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGLSDSV*QLAVSS
Trigger: GGAAGAGACTGCTAATTGCCAGACGGAGTCGGAAAG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGGGCGTGTCTGGGATTaGGTTTCCTTCCATACAGCG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLGRVWD*VSFHTA
Trigger: CGCTGTATGGAAGGAAACCCAATCCCAGACACGCCC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCGATGGTCTGGGGAACTaGGGCAGTGGTCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCDGLGN*GSGPLF
Trigger: GAAGAGTGGACCACTGCCCCAGTTCCCCAGACCATC...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAGGTCCATGATGGTCTaGGGAACTGGGGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCRSMMV*GTGAVV
Trigger: GACCACTGCCCCAGTTCCCCAGACCATCATGGACCT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAAGGTCCATGATGGTCTaGGGAACTGGGGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIRSMMV*GTGAVV
Trigger: GACCACTGCCCCAGTTCCCCAGACCATCATGGACCT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGTCCAGTTCCCATTCTaGAAGAGGTCCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGVQFPF*KRSMMV
Trigger: GACCATCATGGACCTCTTCCAGAATGGGAACTGGAC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGTCCAGTTCCCATTCTaGAAGAGGTCCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMVQFPF*KRSMMV
Trigger: GACCATCATGGACCTCTTCCAGAATGGGAACTGGAC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAATTGCTGACCCGCTCCTaGATCAGGAATACGACAAAG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKLLTRS*IRNTTK
Trigger: CTTTGTCGTATTCCTGATCCAGGAGCGGGTCAGCAA...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCTAGCACAGGCAGATTaGTGGAGGACACATAGGACT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMLAQAD*WRTHRT
Trigger: AGTCCTATGTGTCCTCCACCAATCTGCCTGTGCTAG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGCCAACTTCTTTCTCTaGGACTCCTCTCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGANFFL*DSSQKG
Trigger: GCCCTTTTGAGAGGAGTCCCAGAGAAAGAAGTTGGC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGCCAACTTCTTTCTCTaGGACTCCTCTCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKANFFL*DSSQKG
Trigger: GCCCTTTTGAGAGGAGTCCCAGAGAAAGAAGTTGGC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATCCATGCCTGTGGTaGGTTCATCCAGAAACACCA +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMDPCLW*VHPETP
Trigger: TGGTGTTTCTGGATGAACCCACCACAGGCATGGATC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGACGTCCACTACTGTCTaGTTTTTGTGTAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQTSTTV*FLCNER
Trigger: CCTCTCATTACACAAAAACCAGACAGTAGTGGACGT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGACTCATTGCCAGCAATaGATGTGTCACCGGGAAACC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMTHCQQ*MCHRET
Trigger: GGTTTCCCGGTGACACATCCATTGCTGGCAATGAGT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAACTCATTGCCAGCAATaGATGTGTCACCGGGAAACC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKTHCQQ*MCHRET
Trigger: GGTTTCCCGGTGACACATCCATTGCTGGCAATGAGT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAGCAGCAACCTCAGCTaGGGCCAACAAGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSSNLS*GQQAMF
Trigger: GAACATGGCTTGTTGGCCTCAGCTGAGGTTGCTGCT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAAGCCTCCGAGCATCTaGGAACAGGCGAGCCACAAT +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCKPPSI*EQASHN
Trigger: ATTGTGGCTCGCCTGTTCTCAGATGCTCGGAGGCTT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGTTGAAGCTTCAAGTTTaGGCTGGATTTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: QFYFNQLAHDARLHIPLLLKLQV*AGFLDL
Trigger: CAGATCAAGAAATCCAGCTCAAACTTGAAGCTTCAA...CAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGGGAGAGAGAGGTTGTaGTACAGGAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLGRERL*YRNPEK
Trigger: CTTCTCTGGGTTCCTGTATCACAACCTCTCTCTCCC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAATCTTGTACTTGACATaGTGGGGCAGCTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGILYLT*WGSSML
Trigger: CAGCATTGAGCTGCCCCATCATGTCAAGTACAAGAT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAATTCGGATCTTGTACTTaGCATGATGGGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKFGSCT*HDGAAQ
Trigger: TTGAGCTGCCCCATCATGTCAAGTACAAGATCCGAA...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGCTTTTCAGCTTGCTTaGTGGCAAACCAACATCCAG +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGAFQLA*WQTNIQ
Trigger: CTGGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCAGCATCATCTTCAGTaGACGGGCGAAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLQHHLQ*TGEDSS
Trigger: AGAGCTGTCTTCGCCCGTTCACTGAAGATGATGCTG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTGCCATCCATCCCACTaGGCAAGTCTGTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCCHPSH*ASLSLW
Trigger: CCAGAGAGACAGACTTGCTCAGTGGGATGGATGGCA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACAGGCAGCATCTTCTTaGTTTTGTCGCTGCTACACT +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGQAASS*FCRCYT
Trigger: AGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAGATGTAAGCACTACTaGTCTCCCCTCCTTGACAAC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKRCKHY*SPLLDN
Trigger: GTTGTCAAGGAGGGGAGATCAGTAGTGCTTACATCT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAGATGTAAGCACTACTaGTCTCCCCTCCTTGACAAC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMRCKHY*SPLLDN
Trigger: GTTGTCAAGGAGGGGAGATCAGTAGTGCTTACATCT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCTGGGAGAGGATGCTaGATATCCTGGCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSGRGC*ISWPEK
Trigger: CTTCTCTGGCCAGGATATTCAGCATCCTCTCCCAGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGGCACTAGTCATGACTaGTATGCAAACTTACATAAG +
Preference number: 4 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTGTSHD*YANLHK
Trigger: CTTATGTAAGTTTGCATATCAGTCATGACTAGTGCC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTGGTTCAGTATTACATaGCACATGGCTCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQWFSIT*HMALWK
Trigger: TTTCCAAAGAGCCATGTGTCATGTAATACTGAACCA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCACCTTTTTCAGGTATaGCACAGTGCTACTACTGTT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFHLFQV*HSATTV
Trigger: AACAGTAGTAGCACTGTGTCATACCTGAAAAAGGTG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCAGCATCTTCCTCAGTaGCATTGCCTCCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLQHLPQ*HCLQRG
Trigger: CCCTCTTTGGAGGCAATGGCACTGAGGAAGATGCTG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAAGGGCCACAAACTGTTaGTGTGTAAGTTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGRATNC*CVSFQP
Trigger: AGGCTGGAAACTTACACAGCAACAGTTTGTGGCCCT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGTTGAGAAATCGATCTaGAGAACTGTCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKVEKSI*RTVLGQ
Trigger: CTGGCCAAGGACAGTTCTGCAGATCGATTTCTCAAC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCGGGTTCTCTCCCTTTTaGAGGTTGGCCCGGAGAATG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCGFSPF*RLARRM
Trigger: CATTCTCCGGGCCAACCTGCAAAAGGGAGAGAACCC...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGCCACCTCTGAGAGCTaGTGCTTGGTGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKATSES*CLVRFR
Trigger: CCTGAATCTCACCAAGCAGCAGCTCTCAGAGGTGGC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGTCCGGGTTGGACCCTaGTATTCGTACAACTATTGT +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKVRVGP*YSYNYC
Trigger: ACAATAGTTGTACGAATAGCAGGGTCCAACCCGGAC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGTCCGGGTTGGACCCTaGTATTCGTACAACTATTGT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMVRVGP*YSYNYC
Trigger: ACAATAGTTGTACGAATAGCAGGGTCCAACCCGGAC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTATGCTGAACAGCTCCTaGGCCAGAGTCCCAAGACTA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLMLNSS*ARVPRL
Trigger: TAGTCTTGGGACTCTGGCCCAGGAGCTGTTCAGCAT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGAAAATACCAGGGCCTaGGAATTCCGTACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLENTRA*EFRTGL
Trigger: CAGGCCAGTACGGAATTCCCAGGCCCTGGTATTTTC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACCAGCTTCAAGTGGGTaGGTTCCTCCTCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIPASSG*VPPPCR
Trigger: TCTGCATGGAGGAGGAACCCACCCACTTGAAGCTGG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCAGGATTGACATGGTaGTCGTCTTCCCCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSGLTW*SSSPLH
Trigger: ATGGAGCGGGGAAGACGACCACCATGTCAATCCTGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTCCGCTTCATCCATGTaGTGTGTAGAGAGAATAATG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSASSM*CVERIM
Trigger: CATTATTCTCTCTACACACCACATGGATGAAGCGGA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACTGCAGAACTGTCCTTaGCCAGCTTTAGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKLQNCP*PALGVS
Trigger: AGAAACACCTAAAGCTGGCCAAGGACAGTTCTGCAG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACTGCAGAACTGTCCTTaGCCAGCTTTAGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGLQNCP*PALGVS
Trigger: AGAAACACCTAAAGCTGGCCAAGGACAGTTCTGCAG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCTCCCTTTTGCAGGTTaGCCCGGAGAATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLLPFAG*PGEWHC
Trigger: ACAATGCCATTCTCCGGGCCAACCTGCAAAAGGGAG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGAACACAAAGGAGGCTaGGTACATGAGAGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKEHKGG*VHERCD
Trigger: ATCACACCTCTCATGTACCCAGCCTCCTTTGTGTTC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTCTAAGATGTCATTCTaGCCTCCACCATCAAGAATT +
Preference number: 4 (lower is better)
Translates to: AILLYTTGFYKEAILRIQSKMSF*PPPSRI
Trigger: AATTCTTGATGGTGGAGGCCAGAATGACATCTTAGA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATCAATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCTGCATATTCCACTCCTaGATGGTTTGGCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: NQFYFNQLAHDARLHIPLCIFHS*MVWQFL
Trigger: CAGGAATTGCCAAACCATCCAGGAGTGGAATATGCA...GAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp ACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATTTCTTTTGAGCTGGATTTCTTaGTCTGCTGTAATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TTSLPFTTITRTRVYSFLLSWIS*SAVMFS
Trigger: TGAGAACATTACAGCAGATCAAGAAATCCAGCTCAA...AAGAAATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTTGAAGCTTCAAGTTTaGGCTGGATTTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLKLQV*AGFLDL
Trigger: CAGATCAAGAAATCCAGCTCAAACTTGAAGCTTCAA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTCCACCAGGAAATCTTaGAGCTTCAAGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSTRKS*SFKFEL
Trigger: CAGCTCAAACTTGAAGCTTCAAGATTTCCTGGTGGA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGGGAGAGAGAGGTTGTaGTACAGGAACCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKGRERL*YRNPEK
Trigger: CTTCTCTGGGTTCCTGTATCACAACCTCTCTCTCCC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGATGATCACAGCCACTaGGTAAATCCAGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKDDHSH*VNPGQR
Trigger: ACGCTGGCCTGGATTTACTCAGTGGCTGTGATCATC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATGTTGTCCAGGCCCATaGTCCGCATGGTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKCCPGP*SAWSLS
Trigger: TGAAAGAGACCATGCGGATCATGGGCCTGGACAACA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGGCCCAGGAAGGAGGTaGTCTGGCCCTCATAAAAAT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIGPGRR*SGPHKN
Trigger: ATTTTTATGAGGGCCAGATCACCTCCTTCCTGGGCC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAATTCCAGGGTCGTCTCTaGGATGCCATAACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKFQGRL*DAITRN
Trigger: ATTTCTAGTTATGGCATCTCAGAGACGACCCTGGAA...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAGCCAGGGTCTTTGGTaGGGGCGTTTAAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCSQGLW*GRLRVP
Trigger: TGGAACTCTTAAACGCCCTCACCAAAGACCCTGGCT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACACAAGGACATCCACTaGTGTGGTCATCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIHKDIH*CGHQSH
Trigger: GTGGCTCTGATGACCACATCAGTGGATGTCCTTGTG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCAGTCAACAGCTCTGTaGTGGCATCAAACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCQSTAL*WHQTEG
Trigger: GCCCTCAGTTTGATGCCATCACAGAGCTGTTGACTG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTTGTTGCAACCCCAATaGGAATACACAGGAACAAAA +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLLQPQ*EYTGTK
Trigger: TTTTGTTCCTGTGTATTCTCATTGGGGTTGCAACAA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCATTGTTTAGACTTGTaGCCCTTATACTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFHCLDL*PLYFLG
Trigger: GCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATTCCACTTTTGTGTTTaGGTCTCTTTCTCCTACCCC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGFHFCV*VSFSYP
Trigger: GGGGTAGGAGAAAGAGACGCAAACACAAAAGTGGAA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCTGATTTTGATCCATTaGACAGACTTGTCAAATGTA +
Preference number: 4 (lower is better)
Translates to: HLLCARPHTRLFICVTNNLILIH*TDLSNV
Trigger: TACATTTGACAAGTCTGTGCAATGGATCAAAATCAG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAAGTACTCGCTCTGCTaGAGCCAGTTTCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCKYSLC*SQFLPW
Trigger: CCAAGGGAGAAACTGGCTGCAGCAGAGCGAGTACTT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAAGTACTCGCTCTGCTaGAGCCAGTTTCTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKKYSLC*SQFLPW
Trigger: CCAAGGGAGAAACTGGCTGCAGCAGAGCGAGTACTT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAGATATGGTCCGGATTaGCTGGTTAGTCTCGTTGAA +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKRYGPD*LVSLVE
Trigger: TTCAACGAGACTAACCAGGCAATCCGGACCATATCT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGGTTCTGCCGGATGGTaGTCATCTCAGAGCGAATGT +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKGSAGW*SSQSEC
Trigger: ACATTCGCTCTGAGATGAGCACCATCCGGCAGAACC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCATCTCCGCCTTCACGTaGTTCTCAGAGAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCISAFT*FSESPF
Trigger: GAAAGGGCTCTCTGAGAAGCACGTGAAGGCGGAGAT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGCAGGTGAAGGGTTCTaGATTGTCCAGTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLAGEGF*IVQFPF
Trigger: GAATGGGAACTGGACAATGCAGAACCCTTCACCTGC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGAACTGCAGGTGTTTTaGTTTGCTGACCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKELQVF*FADPLL
Trigger: CAGGAGCGGGTCAGCAAAGCAAAACACCTGCAGTTC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCAGGGCATCAGCCATTaGCTGGTTTTTCACCATGTC +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLQGISH*LVFHHV
Trigger: GACATGGTGAAAAACCAGGCAATGGCTGATGCCCTG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAGAGCTTGCGTTTGTTaGCTCCACTATAGTTACCAG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKRACVC*LHYSYQ
Trigger: CTGGTAACTATAGTGGAGGCAACAAACGCAAGCTCT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAAGGGTTTATTCATTTCTTTCCAGTAGCTGCACAACGTAATTGCCATCAGCCCTGGTTTGGCAATTCCTaGCTGAATAGGGAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: QGFIHFFPVAAQRNCHQPWFGNS*LNREVK
Trigger: TTTTACTTCCCTATTCAGGCAGGAATTGCCAAACCA...GGGCTGATGGCAATTACGTTGTGCAGCTACTGGAAAGAAATGAATAAACCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATGGAGCTGTTCACATTaGTCAGAAACATCACCTCCT +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGWSCSH*SETSPP
Trigger: AGGAGGTGATGTTTCTGACCAATGTGAACAGCTCCA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACCTGGTAGATTTGGGTaGAGGAGCTGGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKPGRFG*RSWSCS
Trigger: TGAACAGCTCCAGCTCCTCCACCCAAATCTACCAGG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACCTGGTAGATTTGGGTaGAGGAGCTGGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIPGRFG*RSWSCS
Trigger: TGAACAGCTCCAGCTCCTCCACCCAAATCTACCAGG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACATCCTCTGGGTGCTTaGCCAAAAACGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKHPLGA*PKTPRC
Trigger: ACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAGACAAACACCACGCTaGGATCACTGTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKRQTPR*DHCRAA
Trigger: TGCTGCCCTACAGTGATCCCAGCGTGGTGTTTGTCT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAAGACAAACACCACGCTaGGATCACTGTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIRQTPR*DHCRAA
Trigger: TGCTGCCCTACAGTGATCCCAGCGTGGTGTTTGTCT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAATTCCGTACTGGCCTaGAAAGACAGCCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMNSVLA*KDSLNV
Trigger: TACATTGAGGCTGTCTTTCCAGGCCAGTACGGAATT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCAAACCAGTAGGACTTaGTGCAAGGAAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMQTSRT*CKENTR
Trigger: CCTGGTATTTTCCTTGCACCAAGTCCTACTGGTTTG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCGTACTTGCCAAAGGGTaGCACGATCAGGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCVLAKG*HDQAEH
