RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AATK (Homo sapiens)

Ensembl gene IDs: ENSG00000181409

Ensembl transcript IDs: ENST00000326724.9, ENST00000374792.6, ENST00000417379.6, ENST00000570932.5, ENST00000572339.5, ENST00000572798.1, ENST00000573441.1, ENST00000573469.1, ENST00000575363.1, ENST00000576053.1, ENST00000650574.1

Found 1461 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGCGTGGGCGCAGCCGGGGCGGGTGCGGCCGGGTCTAGGGCCATaGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCC +
Preference number: 1 (lower is better)
Translates to: WAWAQPGRVRPGLGP*RRLPWPSSAGSRRP
Trigger: GGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCACCCGCCCCGGCTGCGCCCACGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR TCA 90 bp CGTCTGCAGCTGAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTaGGGCAGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCA +
Preference number: 1 (lower is better)
Translates to: RLQLRQAPGSLQARK*GRLRRRRPGRARAP
Trigger: TGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTCAGCTGCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CCGGGGCGGGTGCGGCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTaGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCAC +
Preference number: 1 (lower is better)
Translates to: PGRVRPGLGPWRRLP*PSSAGSRRPTRTHH
Trigger: GTGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCACCCGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR GCA 90 bp AGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACCAGGCAAGGGTGGGGGCACAGGGGG +
Preference number: 1 (lower is better)
Translates to: RAAETGPTRAPRATP*PEPPGTRQGWGHRG
Trigger: CCCCCTGTGCCCCCACCCTTGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 90 bp AGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTaGCTCTCAGCCACCACCACGGGCACCGCCGGCGCCTCCTCTTCG +
Preference number: 1 (lower is better)
Translates to: SRLGILSRLRRLRAL*LSATTTGTAGASSS
Trigger: CGAAGAGGAGGCGCCGGCGGTGCCCGTGGTGGTGGCTGAGAGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR GCA 90 bp CCAGAGCCTTGTGCCTCCCCGGAAACCCCAGGCCTGAGACAGACCTaGTCAGACGGCTGCCCAGTGCTCGGCAGGCCCAGCTCTGGCCCG +
Preference number: 1 (lower is better)
Translates to: PEPCASPETPGLRQT*SDGCPVLGRPSSGP
Trigger: CGGGCCAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGGTCTGTCTCAGGCCTGGGGTTTCCGGGGAGGCACAAGGCTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR GCA 90 bp CCTCCCAGCTCGCTCCTGCGGCCAAAGGCCAGCTGTCAGGTGCTATaGGGGGTCACCAGCAGAGTGCCCGCTGGCAGGTGGGGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: PPSSLLRPKASCQVL*GVTSRVPAGRWGLP
Trigger: GGGAAGCCCCCACCTGCCAGCGGGCACTCTGCTGGTGACCCCGCATAGCACCTGACAGCTGGCCTTTGGCCGCAGGAGCGAGCTGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CCCCCATGCCAGGGCTGGGCTGGACGCTCTGCCACGCTGTGTCCCTaGGTGTGGGCCTGGCCTGGTGGGGGAGCCACCAAACTGGTGTGT +
Preference number: 1 (lower is better)
Translates to: PPCQGWAGRSATLCP*VWAWPGGGATKLVC
Trigger: ACACACCAGTTTGGTGGCTCCCCCACCAGGCCAGGCCCACACCCAGGGACACAGCGTGGCAGAGCGTCCAGCCCAGCCCTGGCATGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCATGCCAGGGCTaGGCTGGACGCTCTGCCACGCTGTGTCCCTGGGTGTGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: AVSLTCLLWMPPCQG*AGRSATLCPWVWAW
Trigger: CCAGGCCCACACCCAGGGACACAGCGTGGCAGAGCGTCCAGCCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GGCCCCAGCCCTCCTCCTTACCCAACCTCCCATCCAGAACCTTGCTaGCAGGGCCTCCCAGCTCGCTCCTGCGGCCAAAGGCCAGCTGTC +
Preference number: 1 (lower is better)
Translates to: GPSPPPYPTSHPEPC*QGLPARSCGQRPAV
Trigger: GACAGCTGGCCTTTGGCCGCAGGAGCGAGCTGGGAGGCCCTGGCAGCAAGGTTCTGGATGGGAGGTTGGGTAAGGAGGAGGGCTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GTGAGGAGACAGAGCCCAGGCCTCTGCATTCTGAGGCCAGCGCCCTaGCCGCCCAACAGCTCCCCCACACATGACGCAGGCCCTCCTCAG +
Preference number: 1 (lower is better)
Translates to: VRRQSPGLCILRPAP*PPNSSPTHDAGPPQ
Trigger: CTGAGGAGGGCCTGCGTCATGTGTGGGGGAGCTGTTGGGCGGGCAGGGCGCTGGCCTCAGAATGCAGAGGCCTGGGCTCTGTCTCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp TCCATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTaGATGCCCCCATGCCAGGGCTGGGCTGGACGCTCTGCCACGCTG +
Preference number: 1 (lower is better)
Translates to: SICSPAGAVSLTCLL*MPPCQGWAGRSATL
Trigger: CAGCGTGGCAGAGCGTCCAGCCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGATGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp TGGCCAGCGGAGGGTGCAGGGAAGCCCAGCTGTGCTCAACTCTCCTaGCTCCGCCTTCCACCCTGGGCCCAGGGACAGACAGACATTGCC +
Preference number: 1 (lower is better)
Translates to: WPAEGAGKPSCAQLS*LRLPPWAQGQTDIA
Trigger: GGCAATGTCTGTCTGTCCCTGGGCCCAGGGTGGAAGGCGGAGGCAGGAGAGTTGAGCACAGCTGGGCTTCCCTGCACCCTCCGCTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CCATGGGTGTCCATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTaGCTTCTCTGGATGCCCCCATGCCAGGGCTGGGCTGGACGCTCT +
Preference number: 1 (lower is better)
Translates to: PWVSICSPAGAVSLT*LLWMPPCQGWAGRS
Trigger: AGAGCGTCCAGCCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGATGGACACCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GCCAGGGTGTCCAGGAGCAGGCCCTCTGCCCTCATAGGGGGCCCTTaGCCACACCTTCCAATCGCCTACACCTGTGTCTGGGCGGGTCCT +
Preference number: 1 (lower is better)
Translates to: ARVSRSRPSALIGGP*PHLPIAYTCVWAGP
Trigger: AGGACCCGCCCAGACACAGGTGTAGGCGATTGGAAGGTGTGGGCAAGGGCCCCCTATGAGGGCAGAGGGCCTGCTCCTGGACACCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CCCAGGGCCACTCCTTGCCCTGAGCCACCAGGAACCAGGCAAGGGTaGGGGCACAGGGGGTGGGAAGAGGCTCACAAACCTGCCAGTGTC +
Preference number: 1 (lower is better)
Translates to: PRATPCPEPPGTRQG*GHRGWEEAHKPASV
Trigger: GACACTGGCAGGTTTGTGAGCCTCTTCCCACCCCCTGTGCCCCCACCCTTGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR TCA 90 bp TGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCG +
Preference number: 1 (lower is better)
Translates to: CQCLGAMPRPGLSVL*AHRRSCRMGHAGPP
Trigger: CGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR TCA 90 bp GGCCGGGAGCACGGGGATGGGAGCGCCCGCACCCTGGCTGGAAGATaGACTTCCCGTAAGCACGTAATTCCCTGCAGGTCCGGCAGCTAC +
Preference number: 1 (lower is better)
Translates to: GREHGDGSARTLAGR*TSRKHVIPCRSGSY
Trigger: GTAGCTGCCGGACCTGCAGGGAATTACGTGCTTACGGGAAGTTCATCTTCCAGCCAGGGTGCGGGCGCTCCCATCCCCGTGCTCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CCAGCTTCAGGTCCTCTCTTGGACTCGGCGTCCGAGTCAGACACGTaGGTGATGGAGAAGCGGGACGTGGGCGCGGGCGACACCGTGAAG +
Preference number: 1 (lower is better)
Translates to: PASGPLLDSASESDT*VMEKRDVGAGDTVK
Trigger: CTTCACGGTGTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGTGTCTGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR GCA 90 bp GCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCTaGAGCCCGGGCCTTTCCCGCCTGACTCGCAGCGCCAGCTTGGGC +
Preference number: 1 (lower is better)
Translates to: AGRFNYSQRVTPASS*SPGLSRLTRSASLG
Trigger: GCCCAAGCTGGCGCTGCGAGTCAGGCGGGAAAGGCCCGGGCTGCAGCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCACCATCCTCGCTGCTGCCTGGCAGG +
Preference number: 1 (lower is better)
Translates to: VGQRHLNLLPTATRT*SPPSRSPSSLLPGR
Trigger: CCTGCCAGGCAGCAGCGAGGATGGTGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 90 bp GGGCTGCCCAGGGCTGAGGGGCCGCCTCTTGAGGGTACACGCCTCTaGTCACATGGCCATGGAGCCTTGGGTACCCCTGAGTTAAGGGAG +
Preference number: 1 (lower is better)
Translates to: GLPRAEGPPLEGTRL*SHGHGALGTPELRE
Trigger: CTCCCTTAACTCAGGGGTACCCAAGGCTCCATGGCCATGTGACCAGAGGCGTGTACCCTCAAGAGGCGGCCCCTCAGCCCTGGGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CGTGGCAATCGCTGCCCAGGGCCATGTCCTGCAGGAGGTGGGGCCTaGCACGTGTCCTCCGGCAGGGACCAATGTCTGTGGCTAACGTGT +
Preference number: 1 (lower is better)
Translates to: RGNRCPGPCPAGGGA*HVSSGRDQCLWLTC
Trigger: ACACGTTAGCCACAGACATTGGTCCCTGCCGGAGGACACGTGCCAGGCCCCACCTCCTGCAGGACATGGCCCTGGGCAGCGATTGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GGTAGTTCGTGGCAATCGCTGCCCAGGGCCATGTCCTGCAGGAGGTaGGGCCTGGCACGTGTCCTCCGGCAGGGACCAATGTCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: GSSWQSLPRAMSCRR*GLARVLRQGPMSVA
Trigger: AGCCACAGACATTGGTCCCTGCCGGAGGACACGTGCCAGGCCCCACCTCCTGCAGGACATGGCCCTGGGCAGCGATTGCCACGAACTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp TCATCCCACGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCACCAGGACGTGGTCCCCACCTTCTC +