Trigger: GTGTTCAGCCTGATCGTGCCACCCTTTGGCAAGTAC...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTGTCGCTGCTACACTaGCATGCAGGTGAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCLSLLH*HAGEGF
Trigger: GAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATTGTCGCTGCTACACTaGCATGCAGGTGAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLSLLH*HAGEGF
Trigger: GAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGCACAGGCAGATTGGTaGAGGACACATAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLAQADW*RTHRTS
Trigger: AGAAGTCCTATGTGTCCTCCACCAATCTGCCTGTGC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGCTTCAGGTCCGGGTTaGACCCTGCTATTCGTACAA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKASGPG*TLLFVQ
Trigger: TTGTACGAATAGCAGGGTCCAACCCGGACCTGAAGC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTCCCACATCAACTTCTaGCTCTTTTCTCCACAACAC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSHINF*LFSPQH
Trigger: GTGTTGTGGAGAAAAGAGCCAGAAGTTGATGTGGGA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGCAGCCCCAGCAGTTTaGCTGTTGATTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKAAPAV*LLILCL
Trigger: GAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACCAGTATTGTTACAGTaGGCTCCTACAACCACAAGA +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKPVLLQ*APTTTR
Trigger: TCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCTCCATGCAGATTTCTaGTATTCTCTTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMLHADF*YSLLVG
Trigger: TCCAACCAGAAGAGAATATCAGAAATCTGCATGGAG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCTCTGCATTCCACCTaGCAGCTGGCTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISLHST*QLACFA
Trigger: AGCAAAACAAGCCAGCTGTCAGGTGGAATGCAGAGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATCTCTGCATTCCACCTaGCAGCTGGCTTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSLHST*QLACFA
Trigger: AGCAAAACAAGCCAGCTGTCAGGTGGAATGCAGAGA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATCAGCTTATTGTCGGTaGACAGCTCCAGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSAYCR*TAPAQR
Trigger: CCTTTGTGCTGGAGCTGTTCACCGACAATAAGCTGA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTCTTCGTCAACTCCTTaGTTTCTAAGATGTCATTCT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSSSTP*FLRCHS
Trigger: AGAATGACATCTTAGAAATCAAGGAGTTGACGAAGA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGCATGGCTTAGTGAATaGGGATGTGCATTACCTTTT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMAWLSE*GCALPF
Trigger: AAAAGGTAATGCACATCCTCATTCACTAAGCCATGC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTTTAAAATATGGCCTTaGAATCAGAGGAACCGAAGT +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFFKIWP*NQRNRS
Trigger: ACTTCGGTTCCTCTGATTTCAAGGCCATATTTTAAA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAGAGTCCCAAGACTATaGAGCAATGTTTTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMRVPRL*SNVFVA
Trigger: AGCCACAAAAACATTGCTGCATAGTCTTGGGACTCT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGGTCTCTTTCAGCCGTaGCTCCTTCTCATACACGAT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIGLFQP*LLLIHD
Trigger: ATCGTGTATGAGAAGGAGGCACGGCTGAAAGAGACC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCTCATAAAAATTCAGTaGCAGGCCATCGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLLIKIQ*QAIDSH
Trigger: GTGGCTGTCGATGGCCTGGCACTGAATTTTTATGAG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCTTTTGGCTATGATCTaGACATACGTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMLLAMI*TYVFTR
Trigger: TCTGGTGAAGACGTATGTGCAGATCATAGCCAAAAG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGTTGAGAAATCGATCTaGAGAACTGTCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLVEKSI*RTVLGQ
Trigger: CTGGCCAAGGACAGTTCTGCAGATCGATTTCTCAAC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCAGGGCATCAGCCATTaGCTGGTTTTTCACCATGTC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCQGISH*LVFHHV
Trigger: GACATGGTGAAAAACCAGGCAATGGCTGATGCCCTG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAAAAGATGTGAGAACTaGAACGTCCACTACTGTCTG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMKRCEN*NVHYCL
Trigger: CAGACAGTAGTGGACGTTGCAGTTCTCACATCTTTT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACAACACTTCACATGGTaGAAAGGAAAGTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKQHFTW*KGKSSS
Trigger: GGAACTAGACTTTCCTTTGCACCATGTGAAGTGTTG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACAACACTTCACATGGTaGAAAGGAAAGTCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGQHFTW*KGKSSS
Trigger: GGAACTAGACTTTCCTTTGCACCATGTGAAGTGTTG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCATGACACACCATGGTaGTTCAAACTTTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFHDTPW*FKLSEK
Trigger: TTTTTCAGAAAGTTTGAAGCACCATGGTGTGTCATG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACACCCACATTTTTGTTaGATGTTACTGCCACCAGAA +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKHPHFC*MLLPPE
Trigger: TTCTGGTGGCAGTAACATGCAACAAAAATGTGGGTG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTATCTCTTTAATCCCATaGCCTGGCTTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLISLIP*PGFSSL
Trigger: CAAGCTGCTGAAGCCAGGGCATGGGATTAAAGAGAT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTTGGGTGGAGGAGCTaGAGCTGTTCACATTGGTCA +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCFGWRS*SCSHWS
Trigger: TGACCAATGTGAACAGCTCCAGCTCCTCCACCCAAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAACGCCACGATGTCTTaGGCTGTCCAATCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKNATMS*AVQSKP
Trigger: TGGCTTAGATTGGACAGCCCAAGACATCGTGGCGTT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCTGATATTCTCTTCTaGTTGGAACCAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSDILF*LEPGWL
Trigger: GAGCCACCCTGGTTCCAACCAGAAGAGAATATCAGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTATGAAGAATCTGTACTaGATCAGAACAGTAATGAGG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFMKNLY*IRTVMR
Trigger: CCTCATTACTGTTCTGATCCAGTACAGATTCTTCAT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTAACAATGAATTGTGCTaGGCATTTATGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFNNELC*AFMYRG
Trigger: CCCTCTATACATAAATGCCCAGCACAATTCATTGTT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TGGTTTGGCAATTCCTGCCTGAATAGGGAAGTAAAATTAAGTGAAGTTGTATTCTTTATTTTAACCAGCTaGCCCATGACGCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: WFGNSCLNREVKLSEVVFFILTS*PMTPGC
Trigger: GCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAA...GAATACAACTTCACTTAATTTTACTTCCCTATTCAGGCAGGAATTGCCAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAACTTCCAGCAGCAGCTaGCATGTTTGTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAITSSSS*HVCLLL
Trigger: CAGAAGAAGACAAACATGTCAGCTGCTGCTGGAAGT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATTGAGCTGGATTTCTTaGTCTGCTGTAATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGLSWIS*SAVMFS
Trigger: TGAGAACATTACAGCAGATCAAGAAATCCAGCTCAA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCCCAGTACCCATCCTTaGTTTTATTTGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLPSTHP*FYLSSP
Trigger: TGGAGAGGACAAATAAAATCAAGGATGGGTACTGGG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGCATCAGAACTGCTCTaGGAAACACTGTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIASELL*ETLSSF
Trigger: AAAGGAGGACAGTGTTTCTCAGAGCAGTTCTGATGC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCAGGAGCATCATTGCTaGCAAATGTGTACTGTTCGT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLQEHHC*QMCTVR
Trigger: ACGAACAGTACACATTTGTCAGCAATGATGCTCCTG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGGCACTAGTCATGACTaGTATGCAAACTTACATAAG +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMGTSHD*YANLHK
Trigger: CTTATGTAAGTTTGCATATCAGTCATGACTAGTGCC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCATTGTTTAGACTTGTaGCCCTTATACTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMHCLDL*PLYFLG
Trigger: GCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TGGTTTGGCAATTCCTGCCTGAATAGGGAAGTAAAATTAAGTGAAGTTGTATTCTTCCACTTTTGTGTTTaGGTCTCTTTCTCCTACCCC +
Preference number: 4 (lower is better)
Translates to: WFGNSCLNREVKLSEVVFFHFCV*VSFSYP
Trigger: GGGGTAGGAGAAAGAGACGCAAACACAAAAGTGGAA...GAATACAACTTCACTTAATTTTACTTCCCTATTCAGGCAGGAATTGCCAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR GCA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCTGATTTTGATCCATTaGACAGACTTGTCAAATGTA +
Preference number: 4 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLILIH*TDLSNV
Trigger: TACATTTGACAAGTCTGTGCAATGGATCAAAATCAG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCTAAGCCATCCAACTaGTGTTCCCAAAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSKPSN*CSQKWS
Trigger: TGACCACTTTTGGGAACAGCAGTTGGATGGCTTAGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCAGGTATGACACAGTaGTACTACTGTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSGMTQ*YYCFCR
Trigger: CCTGCAGAAACAGTAGTAGCACTGTGTCATACCTGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCCATTGACCATGATTaGCATCCTAGTGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSIDHD*HPSAKS
Trigger: GCTCTTTGCACTAGGATGGCAATCATGGTCAATGGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTTCCTGCAGAGGGCATaGCTTTATTTGGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLFLQRA*LYLENG
Trigger: GCCATTTTCCAAATAAAGCCATGCCCTCTGCAGGAA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCAGGATGTCCATGTTaGAACGAAGTACTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISGCPC*NEVLAL
Trigger: CAGAGCGAGTACTTCGTTCCAACATGGACATCCTGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCACACAGAACCATTACTaGACTGGACATCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCTQNHY*TGHPLG
Trigger: ACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAATGGTCCGGATTGCCTaGTTAGTCTCGTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIMVRIA*LVSLKA
Trigger: AGCTTTCAACGAGACTAACCAGGCAATCCGGACCAT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCAGCTCAATGCTGCCTaGAGTAATTCCAGTGAACAC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCQLNAA*SNSSEH
Trigger: GTGTTCACTGGAATTACTCCAGGCAGCATTGAGCTG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTATATTCTCTTCTGGTTaGAACCAGGGTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLIFSSG*NQGGSS
Trigger: AGAAGAGCCACCCTGGTTCCAACCAGAAGAGAATAT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCTGATATTCTCTTCTaGTTGGAACCAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISDILF*LEPGWL
Trigger: GAGCCACCCTGGTTCCAACCAGAAGAGAATATCAGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAAAATAGTGGGGCAGTaGCCATACTCCTCTATACCA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLKIVGQ*PYSSIP
Trigger: TGGTATAGAGGAGTATGGCCACTGCCCCACTATTTT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCCAGTATTGTTACAGTaGGCTCCTACAACCACAAGA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLPVLLQ*APTTTR
Trigger: TCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCTCCATGCAGATTTCTaGTATTCTCTTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLLHADF*YSLLVG
Trigger: TCCAACCAGAAGAGAATATCAGAAATCTGCATGGAG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAATTCCACATCTTTCTTaGCCAAGGTCAGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIIPHLS*PRSGSS
Trigger: GCTACTACCTGACCTTGGTCAAGAAAGATGTGGAAT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAATCTTCCCAAGCTGTTaGGAAATCGATCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKIFPSC*EIDLQN
Trigger: GTTCTGCAGATCGATTTCTCAACAGCTTGGGAAGAT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCATTCTTCCATACTATaGGATGTAAGCACTACTGAT +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMHSSIL*DVSTTD
Trigger: ATCAGTAGTGCTTACATCTCATAGTATGGAAGAATG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAACATTCTTCCATACTATaGGATGTAAGCACTACTGAT +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKHSSIL*DVSTTD
Trigger: ATCAGTAGTGCTTACATCTCATAGTATGGAAGAATG...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACCTGTAGAAAAGATGTaGGAACTGCAACGTCCACTA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIPVEKM*ELQRPL
Trigger: TAGTGGACGTTGCAGTTCTCACATCTTTTCTACAGG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATTCAGCCACCCCGTATaGACAGGATTCTTCATACAT +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKFSHPV*TGFFIH
Trigger: ATGTATGAAGAATCCTGTTCATACGGGGTGGCTGAA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATGTAAACCAGTGAGCTaGATAACATGGCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAICKPVS*ITWHRK
Trigger: CTTCCTGTGCCATGTTATTCAGCTCACTGGTTTACA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAAGCTGTTTTCCCTGTTaGAGAATTCATTGTTTAGAC +
Preference number: 4 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSCFPC*RIHCLD
Trigger: GTCTAAACAATGAATTCTTCAACAGGGAAAACAGCT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGTAAAGTGCTTGGAATaGGGGCCAATGATGAACAAA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLVKCLE*GPMMNK
Trigger: TTTGTTCATCATTGGCCCTCATTCCAAGCACTTTAC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATTCCACTTTTGTGTTTaGGTCTCTTTCTCCTACCCC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIFHFCV*VSFSYP
Trigger: GGGGTAGGAGAAAGAGACGCAAACACAAAAGTGGAA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCATGTTCTCAGAACTTTaGGCATGTCCTTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCMFSEL*ACPSCW
Trigger: CCAGCATGAAGGACATGCGCAAAGTTCTGAGAACAT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCTAAGCCATCCAACTaGTGTTCCCAAAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISKPSN*CSQKWS
Trigger: TGACCACTTTTGGGAACAGCAGTTGGATGGCTTAGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCAGGTATGACACAGTaGTACTACTGTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISGMTQ*YYCFCR
Trigger: CCTGCAGAAACAGTAGTAGCACTGTGTCATACCTGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTGACTCGGAGGAAGTaGTTGAGTATTACTGACACC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCLTRRK*LSITDT
Trigger: GGTGTCAGTAATACTCAAGCACTTCCTCCGAGTCAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATTGACTCGGAGGAAGTaGTTGAGTATTACTGACACC +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLTRRK*LSITDT
Trigger: GGTGTCAGTAATACTCAAGCACTTCCTCCGAGTCAA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCCATTGACCATGATTaGCATCCTAGTGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISIDHD*HPSAKS
Trigger: GCTCTTTGCACTAGGATGGCAATCATGGTCAATGGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAAGGCTACAAAGGCACTaGCCCTGTAATGGAATTTTG +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIRLQRH*PCNGIL
Trigger: CAAAATTCCATTACAGGGGCAGTGCCTTTGTAGCCT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAACAAGGTCCATTTCTTaGCTGTTCTCCATGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAITRSIS*LFSMKV
Trigger: GACCTTCATGGAGAACAGCCAAGAAATGGACCTTGT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAATTCCGTACTGGCCTaGAAAGACAGCCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCNSVLA*KDSLNV
Trigger: TACATTGAGGCTGTCTTTCCAGGCCAGTACGGAATT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTGGTCATCATCACTTTaGTCCTTGGCAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLWSSSL*SLAKFT
Trigger: TGTGAACTTTGCCAAGGACCAAAGTGATGATGACCA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGAGAGGTCTTTTAAGTaGTCATCATCACTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLERSFK*SSSLWS
Trigger: GGACCAAAGTGATGATGACCACTTAAAAGACCTCTC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCCACAACACTTCACATaGTGCAAAGGAAAGTCTAGT +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLPQHFT*CKGKSS
Trigger: ACTAGACTTTCCTTTGCACCATGTGAAGTGTTGTGG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCCCACATCAACTTCTaGCTCTTTTCTCCACAACAC +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAISHINF*LFSPQH
Trigger: GTGTTGTGGAGAAAAGAGCCAGAAGTTGATGTGGGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGAGCATGACACACCATaGTGCTTCAAACTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLEHDTP*CFKLSE
Trigger: TTCAGAAAGTTTGAAGCACCATGGTGTGTCATGCTC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAAAATAGTGGGGCAGTaGCCATACTCCTCTATACCA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKKIVGQ*PYSSIP
Trigger: TGGTATAGAGGAGTATGGCCACTGCCCCACTATTTT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGTAAAGTGCTTGGAATaGGGGCCAATGATGAACAAA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKVKCLE*GPMMNK
Trigger: TTTGTTCATCATTGGCCCTCATTCCAAGCACTTTAC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACTTTTGGCTATGATCTaGACATACGTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAILLAMI*TYVFTR
Trigger: TCTGGTGAAGACGTATGTGCAGATCATAGCCAAAAG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAAAGAGCTGATTGCATaGCAGCCCTTGTTATTGAAC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCKELIA*QPLLLN
Trigger: GTTCAATAACAAGGGCTGGCATGCAATCAGCTCTTT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTTTGTTGCATGTTACTaGCACCAGAACAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLFVACY*HQNSLS
Trigger: TGATAAGCTGTTCTGGTGGCAGTAACATGCAACAAA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTGGCTGTTGATTCTTTaGCTCTTACCAGGATCTAAG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCWLLIL*LLPGSK
Trigger: CTTAGATCCTGGTAAGAGGCAAAGAATCAACAGCCA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAATGTAAAATGCAACGATaGCATATCACTAGTTATTGG +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKCKMQR*HITSYW
Trigger: CCAATAACTAGTGATATGGCATCGTTGCATTTTACA...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTCTCAGATATTCCAGTaGAAAAATAGATCCCATTAC +
Preference number: 4 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSQIFQ*KNRSHY
Trigger: GTAATGGGATCTATTTTTGCACTGGAATATCTGAGA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAATCTCAGATATTCCAGTaGAAAAATAGATCCCATTAC +
Preference number: 4 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKSQIFQ*KNRSHY
Trigger: GTAATGGGATCTATTTTTGCACTGGAATATCTGAGA...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTGCAAAAATACCTTGTaGAGAATGACATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCCKNTL*RMTSAL
Trigger: GAGGGCTGATGTCATTCTCCACAAGGTATTTTTGCA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAAGACTTCTGTTGCTATaGGTTCTAGCTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIRLLLL*VLACSG
Trigger: ACCTGAACAAGCTAGAACCCATAGCAACAGAAGTCT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATCCGCTTCATCCATGTaGTGTGTAGAGAGAATAATG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSASSM*CVERIM
Trigger: CATTATTCTCTCTACACACCACATGGATGAAGCGGA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAACGTCCACTACTGTCTaGTTTTTGTGTAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAITSTTV*FLCNER
Trigger: CCTCTCATTACACAAAAACCAGACAGTAGTGGACGT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGAGCATGACACACCATaGTGCTTCAAACTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIEHDTP*CFKLSE
Trigger: TTCAGAAAGTTTGAAGCACCATGGTGTGTCATGCTC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTGAGCTGGATTTCTTaGTCTGCTGTAATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCLSWIS*SAVMFS
Trigger: TGAGAACATTACAGCAGATCAAGAAATCCAGCTCAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATTGAAGCTTCAAGTTTaGGCTGGATTTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLKLQV*AGFLDL
Trigger: CAGATCAAGAAATCCAGCTCAAACTTGAAGCTTCAA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATTAAGCTTTTGGCTATaGTCTGCACATACGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLSFWL*SAHTSS
Trigger: TGAAGACGTATGTGCAGATCATAGCCAAAAGCTTAA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATTGTTGCAACCCCAATaGGAATACACAGGAACAAAA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLLQPQ*EYTGTK
Trigger: TTTTGTTCCTGTGTATTCTCATTGGGGTTGCAACAA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCAGGGACAACGTAATTaGACATATCCCAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCQGQRN*TYPRQN
Trigger: ATTTTGTCTGGGATATGTGCAATTACGTTGTCCCTG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATTTGTTGCATGTTACTaGCACCAGAACAGCTTATCA +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKFVACY*HQNSLS
Trigger: TGATAAGCTGTTCTGGTGGCAGTAACATGCAACAAA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGGGCATGGCTTTATTTaGAAAATGGCATTCATGTTG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKGHGFI*KMAFML
Trigger: CAACATGAATGCCATTTTCCAAATAAAGCCATGCCC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATGTCTCTCTGGATTCTaGGTCTATGTCAGAATCATT +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAICLSGF*VYVRII
Trigger: AATGATTCTGACATAGACCCAGAATCCAGAGAGACA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAACAATGAATTGTGCTaGGCATTTATGTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLNNELC*AFMYRG
Trigger: CCCTCTATACATAAATGCCCAGCACAATTCATTGTT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR TCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAGCTGTTTTCCCTGTTaGAGAATTCATTGTTTAGAC +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCSCFPC*RIHCLD
Trigger: GTCTAAACAATGAATTCTTCAACAGGGAAAACAGCT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGGGGTATCCAATATCTaGAAAGCCAATTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKGVSNI*KANYLK
Trigger: CTTCAAATAATTGGCTTTGCAGATATTGGATACCCC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCGGGGTATCCAATATCTaGAAAGCCAATTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCGVSNI*KANYLK
Trigger: CTTCAAATAATTGGCTTTGCAGATATTGGATACCCC...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTGTAAAATGCAACGATaGCATATCACTAGTTATTGG +
Preference number: 4 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLCKMQR*HITSYW
Trigger: CCAATAACTAGTGATATGGCATCGTTGCATTTTACA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CCA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAATGAAGAATCTGTACTaGATCAGAACAGTAATGAGG +
Preference number: 4 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKMKNLY*IRTVMR
Trigger: CCTCATTACTGTTCTGATCCAGTACAGATTCTTCAT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACTGATTTTGATCCATTaGACAGACTTGTCAAATGTA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAILILIH*TDLSNV
Trigger: TACATTTGACAAGTCTGTGCAATGGATCAAAATCAG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR GCA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGAAGATACTGTAAAATaGAACGATGCCATATCACTA +
Preference number: 4 (lower is better)
Translates to: NGVSNICKANYLKVLNAIEDTVK*NDAISL
Trigger: TAGTGATATGGCATCGTTGCATTTTACAGTATCTTC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp CCTGAGAACCGGCTCTGTTGGTGCGCGGAGCTCCCCGCCCTGCCCTaGCGCAGCCCGGGAGAGAAGGGTCGGCTCGGCTCTGCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: PENRLCWCAELPALP*RSPGEKGRLGSAGP
Trigger: GGGACCCGCAGAGCCGAGCCGACCCTTCTCTCCCGGGCTGCGGCAGGGCAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCTCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS GCA 90 bp AGCGCCCTGAGAACCGGCTCTGTTGGTGCGCGGAGCTCCCCGCCCTaGCCTGCCGCAGCCCGGGAGAGAAGGGTCGGCTCGGCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: SALRTGSVGARSSPP*PAAARERRVGSALR
Trigger: CCGCAGAGCCGAGCCGACCCTTCTCTCCCGGGCTGCGGCAGGGCAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCTCAGGGCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 90 bp CCATGTTCCCTCAGCCAGCACCCCCAGCGTGTGGCTCGGGAGCCCTaGAAGGCAGCGGCCAGAGCTCACAGCAGGGACGCCGTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: PCSLSQHPQRVAREP*KAAARAHSRDAVAG
Trigger: ACCAGCCACGGCGTCCCTGCTGTGAGCTCTGGCCGCTGCCTTCCAGGGCTCCCGAGCCACACGCTGGGGGTGCTGGCTGAGGGAACATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 90 bp CTGAGGCCAACAAGCCATGTTCCCTCAGCCAGCACCCCCAGCGTGTaGCTCGGGAGCCCTGGAAGGCAGCGGCCAGAGCTCACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LRPTSHVPSASTPSV*LGSPGRQRPELTAG
Trigger: CCCTGCTGTGAGCTCTGGCCGCTGCCTTCCAGGGCTCCCGAGCCACACGCTGGGGGTGCTGGCTGAGGGAACATGGCTTGTTGGCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 90 bp TGTCCAGTTCCCATTCTGGAAGAGGTCCATGATGGTCTGGGGAACTaGGGCAGTGGTCCACTCTTCCTCCCCTGCCTGGCAGGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: CPVPILEEVHDGLGN*GSGPLFLPCLAGRV
Trigger: GACACGCCCTGCCAGGCAGGGGAGGAAGAGTGGACCACTGCCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGAATGGGAACTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp TTCTGCATTGTCCAGTTCCCATTCTGGAAGAGGTCCATGATGGTCTaGGGAACTGGGGCAGTGGTCCACTCTTCCTCCCCTGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: FCIVQFPFWKRSMMV*GTGAVVHSSSPAWQ
Trigger: CTGCCAGGCAGGGGAGGAAGAGTGGACCACTGCCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGAATGGGAACTGGACAATGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 90 bp TTGGGTTTCCTTCCATACAGCGGGTCCCGAAGCCAGGGTCTTTGGTaGGGGCGTTTAAGAGTTCCAGGGTTCCCGTGTCCTCAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: LGFLPYSGSRSQGLW*GRLRVPGFPCPQEH
Trigger: ATGCTCCTGAGGACACGGGAACCCTGGAACTCTTAAACGCCCTCACCAAAGACCCTGGCTTCGGGACCCGCTGTATGGAAGGAAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp CACTGGCATGCAGGTGAAGGGTTCTGCATTGTCCAGTTCCCATTCTaGAAGAGGTCCATGATGGTCTGGGGAACTGGGGCAGTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: HWHAGEGFCIVQFPF*KRSMMVWGTGAVVH
Trigger: GTGGACCACTGCCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGAATGGGAACTGGACAATGCAGAACCCTTCACCTGCATGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp TTTGGATCAGCAGCATCATCTTCAGTGAACGGGCGAAGACAGCTCTaGTTGTCCCCGAAGGCCCGCCTGTTTCGTCTTGCTGGCAAGGTA +
Preference number: 5 (lower is better)
Translates to: FGSAASSSVNGRRQL*LSPKARLFRLAGKV
Trigger: TACCTTGCCAGCAAGACGAAACAGGCGGGCCTTCGGGGACAAGCAGAGCTGTCTTCGCCCGTTCACTGAAGATGATGCTGCTGATCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp CAGCTTCTCATGCTGAACAGCTCCTGGGCCAGAGTCCCAAGACTATaGAGCAATGTTTTTGTGGCTTCAGCCAGCTCCTTGCTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: QLLMLNSSWARVPRL*SNVFVASASSLLGK
Trigger: CTTCCCGAGCAAGGAGCTGGCTGAAGCCACAAAAACATTGCTGCATAGTCTTGGGACTCTGGCCCAGGAGCTGTTCAGCATGAGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp CGGGATGCCCGCAGACAATACGAGACACAGCCTGGTAGATTTGGGTaGAGGAGCTGGAGCTGTTCACATTGGTCAGAAACATCACCTCCT +
Preference number: 5 (lower is better)
Translates to: RDARRQYETQPGRFG*RSWSCSHWSETSPP
Trigger: AGGAGGTGATGTTTCTGACCAATGTGAACAGCTCCAGCTCCTCCACCCAAATCTACCAGGCTGTGTCTCGTATTGTCTGCGGGCATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp TTCCTGGAAGGTCTTGTTCACCTCAGCCATGACCTGCCTTGTGGCTaGAGTGTCAGGTGTATACAGGATCTTCCCAACGAGCAGCGGCTT +
Preference number: 5 (lower is better)
Translates to: FLEGLVHLSHDLPCG*SVRCIQDLPNEQRL
Trigger: AAGCCGCTGCTCGTTGGGAAGATCCTGTATACACCTGACACTCCAGCCACAAGGCAGGTCATGGCTGAGGTGAACAAGACCTTCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp CAGCCACCTTCATCCCATCTCGGTAGACTTTTACCAGGTTCTGAATaGACACGCCCAGCTTCAAGTGGGTGGGTTCCTCCTCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: QPPSSHLGRLLPGSE*TRPASSGWVPPPCR
Trigger: TCTGCATGGAGGAGGAACCCACCCACTTGAAGCTGGGCGTGTCCATTCAGAACCTGGTAAAAGTCTACCGAGATGGGATGAAGGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTTTGGCAATTCCTGCCTCAGCCCTCAGCATCTaGTCCACAGTAGACTTTGGG +
Preference number: 5 (lower is better)
Translates to: AHDARLHIPLLDGLAIPASALSI*STVDFG
Trigger: CCCAAAGTCTACTGTGGACAAGATGCTGAGGGCTGA...GGCAGGAATTGCCAAACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCGAAGACAGCTCTGCTaGTCCCCGAAGGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQRRQLC*SPKARL
Trigger: CAGGCGGGCCTTCGGGGACAAGCAGAGCTGTCTTCG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGCTGTGCTGGGGATCTaGAACACAAAGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPAVLGI*NTKEAG
Trigger: CCCAGCCTCCTTTGTGTTCAAGATCCCCAGCACAGC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 90 bp GAAGTTCCAGGCTGGGGTACTTGCCAAAGGGTGGCACGATCAGGCTaGACACAAGGGCAATGCAGACAAACACAGCTGGCAAGACAATCT +
Preference number: 5 (lower is better)
Translates to: EVPGWGTCQRVARSG*TQGQCRQTQLARQS
Trigger: AGATTGTCTTGCCAGCTGTGTTTGTCTGCATTGCCCTTGTGTTCAGCCTGATCGTGCCACCCTTTGGCAAGTACCCCAGCCTGGAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp TCAGCGTGTCACTCTCATGGTCGCTGCCCAGGCCAGCATCAGAACTaGTCTGAGAAACACTGTCCTCCTTTTTCAGGTATGACACAGTGC +
Preference number: 5 (lower is better)
Translates to: SACHSHGRCPGQHQN*SEKHCPPFSGMTQC
Trigger: GCACTGTGTCATACCTGAAAAAGGAGGACAGTGTTTCTCAGAGCAGTTCTGATGCTGGCCTGGGCAGCGACCATGAGAGTGACACGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS CCA 90 bp GACTGGACATCCTCTGGGTGCTTGGCCAAAAACGCCACGATGTCTTaGGCTGTCCAATCTAAGCCATCCAACTGCTGTTCCCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: DWTSSGCLAKNATMS*AVQSKPSNCCSQKW
Trigger: CCACTTTTGGGAACAGCAGTTGGATGGCTTAGATTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp GGGGGACACACAGGCAGCATCTTCTTGATTTTGTCGCTGCTACACTaGCATGCAGGTGAAGGGTTCTGCATTGTCCAGTTCCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: GGHTGSIFLILSLLH*HAGEGFCIVQFPFW
Trigger: CCAGAATGGGAACTGGACAATGCAGAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTGTGTGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAACATCCTCTGGGTGCTaGGCCAAAAACGCCACGATG +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPTSSGC*AKNATM
Trigger: CATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp CTCCAGGTGTACACAGAACCATTACTGGACTGGACATCCTCTGGGTaGTTGGCCAAAAACGCCACGATGTCTTGGGCTGTCCAATCTAAG +
Preference number: 5 (lower is better)
Translates to: LQVYTEPLLDWTSSG*LAKNATMSWAVQSK
Trigger: CTTAGATTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTACACCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp TTGCTTTTCAGCTTGCTTGATGGCAAACCAACATCCAGGGCCATCTaGTCCATCTCCGCCTTCACGTGCTTCTCAGAGAGCCCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: LLFSLLDGKPTSRAI*SISAFTCFSESPFK
Trigger: CTTGAAAGGGCTCTCTGAGAAGCACGTGAAGGCGGAGATGGAGCAGATGGCCCTGGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp ACACAGCCTGGTAGATTTGGGTGGAGGAGCTGGAGCTGTTCACATTaGTCAGAAACATCACCTCCTGTCGCATGTCACTCCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TQPGRFGWRSWSCSH*SETSPPVACHSSFS
Trigger: TGAGAAGCTGGAGTGACATGCGACAGGAGGTGATGTTTCTGACCAATGTGAACAGCTCCAGCTCCTCCACCCAAATCTACCAGGCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp TTCTCTCCAGGTGTACACAGAACCATTACTGGACTGGACATCCTCTaGGTGCTTGGCCAAAAACGCCACGATGTCTTGGGCTGTCCAATC +
Preference number: 5 (lower is better)
Translates to: FSPGVHRTITGLDIL*VLGQKRHDVLGCPI
Trigger: GATTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTACACCTGGAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp CTCATGAAAGAGTTCCACAAAGGCTCCCTCCTTAGCAGCTTCATATaGCAGCACATAGGTCAGCTCATGCCCTATGTCTTCCACCAGCCG +
Preference number: 5 (lower is better)
Translates to: LMKEFHKGSLLSSFI*QHIGQLMPYVFHQP
Trigger: CGGCTGGTGGAAGACATAGGGCATGAGCTGACCTATGTGCTGCCATATGAAGCTGCTAAGGAGGGAGCCTTTGTGGAACTCTTTCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTTTGTCTTTCTCCTACCCCTaGACAAGCCTTCCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FNQLAHDARLHIPLLDGLSFSYP*TSLPEK
Trigger: CTTCTCCGGAAGGCTTGTCAAGGGGTAGGAGAAAGA...CAAACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGGACTCTCAAACAGGTaGTCCCACTGCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPGLSNR*SHCTPM
Trigger: CATTGGAGTGCAGTGGGACAACCTGTTTGAGAGTCC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTCCAGGCTGGGGTACTaGCCAAAGGGTGGCACGATC +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSRLGY*PKGGTI
Trigger: GATCGTGCCACCCTTTGGCAAGTACCCCAGCCTGGA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCCTGGCTTCAGCAGCTaGCAGCCCCAGCAGTTTGGC +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFPGFSS*QPQQFG
Trigger: GCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAGG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTGCCCATGACGCCAGGTaGCATATTCCACTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: YFNQLAHDARLHIPLLDGAHDAR*HIPLLD
Trigger: ATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGC...ACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS GCA 90 bp TTGAAGCCATCTTCCTCCACAGGACTCTCAAACAGGTTGTCCCACTaGACTCCAATGCCCTGCTCCTCAAAAAGGGCAAAGTACTCACAG +
Preference number: 5 (lower is better)
Translates to: LKPSSSTGLSNRLSH*TPMPCSSKRAKYSQ
Trigger: CTGTGAGTACTTTGCCCTTTTTGAGGAGCAGGGCATTGGAGTGCAGTGGGACAACCTGTTTGAGAGTCCTGTGGAGGAAGATGGCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS CCA 90 bp TCTTGGGCTGTCCAATCTAAGCCATCCAACTGCTGTTCCCAAAAGTaGTCATTGTCCCTGCTGTCCAACAGCATCCGGACAAGGTCCATT +
Preference number: 5 (lower is better)
Translates to: SWAVQSKPSNCCSQK*SLSLLSNSIRTRSI
Trigger: AATGGACCTTGTCCGGATGCTGTTGGACAGCAGGGACAATGACCACTTTTGGGAACAGCAGTTGGATGGCTTAGATTGGACAGCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp AGGTGTACACAGAACCATTACTGGACTGGACATCCTCTGGGTGCTTaGCCAAAAACGCCACGATGTCTTGGGCTGTCCAATCTAAGCCAT +
Preference number: 5 (lower is better)
Translates to: RCTQNHYWTGHPLGA*PKTPRCLGLSNLSH
Trigger: ATGGCTTAGATTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp TCGTTGAAAGCTTCTCTCCAGGTGTACACAGAACCATTACTGGACTaGACATCCTCTGGGTGCTTGGCCAAAAACGCCACGATGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SLKASLQVYTEPLLD*TSSGCLAKNATMSW
Trigger: CCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTACACCTGGAGAGAAGCTTTCAACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp GGGTGGGTTCCTCCTCCATGCAGATTTCTGATATTCTCTTCTGGTTaGAACCAGGGTGGCTCTTCTCATCACTTTCCTCGCCAAACCAGT +
Preference number: 5 (lower is better)
Translates to: GWVPPPCRFLIFSSG*NQGGSSHHFPRQTS
Trigger: ACTGGTTTGGCGAGGAAAGTGATGAGAAGAGCCACCCTGGTTCCAACCAGAAGAGAATATCAGAAATCTGCATGGAGGAGGAACCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCAGCCAGTTTCTCCCTaGGTAGGCCACAAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNQPVSP*VGHKAQ
Trigger: CTGAGCTTTGTGGCCTACCAAGGGAGAAACTGGCTG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGCTATGGGTTCTAGCTaGTTCAGGTTGACACACTCC +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPAMGSS*FRLTHS
Trigger: GGAGTGTGTCAACCTGAACAAGCTAGAACCCATAGC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAACCGAAGTGGTGAGATaGAAGCCATCTTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPTEVVR*KPSSST
Trigger: TGTGGAGGAAGATGGCTTCAATCTCACCACTTCGGT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACACCTGACAGCTGGCTaGTTTTGCTTTTCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPHLTAG*FCFSAC