Preference number: 1 (lower is better)
Translates to: SSHGLLQDTAWGRGT*ICCQQPPGRGPHLL
Trigger: GAGAAGGTGGGGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCGTGGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR GCA 90 bp CTGGGTGTGGGCCTGGCCTGGTGGGGGAGCCACCAAACTGGTGTGTaGCCGGTTCAGGCCTGTCTTGAATCCCCAGCCTCAGTGGTGATG +
Preference number: 1 (lower is better)
Translates to: LGVGLAWWGSHQTGV*PVQACLESPASVVM
Trigger: CATCACCACTGAGGCTGGGGATTCAAGACAGGCCTGAACCGGGCACACACCAGTTTGGTGGCTCCCCCACCAGGCCAGGCCCACACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CTGGAGAGGTGCTGGTGGTGTCATTGGGTAGTTCGTGGCAATCGCTaGCCAGGGCCATGTCCTGCAGGAGGTGGGGCCTGGCACGTGTCC +
Preference number: 1 (lower is better)
Translates to: LERCWWCHWVVRGNR*PGPCPAGGGAWHVS
Trigger: GGACACGTGCCAGGCCCCACCTCCTGCAGGACATGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CTCAAAGATGAGGCTGGCACAGCCTCTGTCAGGGACCACGTCCCTTaGAGGGCAGAGACCCTGGGTAGCAGTGCCGGTGGGGCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: LKDEAGTASVRDHVP*RAETLGSSAGGAVV
Trigger: CACCACTGCCCCACCGGCACTGCTACCCAGGGTCTCTGCCCTCCAAGGGACGTGGTCCCTGACAGAGGCTGTGCCAGCCTCATCTTTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp TGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTTaGGTCTGGCCTGGACTGGATCCCAGCTGTTCTAGGCAGGGCCGG +
Preference number: 1 (lower is better)
Translates to: CVENIQAPAAWSCPT*VWPGLDPSCSRQGR
Trigger: CCGGCCCTGCCTAGAACAGCTGGGATCCAGTCCAGGCCAGACTCAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp AGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGGGCAGACATCAGTaGTGGAGGTGGAATCCTCACCAGCGGGCCCCTAGGCAGCCCCTA +
Preference number: 1 (lower is better)
Translates to: SGSSLAGRQGMGRHQ*WRWNPHQRAPRQPL
Trigger: TAGGGGCTGCCTAGGGGCCCGCTGGTGAGGATTCCACCTCCATCACTGATGTCTGCCCATGCCCTGTCTGCCTGCCAGGCTAGACCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp ATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTaGGTCTTTGCCGTGGGGGCCCCGCCTTGTGCCCACCTCTGCCAG +
Preference number: 1 (lower is better)
Translates to: IYCTSWVWTSFRFPA*VFAVGAPPCAHLCQ
Trigger: CTGGCAGAGGTGGGCACAAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CCAGCCAGCCCCATTTCTAATCTCCCCAGAGCTCCCTCCGGACCCTaGGCCTGCGGAGGAACTCGGGCCACAGAGCACTTCCTTAGGAGT +
Preference number: 1 (lower is better)
Translates to: PASPISNLPRAPSGP*ACGGTRATEHFLRS
Trigger: ACTCCTAAGGAAGTGCTCTGTGGCCCGAGTTCCTCCGCAGGCCCAGGGTCCGGAGGGAGCTCTGGGGAGATTAGAAATGGGGCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CAGCATTTGCAGCCCCAGCCCCAGGGTCCTCAGAGCCACCCAGTGTaGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGAC +
Preference number: 1 (lower is better)
Translates to: QHLQPQPQGPQSHPV*MVQHAPPGPTVLGD
Trigger: GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTGGCTCTGAGGACCCTGGGGCTGGGGCTGCAAATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GGAGGTGGGGCCTGGCACGTGTCCTCCGGCAGGGACCAATGTCTGTaGCTAACGTGTGGTGACCTTGCAGTGGCCTTGGGCTGCAGACTT +
Preference number: 1 (lower is better)
Translates to: GGGAWHVSSGRDQCL*LTCGDLAVALGCRL
Trigger: AAGTCTGCAGCCCAAGGCCACTGCAAGGTCACCACACGTTAGCCACAGACATTGGTCCCTGCCGGAGGACACGTGCCAGGCCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CCTTTGCTGGCTGGAGAGGTGCTGGTGGTGTCATTGGGTAGTTCGTaGCAATCGCTGCCCAGGGCCATGTCCTGCAGGAGGTGGGGCCTG +
Preference number: 1 (lower is better)
Translates to: PLLAGEVLVVSLGSS*QSLPRAMSCRRWGL
Trigger: CAGGCCCCACCTCCTGCAGGACATGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp ACCCTGGGGAGCTCCATAGGCACTGGAGCCAGGTGTTGGGCCCACTaGGGACCGGGCTGTGCTGTTAGTCTGACCTTGCCTCTTCTGTCC +
Preference number: 1 (lower is better)
Translates to: TLGSSIGTGARCWAH*GPGCAVSLTLPLLS
Trigger: GGACAGAAGAGGCAAGGTCAGACTAACAGCACAGCCCGGTCCCCAGTGGGCCCAACACCTGGCTCCAGTGCCTATGGAGCTCCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp GCCACTGACTTTCTGATGAGAATCGGCTGTGATTCGGGGCAGGAGTaGGAACCACGCGGCTGCACTGCCCTCGGCTGTGGTCTGGGCCAG +
Preference number: 1 (lower is better)
Translates to: ATDFLMRIGCDSGQE*EPRGCTALGCGLGQ
Trigger: CTGGCCCAGACCACAGCCGAGGGCAGTGCAGCCGCGTGGTTCTCACTCCTGCCCCGAATCACAGCCGATTCTCATCAGAAAGTCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CTTTGCCCACGTCCAGCTGAAGCCGACAGTGACCAACGACAGGTCTaGCCCCCTCCTCAGCTGATGGCCACATCTGCAGTGCTGCCCATC +
Preference number: 1 (lower is better)
Translates to: LCPRPAEADSDQRQV*PPPQLMATSAVLPI
Trigger: GATGGGCAGCACTGCAGATGTGGCCATCAGCTGAGGAGGGGGGCAGACCTGTCGTTGGTCACTGTCGGCTTCAGCTGGACGTGGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CCCTGCTGCGTCTTCATGTCCACGTGCCATCTGTGCTGTCACCCTTaGAGCTGCCTGACATCCCCCATCCTGTCCTGTGCTGTCCCCTCC +
Preference number: 1 (lower is better)
Translates to: PCCVFMSTCHLCCHP*SCLTSPILSCAVPS
Trigger: GGAGGGGACAGCACAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp ACAGGCCTGCACCAGTGGAGGGCTTCCTACCCCTGCAGCTCCCCGTaGGGTCCAGGCAAGCGATGTGCCTTTGCCACTGACTTTCTGATG +
Preference number: 1 (lower is better)
Translates to: TGLHQWRASYPCSSP*GPGKRCAFATDFLM
Trigger: CATCAGAAAGTCAGTGGCAAAGGCACATCGCTTGCCTGGACCCCACGGGGAGCTGCAGGGGTAGGAAGCCCTCCACTGGTGCAGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CTGGCCGCTGTCCATACTCGTCAGCGGAGGCCCAAGCGCCCACGCTaGACCCGATTCCAGAAGGGCCCACCTTCTGAAGACACGAAGAAA +
Preference number: 1 (lower is better)
Translates to: LAAVHTRQRRPKRPR*TRFQKGPPSEDTKK
Trigger: TTTCTTCGTGTCTTCAGAAGGTGGGCCCTTCTGGAATCGGGTCCAGCGTGGGCGCTTGGGCCTCCGCTGACGAGTATGGACAGCGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CACTCCACAGTGCCAGGGGCCAGTTTCCCGGCCACGCAGTCTGCCTaGTCTGACAACTCAGCTGGGATTGGGGGTGTCGAAAGCCACTTG +
Preference number: 1 (lower is better)
Translates to: HSTVPGASFPATQSA*SDNSAGIGGVESHL
Trigger: CAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTCAGACCAGGCAGACTGCGTGGCCGGGAAACTGGCCCCTGGCACTGTGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp TGCTGCTTCTCCTGCCTAATAAACAGGCTTCTCCTGCACCAGGTGTaGTCTGTCCGCCCAAGGGCCAGAAGGCCGGGAGCACGGGGATGG +
Preference number: 1 (lower is better)
Translates to: CCFSCLINRLLLHQV*SVRPRARRPGARGW
Trigger: CCATCCCCGTGCTCCCGGCCTTCTGGCCCTTGGGCGGACAGATCACACCTGGTGCAGGAGAAGCCTGTTTATTAGGCAGGAGAAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp CACAGTGCCAGGGGCCAGTTTCCCGGCCACGCAGTCTGCCTGGTCTaGCAACTCAGCTGGGATTGGGGGTGTCGAAAGCCACTTGCAGTT +
Preference number: 1 (lower is better)
Translates to: HSARGQFPGHAVCLV*QLSWDWGCRKPLAV
Trigger: AACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTCAGACCAGGCAGACTGCGTGGCCGGGAAACTGGCCCCTGGCACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp GCTGAGGGGGCTGAACTGCCCTTACCTGGTGAGGCTTGGAAGGGGTaGAGGCTCAAAGATGAGGCTGGCACAGCCTCTGTCAGGGACCAC +
Preference number: 1 (lower is better)
Translates to: AEGAELPLPGEAWKG*RLKDEAGTASVRDH
Trigger: GTGGTCCCTGACAGAGGCTGTGCCAGCCTCATCTTTGAGCCTTCACCCCTTCCAAGCCTCACCAGGTAAGGGCAGTTCAGCCCCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp GTGTGGATCTGCAGACCTGGAGGGCTGCTGGGTCCAGGTTTGAGCTaGCGCTCACTCCGGGGACCACAGGGCCATTATGGGTCCAATTCC +
Preference number: 1 (lower is better)
Translates to: VWICRPGGLLGPGLS*RSLRGPQGHYGSNS
Trigger: GGAATTGGACCCATAATGGCCCTGTGGTCCCCGGAGTGAGCGTCAGCTCAAACCTGGACCCAGCAGCCCTCCAGGTCTGCAGATCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp CCTCCTCTGCACCCCCGAGTCCTCAGACCCCATGCTGCCTCCAACTaGGCCTTGTGTTTCCTTGCAGCGCCGATGTGGAAGTGGCCAGAT +
Preference number: 1 (lower is better)
Translates to: PPLHPRVLRPHAASN*ALCFLAAPMWKWPD
Trigger: ATCTGGCCACTTCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTCTGAGGACTCGGGGGTGCAGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CTGCCTTGTCTAGGGCACATAGTGGACTTGGGGGTCAGGCAGCCTTaGAGACAGCGCCTGGTCCTCCCTGCCCCGCAAAGCAGCGTATAT +
Preference number: 1 (lower is better)
Translates to: LPCLGHIVDLGVRQP*RQRLVLPAPQSSVY
Trigger: ATATACGCTGCTTTGCGGGGCAGGGAGGACCAGGCGCTGTCTGCAAGGCTGCCTGACCCCCAAGTCCACTATGTGCCCTAGACAAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GCACAGTCCCGTCCCTGCTGCGTCTTCATGTCCACGTGCCATCTGTaGTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGT +
Preference number: 1 (lower is better)
Translates to: AQSRPCCVFMSTCHL*CHPWSCLTSPILSC
Trigger: ACAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp AAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCTGCCGGATGGG +
Preference number: 1 (lower is better)
Translates to: KRLTNLPVSRGHASS*FKCPVSTPEELPDG
Trigger: CCCATCCGGCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 90 bp CCCCCTCCTCAGCTGATGGCCACATCTGCAGTGCTGCCCATCTGGTaGCTTCCCCCGCCCTTCCCATGTAGCCTGTTCTGTCATCATCTG +
Preference number: 1 (lower is better)
Translates to: PPPQLMATSAVLPIW*LPPPFPCSLFCHHL
Trigger: CAGATGATGACAGAACAGGCTACATGGGAAGGGCGGGGGAAGCCACCAGATGGGCAGCACTGCAGATGTGGCCATCAGCTGAGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GCTCCTGAACTTTGGGGACTGGATGGAGATGCTCTGGGTTGGCCCTaGCCACCACCTTGCCTTCCGCCTCCATCTTCCTCCCTTCCGAGA +
Preference number: 1 (lower is better)
Translates to: APELWGLDGDALGWP*PPPCLPPPSSSLPR
Trigger: TCTCGGAAGGGAGGAAGATGGAGGCGGAAGGCAAGGTGGTGGCCAGGGCCAACCCAGAGCATCTCCATCCAGTCCCCAAAGTTCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CTCTGGGTGCTGGGCCTTCTCTACTGGGTCCCCTCCTTGGGTTCATaGTATCTTTCTCCCCTCCCGGAAGCTTGTGGGCTCTGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: LWVLGLLYWVPSLGS*YLSPLPEACGLWLA
Trigger: AGCCAGCCAGAGCCCACAAGCTTCCGGGAGGGGAGAAAGATACCATGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAGCACCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GTCATCATCTGTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTaGCTGGTCTTGCCCCACTTGAGTCTGGCCTGGACTGGATCCCAG +
Preference number: 1 (lower is better)
Translates to: VIICAFLCREHPGPG*LVLPHLSLAWTGSQ
Trigger: CTGGGATCCAGTCCAGGCCAGACTCAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCACAGATGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp TTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGTCCACGTaGCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATC +
Preference number: 1 (lower is better)
Translates to: FARAQSRPCCVFMST*HLCCHPWSCLTSPI
Trigger: GATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CCAGAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTaGGTCTTCATGTCCACGTGCCATCTGTGCTGTCACCCTTGGAGC +
Preference number: 1 (lower is better)
Translates to: PESKHSFARAQSRPC*VFMSTCHLCCHPWS
Trigger: GCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GCTCCAGAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTaGTGCGTCTTCATGTCCACGTGCCATCTGTGCTGTCACCCTTGG +
Preference number: 1 (lower is better)
Translates to: APESKHSFARAQSRP*CVFMSTCHLCCHPW
Trigger: CCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CCCTTCCATCCCCAAGTTGCTAGGAGGGCGGCTCTGCAAAGCCAGTaGCTGCATCCTTCACAAAGGACGTTGGTCCCTGTGTCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: PFHPQVARRAALQSQ*LHPSQRTLVPVSPW
Trigger: CCAGGGAGACACAGGGACCAACGTCCTTTGTGAAGGATGCAGGCACTGGCTTTGCAGAGCCGCCCTCCTAGCAACTTGGGGATGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GCTTCCCACCACCCTTCCATCCCCAAGTTGCTAGGAGGGCGGCTCTaGAAAGCCAGTGCCTGCATCCTTCACAAAGGACGTTGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: ASHHPSIPKLLGGRL*KASACILHKGRWSL
Trigger: CAGGGACCAACGTCCTTTGTGAAGGATGCAGGCACTGGCTTTGCAGAGCCGCCCTCCTAGCAACTTGGGGATGGAAGGGTGGTGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp TGGTGTATATTTGGGATGTGCCAGGGTGTCCAGGAGCAGGCCCTCTaGCCTCATAGGGGGCCCTTGCCCACACCTTCCAATCGCCTACAC +
Preference number: 1 (lower is better)
Translates to: WCIFGMCQGVQEQAL*PHRGPLPTPSNRLH
Trigger: GTGTAGGCGATTGGAAGGTGTGGGCAAGGGCCCCCTATGAGGGCAGAGGGCCTGCTCCTGGACACCCTGGCACATCCCAAATATACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GGTCTGAGTCCATTTCCTCACGGGTTGAGTGGGCCACTCCCCTGGTaGCTGGTGTATATTTGGGATGTGCCAGGGTGTCCAGGAGCAGGC +
Preference number: 1 (lower is better)
Translates to: GLSPFPHGLSGPLPW*LVYIWDVPGCPGAG
Trigger: GCCTGCTCCTGGACACCCTGGCACATCCCAAATATACACCAGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATGGACTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GAGGAACTCGGGCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTaGCAGGCAGACAGGGCATGGGCAGACATCAGTGATGGAGGTGGA +
Preference number: 1 (lower is better)
Translates to: EELGPQSTSLGVGLA*QADRAWADISDGGG
Trigger: TCCACCTCCATCACTGATGTCTGCCCATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGCCCGAGTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CCGGGTCTGAGTCCATTTCCTCACGGGTTGAGTGGGCCACTCCCCTaGTGCCTGGTGTATATTTGGGATGTGCCAGGGTGTCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: PGLSPFPHGLSGPLP*CLVYIWDVPGCPGA
Trigger: TGCTCCTGGACACCCTGGCACATCCCAAATATACACCAGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATGGACTCAGACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GGGACTCTGGAGTCCGGGTCTGAGTCCATTTCCTCACGGGTTGAGTaGGCCACTCCCCTGGTGCCTGGTGTATATTTGGGATGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: GTLESGSESISSRVE*ATPLVPGVYLGCAR
Trigger: CCTGGCACATCCCAAATATACACCAGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATGGACTCAGACCCGGACTCCAGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp TCCGGGGACCACAGGGCCATTATGGGTCCAATTCCAGTGGGACTCTaGAGTCCGGGTCTGAGTCCATTTCCTCACGGGTTGAGTGGGCCA +
Preference number: 1 (lower is better)
Translates to: SGDHRAIMGPIPVGL*SPGLSPFPHGLSGP
Trigger: TGGCCCACTCAACCCGTGAGGAAATGGACTCAGACCCGGACTCCAGAGTCCCACTGGAATTGGACCCATAATGGCCCTGTGGTCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GCCTCTCACTCTGGGTGCTGGGCCTTCTCTACTGGGTCCCCTCCTTaGGTTCATGGTATCTTTCTCCCCTCCCGGAAGCTTGTGGGCTCT +
Preference number: 1 (lower is better)
Translates to: ASHSGCWAFSTGSPP*VHGIFLPSRKLVGS
Trigger: AGAGCCCACAAGCTTCCGGGAGGGGAGAAAGATACCATGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAGCACCCAGAGTGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp CCCGATTCCAGAAGGGCCCACCTTCTGAAGACACGAAGAAACAGCTaGCGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: PDSRRAHLLKTRRNS*REKTENRCCPPGSG
Trigger: CCCAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTCGTGTCTTCAGAAGGTGGGCCCTTCTGGAATCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CGCTCTTGGACACGTCTGGTGACTTTCCTTTGCTGGCTGGAGAGGTaGTGGTGGTGTCATTGGGTAGTTCGTGGCAATCGCTGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: RSWTRLVTFLCWLER*WWCHWVVRGNRCPG
Trigger: CCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CTGGTGACTTTCCTTTGCTGGCTGGAGAGGTGCTGGTGGTGTCATTaGGTAGTTCGTGGCAATCGCTGCCCAGGGCCATGTCCTGCAGGA +
Preference number: 1 (lower is better)
Translates to: LVTFLCWLERCWWCH*VVRGNRCPGPCPAG
Trigger: TCCTGCAGGACATGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp GGAGCAGCCTGTTCCCTGTGGGAAGGGTGGGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCA +
Preference number: 1 (lower is better)
Translates to: GAACSLWEGWAYGSS*VSEGETATDFEIRA
Trigger: TGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACAGGGAACAGGCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR TCA 90 bp GCCCAAGCGCCCACGCTGGACCCGATTCCAGAAGGGCCCACCTTCTaGAGACACGAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGT +
Preference number: 1 (lower is better)
Translates to: AQAPTLDPIPEGPTF*RHEETADARRQKTG
Trigger: ACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTCGTGTCTTCAGAAGGTGGGCCCTTCTGGAATCGGGTCCAGCGTGGGCGCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GGTGATTCTGCTCCAGGTAATGGCTCCAGAGTCCAAGCACAGCTTTaGCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGTCCACGTG +
Preference number: 1 (lower is better)
Translates to: GDSAPGNGSRVQAQL*QSTVPSLLRLHVHV
Trigger: CACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTCTGGAGCCATTACCTGGAGCAGAATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp TCTTGGACACGTCTGGTGACTTTCCTTTGCTGGCTGGAGAGGTGCTaGTGGTGTCATTGGGTAGTTCGTGGCAATCGCTGCCCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: SWTRLVTFLCWLERC*WCHWVVRGNRCPGP
Trigger: TGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTaGGTCTGGAGTCACCCAACTGGTCGAAATGCATTTGTGACGGCT +
Preference number: 1 (lower is better)
Translates to: QLTREDRKQVLSARL*VWSHPTGRNAFVTA
Trigger: AGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GCTGTCCGCCCGGCTCTGGGTCTGGAGTCACCCAACTGGTCGAAATaGATTTGTGACGGCTCCGTTTCTTCTCGGAATCCTTCTGCTTCA +
Preference number: 1 (lower is better)
Translates to: AVRPALGLESPNWSK*ICDGSVSSRNPSAS