Trigger: GCAAGCTGAAAAGCAAAACAAGCCAGCTGTCAGGTG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCCCGCCTGTTTCGTCTaGCTGGCAAGGTACCATCTG +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTPACFV*LARYHL
Trigger: CAGATGGTACCTTGCCAGCAAGACGAAACAGGCGGG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCATCAGAGGAGATAGCTTaGCATTTACAGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPSEEIA*HLQVWA
Trigger: GGCCCAGACCTGTAAATGCAAAGCTATCTCCTCTGA...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAACTGATCTCCCCTCCTaGACAACACTTAGGGCACAA +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPTDLPS*TTLRAQ
Trigger: TTGTGCCCTAAGTGTTGTCAAGGAGGGGAGATCAGT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGGCTTCAGGTCCGGGTaGGACCCTGCTATTCGTACA +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTGFRSG*DPAIRT
Trigger: TGTACGAATAGCAGGGTCCAACCCGGACCTGAAGCC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTGCAGCCCCAGCAGTTaGGCTGTTGATTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRCSPSS*AVDSLP
Trigger: AGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGCTTTGCATCTCCGGTaGCTGCTACTGCTGCACTTC +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNALHLR*LLLLHF
Trigger: GAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS TCA 90 bp AGGCAGCATCTTCTTGATTTTGTCGCTGCTACACTGGCATGCAGGTaGAGGGTTCTGCATTGTCCAGTTCCCATTCTGGAAGAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: RQHLLDFVAATLACR*RVLHCPVPILEEVH
Trigger: ATGGACCTCTTCCAGAATGGGAACTGGACAATGCAGAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp AAAAACGCCACGATGTCTTGGGCTGTCCAATCTAAGCCATCCAACTaGTGTTCCCAAAAGTGGTCATTGTCCCTGCTGTCCAACAGCATC +
Preference number: 5 (lower is better)
Translates to: KNATMSWAVQSKPSN*CSQKWSLSLLSNSI
Trigger: GATGCTGTTGGACAGCAGGGACAATGACCACTTTTGGGAACAGCAGTTGGATGGCTTAGATTGGACAGCCCAAGACATCGTGGCGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp TTCTTGATTTTGTCGCTGCTACACTGGCATGCAGGTGAAGGGTTCTaGATTGTCCAGTTCCCATTCTGGAAGAGGTCCATGATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: FLILSLLHWHAGEGF*IVQFPFWKRSMMVW
Trigger: CCAGACCATCATGGACCTCTTCCAGAATGGGAACTGGACAATGCAGAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAAAATCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp CATCACATGTCACATCCATCAGGATTGGCTTCAGGATGTCCATGTTaGAACGAAGTACTCGCTCTGCTGCAGCCAGTTTCTCCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: HHMSHPSGLASGCPC*NEVLALLQPVSPLV
Trigger: TACCAAGGGAGAAACTGGCTGCAGCAGAGCGAGTACTTCGTTCCAACATGGACATCCTGAAGCCAATCCTGATGGATGTGACATGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCTTTCTCCTACCCCTaGACAAGCCTTCCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSFSYP*TSLPEK
Trigger: CTTCTCCGGAAGGCTTGTCAAGGGGTAGGAGAAAGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCAGCCCTCAGCATCTaGTCCACAGTAGACTTTGGG +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSALSI*STVDFG
Trigger: CCCAAAGTCTACTGTGGACAAGATGCTGAGGGCTGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTCATACACGATGCCCTaGATGATCACAGCCACTGAG +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRSYTMP*MITATE
Trigger: CTCAGTGGCTGTGATCATCAAGGGCATCGTGTATGA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCCCGCCTGTTTCGTCTaGCTGGCAAGGTACCATCTG +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFPACFV*LARYHL
Trigger: CAGATGGTACCTTGCCAGCAAGACGAAACAGGCGGG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAAGGGCCACAAACTGTaGCTGTGTAAGTTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRKGHKL*LCKFPA
Trigger: GGCTGGAAACTTACACAGCAACAGTTTGTGGCCCTT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCCGAAGCCAGGGTCTTaGGTGAGGGCGTTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTPKPGS*VRAFKS
Trigger: ACTCTTAAACGCCCTCACCAAAGACCCTGGCTTCGG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCCATCATGTTGGGCTTaGCATCTCCGGTTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNPSCWA*HLRLLL
Trigger: TAGCAGCAACCGGAGATGCAAAGCCCAACATGATGG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCTCTCCCCATCATGTaGGGCTTTGCATCTCCGGTT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSLPIM*GFASPV
Trigger: AACCGGAGATGCAAAGCCCAACATGATGGGGAGAGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS GCA 90 bp CTTGTTCAGGTTGACACACTCCATGAAGCGAGATATGGTCCGGATTaGCTGGTTAGTCTCGTTGAAAGCTTCTCTCCAGGTGTACACAGA +
Preference number: 5 (lower is better)
Translates to: LVQVDTLHEARYGPD*LVSLVESFSPGVHR
Trigger: TCTGTGTACACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGCAATCCGGACCATATCTCGCTTCATGGAGTGTGTCAACCTGAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp TTCAAATGCAATATTCAAACCCAGACCCAGCTGACCCTCCCACACTaGCATACTTTCCCCATGTTGCCAAAACACTGCTTTCCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: FKCNIQTQTQLTLPH*HTFPMLPKHCFPEH
Trigger: GTGCTCTGGAAAGCAGTGTTTTGGCAACATGGGGAAAGTATGGCAGTGTGGGAGGGTCAGCTGGGTCTGGGTTTGAATATTGCATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CCA 90 bp AATGTTCTCAGAACTTTGCGCATGTCCTTCATGCTGGTGTCTTTCTaGCTGTATAAAAGAAGCCTCCGAGCATCTGAGAACAGGCGAGCC +
Preference number: 5 (lower is better)
Translates to: NVLRTLRMSFMLVSF*LYKRSLRASENRRA
Trigger: GGCTCGCCTGTTCTCAGATGCTCGGAGGCTTCTTTTATACAGCCAGAAAGACACCAGCATGAAGGACATGCGCAAAGTTCTGAGAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 90 bp TTCAGGTTGACACACTCCATGAAGCGAGATATGGTCCGGATTGCCTaGTTAGTCTCGTTGAAAGCTTCTCTCCAGGTGTACACAGAACCA +
Preference number: 5 (lower is better)
Translates to: FRLTHSMKRDMVRIA*LVSLKASLQVYTEP
Trigger: TGGTTCTGTGTACACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGCAATCCGGACCATATCTCGCTTCATGGAGTGTGTCAACCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp CATTCGGATCTTGTACTTGACATGATGGGGCAGCTCAATGCTGCCTaGAGTAATTCCAGTGAACACAATACCAGCCCAGAACTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: HSDLVLDMMGQLNAA*SNSSEHNTSPELPL
Trigger: GAGAGGAAGTTCTGGGCTGGTATTGTGTTCACTGGAATTACTCCAGGCAGCATTGAGCTGCCCCATCATGTCAAGTACAAGATCCGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp AGACTTTTACCAGGTTCTGAATGGACACGCCCAGCTTCAAGTGGGTaGGTTCCTCCTCCATGCAGATTTCTGATATTCTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: RLLPGSEWTRPASSG*VPPPCRFLIFSSGW
Trigger: CCAACCAGAAGAGAATATCAGAAATCTGCATGGAGGAGGAACCCACCCACTTGAAGCTGGGCGTGTCCATTCAGAACCTGGTAAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTCTTTCTCCTACCCCTaGACAAGCCTTCCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSFSYP*TSLPEK
Trigger: CTTCTCCGGAAGGCTTGTCAAGGGGTAGGAGAAAGA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTTTGTTTCCACTTTTGTGTTaGCGTCTCTTTCTCCTACCC +
Preference number: 5 (lower is better)
Translates to: FNQLAHDARLHIPLLDGLFPLLC*RLFLLP
Trigger: GGGTAGGAGAAAGAGACGCAAACACAAAAGTGGAAA...CAAACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCGGAAACAGGGGTTGTaGGCATTACAGATAATCCCC +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNRKQGL*ALQIIP
Trigger: GGGGATTATCTGTAATGCCAACAACCCCTGTTTCCG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp GCCCATGACGCCAGGTTGCATATTCCACTCCTGGATGGTTTGGCAATTCCTGCCTTTGAGCTGGATTTCTaGATCTGCTGTAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: AHDARLHIPLLDGLAIPAFELDF*ICCNVL
Trigger: GAGAACATTACAGCAGATCAAGAAATCCAGCTCAAA...GGCAGGAATTGCCAAACCATCCAGGAGTGGAATATGCAACCTGGCGTCATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTCAGCCAGTTTCTCCCTaGGTAGGCCACAAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFQPVSP*VGHKAQ
Trigger: CTGAGCTTTGTGGCCTACCAAGGGAGAAACTGGCTG...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCAGTTCCTGGAAGGTCTaGTTCACCTCAGCCATGACC +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSSWKV*FTSAMT
Trigger: GGTCATGGCTGAGGTGAACAAGACCTTCCAGGAACT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTCCCAAAAGTGGTCATaGTCCCTGCTGTCCAACAGC +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQSQKWS*SLLSNS
Trigger: GCTGTTGGACAGCAGGGACAATGACCACTTTTGGGA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGACAGCTGGCTTGTTTaGCTTTTCAGCTTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPDSWLV*LFSLLD
Trigger: ATCAAGCAAGCTGAAAAGCAAAACAAGCCAGCTGTC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATCCAGGCTGGGGTACTaGCCAAAGGGTGGCACGATC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSRLGY*PKGGTI
Trigger: GATCGTGCCACCCTTTGGCAAGTACCCCAGCCTGGA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTAGGGTTCTCTCCCTTTaGCAGGTTGGCCCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFRVLSL*QVGPEN
Trigger: ATTCTCCGGGCCAACCTGCAAAAGGGAGAGAACCCT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCTACTGCTGCACTTCTaGGCACAGTTAACTGCCCAT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNLLLHF*AQLTAH
Trigger: ATGGGCAGTTAACTGTGCCAAGAAGTGCAGCAGTAG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS TCA 90 bp CATTTCTTTCCAGTAGCTGCACAACGTAATTGCCATCAGCCCTACTaGGGAAGCTGGAGGCATCAGCTTACCTTGTGGAGAATGACATCA +
Preference number: 5 (lower is better)
Translates to: HFFPVAAQRNCHQPY*GSWRHQLTLWRMTS
Trigger: TGATGTCATTCTCCACAAGGTAAGCTGATGCCTCCAGCTTCCTCAGTAGGGCTGATGGCAATTACGTTGTGCAGCTACTGGAAAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS CCA 90 bp GTACAGAAGCACATATTGAAAGAAGAGTTTCTCTCCCCATCATGTTaGGCTTTGCATCTCCGGTTGCTGCTACTGCTGCACTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: VQKHILKEEFLSPSC*ALHLRLLLLLHFLA
Trigger: TGCCAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAACTCTTCTTTCAATATGTGCTTCTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCCTTGCAAAAATACCTaGTGGAGAATGACATCAGCC +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRPCKNT*WRMTSA
Trigger: GGCTGATGTCATTCTCCACAAGGTATTTTTGCAAGG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAATCCATTGCACAGACTaGTCAAATGTAACTGGTAGC +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPIHCTD*SNVTGS
Trigger: GCTACCAGTTACATTTGACAAGTCTGTGCAATGGAT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTTCAGGATGTCCATGTaGGAACGAAGTACTCGCTCT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNFRMSM*ERSTRS
Trigger: AGAGCGAGTACTTCGTTCCAACATGGACATCCTGAA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCTGGAGCTGTTCACATaGGTCAGAAACATCACCTCC +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLELFT*VRNITS
Trigger: GGAGGTGATGTTTCTGACCAATGTGAACAGCTCCAG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTCCCAAAAGTGGTCATaGTCCCTGCTGTCCAACAGC +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSQKWS*SLLSNS
Trigger: GCTGTTGGACAGCAGGGACAATGACCACTTTTGGGA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGGGGATAGGGCATCTGTaGCATATAGACACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRGIGHL*HIDTSF
Trigger: AAAACTGGTGTCTATATGCAACAGATGCCCTATCCC...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTGCTTTTCAGCTTGCTaGATGGCAAACCAACATCCA +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRCFSAC*MANQHP
Trigger: TGGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGCA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACGAAGACAGCTCTGCTaGTCCCCGAAGGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIRRQLC*SPKARL
Trigger: CAGGCGGGCCTTCGGGGACAAGCAGAGCTGTCTTCG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAGATATCTGCAGTGTTTaGTTTTCTTTGTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPDICSV*FSLWRR
Trigger: CCTCCTCCACAAAGAAAACAAAACACTGCAGATATC...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTCTGCAGAACTGTCCTaGGCCAGCTTTAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSAELS*ASFRCF
Trigger: GAAACACCTAAAGCTGGCCAAGGACAGTTCTGCAGA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGGCTTCAGGTCCGGGTaGGACCCTGCTATTCGTACA +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMGFRSG*DPAIRT
Trigger: TGTACGAATAGCAGGGTCCAACCCGGACCTGAAGCC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTGCAGCCCCAGCAGTTaGGCTGTTGATTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFCSPSS*AVDSLP
Trigger: AGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCACATCCATCAGGATaGGCTTCAGGATGTCCATGT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSHPSG*ASGCPC
Trigger: ACATGGACATCCTGAAGCCAATCCTGATGGATGTGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CCA 90 bp GAAATGCAAGTCCAAAGAAATCCTGGACAGGCTTCAGGTCCGGGTTaGACCCTGCTATTCGTACAACTATTGTATAACCATCTCCAAACC +
Preference number: 5 (lower is better)
Translates to: EMQVQRNPGQASGPG*TLLFVQLLYNHLQT
Trigger: GGTTTGGAGATGGTTATACAATAGTTGTACGAATAGCAGGGTCCAACCCGGACCTGAAGCCTGTCCAGGATTTCTTTGGACTTGCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp TTCTCTTTTAGAACACTTCCAGGAAATGCAAGTCCAAAGAAATCCTaGACAGGCTTCAGGTCCGGGTTGGACCCTGCTATTCGTACAACT +
Preference number: 5 (lower is better)
Translates to: FSFRTLPGNASPKKS*TGFRSGLDPAIRTT
Trigger: AGTTGTACGAATAGCAGGGTCCAACCCGGACCTGAAGCCTGTCCAGGATTTCTTTGGACTTGCATTTCCTGGAAGTGTTCTAAAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCAGCAGCTGACATGTTaGTCTTCTTCTGAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNQQLTC*SSSESE
Trigger: CTCACTTTCAGAAGAAGACAAACATGTCAGCTGCTG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCACGAGCCACAATGGATTaGTTAAAGTTTCCAACAACT +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPRATMD*LKFPTT
Trigger: AGTTGTTGGAAACTTTAACAAATCCATTGTGGCTCG...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAATGTTCTCAGAACTTaGCGCATGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNNVLRT*RMSFML
Trigger: CAGCATGAAGGACATGCGCAAAGTTCTGAGAACATT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCCTTGCAAAAATACCTaGTGGAGAATGACATCAGCC +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNPCKNT*WRMTSA
Trigger: GGCTGATGTCATTCTCCACAAGGTATTTTTGCAAGG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACAGCCAGTTTCTCCCTaGGTAGGCCACAAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGQPVSP*VGHKAQ
Trigger: CTGAGCTTTGTGGCCTACCAAGGGAGAAACTGGCTG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGACATCCTCTGGGTGCTaGGCCAAAAACGCCACGATG +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMTSSGC*AKNATM
Trigger: CATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTCTAGCTTGTTCAGGTaGACACACTCCATGAAGCGA +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQSSLFR*THSMKR
Trigger: TCGCTTCATGGAGTGTGTCAACCTGAACAAGCTAGA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCCGAAGCCAGGGTCTTaGGTGAGGGCGTTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMPKPGS*VRAFKS
Trigger: ACTCTTAAACGCCCTCACCAAAGACCCTGGCTTCGG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAGGGCGTGTCTGGGATaGGGTTTCCTTCCATACAGC +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMRACLG*GFLPYS
Trigger: GCTGTATGGAAGGAAACCCAATCCCAGACACGCCCT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATCTCCCTTTTGCAGGTaGGCCCGGAGAATGGCATTG +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSPFCR*ARRMAL
Trigger: CAATGCCATTCTCCGGGCCAACCTGCAAAAGGGAGA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTGCAGGTGTTTTGCTTaGCTGACCCGCTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMCRCFA*LTRSWI
Trigger: GATCCAGGAGCGGGTCAGCAAAGCAAAACACCTGCA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATGCAGGTGTTTTGCTTaGCTGACCCGCTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGCRCFA*LTRSWI
Trigger: GATCCAGGAGCGGGTCAGCAAAGCAAAACACCTGCA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCACCTGAACCTTCCATaGACCATGATTGCCATCCTA +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQHLNLP*TMIAIL
Trigger: TAGGATGGCAATCATGGTCAATGGAAGGTTCAGGTG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACCTGGCTTCAGCAGCTaGCAGCCCCAGCAGTTTGGC +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKPGFSS*QPQQFG
Trigger: GCCAAACTGCTGGGGCTGCAAGCTGCTGAAGCCAGG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GGGTTTATTCATTTCTTTCCAGTAGCTGCACAACGTAATTGCCATCAGCCCTACAGGCATCAGCTTACCTaGTGGAGAATGACATCAGCC +
Preference number: 5 (lower is better)
Translates to: GFIHFFPVAAQRNCHQPYRHQLT*WRMTSA
Trigger: GGCTGATGTCATTCTCCACAAGGTAAGCTGATGCCT...GTAGGGCTGATGGCAATTACGTTGTGCAGCTACTGGAAAGAAATGAATAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAAACTCACAATACCCTaGGCTGGAAACAGGGAAACA +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNKLTIP*AGNRET
Trigger: TGTTTCCCTGTTTCCAGCCAAGGGTATTGTGAGTTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCATACTTTCCCCATGTaGCCAAAACACTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNHTFPM*PKHCFP
Trigger: TGGAAAGCAGTGTTTTGGCAACATGGGGAAAGTATG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTGCTTCCTGATGAGGTaGGAGATAGCAGAGACATCT +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTCFLMR*EIAETS
Trigger: AGATGTCTCTGCTATCTCCAACCTCATCAGGAAGCA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTCTTTCTCCTACCCCTaGACAAGCCTTCCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSFSYP*TSLPEK
Trigger: CTTCTCCGGAAGGCTTGTCAAGGGGTAGGAGAAAGA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAAAATGGCATTCATGTaGTTCATAGGGTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNKMAFM*FIGWVA
Trigger: AGCTACCCACCCTATGAACAACATGAATGCCATTTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCGAGCCACAATGGATTaGTTAAAGTTTCCAACAACT +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRRATMD*LKFPTT