Trigger: TGAAGCAGAAGGATTCCGAGAAGAAACGGAGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CCTGGTCTGACAACTCAGCTGGGATTGGGGGTGTCGAAAGCCACTTaGAGTTGGCCAAGAGACTCCCCAATCCCATTGCCACCCTGTCAT +
Preference number: 1 (lower is better)
Translates to: PGLTTQLGLGVSKAT*SWPRDSPIPLPPCH
Trigger: ATGACAGGGTGGCAATGGGATTGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTCAGACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp CTCAGGGTCCTCCGCTCTTGGACACGTCTGGTGACTTTCCTTTGCTaGCTGGAGAGGTGCTGGTGGTGTCATTGGGTAGTTCGTGGCAAT +
Preference number: 1 (lower is better)
Translates to: LRVLRSWTRLVTFLC*LERCWWCHWVVRGN
Trigger: ATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGAGCGGAGGACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp ACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGGGTCTaGAGTCACCCAACTGGTCGAAATGCATTTGTGACGGCTCCGTTT +
Preference number: 1 (lower is better)
Translates to: TREDRKQVLSARLWV*SHPTGRNAFVTAPF
Trigger: AAACGGAGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp AAAAATGCTCCTGAACTTTGGGGACTGGATGGAGATGCTCTGGGTTaGCCCTGGCCACCACCTTGCCTTCCGCCTCCATCTTCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: KNAPELWGLDGDALG*PWPPPCLPPPSSSL
Trigger: AAGGGAGGAAGATGGAGGCGGAAGGCAAGGTGGTGGCCAGGGCCAACCCAGAGCATCTCCATCCAGTCCCCAAAGTTCAGGAGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp AAAACAGGTGCTGTCCGCCCGGCTCTGGGTCTGGAGTCACCCAACTaGTCGAAATGCATTTGTGACGGCTCCGTTTCTTCTCGGAATCCT +
Preference number: 1 (lower is better)
Translates to: KTGAVRPALGLESPN*SKCICDGSVSSRNP
Trigger: AGGATTCCGAGAAGAAACGGAGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAGCACCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp GCACGTGTCCTCCGGCAGGGACCAATGTCTGTGGCTAACGTGTGGTaGCCTTGCAGTGGCCTTGGGCTGCAGACTTTGTCATATTCTATT +
Preference number: 1 (lower is better)
Translates to: ARVLRQGPMSVANVW*PCSGLGLQTLSYSI
Trigger: AATAGAATATGACAAAGTCTGCAGCCCAAGGCCACTGCAAGGTCACCACACGTTAGCCACAGACATTGGTCCCTGCCGGAGGACACGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp CCCGGCTCTGGGTCTGGAGTCACCCAACTGGTCGAAATGCATTTGTaGCGGCTCCGTTTCTTCTCGGAATCCTTCTGCTTCACATTCAAG +
Preference number: 1 (lower is better)
Translates to: PGSGSGVTQLVEMHL*RLRFFSESFCFTFK
Trigger: CTTGAATGTGAAGCAGAAGGATTCCGAGAAGAAACGGAGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp GATCCTTTCAGCAGGGTGCCAATGCTTAGACGCCATCTGGGAGTCTaGGAGCCTTCCGCAGACCTGTCAGTCTCTTCCACGTACTTTATT +
Preference number: 1 (lower is better)
Translates to: DPFSRVPMLRRHLGV*EPSADLSVSSTYFI
Trigger: AATAAAGTACGTGGAAGAGACTGACAGGTCTGCGGAAGGCTCCCAGACTCCCAGATGGCGTCTAAGCATTGGCACCCTGCTGAAAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 90 bp ACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTaGGAGACAAGAAGAGAAAAATGCAGGTTAGAGAACAGGCCTGCA +
Preference number: 1 (lower is better)
Translates to: TQCGWFSTLHLVPLF*ETRREKCRLENRPA
Trigger: TGCAGGCCTGTTCTCTAACCTGCATTTTTCTCTTCTTGTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp CAATGTCTGTGGCTAACGTGTGGTGACCTTGCAGTGGCCTTGGGCTaGAGACTTTGTCATATTCTATTGGCTCAGTTAGGCCCCCACTCA +
Preference number: 1 (lower is better)
Translates to: QCLWLTCGDLAVALG*RLCHILLAQLGPHS
Trigger: TGAGTGGGGGCCTAACTGAGCCAATAGAATATGACAAAGTCTGCAGCCCAAGGCCACTGCAAGGTCACCACACGTTAGCCACAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 90 bp GGGTGGGGACTCCAAAGAGAAAGGCTCAGGCATCCCTCTCATCCGTaGTCATCTTGTTCCATTTCAACTTCTTGTCTTGAGTCGTATTTG +
Preference number: 1 (lower is better)
Translates to: GWGLQRERLRHPSHP*SSCSISTSCLESYL
Trigger: CAAATACGACTCAAGACAAGAAGTTGAAATGGAACAAGATGAGCACGGATGAGAGGGATGCCTGAGCCTTTCTCTTTGGAGTCCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 90 bp ACAGGCAGATCATGGATCTGTCTTCTTTCACTGCCTTTCTGTTGTTaGTTTTCGGCAACAAATTCTGGAAGATTAGGTAGAAAAATGCTC +
Preference number: 1 (lower is better)
Translates to: TGRSWICLLSLPFCC*FSATNSGRLGRKML
Trigger: GAGCATTTTTCTACCTAATCTTCCAGAATTTGTTGCCGAAAATCAACAACAGAAAGGCAGTGAAAGAAGACAGATCCATGATCTGCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp GCCGGGGCGGGTGCGGCCGGGTCTAGGGCCATGGCGAAGGCTGCCTaGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCA +
Preference number: 2 (lower is better)
Translates to: AGAGAAGSRAMAKAA*AVISGKSSSHANPP
Trigger: TGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCACCCGCCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCACCTGCTCAGACGGCTaGCCAGTGCTCGGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGTCSDG*PVLGRP
Trigger: GGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGGT...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR CCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCTGGCCAGCTGGTGGCTaGGAGGGGAGCCTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLWPAGG*EGSLAA
Trigger: GGCAGCCAGGCTCCCCTCCCAGCCACCAGCTGGCCA...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGGGCCACTCCTTGCCCTaGGCCACCAGGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQGHSLP*ATRNQA
Trigger: TGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCC...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGTCCGCAGGTAGCCCTTaGGGTCCCCAGCTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPSAGSP*GPQLRD
Trigger: GTCCCTCAGCTGGGGACCTCAAGGGCTACCTGCGGA...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR-3UTR GCA 90 bp AGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGGGCTCCCCCAGCCCAGACGAATTCTaGCTCTGGGGCGGAGCATGG +
Preference number: 2 (lower is better)
Translates to: SHQPAAAGWGRWESRGSPSPDEF*LWGGAW
Trigger: CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCT...GGGGGAGCCCCGGCTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCTGCCGGATGGGGCATaGGGGTCCTCCGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSLPDGA*GSSEAR
Trigger: CCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCTGAGGGACAGCAGCTaGCCAGAGCAGCCTCGTGCC +
Preference number: 2 (lower is better)
Translates to: HALQGPGVGSHGLRHPAALRDSS*PEQPRA
Trigger: GGCACGAGGCTGCTCTGGGCAGCTGCTGTCCCTCAG...AGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR-3UTR CCA 90 bp GCGGGCGACACCGTGAAGCGCGAGAAGGGAGCGGGCGTGGGCGTGGGCGCAGCCGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATC +
Preference number: 2 (lower is better)
Translates to: AGDTVKREKGAGVGVGAADEFCL*GGAWPI
Trigger: GATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC...GGCTGCGCCCACGCCCACGCCCGCTCCCTTCTCGCGCTTCACGGTGTCGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CGGGTGCGGCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 2 (lower is better)
Translates to: RVRPGLGPWRRLPWPSSAGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...CGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCACCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGATGCCAGGGCTGGGCTaGACGCTCTGCCACGCTGTG +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAMPGLG*TLCHAV
Trigger: CACAGCGTGGCAGAGCGTCCAGCCCAGCCCTGGCAT...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGCCCAAGCGCCCACGCTaGACCCGATTCCAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAPKRPR*TRFQKG
Trigger: GCCCTTCTGGAATCGGGTCCAGCGTGGGCGCTTGGG...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGCGTGTCCCCCAGGGCTaGGCTGGACTGAAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPRVPQG*AGLKAS
Trigger: GGAAGCCTTCAGTCCAGCCCAGCCCTGGGGGACACG...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR-3UTR TCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGGGTCCAGGTTTGAGCTaGCGCTCACTCCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAGPGLS*RSLRGP
Trigger: TGGTCCCCGGAGTGAGCGTCAGCTCAAACCTGGACC...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTGTCTGGCCCAGGGGATaGCCAGCTGCTCTGCAGGGC +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAVWPRG*PAALQG
Trigger: GCCCTGCAGAGCAGCTGGCCATCCCCTGGGCCAGAC...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGGCCCGGCTCTGGGTCTaGAGTCACCCAACTGGTCGA +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAARLWV*SHPTGR
Trigger: TCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGC...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGTCGTGCCCTGCACAGTaGCCAGCACCCAGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPSCPAQ*PAPSSS
Trigger: GGAACTGCTGGGTGCTGGCCACTGTGCAGGGCACGA...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR-3UTR TCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTTGTGGGGCCGGCCCTaGCAACAGTCCTGGGGGCCC +
Preference number: 2 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTLWGRP*QQSWGP
Trigger: GGGCCCCCAGGACTGTTGTCAGGGCCGGCCCCACAA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR TCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCAAGGGGGCCTTGGAATaGGAGTGGAGGGGCGAGCGT +
Preference number: 2 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLKGALE*EWRGER
Trigger: ACGCTCGCCCCTCCACTCTCATTCCAAGGCCCCCTT...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCCACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 2 (lower is better)
Translates to: VSDSRLGILSRLRRLRALHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...GAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTCACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 2 (lower is better)
Translates to: GQQAGHLEQAAQVARALAHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...AGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGGCCGTGAGCCTAACCTaGCTTCTCTGGATGCCCCCA +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAAVSLT*LLWMPP
Trigger: TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGC...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCCTGCAGCTCCCCGTaGGGTCCAGGCAAGCGATGT +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAPCSSP*GPGKRC
Trigger: ACATCGCTTGCCTGGACCCCACGGGGAGCTGCAGGG...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTTGTCCCAGCCAGCCTTaGGCTCTGGCCTGCGCTCTC +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSACPSQP*ALACAL
Trigger: GAGAGCGCAGGCCAGAGCCCAAGGCTGGCTGGGACA...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCCCAGCTTTGGGCCCTaGGAAGGGGGCCTTGGAATG +
Preference number: 2 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLPSFGP*EGGLGM
Trigger: CATTCCAAGGCCCCCTTCCCAGGGCCCAAAGCTGGG...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp AGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGGGCTCCCCCAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 2 (lower is better)
Translates to: SHQPAAAGWGRWESRGSPNSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...GGGGGAGCCCCGGCTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCGGATCCAGCAGACCCTaGGGCTCCAGCACGTTGAGA +
Preference number: 2 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLGSSRP*GSSTLR
Trigger: TCTCAACGTGCTGGAGCCTCAGGGTCTGCTGGATCC...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp GTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGGTCAGGGCTGGGCTGGACTaGAGGCTTCCTCTCCACTGC +
Preference number: 2 (lower is better)
Translates to: VGSHGLRHPAAPQVALEVRAGLD*RLPLHC
Trigger: GCAGTGGAGAGGAAGCCTTCAGTCCAGCCCAGCCCT...GACCTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR-3UTR GCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCTGCCCAGCCCACACTaGTGGGAGGGTGATGGATCG +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSALPSPH*WEGDGS
Trigger: CGATCCATCACCCTCCCAGCAGTGTGGGCTGGGCAG...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGACTCCCCAATCCCATTaGCACCCTGTCATGCCCCAG +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQATPQSH*HPVMPQ
Trigger: CTGGGGCATGACAGGGTGGCAATGGGATTGGGGAGT...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCCACCCCTGATCTTTTaGGCTGCCCACCGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSPPLIF*AAHRGH
Trigger: GTGGCCACGGTGGGCAGCCCAAAAGATCAGGGGTGG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCACCCTTCAAGCTGCAGCAGTaGGGGCAGCACCTCCCCGGG +
Preference number: 2 (lower is better)
Translates to: AALAVISGKSSSHANPPPFKLQQ*GQHLPG
Trigger: CCCGGGGAGGTGCTGCCCCCACTGCTGCAGCTTGAA...GGGTGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR CCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAAGGCCGCACCTTGGCTaGGCCTTGGGGCTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTRPHLG*ALGLRR
Trigger: CCTCCGGAGCCCCAAGGCCCAGCCAAGGTGCGGCCT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGCAGAGCCACCCAGTGTaGATGGTTCAGCACGCTCCA +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAQSHPV*MVQHAP
Trigger: TGGAGCGTGCTGAACCATCCACACTGGGTGGCTCTG...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp CGTTCCAGGTCCTCGCAGAAGGTCTCGGACAGCAGGCTGGGCATCTaGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTCTCAGCCACC +
Preference number: 2 (lower is better)
Translates to: RSRSSQKVSDSRLGI*SRLRRLRALWLSAT
Trigger: GGTGGCTGAGAGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTGCGAGGACCTGGAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CAA 90 bp TGCCAGGGTGTCCAGGAGCAGGCCCTCTGCCCTCATAGGGGGCCCTaGCCCACACCTTCCAATCGCCTACACCTGTGTCTGGGCGGGTCC +
Preference number: 2 (lower is better)
Translates to: CQGVQEQALCPHRGP*PTPSNRLHLCLGGS
Trigger: GGACCCGCCCAGACACAGGTGTAGGCGATTGGAAGGTGTGGGCAAGGGCCCCCTATGAGGGCAGAGGGCCTGCTCCTGGACACCCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp CCTGACTCGCAGCGCCAGCTTGGGCTCCTTCGGGTGTGTGTGCCTTaGGGGCTGACAGCCTTGTGGGGACTGGAGGTCAGGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PDSQRQLGLLRVCVP*GLTALWGLEVRVLG
Trigger: CCCCAGGACCCTGACCTCCAGTCCCCACAAGGCTGTCAGCCCCAAAGGCACACACACCCGAAGGAGCCCAAGCTGGCGCTGCGAGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTTGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCA +
Preference number: 2 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSWGRGT*ICCQQP
Trigger: TGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCA...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCTGCCGGATGGGGCATaGGGGTCCTCCGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: DFEIRAAETGPTRAPRATLPDGA*GSSEAR
Trigger: CCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACC +
Preference number: 2 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTPRATP*PEPPGT
Trigger: GGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACC +
Preference number: 2 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSPRATP*PEPPGT
Trigger: GGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCAGAGGGGAGCTGCCTaGACGGTCCTGCCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSQRGAA*TVLPRA
Trigger: TGCCCTTGGCAGGACCGTGCAGGCAGCTCCCCTCTG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCAGACGGCTGCCCAGTaGTCGGCAGGCCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLQTAAQ*SAGPAL
Trigger: CAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCAGCTGTCAGGTGCTATaGGGGGTCACCAGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLSCQVL*GVTSRV
Trigger: CACTCTGCTGGTGACCCCGCATAGCACCTGACAGCT...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGAGGTTGTGGCTGGCCTaGCCCGCCCCACCCCGCCCT +
Preference number: 2 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMRLWLA*PAPPRP
Trigger: AGGGCGGGGTGGGGCGGGGCAGGCCAGCCACAACCT...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 2 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CAGAAGGTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 2 (lower is better)
Translates to: QKVSDSRLGILSRLRRLRGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...GCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCGAGTCTGGCCTGGACTaGATCCCAGCTGTTCTAGGC +
Preference number: 2 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLESGLD*IPAVLG
Trigger: GCCTAGAACAGCTGGGATCCAGTCCAGGCCAGACTC...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTGCTCCCTCCGGACCCTaGGCCTGCGGAGGAACTCGG +
Preference number: 2 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVAAPSGP*ACGGTR
Trigger: CCGAGTTCCTCCGCAGGCCCAGGGTCCGGAGGGAGC...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGCTTTCCTTTGCTGGCTaGAGAGGTGCTGGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQALSFAG*RGAGGV
Trigger: GACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAG...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTTGGATGGAGATGCTCTaGGTTGGCCCTGGCCACCAC +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAWMEML*VGPGHH
Trigger: GTGGTGGCCAGGGCCAACCCAGAGCATCTCCATCCA...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCAGGTGTTGGGCCCACTaGGGACCGGGCTGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPRCWAH*GPGCAV