Trigger: AGTTGTTGGAAACTTTAACAAATCCATTGTGGCTCG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGAATGTTCTCAGAACTTaGCGCATGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: QFYFNQLAHDARLHIPLLNVLRT*RMSFML
Trigger: CAGCATGAAGGACATGCGCAAAGTTCTGAGAACATT...CAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGAATGTTCTCAGAACTTaGCGCATGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQNVLRT*RMSFML
Trigger: CAGCATGAAGGACATGCGCAAAGTTCTGAGAACATT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTCAGCCCTCAGCATCTaGTCCACAGTAGACTTTGGG +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSALSI*STVDFG
Trigger: CCCAAAGTCTACTGTGGACAAGATGCTGAGGGCTGA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATATCCATTGCACAGACTaGTCAAATGTAACTGGTAGC +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNIHCTD*SNVTGS
Trigger: GCTACCAGTTACATTTGACAAGTCTGTGCAATGGAT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAAGCTCAGAAACTTCTaGGTCACCAAGTTGAATCAT +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRKLRNF*VTKLNH
Trigger: ATGATTCAACTTGGTGACCAAGAAGTTTCTGAGCTT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTTCAGGATGTCCATGTaGGAACGAAGTACTCGCTCT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFFRMSM*ERSTRS
Trigger: AGAGCGAGTACTTCGTTCCAACATGGACATCCTGAA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTTAGTGTTCTCAGGATaGGCTTCAGGATGTCCATGT +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLVFSG*ASGCPC
Trigger: ACATGGACATCCTGAAGCCAATCCTGAGAACACTAA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTATGCAGCAATGTTTTaGTGGCTTCAGCCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFYAAMF*WLQPAP
Trigger: AGGAGCTGGCTGAAGCCACAAAAACATTGCTGCATA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTGACAAGGTCCATTTCTaGGCTGTTCTCCATGAAGGT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFDKVHF*AVLHEG
Trigger: ACCTTCATGGAGAACAGCCAAGAAATGGACCTTGTC...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAGCCTGGTTAGTCTCGTaGAAAGCTTCTCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKAWLVS*KASLQV
Trigger: CACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGC...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTAGCTCCATGGACTTGTaGATGAGCCAGACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSSMDL*MSQTSV
Trigger: AACAGAAGTCTGGCTCATCAACAAGTCCATGGAGCT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTCCCAGTACCCATCCTaGATTTTATTTGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQSQYPS*ILFVLS
Trigger: GGAGAGGACAAATAAAATCAAGGATGGGTACTGGGA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCAGCATCTTCTTGATTTaGTCGCTGCTACACTGGCAT +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTSIFLI*SLLHWH
Trigger: ATGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTGCCCGGAGAATGGCATaGTTGATGACATTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFARRMA*LMTFRK
Trigger: TTTCCTGAATGTCATCAACAATGCCATTCTCCGGGC...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGCTGTGCTGGGGATCTaGAACACAAAGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLAVLGI*NTKEAG
Trigger: CCCAGCCTCCTTTGTGTTCAAGATCCCCAGCACAGC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CTTCAGCAGCTTGCAGCCCCAGCAGTTTGGCTGTTGATTCTTTGCCTCTTACCAATCTTCGTCAACTCCTaGATTTCTAAGATGTCATTC +
Preference number: 5 (lower is better)
Translates to: LQQLAAPAVWLLILCLLPIFVNS*ISKMSF
Trigger: GAATGACATCTTAGAAATCAAGGAGTTGACGAAGAT...TGGTAAGAGGCAAAGAATCAACAGCCAAACTGCTGGGGCTGCAAGCTGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGTGTCAGATAAACATCTaGAGATGCAGTGTACCATGT +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRCQINI*RCSVPC
Trigger: ACATGGTACACTGCATCTCAAGATGTTTATCTGACA...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 90 bp AGTAGTCTTCTATGTGGAGTCGCTTTTTGCTCTGGGAGAGGATGCTaGATATCCTGGCCAGAGAAGATAATGAAGATGGAAGCTGGTATT +
Preference number: 5 (lower is better)
Translates to: SSLLCGVAFCSGRGC*ISWPEKIMKMEAGI
Trigger: AATACCAGCTTCCATCTTCATTATCTTCTCTGGCCAGGATATTCAGCATCCTCTCCCAGAGCAAAAAGCGACTCCACATAGAAGACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp GTTGTTGGCATTACAGATAATCCCCTGAACCCAAGGAAGTGTTCCTaGAGAGGGCATGGCTTTATTTGGAAAATGGCATTCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VVGITDNPLNPRKCS*RGHGFIWKMAFMLF
Trigger: GAACAACATGAATGCCATTTTCCAAATAAAGCCATGCCCTCTGCAGGAACACTTCCTTGGGTTCAGGGGATTATCTGTAATGCCAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAACTGTTTTCCACTTTaGTGTTTGCGTCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNNCFPL*CLRLFL
Trigger: GAGAAAGAGACGCAAACACAAAAGTGGAAAACAGTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CAATTTTATTTTAACCAGCTGGCCCATGACGCCAGGTTGCATATTCCACTCCTGAAAATGGCATTCATGTaGTTCATAGGGTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: QFYFNQLAHDARLHIPLLKMAFM*FIGWVA
Trigger: AGCTACCCACCCTATGAACAACATGAATGCCATTTT...CAGGAGTGGAATATGCAACCTGGCGTCATGGGCCAGCTGGTTAAAATAAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CCTGGATGGTTTGGCAATTCCTGCCTGAATAGGGAAGTAAAATTAAGTGAAGTTCGGAAACAGGGGTTGTaGGCATTACAGATAATCCCC +
Preference number: 5 (lower is better)
Translates to: PGWFGNSCLNREVKLSEVRKQGL*ALQIIP
Trigger: GGGGATTATCTGTAATGCCAACAACCCCTGTTTCCG...AACTTCACTTAATTTTACTTCCCTATTCAGGCAGGAATTGCCAAACCATCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACGGAAACAGGGGTTGTaGGCATTACAGATAATCCCC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGRKQGL*ALQIIP
Trigger: GGGGATTATCTGTAATGCCAACAACCCCTGTTTCCG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCGAGCCACAATGGATTaGTTAAAGTTTCCAACAACT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNRATMD*LKFPTT
Trigger: AGTTGTTGGAAACTTTAACAAATCCATTGTGGCTCG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTTTGAGCTGGATTTCTaGATCTGCTGTAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNFELDF*ICCNVL
Trigger: GAGAACATTACAGCAGATCAAGAAATCCAGCTCAAA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCATCTCTTCTGATTTaGATCCATTGCACAGACTTG +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSSLLI*IHCTDL
Trigger: CAAGTCTGTGCAATGGATCAAAATCAGAAGAGATGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATAAGCTCAGAAACTTCTaGGTCACCAAGTTGAATCAT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNKLRNF*VTKLNH
Trigger: ATGATTCAACTTGGTGACCAAGAAGTTTCTGAGCTT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGCTTCAGCCAGCTCCTaGCTCGGGAAGGGAGATGTA +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIASASS*LGKGDV
Trigger: TACATCTCCCTTCCCGAGCAAGGAGCTGGCTGAAGC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTTGTCCTCATACCAGTaGAGAGACTTGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFLSSYQ*RDLIFS
Trigger: GCTGAAGATCAAGTCTCTCAACTGGTATGAGGACAA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAGCAGCTCCATGGACTaGTTGATGAGCCAGACTTCT +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSSSMD*LMSQTS
Trigger: AGAAGTCTGGCTCATCAACAAGTCCATGGAGCTGCT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGGAAGCACTGCAGGATaGTCACCACAGCAAACACGG +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLGSTAG*SPQQTR
Trigger: CCGTGTTTGCTGTGGTGACAATCCTGCAGTGCTTCC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGGTTTTGCTTTTCAGCTaGCTTGATGGCAAACCAACA +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQVLLFS*LDGKPT
Trigger: TGTTGGTTTGCCATCAAGCAAGCTGAAAAGCAAAAC...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAATAATGGTGCGGCCTaGTCGGTATTTCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMNNGAA*SVFQQQ
Trigger: CTGCTGCTGAAATACCGACAAGGCCGCACCATTATT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGACTCTCTTCGGCCACCTaGAGGAATATTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGLSSAT*RNISSR
Trigger: CCTGGAAGAAATATTCCTCAAGGTGGCCGAAGAGAG...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAAGGGCCACAAACTGTaGCTGTGTAAGTTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKKGHKL*LCKFPA
Trigger: GGCTGGAAACTTACACAGCAACAGTTTGTGGCCCTT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAGGGCGTGTCTGGGATaGGGTTTCCTTCCATACAGC +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLRACLG*GFLPYS
Trigger: GCTGTATGGAAGGAAACCCAATCCCAGACACGCCCT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTAGCATCTTCTTGATTTaGTCGCTGCTACACTGGCAT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFSIFLI*SLLHWH
Trigger: ATGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAACTCGGAGGAAGTGCTaGAGTATTACTGACACCCAG +
Preference number: 5 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKTRRKC*SITDTQ
Trigger: CTGGGTGTCAGTAATACTCAAGCACTTCCTCCGAGT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGACTCGGAGGAAGTGCTaGAGTATTACTGACACCCAG +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMTRRKC*SITDTQ
Trigger: CTGGGTGTCAGTAATACTCAAGCACTTCCTCCGAGT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAGGGTTCTCTCCCTTTaGCAGGTTGGCCCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLRVLSL*QVGPEN
Trigger: ATTCTCCGGGCCAACCTGCAAAAGGGAGAGAACCCT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGATATTATTCAGCTTATaGTCGGTGAACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQILFSL*SVNSSS
Trigger: GCTGGAGCTGTTCACCGACAATAAGCTGAATAATAT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATCAGAGGAGATAGCTTaGCATTTACAGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSEEIA*HLQVWA
Trigger: GGCCCAGACCTGTAAATGCAAAGCTATCTCCTCTGA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAATGGCTGTAGAGAGCTaGCGTTTGTTGCCTCCACTA +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGMAVES*RLLPPL
Trigger: TAGTGGAGGCAACAAACGCAAGCTCTCTACAGCCAT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGCTATTCGTACAACTATaGTATAACCATCTCCAAACC +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRLFVQL*YNHLQT
Trigger: GGTTTGGAGATGGTTATACAATAGTTGTACGAATAG...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCAGTGGCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGAAAGTTCACAAATACTaGGTCAAGTGTTGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: AVAILLYTTGFYKEAILRKVHKY*VKCCLR
Trigger: TCTCAGACAACACTTGACCAAGTATTTGTGAACTTT...CCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGCCACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATGTACAGAAGCACATATaGAAAGAAGAGTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNVQKHI*KEEFLS
Trigger: GGAGAGAAACTCTTCTTTCAATATGTGCTTCTGTAC...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATCGTGAAATTCCACTTTaGGTACAGAAGCACATATTG +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNREIPL*VQKHIL
Trigger: CAATATGTGCTTCTGTACCAAAAGTGGAATTTCACG...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGATAGCAGAGACATCTaGAGTCAGCGCCACCAGCCT +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLDSRDI*SQRHQP
Trigger: AGGCTGGTGGCGCTGACTCAAGATGTCTCTGCTATC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678995.1
CDS GCA 90 bp CTTCATTTGTTTGATGGCATCATTAACTTCTTGACTCGGAGGAAGTaGTTGAGTATTACTGACACCCAGGGAAAAGCCGCCATACCTAAA +
Preference number: 5 (lower is better)
Translates to: LHLFDGIINFLTRRK*LSITDTQGKAAIPK
Trigger: TTTAGGTATGGCGGCTTTTCCCTGGGTGTCAGTAATACTCAAGCACTTCCTCCGAGTCAAGAAGTTAATGATGCCATCAAACAAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp AAGTCCAAAGAAATCCTGGACAGGCTTCAGGTCCGGGTTGGACCCTaGTATTCGTACAACTATTGTATAACCATCTCCAAACCTATTTTT +
Preference number: 5 (lower is better)
Translates to: KSKEILDRLQVRVGP*YSYNYCITISKPIF
Trigger: AAAAATAGGTTTGGAGATGGTTATACAATAGTTGTACGAATAGCAGGGTCCAACCCGGACCTGAAGCCTGTCCAGGATTTCTTTGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 90 bp CTGGTTTTTCACCATGTCGATGAGCCCTCGTCCCAGGCAAAAATGTaGGAAGATCAAGAACACGGACTTCAGGATATCATTGATATTATT +
Preference number: 5 (lower is better)
Translates to: LVFHHVDEPSSQAKM*EDQEHGLQDIIDII
Trigger: AATAATATCAATGATATCCTGAAGTCCGTGTTCTTGATCTTCCCACATTTTTGCCTGGGACGAGGGCTCATCGACATGGTGAAAAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGAACTGTTTTCCACTTTaGTGTTTGCGTCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQNCFPL*CLRLFL
Trigger: GAGAAAGAGACGCAAACACAAAAGTGGAAAACAGTT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATTCTGATTTTGATCCATaGCACAGACTTGTCAAATGT +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNSDFDP*HRLVKC
Trigger: ACATTTGACAAGTCTGTGCAATGGATCAAAATCAGA...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCTTCCTCAGTGCCATaGCCTCCAAAGAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSSSVP*PPKRAL
Trigger: CAAAGCCCTCTTTGGAGGCAATGGCACTGAGGAAGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAATGAAGGTCCAGATCTaGGGGCTGAGTTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIMKVQI*GLSSSH
Trigger: GTGGGAGGAACTCAGCCCCAAGATCTGGACCTTCAT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCATGAAGGTCCAGATCTaGGGGCTGAGTTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCMKVQI*GLSSSH
Trigger: GTGGGAGGAACTCAGCCCCAAGATCTGGACCTTCAT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGCCTGGTTAGTCTCGTaGAAAGCTTCTCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLAWLVS*KASLQV
Trigger: CACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTCTAGCTTGTTCAGGTaGACACACTCCATGAAGCGA +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMSSLFR*THSMKR
Trigger: TCGCTTCATGGAGTGTGTCAACCTGAACAAGCTAGA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCGGAAGCACTGCAGGATaGTCACCACAGCAAACACGG +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCGSTAG*SPQQTR
Trigger: CCGTGTTTGCTGTGGTGACAATCCTGCAGTGCTTCC...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGGACTCTCAAACAGGTaGTCCCACTGCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLGLSNR*SHCTPM
Trigger: CATTGGAGTGCAGTGGGACAACCTGTTTGAGAGTCC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCCTATGTCAGAATCATTaGGATCAGCAGCATCATCTT +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTLCQNH*DQQHHL
Trigger: AAGATGATGCTGCTGATCCAAATGATTCTGACATAG...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAACAGGCAGCATCTTCTaGATTTTGTCGCTGCTACAC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGTGSIF*ILSLLH
Trigger: GTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTGT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGGCATCATTAACTTCTaGACTCGGAGGAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMGIINF*TRRKCL
Trigger: CAAGCACTTCCTCCGAGTCAAGAAGTTAATGATGCC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGACCTTGACATTATTTTaGGTGTCCAGTCCTGTCATA +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQTLTLF*VSSPVI
Trigger: TATGACAGGACTGGACACCAAAAATAATGTCAAGGT...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGCCCGGAGAATGGCATaGTTGATGACATTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMARRMA*LMTFRK
Trigger: TTTCCTGAATGTCATCAACAATGCCATTCTCCGGGC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGCTGGCCATGATTACTaGATGAATTATTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTAGHDY*MNYCCN
Trigger: GTTGCAACAATAATTCATCAAGTAATCATGGCCAGC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCGACCCTTATACTTTCTaGGCTTTTGCATTGTTGCAA +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTDPYTF*AFALLQ
Trigger: TTGCAACAATGCAAAAGCCAAGAAAGTATAAGGGTC...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCAAACTACCTCCCTCCCCTTCACCACCATTACAAGGACAAGGGTTTATTCATTCACTGTTTTCCACTTTaGTGTTTGCGTCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SNYLPPLHHHYKDKGLFIHCFPL*CLRLFL
Trigger: GAGAAAGAGACGCAAACACAAAAGTGGAAAACAGTG...AATGAATAAACCCTTGTCCTTGTAATGGTGGTGAAGGGGAGGGAGGTAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CACCTATTGTGTGCCAGGCCCCACACCAGGCTCTTCATATGTGTAACCAATAATATCAACTTCTATTTATaGAGCACCTATTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: HLLCARPHTRLFICVTNNINFYL*STYCVP
Trigger: TGGCACACAATAGGTGCTCAATAAATAGAAGTTGAT...ATTATTGGTTACACATATGAAGAGCCTGGTGTGGGGCCTGGCACACAATAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS TCA 90 bp TCCCTTGGTAGGCCACAAAGCTCAGAAACTTCTTGGTCACCAAGTTaGATCATCTCTTCTGATTTTGATCCATTGCACAGACTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: SLGRPQSSETSWSPS*IISSDFDPLHRLVK
Trigger: TTTGACAAGTCTGTGCAATGGATCAAAATCAGAAGAGATGATTCAACTTGGTGACCAAGAAGTTTCTGAGCTTTGTGGCCTACCAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCGGAAACAGGGGTTGTaGGCATTACAGATAATCCCC +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLRKQGL*ALQIIP
Trigger: GGGGATTATCTGTAATGCCAACAACCCCTGTTTCCG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATCAGCCCTCAGCATCTaGTCCACAGTAGACTTTGGG +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSALSI*STVDFG
Trigger: CCCAAAGTCTACTGTGGACAAGATGCTGAGGGCTGA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGCCTTGCAAAAATACCTaGTGGAGAATGACATCAGCC +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMPCKNT*WRMTSA
Trigger: GGCTGATGTCATTCTCCACAAGGTATTTTTGCAAGG...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCTTCCTCAGTGCCATaGCCTCCAAAGAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAISSSVP*PPKRAL
Trigger: CAAAGCCCTCTTTGGAGGCAATGGCACTGAGGAAGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAGTTCCTGGAAGGTCTaGTTCACCTCAGCCATGACC +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCSSWKV*FTSAMT