Trigger: AACAGCACAGCCCGGTCCCCAGTGGGCCCAACACCT...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp GCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCACCCTGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCA +
Preference number: 2 (lower is better)
Translates to: AALAVISGKSSSHANPPPWGRGT*ICCQQP
Trigger: TGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCA...GGGTGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHGLSVL*AHRRSC
Trigger: GCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACACGGAAACCCCAGGCCTaGGACAGACCTGCTCAGACG +
Preference number: 2 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTRKPQA*DRPAQT
Trigger: CGTCTGAGCAGGTCTGTCTCAGGCCTGGGGTTTCCG...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR TCA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGAGAGCTGTTGCCTTCTaGTCTCAGCGGAACCGGGGT +
Preference number: 2 (lower is better)
Translates to: EPFGEPSACCGRLGALGERAVAF*SQRNRG
Trigger: ACCCCGGTTCCGCTGAGATCAGAAGGCAACAGCTCT...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR TCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTTGGTCTTGCCCCACTTaGGTCTGGCCTGGACTGGAT +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAWSCPT*VWPGLD
Trigger: ATCCAGTCCAGGCCAGACTCAAGTGGGGCAAGACCA...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACC +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLPRATP*PEPPGT
Trigger: GGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 2 (lower is better)
Translates to: VSDSRLGILSRLRRLRALTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...GAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCTCTGGGGCGGAGCATaGCCGATCTACCATCCAGGG +
Preference number: 2 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSLWGGA*PIYHPG
Trigger: CCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCTGGGCCTTCTCTACTaGGTCCCCTCCTTGGGTTCA +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSALGLLY*VPSLGS
Trigger: TGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAG...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp GCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTaGCCGTGGGGGCCCCGCCTTGTGCCCACCTCTGCCAGGTATTTT +
Preference number: 2 (lower is better)
Translates to: ARVGYGPPSGSRRAS*PWGPRLVPTSARYF
Trigger: AAAATACCTGGCAGAGGTGGGCACAAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGGCCAGGAGGGCAGTTaGGAGCTGGCCAGCGGAGGG +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSGQEGS*ELASGG
Trigger: CCCTCCGCTGGCCAGCTCTCAACTGCCCTCCTGGCC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACACCTGATCTTTTGGGCTaGCCACCGTGGCCACAGCGG +
Preference number: 2 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTPDLLG*PPWPQR
Trigger: CCGCTGTGGCCACGGTGGGCAGCCCAAAAGATCAGG...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCTGGGCTGGACGCTCTaGCACGCTGTGTCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVALGWTL*HAVSLG
Trigger: ACCCAGGGACACAGCGTGGCAGAGCGTCCAGCCCAG...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTAGCACCACTCCACAGTaGCAGGGGCCAGTTTCCCGG +
Preference number: 2 (lower is better)
Translates to: GEPEPQLCADSECSRVLGSTTPQ*QGPVSR
Trigger: CCGGGAAACTGGCCCCTGGCACTGTGGAGTGGTGCT...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCAGCCTGTTCCCTGTaGGAAGGGTGGGCTTACGGG +
Preference number: 2 (lower is better)
Translates to: RTPRGAEAPESAANSHQDAACSL*EGWAYG
Trigger: CCCGTAAGCCCACCCTTCCCACAGGGAACAGGCTGC...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCGCTGTGGAGCCATTTaGGGAGCCATCAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: LPLGRSMADLPSRASHPTRCGAI*GAISLL
Trigger: CAGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCTCCGCCTTCCACCCTaGGCCCAGGGACAGACAGAC +
Preference number: 2 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVALRLPP*AQGQTD
Trigger: GTCTGTCTGTCCCTGGGCCCAGGGTGGAAGGCGGAG...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGCAGCAGAGTGCCCGCTaGCAGGTGGGGGCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMQQSAR*QVGASP
Trigger: CGGGGAAGCCCCCACCTGCCAGCGGGCACTCTGCTG...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGGCCACGCTGTGTCCCTaGGTGTGGGCCTGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMATLCP*VWAWPG
Trigger: ACCAGGCCAGGCCCACACCCAGGGACACAGCGTGGC...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTATGTCCTGCAGGAGGTaGGGCCTGGCACGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: GEPEPQLCADSECSRVLGMSCRR*GLARVL
Trigger: GAGGACACGTGCCAGGCCCCACCTCCTGCAGGACAT...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTATTATAGTCAAAGGGTaGCCCCGGCAAGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAIIVKG*PRQAAA
Trigger: TGCAGCTGCTTGCCGGGGTCACCCTTTGACTATAAT...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGACACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 2 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTCTGCCGGATGGGGCATaGGGGTCCTCCGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSLPDGA*GSSEAR
Trigger: CCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAG...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTCCTGATCTTTTGGGCTaGCCACCGTGGCCACAGCGG +
Preference number: 2 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTPDLLG*PPWPQR
Trigger: CCGCTGTGGCCACGGTGGGCAGCCCAAAAGATCAGG...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGCAGAGGGGAGCTGCCTaGACGGTCCTGCCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMQRGAA*TVLPRA
Trigger: TGCCCTTGGCAGGACCGTGCAGGCAGCTCCCCTCTG...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTTGCATCCAGAACCTTGCTaGCAGGGCCTCCCAGCTCGC +
Preference number: 2 (lower is better)
Translates to: AFLCREHPGPGCLVLPHLHPEPC*QGLPAR
Trigger: GCGAGCTGGGAGGCCCTGGCAGCAAGGTTCTGGATG...CAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCGCCATCTGGGAGTCTaGGAGCCTTCCGCAGACCTG +
Preference number: 2 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVARHLGV*EPSADL
Trigger: CAGGTCTGCGGAAGGCTCCCAGACTCCCAGATGGCG...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp CCTGCCTTGTCTAGGGCACATAGTGGACTTGGGGGTCAGGCAGCCTaGCAGACAGCGCCTGGTCCTCCCTGCCCCGCAAAGCAGCGTATA +
Preference number: 2 (lower is better)
Translates to: PALSRAHSGLGGQAA*QTAPGPPCPAKQRI
Trigger: TATACGCTGCTTTGCGGGGCAGGGAGGACCAGGCGCTGTCTGCAAGGCTGCCTGACCCCCAAGTCCACTATGTGCCCTAGACAAGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp AGCTCCCCCACACATGACGCAGGCCCTCCTCAGGGTCCTCCGCTCTaGGACACGTCTGGTGACTTTCCTTTGCTGGCTGGAGAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SSPTHDAGPPQGPPL*DTSGDFPLLAGEVL
Trigger: CAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGAGCGGAGGACCCTGAGGAGGGCCTGCGTCATGTGTGGGGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLGLSVL*AHRRSC
Trigger: GCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCACACTGCTGGGAGGGTaGTGGATCGGGGTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSTLLGG*WIGVGA
Trigger: TGCCCCCACCCCGATCCATCACCCTCCCAGCAGTGT...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTCACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 2 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGGTCACCATCCTCGCTaGTGCCTGGCAGGGGCTCCG +
Preference number: 2 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSGHHPR*CLAGAP
Trigger: CGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTGACC...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTAGCCCAGACGAATTCTaGCTCTGGGGCGGAGCATGG +
Preference number: 2 (lower is better)
Translates to: DFEIRAAETGPTRAPRATSPDEF*LWGGAW
Trigger: CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCT...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CAGAAGGTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCAGAGGCTCACAAACCTaGCAGTGTCTCGGGGCCATG +
Preference number: 2 (lower is better)
Translates to: QKVSDSRLGILSRLRRLRRGSQT*QCLGAM
Trigger: CATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT...GCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCAGAGGGGAGCTGCCTaGACGGTCCTGCCAAGGGCA +
Preference number: 2 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWQRGAA*TVLPRA
Trigger: TGCCCTTGGCAGGACCGTGCAGGCAGCTCCCCTCTG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GGGCTCCCCCTAAGGAACGTAGGGGGCGATTCCTTGGCGCCCGGGAAGGGCTCCGGAACTCAGAGCTGTTaGCTTCTGATCTCAGCGGAA +
Preference number: 2 (lower is better)
Translates to: GLPLRNVGGDSLAPGKGSGTQSC*LLISAE
Trigger: TTCCGCTGAGATCAGAAGGCAACAGCTCTGAGTTCC...GGAGCCCTTCCCGGGCGCCAAGGAATCGCCCCCTACGTTCCTTAGGGGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR GCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGAGCCATCAGCCTGCTaGGGCCGGTTGGGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: GLTGLAESVKGKQPRTLREPSAC*GRLGAL
Trigger: CAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGACATCCAGGCCCCGGCTaGCTGGTCTTGCCCCACTTG +
Preference number: 2 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGHPGPG*LVLPHL
Trigger: CAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATG...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTCCATGGGTGTCCATCTaGAGCCCTGCGGGAGCCGTG +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSPWVSI*SPAGAV
Trigger: CACGGCTCCCGCAGGGCTGCAGATGGACACCCATGG...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGACAGGAGCAGGCCCTCTaGCCTCATAGGGGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGQEQAL*PHRGPL
Trigger: CAAGGGCCCCCTATGAGGGCAGAGGGCCTGCTCCTG...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 2 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp TGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: WRRLPWPSSAGSRRPTRTGHASS*FKCPVS
Trigger: GCTCACAGGACACTTAAACCAGGACGAGGCATGGCC...GGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACCTGGCATCGGGTTCCTaGCACAGCCCCTCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDLASGS*HSPSCP
Trigger: TGGACAGGAGGGGCTGTGCCAGGAACCCGATGCCAG...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTCAGCCCTTACCTGGCTaGGGAGGTGTCTCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTQPLPG*GGVSSR
Trigger: TCTGCTGGAGACACCTCCCCAGCCAGGTAAGGGCTG...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTTCCGGCAGCTACACCTaGAGTGTGGGGCCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSSGSYT*SVGPGP
Trigger: GGGACCAGGCCCCACACTCCAGGTGTAGCTGCCGGA...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTCTGCCCGGGCTCTTGTaGACCCAGCTGTGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSLPGLL*TQLCQR
Trigger: CCTCTGGCACAGCTGGGTCCACAAGAGCCCGGGCAG...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGAAGGGGCGAGCGTCCCTaGCCGCTGTCCATACTCGTC +
Preference number: 2 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGRGERP*PLSILV
Trigger: GACGAGTATGGACAGCGGCCAGGGACGCTCGCCCCT...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp TCCTCTCTTGGACTCGGCGTCCGAGTCAGACACGTGCGTGATGGAGAAGCGGGATCCTCGCTAGGCTCCTaGACGCTGCTCAGACGGCTG +
Preference number: 2 (lower is better)
Translates to: SSLGLGVRVRHVRDGEAGSSLGS*TLLRRL
Trigger: CAGCCGTCTGAGCAGCGTCCAGGAGCCTAGCGAGGA...TCCCGCTTCTCCATCACGCACGTGTCTGACTCGGACGCCGAGTCCAAGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570932.5
3UTR CAA 90 bp CCGCCTCTTGAGGGTACACGCCTCTGGTCACATGGCCATGGAGCCTaGGGTACCCCTGAGTTAAGGGAGGACATTTGGCCAGCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: PPLEGTRLWSHGHGA*GTPELREDIWPAGG
Trigger: GCCACCAGCTGGCCAAATGTCCTCCCTTAACTCAGGGGTACCCAAGGCTCCATGGCCATGTGACCAGAGGCGTGTACCCTCAAGAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp TCCCTGCTGCGTCTTCATGTCCACGTGCCATCTGTGCTGTCACCCTaGGAGCTGCCTGACATCCCCCATCCTGTCCTGTGCTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: SLLRLHVHVPSVLSP*ELPDIPHPVLCCPL
Trigger: GAGGGGACAGCACAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp TCCTCACGGGTTGAGTGGGCCACTCCCCTGGTGCCTGGTGTATATTaGGGATGTGCCAGGGTGTCCAGGAGCAGGCCCTCTGCCCTCATA +
Preference number: 2 (lower is better)
Translates to: SSRVEWATPLVPGVY*GCARVSRSRPSALI
Trigger: TATGAGGGCAGAGGGCCTGCTCCTGGACACCCTGGCACATCCCAAATATACACCAGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp CCAGGTATTTTCTCGGCACTCAGTCGCCTGCTAGATAACCTGGGCTaGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: PGIFSALSRLLDNLG*HTVLAPVTVAHSAR
Trigger: CCGGGCAGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCGACTGAGTGCCGAGAAAATACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTGTAGAAAAATGCTCCTaGACTTTGGGGACTGGATGG +
Preference number: 2 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAVEKCS*TLGTGW
Trigger: CCATCCAGTCCCCAAAGTTCAGGAGCATTTTTCTAC...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTTGCTGGGTCCAGGTTTaGGCTGACGCTCACTCCGGG +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSCWVQV*ADAHSG
Trigger: CCCGGAGTGAGCGTCAGCTCAAACCTGGACCCAGCA...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGTGTGCCTTTGGGGCTaGCAGCCTTGTGGGGACTGG +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSVCLWG*QPCGDW
Trigger: CCAGTCCCCACAAGGCTGTCAGCCCCAAAGGCACAC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGGCCTGAGACAGACCTaGTCAGACGGCTGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWGLRQT*SDGCPV
Trigger: CACTGGGCAGCCGTCTGAGCAGGTCTGTCTCAGGCC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTAAGACAGAAAACAGGTaGTGTCCGCCCGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVAKTENR*CPPGSG
Trigger: CCCAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTT...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTTCCCTAGTGTGGATCTaGAGACCTGGAGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVASLVWI*RPGGLL
Trigger: CAGCAGCCCTCCAGGTCTGCAGATCCACACTAGGGA...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GAGCTGCCCAGGTCTCAAGCCTCTTTACTCTCACCCCCGGCACCAGCTTCAGGTACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 2 (lower is better)
Translates to: ELPRSQASLLSPPAPASGTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...ACCTGAAGCTGGTGCCGGGGGTGAGAGTAAAGAGGCTTGAGACCTGGGCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTGHASS*FKCPVS
Trigger: GCTCACAGGACACTTAAACCAGGACGAGGCATGGCC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCTCTCCTTTGGCAGCTaGGGCACAGGACCAGATACT +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLLSFGS*GTGPDT
Trigger: AGTATCTGGTCCTGTGCCCCAGCTGCCAAAGGAGAG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCTCTCCTTTGGCAGCTaGGGCACAGGACCAGATACT +
Preference number: 2 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWLSFGS*GTGPDT
Trigger: AGTATCTGGTCCTGTGCCCCAGCTGCCAAAGGAGAG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGTGGCGAAGGCTGCCTTaGCCGTCATCAGCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEWRRLP*PSSAGS
Trigger: ACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCGGAGCGCCCGCACCCTaGCTGGAAGATGAACTTCCC +
Preference number: 2 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSGAPAP*LEDELP
Trigger: GGGAAGTTCATCTTCCAGCCAGGGTGCGGGCGCTCC...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp GGTGACCTTGCAGTGGCCTTGGGCTGCAGACTTTGTCATATTCTATaGGCTCAGTTAGGCCCCCACTCAGCACAGCGAGCTCCCCGCCGG +
Preference number: 2 (lower is better)
Translates to: GDLAVALGCRLCHIL*AQLGPHSAQRAPRR
Trigger: CCGGCGGGGAGCTCGCTGTGCTGAGTGGGGGCCTAACTGAGCCAATAGAATATGACAAAGTCTGCAGCCCAAGGCCACTGCAAGGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp GTTTCCCGGCCACGCAGTCTGCCTGGTCTGACAACTCAGCTGGGATaGGGGGTGTCGAAAGCCACTTGCAGTTGGCCAAGAGACTCCCCA +
Preference number: 2 (lower is better)
Translates to: VSRPRSLPGLTTQLG*GVSKATCSWPRDSP
Trigger: TGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTCAGACCAGGCAGACTGCGTGGCCGGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp TGCCTCTCACTCTGGGTGCTGGGCCTTCTCTACTGGGTCCCCTCCTaGGGTTCATGGTATCTTTCTCCCCTCCCGGAAGCTTGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: CLSLWVLGLLYWVPS*GSWYLSPLPEACGL
Trigger: GAGCCCACAAGCTTCCGGGAGGGGAGAAAGATACCATGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAGCACCCAGAGTGAGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGGCACTGGCCCCTTTTaGGTGTGTATGTGTGTACAG +
Preference number: 2 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHGTGPF*VCMCVQ
Trigger: CTGTACACACATACACACTCAAAAGGGGCCAGTGCC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGGCCACTCCTTGCCCTaGGCCACCAGGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRGHSLP*ATRNQA