Trigger: GGTCATGGCTGAGGTGAACAAGACCTTCCAGGAACT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGGGATAGGGCATCTGTaGCATATAGACACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMGIGHL*HIDTSF
Trigger: AAAACTGGTGTCTATATGCAACAGATGCCCTATCCC...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTACCGAAGTGGTGAGATaGAAGCCATCTTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLTEVVR*KPSSST
Trigger: TGTGGAGGAAGATGGCTTCAATCTCACCACTTCGGT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCTTGTTCTTTAAGCTTTaGGCTATGATCTGCACATAC +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTLFFKL*AMICTY
Trigger: GTATGTGCAGATCATAGCCAAAAGCTTAAAGAACAA...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCTGCAGAACTGTCCTaGGCCAGCTTTAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSAELS*ASFRCF
Trigger: GAAACACCTAAAGCTGGCCAAGGACAGTTCTGCAGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGTTATTGAACCACACCTaGACATTATTTTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLLNHT*TLFLVS
Trigger: GGACACCAAAAATAATGTCAAGGTGTGGTTCAATAA...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGTGCCAGCCCTTGTTATaGAACCACACCTTGACATTA +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMCQPLL*NHTLTL
Trigger: TAATGTCAAGGTGTGGTTCAATAACAAGGGCTGGCA...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GCCATACTCCTCTATACCACAGGGTTCTACAAAGAGGCCATTCTAAGGATTCAGCTATTCGTACAACTATaGTATAACCATCTCCAAACC +
Preference number: 5 (lower is better)
Translates to: AILLYTTGFYKEAILRIQLFVQL*YNHLQT
Trigger: GGTTTGGAGATGGTTATACAATAGTTGTACGAATAG...CTGAATCCTTAGAATGGCCTCTTTGTAGAACCCTGTGGTATAGAGGAGTATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTATACTTGGTCAAGTGTaGTCTGAGAAACAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFILGQV*SEKQSS
Trigger: ACTACTCTGTTTCTCAGACAACACTTGACCAAGTAT...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGGATGTGTCACCAAACCCATATGTCCATaGGGTTCCATAATAGAGTTT +
Preference number: 5 (lower is better)
Translates to: KLGTNNSGTLIASNGCVTKPICP*GSIIEF
Trigger: AAACTCTATTATGGAACCCAATGGACATATGGGTTT...GGTGACACATCCATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAACACCCACATTTTTGTaGCATGTTACTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKTPTFL*HVTATR
Trigger: TCTGGTGGCAGTAACATGCAACAAAAATGTGGGTGT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCTGTAGACCCATGGCTCGAAGCATAGGACAATATAACAATGGAACCAAGTTTTGTCAGATAAACATCTaGAGATGCAGTGTACCATGT +
Preference number: 5 (lower is better)
Translates to: PCRPMARSIGQYNNGTKFCQINI*RCSVPC
Trigger: ACATGGTACACTGCATCTCAAGATGTTTATCTGACA...AAACTTGGTTCCATTGTTATATTGTCCTATGCTTCGAGCCATGGGTCTACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAAAGGCTGCCCAGTATaGTTACAGTGGGCTCCTACA +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLKGCPV*LQWAPT
Trigger: TGTAGGAGCCCACTGTAACAATACTGGGCAGCCTTT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 90 bp GGACTAAATAATTTATCCGACATCAATGCTGGTAAAATATTCAAATaGAATATTCAAACCCAGACCCAGCTGACCCTCCCACACTGCCAT +
Preference number: 5 (lower is better)
Translates to: GLNNLSDINAGKIFK*NIQTQTQLTLPHCH
Trigger: ATGGCAGTGTGGGAGGGTCAGCTGGGTCTGGGTTTGAATATTGCATTTGAATATTTTACCAGCATTGATGTCGGATAAATTATTTAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAATCCATTGCACAGACTaGTCAAATGTAACTGGTAGC +
Preference number: 5 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKIHCTD*SNVTGS
Trigger: GCTACCAGTTACATTTGACAAGTCTGTGCAATGGAT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACTGGAGCTGTTCACATaGGTCAGAAACATCACCTCC +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAILELFT*VRNITS
Trigger: GGAGGTGATGTTTCTGACCAATGTGAACAGCTCCAG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAGCAGCTCCATGGACTaGTTGATGAGCCAGACTTCT +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCSSSMD*LMSQTS
Trigger: AGAAGTCTGGCTCATCAACAAGTCCATGGAGCTGCT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCATACACGATGCCCTaGATGATCACAGCCACTGAG +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAISYTMP*MITATE
Trigger: CTCAGTGGCTGTGATCATCAAGGGCATCGTGTATGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGATATTCTCTTCTGGTaGGAACCAGGGTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKDILFW*EPGWLF
Trigger: GAAGAGCCACCCTGGTTCCAACCAGAAGAGAATATC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAGATATTCTCTTCTGGTaGGAACCAGGGTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIDILFW*EPGWLF
Trigger: GAAGAGCCACCCTGGTTCCAACCAGAAGAGAATATC...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCACCTGACAGCTGGCTaGTTTTGCTTTTCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCHLTAG*FCFSAC
Trigger: GCAAGCTGAAAAGCAAAACAAGCCAGCTGTCAGGTG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAATAATGGTGCGGCCTaGTCGGTATTTCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKNNGAA*SVFQQQ
Trigger: CTGCTGCTGAAATACCGACAAGGCCGCACCATTATT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATGCTTCCTGATGAGGTaGGAGATAGCAGAGACATCG +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKCFLMR*EIAETS
Trigger: CGATGTCTCTGCTATCTCCAACCTCATCAGGAAGCA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACTCTCTTCGGCCACCTaGAGGAATATTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLSSAT*RNISSR
Trigger: CCTGGAAGAAATATTCCTCAAGGTGGCCGAAGAGAG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAATCTTCCCAAGCTGTaGAGAAATCGATCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKNLPKL*RNRSAE
Trigger: TTCTGCAGATCGATTTCTCAACAGCTTGGGAAGATT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAATATTATTCAGCTTATaGTCGGTGAACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGILFSL*SVNSSS
Trigger: GCTGGAGCTGTTCACCGACAATAAGCTGAATAATAT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAATGGCTGTAGAGAGCTaGCGTTTGTTGCCTCCACTA +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKMAVES*RLLPPL
Trigger: TAGTGGAGGCAACAAACGCAAGCTCTCTACAGCCAT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAACTGATCTCCCCTCCTaGACAACACTTAGGGCACAA +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKTDLPS*TTLRAQ
Trigger: TTGTGCCCTAAGTGTTGTCAAGGAGGGGAGATCAGT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAACTCTGGCACACTCATaGCCAGCAATGGATGTGTCA +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKTLAHS*PAMDVS
Trigger: TGACACATCCATTGCTGGCAATGAGTGTGCCAGAGT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAAAGGCTGCCCAGTATaGTTACAGTGGGCTCCTACA +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCKGCPV*LQWAPT
Trigger: TGTAGGAGCCCACTGTAACAATACTGGGCAGCCTTT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCCAGTATTGTTACAGTGGGCTCCTACAACCACAAGACAACCTATATTTGTAAAAACTGTTTTCCACTTTaGTGTTTGCGTCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: PSIVTVGSYNHKTTYICKNCFPL*CLRLFL
Trigger: GAGAAAGAGACGCAAACACAAAAGTGGAAAACAGTT...TTTACAAATATAGGTTGTCTTGTGGTTGTAGGAGCCCACTGTAACAATACTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTCAGCAGCTGACATGTTaGTCTTCTTCTGAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLQQLTC*SSSESE
Trigger: CTCACTTTCAGAAGAAGACAAACATGTCAGCTGCTG...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CCTGGATGGTTTGGCAATTCCTGCCTGAATAGGGAAGTAAAATTAAGTGAAGTTCGAGCCACAATGGATTaGTTAAAGTTTCCAACAACT +
Preference number: 5 (lower is better)
Translates to: PGWFGNSCLNREVKLSEVRATMD*LKFPTT
Trigger: AGTTGTTGGAAACTTTAACAAATCCATTGTGGCTCG...AACTTCACTTAATTTTACTTCCCTATTCAGGCAGGAATTGCCAAACCATCCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATTTGAGCTGGATTTCTaGATCTGCTGTAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGFELDF*ICCNVL
Trigger: GAGAACATTACAGCAGATCAAGAAATCCAGCTCAAA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATCATCTCTTCTGATTTaGATCCATTGCACAGACTTG +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSSLLI*IHCTDL
Trigger: CAAGTCTGTGCAATGGATCAAAATCAGAAGAGATGA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAAAGCTCAGAAACTTCTaGGTCACCAAGTTGAATCAT +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGKLRNF*VTKLNH
Trigger: ATGATTCAACTTGGTGACCAAGAAGTTTCTGAGCTT...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATTCAGGATGTCCATGTaGGAACGAAGTACTCGCTCT +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIFRMSM*ERSTRS
Trigger: AGAGCGAGTACTTCGTTCCAACATGGACATCCTGAA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATATGCAGCAATGTTTTaGTGGCTTCAGCCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKYAAMF*WLQPAP
Trigger: AGGAGCTGGCTGAAGCCACAAAAACATTGCTGCATA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTTGTCCTCATACCAGTaGAGAGACTTGATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLLSSYQ*RDLIFS
Trigger: GCTGAAGATCAAGTCTCTCAACTGGTATGAGGACAA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGACAAGGTCCATTTCTaGGCTGTTCTCCATGAAGGT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKDKVHF*AVLHEG
Trigger: ACCTTCATGGAGAACAGCCAAGAAATGGACCTTGTC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAGCTCCATGGACTTGTaGATGAGCCAGACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSSMDL*MSQTSV
Trigger: AACAGAAGTCTGGCTCATCAACAAGTCCATGGAGCT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAACAGGCAGCATCTTCTaGATTTTGTCGCTGCTACAC +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAITGSIF*ILSLLH
Trigger: GTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTGT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGGCATCATTAACTTCTaGACTCGGAGGAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKGIINF*TRRKCL
Trigger: CAAGCACTTCCTCCGAGTCAAGAAGTTAATGATGCC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACACCTGAACCTTCCATaGACCATGATTGCCATCCTA +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIHLNLP*TMIAIL
Trigger: TAGGATGGCAATCATGGTCAATGGAAGGTTCAGGTG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGCTGGCCATGATTACTaGATGAATTATTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGAGHDY*MNYCCN
Trigger: GTTGCAACAATAATTCATCAAGTAATCATGGCCAGC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGAGACCCTTATACTTTCTaGGCTTTTGCATTGTTGCAA +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGDPYTF*AFALLQ
Trigger: TTGCAACAATGCAAAAGCCAAGAAAGTATAAGGGTC...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATACAGCAGCTGACATGTTaGTCTTCTTCTGAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIQQLTC*SSSESE
Trigger: CTCACTTTCAGAAGAAGACAAACATGTCAGCTGCTG...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAAAATGGCATTCATGTaGTTCATAGGGTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLKMAFM*FIGWVA
Trigger: AGCTACCCACCCTATGAACAACATGAATGCCATTTT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCAATGTTCTCAGAACTTaGCGCATGTCCTTCATGCTG +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCNVLRT*RMSFML
Trigger: CAGCATGAAGGACATGCGCAAAGTTCTGAGAACATT...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp CAGATATTCCAGTGCAAAAATAGATCCCATTACAGACAGCGTAAAGTGCTTGGATCTGATTTTGATCCATaGCACAGACTTGTCAAATGT +
Preference number: 5 (lower is better)
Translates to: QIFQCKNRSHYRQRKVLGSDFDP*HRLVKC
Trigger: ACATTTGACAAGTCTGTGCAATGGATCAAAATCAGA...TCCAAGCACTTTACGCTGTCTGTAATGGGATCTATTTTTGCACTGGAATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATTAGTGTTCTCAGGATaGGCTTCAGGATGTCCATGT +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAILVFSG*ASGCPC
Trigger: ACATGGACATCCTGAAGCCAATCCTGAGAACACTAA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCCCAGTACCCATCCTaGATTTTATTTGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAISQYPS*ILFVLS
Trigger: GGAGAGGACAAATAAAATCAAGGATGGGTACTGGGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATGCTTTTCAGCTTGCTaGATGGCAAACCAACATCCA +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKCFSAC*MANQHP
Trigger: TGGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGCA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTGTTTTGCTTTTCAGCTaGCTTGATGGCAAACCAACA +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLVLLFS*LDGKPT
Trigger: TGTTGGTTTGCCATCAAGCAAGCTGAAAAGCAAAAC...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAGACAGCTGGCTTGTTTaGCTTTTCAGCTTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKDSWLV*LFSLLD
Trigger: ATCAAGCAAGCTGAAAAGCAAAACAAGCCAGCTGTC...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTCCTCAGGAGCATCATaGCTGACAAATGTGTACTGT +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCSSGAS*LTNVYC
Trigger: ACAGTACACATTTGTCAGCAATGATGCTCCTGAGGA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATCCTCAGGAGCATCATaGCTGACAAATGTGTACTGT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSSGAS*LTNVYC
Trigger: ACAGTACACATTTGTCAGCAATGATGCTCCTGAGGA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTAATCTTCCCAAGCTGTaGAGAAATCGATCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLNLPKL*RNRSAE
Trigger: TTCTGCAGATCGATTTCTCAACAGCTTGGGAAGATT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTGCCAGCCCTTGTTATaGAACCACACCTTGACATTA +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCCQPLL*NHTLTL
Trigger: TAATGTCAAGGTGTGGTTCAATAACAAGGGCTGGCA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AACTTTCTGAAAAACTTGGCACTAATAACTCTGGCACACTCATTGCCAGCAATGAACTTTCTGAAAAACTaGGCACTAATAACTCTGGCA +
Preference number: 5 (lower is better)
Translates to: NFLKNLALITLAHSLPAMNFLKN*ALITLA
Trigger: TGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT...CATTGCTGGCAATGAGTGTGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAAAAATGGCATTCATGTaGTTCATAGGGTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIKMAFM*FIGWVA
Trigger: AGCTACCCACCCTATGAACAACATGAATGCCATTTT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTACCTTGACATTATTTTaGGTGTCCAGTCCTGTCATA +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLTLTLF*VSSPVI
Trigger: TATGACAGGACTGGACACCAAAAATAATGTCAAGGT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATTTGAGCTGGATTTCTaGATCTGCTGTAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIFELDF*ICCNVL
Trigger: GAGAACATTACAGCAGATCAAGAAATCCAGCTCAAA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTTCTGATTTTGATCCATaGCACAGACTTGTCAAATGT +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLSDFDP*HRLVKC
Trigger: ACATTTGACAAGTCTGTGCAATGGATCAAAATCAGA...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAACTATGTCAGAATCATTaGGATCAGCAGCATCATCTT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKLCQNH*DQQHHL
Trigger: AAGATGATGCTGCTGATCCAAATGATTCTGACATAG...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTCATTCACCCAGATCTaGTTCTTTAAGCTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCSFTQI*FFKLLA
Trigger: AGCCAAAAGCTTAAAGAACAAGATCTGGGTGAATGA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATCATTCACCCAGATCTaGTTCTTTAAGCTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSFTQI*FFKLLA
Trigger: AGCCAAAAGCTTAAAGAACAAGATCTGGGTGAATGA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAATACTTGGTCAAGTGTaGTCTGAGAAACAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIILGQV*SEKQSS
Trigger: ACTACTCTGTTTCTCAGACAACACTTGACCAAGTAT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAATCATCACTTTGGTCCTaGGCAAAGTTCACAAATACT +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKSSLWS*AKFTNT
Trigger: AGTATTTGTGAACTTTGCCAAGGACCAAAGTGATGA...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATATCATCACTTTGGTCCTaGGCAAAGTTCACAAATACT +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAISSLWS*AKFTNT
Trigger: AGTATTTGTGAACTTTGCCAAGGACCAAAGTGATGA...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp TCCCTGTTGAAGAATTCATTGTTTAGACTTGTGACCCTTATACTTTCTTGGCTTACTACTGTCTGGTTTTaGTGTAATGAGAGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SLLKNSLFRLVTLILSWLTTVWF*CNERSF
Trigger: AAAAGACCTCTCATTACACAAAAACCAGACAGTAGT...AAGCCAAGAAAGTATAAGGGTCACAAGTCTAAACAATGAATTCTTCAACAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTGTTCTTTAAGCTTTaGGCTATGATCTGCACATAC +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCLFFKL*AMICTY
Trigger: GTATGTGCAGATCATAGCCAAAAGCTTAAAGAACAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCTTATTGAACCACACCTaGACATTATTTTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCLLNHT*TLFLVS
Trigger: GGACACCAAAAATAATGTCAAGGTGTGGTTCAATAA...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAATCTTCGTCAACTCCTaGATTTCTAAGATGTCATTC +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIIFVNS*ISKMSF
Trigger: GAATGACATCTTAGAAATCAAGGAGTTGACGAAGAT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAAAAGTTCACAAATACTaGGTCAAGTGTTGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIKVHKY*VKCCLR
Trigger: TCTCAGACAACACTTGACCAAGTATTTGTGAACTTT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAACTACTGTCTGGTTTTaGTGTAATGAGAGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAITTVWF*CNERSF
Trigger: AAAAGACCTCTCATTACACAAAAACCAGACAGTAGT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AATGGGGTATCCAATATCTGCAAAGCCAATTATTTGAAGGTACTAAATGCCATAATTCAAGTCTTTCACTaGAGAGCCATACAAGACATA +
Preference number: 5 (lower is better)
Translates to: NGVSNICKANYLKVLNAIIQVFH*RAIQDI
Trigger: TATGTCTTGTATGGCTCTCAAGTGAAAGACTTGAAT...TATGGCATTTAGTACCTTCAAATAATTGGCTTTGCAGATATTGGATACCCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp GTATTTCTCATATTCACAGTTGTTAATAAGTTTTCTGAGGTGTCCCAAAGATGCCATTACCTTTTGATTTaGATCAATAATCGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: VFLIFTVVNKFSEVSQRCHYLLI*INNRWP
Trigger: TGGCCAGCGATTATTGATCAAAATCAAAAGGTAATG...GCATCTTTGGGACACCTCAGAAAACTTATTAACAACTGTGAATATGAGAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS-3UTR CAA 90 bp AAACCCATATGTCCATTGGGTTCCATAATAGAGTTTCACATAGGTATAGGTAAAAACTTTCTGAAAAACTaGGCACTAATAACTCTGGCA +
Preference number: 5 (lower is better)
Translates to: KPICPLGSIIEFHIGIGKNFLKN*ALITLA
Trigger: TGCCAGAGTTATTAGTGCCAAGTTTTTCAGAAAGTT...TTTACCTATACCTATGTGAAACTCTATTATGGAACCCAATGGACATATGGGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp CGGCTCTGTTGGTGCGCGGAGCTCCCCGCCCTGCCCTaGCGCAGCCCGGGAGAGAAGGGTCGGCTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: RLCWCAELPALP*RSPGEKGRLGS
Trigger: AGAGCCGAGCCGACCCTTCTCTCCCGGGCTGCGGCAGGGCAGGGCGGGGAGCTCCGCGCACCAACAGAGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS GCA 72 bp AGAACCGGCTCTGTTGGTGCGCGGAGCTCCCCGCCCTaGCCTGCCGCAGCCCGGGAGAGAAGGGTCGGCTCG +
Preference number: 6 (lower is better)
Translates to: RTGSVGARSSPP*PAAARERRVGS
Trigger: CGAGCCGACCCTTCTCTCCCGGGCTGCGGCAGGGCAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 72 bp CTCAGCCAGCACCCCCAGCGTGTGGCTCGGGAGCCCTaGAAGGCAGCGGCCAGAGCTCACAGCAGGGACGCC +
Preference number: 6 (lower is better)
Translates to: LSQHPQRVAREP*KAAARAHSRDA
Trigger: GGCGTCCCTGCTGTGAGCTCTGGCCGCTGCCTTCCAGGGCTCCCGAGCCACACGCTGGGGGTGCTGGCTGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS GCA 72 bp CTGCCGCAGCCCGGGAGAGAAGGGTCGGCTCGGCTCTaGGGGTCCCGGCCCCACTCACTCTCGCTCGCAATT +
Preference number: 6 (lower is better)
Translates to: LPQPGREGSARL*GSRPHSLSLAI
Trigger: AATTGCGAGCGAGAGTGAGTGGGGCCGGGACCCGCAGAGCCGAGCCGACCCTTCTCTCCCGGGCTGCGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp AAACAAGGAGCAAAGCGCCCTGAGAACCGGCTCTGTTaGTGCGCGGAGCTCCCCGCCCTGCCCTGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: KQGAKRPENRLC*CAELPALPCRS
Trigger: GCTGCGGCAGGGCAGGGCGGGGAGCTCCGCGCACCAACAGAGCCGGTTCTCAGGGCGCTTTGCTCCTTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 72 bp CCCATTCTGGAAGAGGTCCATGATGGTCTGGGGAACTaGGGCAGTGGTCCACTCTTCCTCCCCTGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: PILEEVHDGLGN*GSGPLFLPCLA
Trigger: TGCCAGGCAGGGGAGGAAGAGTGGACCACTGCCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GCATCATCTTCAGTGAACGGGCGAAGACAGCTCTGCTaGTCCCCGAAGGCCCGCCTGTTTCGTCTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: ASSSVNGRRQLC*SPKARLFRLAG
Trigger: GCCAGCAAGACGAAACAGGCGGGCCTTCGGGGACAAGCAGAGCTGTCTTCGCCCGTTCACTGAAGATGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp GGATCAGCAGCATCATCTTCAGTGAACGGGCGAAGACAGCTCTGCTaGTCCCCGAAGGCCCGCCTGTTTCGTCTTGCTGGCAAGGTACCA +
Preference number: 6 (lower is better)
Translates to: GSAASSSVNGRRQLC*SPKARLFRLAGKVP
Trigger: TGGTACCTTGCCAGCAAGACGAAACAGGCGGGCCTTCGGGGACAAGCAGAGCTGTCTTCGCCCGTTCACTGAAGATGATGCTGCTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp GGGATTGGGTTTCCTTCCATACAGCGGGTCCCGAAGCCAGGGTCTTaGGTGAGGGCGTTTAAGAGTTCCAGGGTTCCCGTGTCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: GIGFPSIQRVPKPGS*VRAFKSSRVPVSSG
Trigger: TCCTGAGGACACGGGAACCCTGGAACTCTTAAACGCCCTCACCAAAGACCCTGGCTTCGGGACCCGCTGTATGGAAGGAAACCCAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 72 bp CTTCCATACAGCGGGTCCCGAAGCCAGGGTCTTTGGTaGGGGCGTTTAAGAGTTCCAGGGTTCCCGTGTCCT +
Preference number: 6 (lower is better)
Translates to: LPYSGSRSQGLW*GRLRVPGFPCP
Trigger: AGGACACGGGAACCCTGGAACTCTTAAACGCCCTCACCAAAGACCCTGGCTTCGGGACCCGCTGTATGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GTCCAGTTCCCATTCTGGAAGAGGTCCATGATGGTCTaGGGAACTGGGGCAGTGGTCCACTCTTCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: VQFPFWKRSMMV*GTGAVVHSSSP
Trigger: AGGGGAGGAAGAGTGGACCACTGCCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGAATGGGAACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp AGCTCTGCTTGTCCCCGAAGGCCCGCCTGTTTCGTCTaGCTGGCAAGGTACCATCTGAGGTCTCAGCATCCA +
Preference number: 6 (lower is better)
Translates to: SSACPRRPACFV*LARYHLRSQHP
Trigger: TGGATGCTGAGACCTCAGATGGTACCTTGCCAGCAAGACGAAACAGGCGGGCCTTCGGGGACAAGCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 72 bp CTGAAAGTGAGGTTCTTCCACAGCAGCAACCTCAGCTaGGGCCAACAAGCCATGTTCCCTCAGCCAGCACCC +
Preference number: 6 (lower is better)
Translates to: LKVRFFHSSNLS*GQQAMFPQPAP
Trigger: GGGTGCTGGCTGAGGGAACATGGCTTGTTGGCCTCAGCTGAGGTTGCTGCTGTGGAAGAACCTCACTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS TCA 72 bp GGCTGGGGTACTTGCCAAAGGGTGGCACGATCAGGCTaGACACAAGGGCAATGCAGACAAACACAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: GWGTCQRVARSG*TQGQCRQTQLA
Trigger: TGCCAGCTGTGTTTGTCTGCATTGCCCTTGTGTTCAGCCTGATCGTGCCACCCTTTGGCAAGTACCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp AGTTTTCTTCTCGGTGCCCGTCAGCACCCTGATGATTaGCTGCTCCACCACATCCTGCAAGTAGGCGAAGCC +
Preference number: 6 (lower is better)
Translates to: SFLLGARQHPDD*LLHHILQVGEA
Trigger: GGCTTCGCCTACTTGCAGGATGTGGTGGAGCAGGCAATCATCAGGGTGCTGACGGGCACCGAGAAGAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp TTTCCTTCCATACAGCGGGTCCCGAAGCCAGGGTCTTaGGTGAGGGCGTTTAAGAGTTCCAGGGTTCCCGTG +
Preference number: 6 (lower is better)
Translates to: FPSIQRVPKPGS*VRAFKSSRVPV
Trigger: CACGGGAACCCTGGAACTCTTAAACGCCCTCACCAAAGACCCTGGCTTCGGGACCCGCTGTATGGAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GCCCCTGGGGGACACACAGGCAGCATCTTCTTGATTTaGTCGCTGCTACACTGGCATGCAGGTGAAGGGTTC +
Preference number: 6 (lower is better)
Translates to: APGGHTGSIFLI*SLLHWHAGEGF
Trigger: GAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTGTGTGTCCCCCAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp GTCCAGGCCCATGATCCGCATGGTCTCTTTCAGCCGTaGCTCCTTCTCATACACGATGCCCTTGATGATCAC +
Preference number: 6 (lower is better)
Translates to: VQAHDPHGLFQP*LLLIHDALDDH
Trigger: GTGATCATCAAGGGCATCGTGTATGAGAAGGAGGCACGGCTGAAAGAGACCATGCGGATCATGGGCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS GCA 72 bp AGCTTGCTTGATGGCAAACCAACATCCAGGGCCATCTaGTCCATCTCCGCCTTCACGTGCTTCTCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: SLLDGKPTSRAI*SISAFTCFSES
Trigger: GCTCTCTGAGAAGCACGTGAAGGCGGAGATGGAGCAGATGGCCCTGGATGTTGGTTTGCCATCAAGCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp AGACATCGATGGTCAGCGTGTCACTCTCATGGTCGCTaGCCAGGCCAGCATCAGAACTGCTCTGAGAAACAC +
Preference number: 6 (lower is better)
Translates to: RHRWSACHSHGR*PGQHQNCSEKH
Trigger: GTGTTTCTCAGAGCAGTTCTGATGCTGGCCTGGGCAGCGACCATGAGAGTGACACGCTGACCATCGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374736.8
CDS CCA 72 bp GCAGGTGAAGGGTTCTGCATTGTCCAGTTCCCATTCTaGAAGAGGTCCATGATGGTCTGGGGAACTGGGGCA +
Preference number: 6 (lower is better)
Translates to: AGEGFCIVQFPF*KRSMMVWGTGA
Trigger: TGCCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGAATGGGAACTGGACAATGCAGAACCCTTCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp TCCCTCGGGATGCCCGCAGACAATACGAGACACAGCCTGGTAGATTaGGGTGGAGGAGCTGGAGCTGTTCACATTGGTCAGAAACATCAC +
Preference number: 6 (lower is better)
Translates to: SLGMPADNTRHSLVD*GGGAGAVHIGQKHH
Trigger: GTGATGTTTCTGACCAATGTGAACAGCTCCAGCTCCTCCACCCAAATCTACCAGGCTGTGTCTCGTATTGTCTGCGGGCATCCCGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 72 bp TCTGCATTGTCCAGTTCCCATTCTGGAAGAGGTCCATaGTGGTCTGGGGAACTGGGGCAGTGGTCCACTCTT +
Preference number: 6 (lower is better)
Translates to: SALSSSHSGRGP*WSGELGQWSTL
Trigger: AAGAGTGGACCACTGCCCCAGTTCCCCAGACCATCATGGACCTCTTCCAGAATGGGAACTGGACAATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp CAGGAAGGAGGTGATCTGGCCCTCATAAAAATTCAGTaGCAGGCCATCGACAGCCACCTTCATCCCATCTCG +
Preference number: 6 (lower is better)
Translates to: QEGGDLALIKIQ*QAIDSHLHPIS
Trigger: CGAGATGGGATGAAGGTGGCTGTCGATGGCCTGGCACTGAATTTTTATGAGGGCCAGATCACCTCCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp CTGCTGTCCAACAGCATCCGGACAAGGTCCATTTCTTaGCTGTTCTCCATGAAGGTCCAGATCTTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LLSNSIRTRSIS*LFSMKVQILGL
Trigger: CAGCCCCAAGATCTGGACCTTCATGGAGAACAGCCAAGAAATGGACCTTGTCCGGATGCTGTTGGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp TCCTCTGGGTGCTTGGCCAAAAACGCCACGATGTCTTaGGCTGTCCAATCTAAGCCATCCAACTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: SSGCLAKNATMS*AVQSKPSNCCS
Trigger: GGAACAGCAGTTGGATGGCTTAGATTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GGTGTACACAGAACCATTACTGGACTGGACATCCTCTaGGTGCTTGGCCAAAAACGCCACGATGTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: GVHRTITGLDIL*VLGQKRHDVLG
Trigger: GCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GCTTCTCTCCAGGTGTACACAGAACCATTACTGGACTaGACATCCTCTGGGTGCTTGGCCAAAAACGCCACG +
Preference number: 6 (lower is better)
Translates to: ASLQVYTEPLLD*TSSGCLAKNAT
Trigger: CGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTACACCTGGAGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp AGAGGAATGAGGCTACTAATGAACCAGCTAAACCAGAGGATGCTGTaGTCCAGGCCCATGATCCGCATGGTCTCTTTCAGCCGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: RGMRLLMNQLNQRML*SRPMIRMVSFSRAS
Trigger: GGAGGCACGGCTGAAAGAGACCATGCGGATCATGGGCCTGGACAACAGCATCCTCTGGTTTAGCTGGTTCATTAGTAGCCTCATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS TCA 72 bp CTGACAAATGTGTACTGTTCGTTGTACATCCAGGGCTaGAGTTCCAGGCTGGGGTACTTGCCAAAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: LTNVYCSLYIQG*SSRLGYLPKGG
Trigger: GCCACCCTTTGGCAAGTACCCCAGCCTGGAACTTCAGCCCTGGATGTACAACGAACAGTACACATTTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 72 bp CCAGTAGCTGCACAACGTAATTGCCATCAGCCCTACTaGGGAAGCTGGAGGCATCAGCTTACCTTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: PVAAQRNCHQPY*GSWRHQLTLWR
Trigger: TCTCCACAAGGTAAGCTGATGCCTCCAGCTTCCTCAGTAGGGCTGATGGCAATTACGTTGTGCAGCTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374733.1
CDS GCA 72 bp ATGCTGAACAGCTCCTGGGCCAGAGTCCCAAGACTATaGAGCAATGTTTTTGTGGCTTCAGCCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: MLNSSWARVPRL*SNVFVASASSL
Trigger: CAAGGAGCTGGCTGAAGCCACAAAAACATTGCTGCATAGTCTTGGGACTCTGGCCCAGGAGCTGTTCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp TACACAGAACCATTACTGGACTGGACATCCTCTGGGTaGTTGGCCAAAAACGCCACGATGTCTTGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: YTEPLLDWTSSG*LAKNATMSWAV
Trigger: GACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp CAGGACTCTCAAACAGGTTGTCCCACTGCACTCCAATaGCCTGCTCCTCAAAAAGGGCAAAGTACTCACAGC +
Preference number: 6 (lower is better)
Translates to: QDSQTGCPTALQ*PAPQKGQSTHS
Trigger: GCTGTGAGTACTTTGCCCTTTTTGAGGAGCAGGGCATTGGAGTGCAGTGGGACAACCTGTTTGAGAGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS GCA 72 bp TTGTCGCTGCTACACTGGCATGCAGGTGAAGGGTTCTaGATTGTCCAGTTCCCATTCTGGAAGAGGTCCATG +
Preference number: 6 (lower is better)
Translates to: LSLLHWHAGEGF*IVQFPFWKRSM
Trigger: CATGGACCTCTTCCAGAATGGGAACTGGACAATGCAGAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GGTAGATTTGGGTGGAGGAGCTGGAGCTGTTCACATTaGTCAGAAACATCACCTCCTGTCGCATGTCACTCC +
Preference number: 6 (lower is better)
Translates to: GRFGWRSWSCSH*SETSPPVACHS
Trigger: GGAGTGACATGCGACAGGAGGTGATGTTTCTGACCAATGTGAACAGCTCCAGCTCCTCCACCCAAATCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp CAGAACCATTACTGGACTGGACATCCTCTGGGTGCTTaGCCAAAAACGCCACGATGTCTTGGGCTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: QNHYWTGHPLGA*PKTPRCLGLSN
Trigger: ATTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp CCACAGCAAACACGGACAGGAAGACAAACACCACGCTaGGATCACTGTAGGGCAGCAGGTTTCCTAACTTCA +
Preference number: 6 (lower is better)
Translates to: PQQTRTGRQTPR*DHCRAAGFLTS
Trigger: TGAAGTTAGGAAACCTGCTGCCCTACAGTGATCCCAGCGTGGTGTTTGTCTTCCTGTCCGTGTTTGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS CCA 72 bp TCATCCCATCTCGGTAGACTTTTACCAGGTTCTGAATaGACACGCCCAGCTTCAAGTGGGTGGGTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SSHLGRLLPGSE*TRPASSGWVPP
Trigger: AGGAGGAACCCACCCACTTGAAGCTGGGCGTGTCCATTCAGAACCTGGTAAAAGTCTACCGAGATGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp ACAGAACCATTACTGGACTGGACATCCTCTGGGTGCTaGGCCAAAAACGCCACGATGTCTTGGGCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: TEPLLDWTSSGC*AKNATMSWAVQ
Trigger: TTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp CGGACAAGGTCCATTTCTTGGCTGTTCTCCATGAAGGTCCAGATCTaGGGGCTGAGTTCCTCCCACATGCCTTCCAGATCATGGAACACA +
Preference number: 6 (lower is better)
Translates to: RTRSISWLFSMKVQI*GLSSSHMPSRSWNT
Trigger: TGTGTTCCATGATCTGGAAGGCATGTGGGAGGAACTCAGCCCCAAGATCTGGACCTTCATGGAGAACAGCCAAGAAATGGACCTTGTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp CAGGTGTACACAGAACCATTACTGGACTGGACATCCTCTGGGTGCTaGGCCAAAAACGCCACGATGTCTTGGGCTGTCCAATCTAAGCCA +
Preference number: 6 (lower is better)
Translates to: QVYTEPLLDWTSSGC*AKNATMSWAVQSKP
Trigger: TGGCTTAGATTGGACAGCCCAAGACATCGTGGCGTTTTTGGCCAAGCACCCAGAGGATGTCCAGTCCAGTAATGGTTCTGTGTACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp GTGGTGAGATTGAAGCCATCTTCCTCCACAGGACTCTCAAACAGGTaGTCCCACTGCACTCCAATGCCCTGCTCCTCAAAAAGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: VVRLKPSSSTGLSNR*SHCTPMPCSSKRAK
Trigger: CTTTGCCCTTTTTGAGGAGCAGGGCATTGGAGTGCAGTGGGACAACCTGTTTGAGAGTCCTGTGGAGGAAGATGGCTTCAATCTCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS CAA 90 bp GCTGTCCAATCTAAGCCATCCAACTGCTGTTCCCAAAAGTGGTCATaGTCCCTGCTGTCCAACAGCATCCGGACAAGGTCCATTTCTTGG +
Preference number: 6 (lower is better)
Translates to: AVQSKPSNCCSQKWS*SLLSNSIRTRSISW
Trigger: CCAAGAAATGGACCTTGTCCGGATGCTGTTGGACAGCAGGGACAATGACCACTTTTGGGAACAGCAGTTGGATGGCTTAGATTGGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp CACCCGCAGAAAGATGTCATCAACGTAACAGGGATAGGGCATCTGTaGCATATAGACACCAGTTTTCTTCTCGGTGCCCGTCAGCACCCT +
Preference number: 6 (lower is better)
Translates to: HPQKDVINVTGIGHL*HIDTSFLLGARQHP
Trigger: AGGGTGCTGACGGGCACCGAGAAGAAAACTGGTGTCTATATGCAACAGATGCCCTATCCCTGTTACGTTGATGACATCTTTCTGCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 72 bp GAAATGCCCAGGTCTGAGAGCCGGTCATCAATCTCATaGAAGAGTTCCACAAAGGCTCCCTCCTTAGCAGCT +
Preference number: 6 (lower is better)
Translates to: EMPRSESRSSIS*KSSTKAPSLAA
Trigger: AGCTGCTAAGGAGGGAGCCTTTGTGGAACTCTTTCATGAGATTGATGACCGGCTCTCAGACCTGGGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GTCCAATCTAAGCCATCCAACTGCTGTTCCCAAAAGTaGTCATTGTCCCTGCTGTCCAACAGCATCCGGACA +
Preference number: 6 (lower is better)
Translates to: VQSKPSNCCSQK*SLSLLSNSIRT
Trigger: TGTCCGGATGCTGTTGGACAGCAGGGACAATGACCACTTTTGGGAACAGCAGTTGGATGGCTTAGATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GAGTTCCACAAAGGCTCCCTCCTTAGCAGCTTCATATaGCAGCACATAGGTCAGCTCATGCCCTATGTCTTC +
Preference number: 6 (lower is better)
Translates to: EFHKGSLLSSFI*QHIGQLMPYVF
Trigger: GAAGACATAGGGCATGAGCTGACCTATGTGCTGCCATATGAAGCTGCTAAGGAGGGAGCCTTTGTGGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GAAGGAGGCCCAGGAGAAACTCACAATACCCTTGGCTaGAAACAGGGAAACACTCACGCACACACAAAAGGA +
Preference number: 6 (lower is better)
Translates to: EGGPGETHNTLG*KQGNTHAHTKG
Trigger: TCCTTTTGTGTGTGCGTGAGTGTTTCCCTGTTTCCAGCCAAGGGTATTGTGAGTTTCTCCTGGGCCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 72 bp TCCATTTCTTGGCTGTTCTCCATGAAGGTCCAGATCTaGGGGCTGAGTTCCTCCCACATGCCTTCCAGATCA +
Preference number: 6 (lower is better)
Translates to: SISWLFSMKVQI*GLSSSHMPSRS
Trigger: TGATCTGGAAGGCATGTGGGAGGAACTCAGCCCCAAGATCTGGACCTTCATGGAGAACAGCCAAGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp AGGCTACTAATGAACCAGCTAAACCAGAGGATGCTGTaGTCCAGGCCCATGATCCGCATGGTCTCTTTCAGC +
Preference number: 6 (lower is better)
Translates to: RLLMNQLNQRML*SRPMIRMVSFS
Trigger: GCTGAAAGAGACCATGCGGATCATGGGCCTGGACAACAGCATCCTCTGGTTTAGCTGGTTCATTAGTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS CAA 72 bp GTCACATCCATCAGGATTGGCTTCAGGATGTCCATGTaGGAACGAAGTACTCGCTCTGCTGCAGCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: VTSIRIGFRMSM*ERSTRSAAASF
Trigger: GAAACTGGCTGCAGCAGAGCGAGTACTTCGTTCCAACATGGACATCCTGAAGCCAATCCTGATGGATGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 90 bp CCATGTTGGAACGAAGTACTCGCTCTGCTGCAGCCAGTTTCTCCCTaGGTAGGCCACAAAGCTCAGAAACTTCTTGGTCACCAAGTTGAA +
Preference number: 6 (lower is better)
Translates to: PCWNEVLALLQPVSP*VGHKAQKLLGHQVE
Trigger: TTCAACTTGGTGACCAAGAAGTTTCTGAGCTTTGTGGCCTACCAAGGGAGAAACTGGCTGCAGCAGAGCGAGTACTTCGTTCCAACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CAA 90 bp CACTCCATGAAGCGAGATATGGTCCGGATTGCCTGGTTAGTCTCGTaGAAAGCTTCTCTCCAGGTGTACACAGAACCATTACTGGACTGG +
Preference number: 6 (lower is better)
Translates to: HSMKRDMVRIAWLVS*KASLQVYTEPLLDW
Trigger: CCAGTCCAGTAATGGTTCTGTGTACACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGCAATCCGGACCATATCTCGCTTCATGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp TTTCTCTGCATTCCACCTGACAGCTGGCTTGTTTTGCTTTTCAGCTaGCTTGATGGCAAACCAACATCCAGGGCCATCTGCTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: FLCIPPDSWLVLLFS*LDGKPTSRAICSIS
Trigger: GGAGATGGAGCAGATGGCCCTGGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGCAAAACAAGCCAGCTGTCAGGTGGAATGCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp TCATCACATGTCACATCCATCAGGATTGGCTTCAGGATGTCCATGTaGGAACGAAGTACTCGCTCTGCTGCAGCCAGTTTCTCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: SSHVTSIRIGFRMSM*ERSTRSAAASFSLG
Trigger: ACCAAGGGAGAAACTGGCTGCAGCAGAGCGAGTACTTCGTTCCAACATGGACATCCTGAAGCCAATCCTGATGGATGTGACATGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 90 bp AAAGAAGAGTTTCTCTCCCCATCATGTTGGGCTTTGCATCTCCGGTaGCTGCTACTGCTGCACTTCTTGGCACAGTTAACTGCCCATGTG +
Preference number: 6 (lower is better)
Translates to: KEEFLSPSCWALHLR*LLLLHFLAQLTAHV
Trigger: CACATGGGCAGTTAACTGTGCCAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAACTCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS GCA 72 bp CATCCAACTGCTGTTCCCAAAAGTGGTCATTGTCCCTaGTGTCCAACAGCATCCGGACAAGGTCCATTTCTT +
Preference number: 6 (lower is better)
Translates to: HPTAVPKSGHCP*CPTASGQGPFL
Trigger: AAGAAATGGACCTTGTCCGGATGCTGTTGGACAGCAGGGACAATGACCACTTTTGGGAACAGCAGTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp GTTGACACACTCCATGAAGCGAGATATGGTCCGGATTaGCTGGTTAGTCTCGTTGAAAGCTTCTCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: VDTLHEARYGPD*LVSLVESFSPG
Trigger: ACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGCAATCCGGACCATATCTCGCTTCATGGAGTGTGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp TCTCATCACTTTCCTCGCCAAACCAGTAGGACTTGGTaGAAGGAAAATACCAGGGCCTGGGAATTCCGTACT +
Preference number: 6 (lower is better)
Translates to: SHHFPRQTSRTW*KENTRAWEFRT
Trigger: AGTACGGAATTCCCAGGCCCTGGTATTTTCCTTGCACCAAGTCCTACTGGTTTGGCGAGGAAAGTGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp ACACACTCCATGAAGCGAGATATGGTCCGGATTGCCTaGTTAGTCTCGTTGAAAGCTTCTCTCCAGGTGTAC +
Preference number: 6 (lower is better)
Translates to: THSMKRDMVRIA*LVSLKASLQVY
Trigger: GTACACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGCAATCCGGACCATATCTCGCTTCATGGAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp ACAGGCAGCATCTTCTTGATTTTGTCGCTGCTACACTaGCATGCAGGTGAAGGGTTCTGCATTGTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: TGSIFLILSLLH*HAGEGFCIVQF
Trigger: GAACTGGACAATGCAGAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp CATACAGCAAAAGTAGAAGGGCTAGCACAGGCAGATTaGTGGAGGACACATAGGACTTCTGCTGGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: HTAKVEGLAQAD*WRTHRTSAGSR
Trigger: TCTGCTTCCAGCAGAAGTCCTATGTGTCCTCCACCAATCTGCCTGTGCTAGCCCTTCTACTTTTGCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp AGAACACTTCCAGGAAATGCAAGTCCAAAGAAATCCTaGACAGGCTTCAGGTCCGGGTTGGACCCTGCTATT +
Preference number: 6 (lower is better)
Translates to: RTLPGNASPKKS*TGFRSGLDPAI
Trigger: AATAGCAGGGTCCAACCCGGACCTGAAGCCTGTCCAGGATTTCTTTGGACTTGCATTTCCTGGAAGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp TCACATCCATCAGGATTGGCTTCAGGATGTCCATGTTaGAACGAAGTACTCGCTCTGCTGCAGCCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: SHPSGLASGCPC*NEVLALLQPVS
Trigger: AGAAACTGGCTGCAGCAGAGCGAGTACTTCGTTCCAACATGGACATCCTGAAGCCAATCCTGATGGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 72 bp CAGAACTTCCTCTCATCCAGCAGCTCCATGGACTTGTaGATGAGCCAGACTTCTGTTGCTATGGGTTCTAGC +
Preference number: 6 (lower is better)
Translates to: QNFLSSSSSMDL*MSQTSVAMGSS
Trigger: GCTAGAACCCATAGCAACAGAAGTCTGGCTCATCAACAAGTCCATGGAGCTGCTGGATGAGAGGAAGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GTGTCAAACAGCATCATGGAGACCGAAGTGGTGAGATaGAAGCCATCTTCCTCCACAGGACTCTCAAACAGG +
Preference number: 6 (lower is better)
Translates to: VSNSIMETEVVR*KPSSSTGLSNR
Trigger: CCTGTTTGAGAGTCCTGTGGAGGAAGATGGCTTCAATCTCACCACTTCGGTCTCCATGATGCTGTTTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000494467.1
ENST00000678995.1
CDS CAA 72 bp ATTCCACCTGACAGCTGGCTTGTTTTGCTTTTCAGCTaGCTTGATGGCAAACCAACATCCAGGGCCATCTGC +
Preference number: 6 (lower is better)
Translates to: IPPDSWLVLLFS*LDGKPTSRAIC
Trigger: GCAGATGGCCCTGGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGCAAAACAAGCCAGCTGTCAGGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp TTTCTCTCCCCATCATGTTGGGCTTTGCATCTCCGGTaGCTGCTACTGCTGCACTTCTTGGCACAGTTAACT +
Preference number: 6 (lower is better)
Translates to: FLSPSCWALHLR*LLLLHFLAQLT
Trigger: AGTTAACTGTGCCAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 90 bp TCATGTTGGGCTTTGCATCTCCGGTTGCTGCTACTGCTGCACTTCTaGGCACAGTTAACTGCCCATGTGCAATGTCATCACATGTCACAT +
Preference number: 6 (lower is better)
Translates to: SCWALHLRLLLLLHF*AQLTAHVQCHHMSH
Trigger: ATGTGACATGTGATGACATTGCACATGGGCAGTTAACTGTGCCAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 90 bp GGTACAGAAGCACATATTGAAAGAAGAGTTTCTCTCCCCATCATGTaGGGCTTTGCATCTCCGGTTGCTGCTACTGCTGCACTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: GTEAHIERRVSLPIM*GFASPVAATAALLG
Trigger: GCCAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAACTCTTCTTTCAATATGTGCTTCTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS TCA 72 bp CTTCTTGATTTTGTCGCTGCTACACTGGCATGCAGGTaGAGGGTTCTGCATTGTCCAGTTCCCATTCTGGAA +
Preference number: 6 (lower is better)
Translates to: LLDFVAATLACR*RVLHCPVPILE
Trigger: TTCCAGAATGGGAACTGGACAATGCAGAACCCTTCACCTGCATGCCAGTGTAGCAGCGACAAAATCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp AATATTCAAACCCAGACCCAGCTGACCCTCCCACACTaGCATACTTTCCCCATGTTGCCAAAACACTGCTTT +
Preference number: 6 (lower is better)
Translates to: NIQTQTQLTLPH*HTFPMLPKHCF
Trigger: AAAGCAGTGTTTTGGCAACATGGGGAAAGTATGGCAGTGTGGGAGGGTCAGCTGGGTCTGGGTTTGAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CCA 72 bp TTAGTGTTCTCAGGATTGGCTTCAGGATGTCCATGTTaGAACGAAGTACTCGCTCTGCTGCAGCCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: LVFSGLASGCPC*NEVLALLQPVS
Trigger: AGAAACTGGCTGCAGCAGAGCGAGTACTTCGTTCCAACATGGACATCCTGAAGCCAATCCTGAGAACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp CACCATGTCGATGAGCCCTCGTCCCAGGCAAAAATGTaGGAAGATCAAGAACACGGACTTCAGGATATCATT +
Preference number: 6 (lower is better)
Translates to: HHVDEPSSQAKM*EDQEHGLQDII
Trigger: AATGATATCCTGAAGTCCGTGTTCTTGATCTTCCCACATTTTTGCCTGGGACGAGGGCTCATCGACATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp CACATATTGAAAGAAGAGTTTCTCTCCCCATCATGTTaGGCTTTGCATCTCCGGTTGCTGCTACTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: HILKEEFLSPSC*ALHLRLLLLLH
Trigger: GTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAACTCTTCTTTCAATATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 72 bp TTTAGTGTTCTCAGGATTGGCTTCAGGATGTCCATGTaGGAACGAAGTACTCGCTCTGCTGCAGCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: FSVLRIGFRMSM*ERSTRSAAASF
Trigger: GAAACTGGCTGCAGCAGAGCGAGTACTTCGTTCCAACATGGACATCCTGAAGCCAATCCTGAGAACACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp TCCTCCTCCATGCAGATTTCTGATATTCTCTTCTGGTaGGAACCAGGGTGGCTCTTCTCATCACTTTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSSMQISDILFW*EPGWLFSSLSS
Trigger: CGAGGAAAGTGATGAGAAGAGCCACCCTGGTTCCAACCAGAAGAGAATATCAGAAATCTGCATGGAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp TTGGTGTCCAGTCCTGTCATAAATCTTCCCAAGCTGTaGAGAAATCGATCTGCAGAACTGTCCTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LVSSPVINLPKL*RNRSAELSLAS
Trigger: GCTGGCCAAGGACAGTTCTGCAGATCGATTTCTCAACAGCTTGGGAAGATTTATGACAGGACTGGACACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp AGCAGTAATTCCATAATGGCTAGGGTTCTCTCCCTTTaGCAGGTTGGCCCGGAGAATGGCATTGTTGATGAC +
Preference number: 6 (lower is better)
Translates to: SSNSIMARVLSL*QVGPENGIVDD
Trigger: GTCATCAACAATGCCATTCTCCGGGCCAACCTGCAAAAGGGAGAGAACCCTAGCCATTATGGAATTACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp TTGAAAGAAGAGTTTCTCTCCCCATCATGTTGGGCTTaGCATCTCCGGTTGCTGCTACTGCTGCACTTCTTG +
Preference number: 6 (lower is better)
Translates to: LKEEFLSPSCWA*HLRLLLLLHFL
Trigger: CAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAACTCTTCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 72 bp GCACATATTGAAAGAAGAGTTTCTCTCCCCATCATGTaGGGCTTTGCATCTCCGGTTGCTGCTACTGCTGCA +
Preference number: 6 (lower is better)
Translates to: AHIERRVSLPIM*GFASPVAATAA
Trigger: TGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAACTCTTCTTTCAATATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS CAA 90 bp AAGCACATATTGAAAGAAGAGTTTCTCTCCCCATCATGTTGGGCTTaGCATCTCCGGTTGCTGCTACTGCTGCACTTCTTGGCACAGTTA +
Preference number: 6 (lower is better)
Translates to: KHILKEEFLSPSCWA*HLRLLLLLHFLAQL
Trigger: TAACTGTGCCAAGAAGTGCAGCAGTAGCAGCAACCGGAGATGCAAAGCCCAACATGATGGGGAGAGAAACTCTTCTTTCAATATGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423487.6
CDS GCA 72 bp TTTGATGGCATCATTAACTTCTTGACTCGGAGGAAGTaGTTGAGTATTACTGACACCCAGGGAAAAGCCGCC +
Preference number: 6 (lower is better)
Translates to: FDGIINFLTRRK*LSITDTQGKAA
Trigger: GGCGGCTTTTCCCTGGGTGTCAGTAATACTCAAGCACTTCCTCCGAGTCAAGAAGTTAATGATGCCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS GCA 72 bp GAAATCCTGGACAGGCTTCAGGTCCGGGTTGGACCCTaGTATTCGTACAACTATTGTATAACCATCTCCAAA +
Preference number: 6 (lower is better)
Translates to: EILDRLQVRVGP*YSYNYCITISK
Trigger: TTTGGAGATGGTTATACAATAGTTGTACGAATAGCAGGGTCCAACCCGGACCTGAAGCCTGTCCAGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp AGAACTTTGCGCATGTCCTTCATGCTGGTGTCTTTCTaGCTGTATAAAAGAAGCCTCCGAGCATCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: RTLRMSFMLVSF*LYKRSLRASEN
Trigger: GTTCTCAGATGCTCGGAGGCTTCTTTTATACAGCCAGAAAGACACCAGCATGAAGGACATGCGCAAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 72 bp GTCCAAAGAAATCCTGGACAGGCTTCAGGTCCGGGTTaGACCCTGCTATTCGTACAACTATTGTATAACCAT +
Preference number: 6 (lower is better)
Translates to: VQRNPGQASGPG*TLLFVQLLYNH
Trigger: ATGGTTATACAATAGTTGTACGAATAGCAGGGTCCAACCCGGACCTGAAGCCTGTCCAGGATTTCTTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp AAGCGAGATATGGTCCGGATTGCCTGGTTAGTCTCGTaGAAAGCTTCTCTCCAGGTGTACACAGAACCATTA +
Preference number: 6 (lower is better)
Translates to: KRDMVRIAWLVS*KASLQVYTEPL
Trigger: TAATGGTTCTGTGTACACCTGGAGAGAAGCTTTCAACGAGACTAACCAGGCAATCCGGACCATATCTCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp AGCTTTCTCTGCATTCCACCTGACAGCTGGCTTGTTTaGCTTTTCAGCTTGCTTGATGGCAAACCAACATCC +
Preference number: 6 (lower is better)
Translates to: SFLCIPPDSWLV*LFSLLDGKPTS
Trigger: GGATGTTGGTTTGCCATCAAGCAAGCTGAAAAGCAAAACAAGCCAGCTGTCAGGTGGAATGCAGAGAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GATGGCATCATTAACTTCTTGACTCGGAGGAAGTGCTaGAGTATTACTGACACCCAGGGAAAAGCCGCCATA +
Preference number: 6 (lower is better)
Translates to: DGIINFLTRRKC*SITDTQGKAAI
Trigger: TATGGCGGCTTTTCCCTGGGTGTCAGTAATACTCAAGCACTTCCTCCGAGTCAAGAAGTTAATGATGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 72 bp CTATGTGGAGTCGCTTTTTGCTCTGGGAGAGGATGCTaGATATCCTGGCCAGAGAAGATAATGAAGATGGAA +
Preference number: 6 (lower is better)
Translates to: LCGVAFCSGRGC*ISWPEKIMKME
Trigger: TTCCATCTTCATTATCTTCTCTGGCCAGGATATTCAGCATCCTCTCCCAGAGCAAAAAGCGACTCCACATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp GTAATGTTCTCAGAACTTTGCGCATGTCCTTCATGCTaGTGTCTTTCTGGCTGTATAAAAGAAGCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: VMFSELCACPSC*CLSGCIKEASE
Trigger: CTCGGAGGCTTCTTTTATACAGCCAGAAAGACACCAGCATGAAGGACATGCGCAAAGTTCTGAGAACATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CAA 72 bp CTGGATTTCTTGATCTGCTGTAATGTTCTCAGAACTTaGCGCATGTCCTTCATGCTGGTGTCTTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LDFLICCNVLRT*RMSFMLVSFWL
Trigger: CAGCCAGAAAGACACCAGCATGAAGGACATGCGCAAAGTTCTGAGAACATTACAGCAGATCAAGAAATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CAA 72 bp TTGATGAGCCAGACTTCTGTTGCTATGGGTTCTAGCTaGTTCAGGTTGACACACTCCATGAAGCGAGATATG +
Preference number: 6 (lower is better)
Translates to: LMSQTSVAMGSS*FRLTHSMKRDM
Trigger: CATATCTCGCTTCATGGAGTGTGTCAACCTGAACAAGCTAGAACCCATAGCAACAGAAGTCTGGCTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp AAAGATGTCATCAACGTAACAGGGATAGGGCATCTGTaGCATATAGACACCAGTTTTCTTCTCGGTGCCCGT +
Preference number: 6 (lower is better)
Translates to: KDVINVTGIGHL*HIDTSFLLGAR
Trigger: ACGGGCACCGAGAAGAAAACTGGTGTCTATATGCAACAGATGCCCTATCCCTGTTACGTTGATGACATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp CATTTGTTTGATGGCATCATTAACTTCTTGACTCGGAGGAAGTGCTaGAGTATTACTGACACCCAGGGAAAAGCCGCCATACCTAAACTC +
Preference number: 6 (lower is better)
Translates to: HLFDGIINFLTRRKC*SITDTQGKAAIPKL
Trigger: GAGTTTAGGTATGGCGGCTTTTCCCTGGGTGTCAGTAATACTCAAGCACTTCCTCCGAGTCAAGAAGTTAATGATGCCATCAAACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp ATGATTGAAAGCAGTAATTCCATAATGGCTAGGGTTCTCTCCCTTTaGCAGGTTGGCCCGGAGAATGGCATTGTTGATGACATTCAGGAA +
Preference number: 6 (lower is better)
Translates to: MIESSNSIMARVLSL*QVGPENGIVDDIQE
Trigger: TTCCTGAATGTCATCAACAATGCCATTCTCCGGGCCAACCTGCAAAAGGGAGAGAACCCTAGCCATTATGGAATTACTGCTTTCAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp ACATTATTTTTGGTGTCCAGTCCTGTCATAAATCTTCCCAAGCTGTaGAGAAATCGATCTGCAGAACTGTCCTTGGCCAGCTTTAGGTGT +
Preference number: 6 (lower is better)
Translates to: TLFLVSSPVINLPKL*RNRSAELSLASFRC
Trigger: ACACCTAAAGCTGGCCAAGGACAGTTCTGCAGATCGATTTCTCAACAGCTTGGGAAGATTTATGACAGGACTGGACACCAAAAATAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS TCA 72 bp AACCCAGAGAAGGTTTCATTGTCCACCAGGAAATCTTaGAGCTTCAAGTTTGAGCTGGATTTCTTGATCTGC +
Preference number: 6 (lower is better)
Translates to: NPEKVSLSTRKS*SFKFELDFLIC
Trigger: GCAGATCAAGAAATCCAGCTCAAACTTGAAGCTTCAAGATTTCCTGGTGGACAATGAAACCTTCTCTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374733.1
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS GCA 72 bp GCATTGTTGATGACATTCAGGAAAGAGCTGATTGCATaGCAGCCCTTGTTATTGAACCACACCTTGACATTA +
Preference number: 6 (lower is better)
Translates to: ALLMTFRKELIA*QPLLLNHTLTL
Trigger: TAATGTCAAGGTGTGGTTCAATAACAAGGGCTGGCATGCAATCAGCTCTTTCCTGAATGTCATCAACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GAAAAGCCGCCATACCTAAACTCATTCACCCAGATCTaGTTCTTTAAGCTTTTGGCTATGATCTGCACATAC +
Preference number: 6 (lower is better)
Translates to: EKPPYLNSFTQI*FFKLLAMICTY
Trigger: GTATGTGCAGATCATAGCCAAAAGCTTAAAGAACAAGATCTGGGTGAATGAGTTTAGGTATGGCGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GAGAGGTCTTTTAAGTGGTCATCATCACTTTGGTCCTaGGCAAAGTTCACAAATACTTGGTCAAGTGTTGTC +
Preference number: 6 (lower is better)
Translates to: ERSFKWSSSLWS*AKFTNTWSSVV
Trigger: GACAACACTTGACCAAGTATTTGTGAACTTTGCCAAGGACCAAAGTGATGATGACCACTTAAAAGACCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GATGTGAGAACTGCAACGTCCACTACTGTCTGGTTTTaGTGTAATGAGAGGTCTTTTAAGTGGTCATCATCA +
Preference number: 6 (lower is better)
Translates to: DVRTATSTTVWF*CNERSFKWSSS
Trigger: TGATGATGACCACTTAAAAGACCTCTCATTACACAAAAACCAGACAGTAGTGGACGTTGCAGTTCTCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp GCTCAGAAACTTCTTGGTCACCAAGTTGAATCATCTCTTCTGATTTaGATCCATTGCACAGACTTGTCAAATGTAACTGGTAGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: AQKLLGHQVESSLLI*IHCTDLSNVTGSLA
Trigger: TGCAAGGCTACCAGTTACATTTGACAAGTCTGTGCAATGGATCAAAATCAGAAGAGATGATTCAACTTGGTGACCAAGAAGTTTCTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 72 bp AGAGGTCTTTTAAGTGGTCATCATCACTTTGGTCCTTaGCAAAGTTCACAAATACTTGGTCAAGTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: RGLLSGHHHFGP*QSSQILGQVLS
Trigger: AGACAACACTTGACCAAGTATTTGTGAACTTTGCCAAGGACCAAAGTGATGATGACCACTTAAAAGACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CCA 72 bp ACTGTCTGGTTTTTGTGTAATGAGAGGTCTTTTAAGTaGTCATCATCACTTTGGTCCTTGGCAAAGTTCACA +
Preference number: 6 (lower is better)
Translates to: TVWFLCNERSFK*SSSLWSLAKFT
Trigger: TGTGAACTTTGCCAAGGACCAAAGTGATGATGACCACTTAAAAGACCTCTCATTACACAAAAACCAGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp GTGTTTCTTCATTTGTTTGATGGCATCATTAACTTCTaGACTCGGAGGAAGTGCTTGAGTATTACTGACACC +
Preference number: 6 (lower is better)
Translates to: VFLHLFDGIINF*TRRKCLSITDT
Trigger: GGTGTCAGTAATACTCAAGCACTTCCTCCGAGTCAAGAAGTTAATGATGCCATCAAACAAATGAAGAAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 90 bp CACCAAGTTGAATCATCTCTTCTGATTTTGATCCATTGCACAGACTaGTCAAATGTAACTGGTAGCCTTGCAAAAATACCTTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: HQVESSLLILIHCTD*SNVTGSLAKIPCGE
Trigger: TTCTCCACAAGGTATTTTTGCAAGGCTACCAGTTACATTTGACAAGTCTGTGCAATGGATCAAAATCAGAAGAGATGATTCAACTTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CCA 72 bp TGTAATGAGAGGTCTTTTAAGTGGTCATCATCACTTTaGTCCTTGGCAAAGTTCACAAATACTTGGTCAAGT +
Preference number: 6 (lower is better)
Translates to: CNERSFKWSSSL*SLAKFTNTWSS
Trigger: ACTTGACCAAGTATTTGTGAACTTTGCCAAGGACCAAAGTGATGATGACCACTTAAAAGACCTCTCATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374736.8
ENST00000678995.1
CDS CAA 72 bp CTTCTTGGTCACCAAGTTGAATCATCTCTTCTGATTTaGATCCATTGCACAGACTTGTCAAATGTAACTGGT +
Preference number: 6 (lower is better)
Translates to: LLGHQVESSLLI*IHCTDLSNVTG
Trigger: ACCAGTTACATTTGACAAGTCTGTGCAATGGATCAAAATCAGAAGAGATGATTCAACTTGGTGACCAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1
CDS CAA 72 bp GAATCATCTCTTCTGATTTTGATCCATTGCACAGACTaGTCAAATGTAACTGGTAGCCTTGCAAAAATACCT +
Preference number: 6 (lower is better)
Translates to: ESSLLILIHCTD*SNVTGSLAKIP
Trigger: AGGTATTTTTGCAAGGCTACCAGTTACATTTGACAAGTCTGTGCAATGGATCAAAATCAGAAGAGATGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374736.8
ENST00000423487.6
ENST00000678995.1