Trigger: TGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLNSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp CAGAAGGTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 2 (lower is better)
Translates to: QKVSDSRLGILSRLRRLRNSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...GCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACA +
Preference number: 2 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHAYGSS*VSEGET
Trigger: TGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCAAAGAGGTAGACGGTaGCGTCGTCGAAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLQRGRR*RRRRRT
Trigger: TGTCCTTCTTCGACGACGTCACCGTCTACCTCTTTG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTAGCCTTGGGTACCCCTaGGTTAAGGGAGGACATTTG +
Preference number: 2 (lower is better)
Translates to: GEPEPQLCADSECSRVLGSLGYP*VKGGHL
Trigger: CAAATGTCCTCCCTTAACTCAGGGGTACCCAAGGCT...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGAAATATTCCCTGTGCTaGCCTGCCCCCAGCTCCACC +
Preference number: 2 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMKYSLC*PAPSST
Trigger: GGTGGAGCTGGGGGCAGGGCAGCACAGGGAATATTT...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGGCTGATGGCCACATCTaGAGTGCTGCCCATCTGGTG +
Preference number: 2 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMADGHI*SAAHLV
Trigger: CACCAGATGGGCAGCACTGCAGATGTGGCCATCAGC...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGGCTCTGGCTGGCTGTaGCCGGGGCTCCTCTCACTG +
Preference number: 2 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAGSGWL*PGLLSL
Trigger: CAGTGAGAGGAGCCCCGGGCACAGCCAGCCAGAGCC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGAGCCTCTCACTCTGGGTaGTGGGCCTTCTCTACTGGG +
Preference number: 2 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGASHSG*WAFSTG
Trigger: CCCAGTAGAGAAGGCCCAGCACCCAGAGTGAGAGGC...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATC +
Preference number: 2 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTDEFCL*GGAWPI
Trigger: GATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGGCCCCCACTCTCCTTTaGCAGCTGGGGCACAGGACC +
Preference number: 2 (lower is better)
Translates to: SEGETATDFEIRAAETGPAPTLL*QLGHRT
Trigger: GGTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGC...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCGCCACGCAGTCTGCCTaGTCTGACAACTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSATQSA*SDNSAG
Trigger: CCCAGCTGAGTTGTCAGACCAGGCAGACTGCGTGGC...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGACTGGAGCCAGGTGTTaGGCCCACTGGGGACCGGGC +
Preference number: 2 (lower is better)
Translates to: VLFIARVGYGPPSGSRRATGARC*AHWGPG
Trigger: GCCCGGTCCCCAGTGGGCCCAACACCTGGCTCCAGT...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp CCTCCTCAGGGTCCTCCGCTCTTGGACACGTCTGGTGACTTTCCTTaGCTGGCTGGAGAGGTGCTGGTGGTGTCATTGGGTAGTTCGTGG +
Preference number: 2 (lower is better)
Translates to: PPQGPPLLDTSGDFP*LAGEVLVVSLGSSW
Trigger: CCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGAGCGGAGGACCCTGAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp CCAGTGGGACTCTGGAGTCCGGGTCTGAGTCCATTTCCTCACGGGTaGAGTGGGCCACTCCCCTGGTGCCTGGTGTATATTTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: PVGLWSPGLSPFPHG*SGPLPWCLVYIWDV
Trigger: CACATCCCAAATATACACCAGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATGGACTCAGACCCGGACTCCAGAGTCCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp GAGTCCTCAGACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTaGCAGCGCCGATGTGGAAGTGGCCAGATTCTGAGCCGCCTGACT +
Preference number: 2 (lower is better)
Translates to: ESSDPMLPPTEPCVS*QRRCGSGQILSRLT
Trigger: AGTCAGGCGGCTCAGAATCTGGCCACTTCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTCTGAGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCATGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCA +
Preference number: 2 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPWGRGT*ICCQQP
Trigger: TGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCA...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp GTCGTCGAAGAAGGACACGGCCTTCTTCTTGCGTTCCAGGTCCTCGCAGAAGGTTGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCA +
Preference number: 2 (lower is better)
Translates to: VVEEGHGLLLAFQVLAEGWGRGT*ICCQQP
Trigger: TGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCA...ACCTTCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTCCTTCTTCGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGGTTCAGGCCTGTCTTaGATCCCCAGCCTCAGTGGT +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSGSGLS*IPSLSG
Trigger: ACCACTGAGGCTGGGGATTCAAGACAGGCCTGAACC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGTGCCCAGGCTGGTCTTaGACTCCAGGGCTCAAGTGG +
Preference number: 2 (lower is better)
Translates to: EETADARRQKTGAVRPALCPGWS*TPGLKW
Trigger: CCACTTGAGCCCTGGAGTTCAAGACCAGCCTGGGCA...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGAGAGGCTCACAAACCTaGCAGTGTCTCGGGGCCATG +
Preference number: 2 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWRGSQT*QCLGAM
Trigger: CATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGCACTTGAGTCTGGCCTaGACTGGATCCCAGCTGTTC +
Preference number: 2 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLHLSLA*TGSQLF
Trigger: GAACAGCTGGGATCCAGTCCAGGCCAGACTCAAGTG...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp CGGCTCCGTTTCTTCTCGGAATCCTTCTGCTTCACATTCAAGTCATaGGTGAAGCTGCCGCTTGGCCGAGCGCCGTGGCCCACACCTGTA +
Preference number: 2 (lower is better)
Translates to: RLRFFSESFCFTFKS*VKLPLGRAPWPTPV
Trigger: TACAGGTGTGGGCCACGGCGCTCGGCCAAGCGGCAGCTTCACCAATGACTTGAATGTGAAGCAGAAGGATTCCGAGAAGAAACGGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp TCTGACAACTCAGCTGGGATTGGGGGTGTCGAAAGCCACTTGCAGTaGGCCAAGAGACTCCCCAATCCCATTGCCACCCTGTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: SDNSAGIGGVESHLQ*AKRLPNPIATLSCP
Trigger: GGGGCATGACAGGGTGGCAATGGGATTGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp GCCTGGTCTGACAACTCAGCTGGGATTGGGGGTGTCGAAAGCCACTaGCAGTTGGCCAAGAGACTCCCCAATCCCATTGCCACCCTGTCA +
Preference number: 2 (lower is better)
Translates to: AWSDNSAGIGGVESH*QLAKRLPNPIATLS
Trigger: TGACAGGGTGGCAATGGGATTGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTCAGACCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPGLSVL*AHRRSC
Trigger: GCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACC...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTCCCTGCTGCTTCTCCTaGCTAATAAACAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTPCCFS*LINRLL
Trigger: GAGAAGCCTGTTTATTAGGCAGGAGAAGCAGCAGGG...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGTTAGAGAACAGGCCTaGACCAGTGGAGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSVREQA*TSGGLP
Trigger: AGGAAGCCCTCCACTGGTGCAGGCCTGTTCTCTAAC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGGGACTGGATGGAGATaGTCTGGGTTGGCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAGTGWR*SGLALA
Trigger: GGCCAGGGCCAACCCAGAGCATCTCCATCCAGTCCC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCTCTCCTTTGGCAGCTaGGGCACAGGACCAGATACT +
Preference number: 2 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVLSFGS*GTGPDT
Trigger: AGTATCTGGTCCTGTGCCCCAGCTGCCAAAGGAGAG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCACTCCAGGGCTCAAGTaGTTCCTCCTGCTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSTPGLK*FLLLWP
Trigger: AGGCCAAAGCAGGAGGAACCACTTGAGCCCTGGAGT...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTAGTGGGCCACTCCCCTaGTGCCTGGTGTATATTTGG +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSSGPLP*CLVYIW
Trigger: CCAAATATACACCAGGCACCAGGGGAGTGGCCCACT...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTACTGGGTCCCCTCCTTaGGTTCATGGTATCTTTCTC +
Preference number: 2 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVATGSPP*VHGIFL
Trigger: GAGAAAGATACCATGAACCCAAGGAGGGGACCCAGT...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTACCCTGGCTGGAAGATaGACTTCCCGTAAGCACGTA +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSTLAGR*TSRKHV
Trigger: TACGTGCTTACGGGAAGTTCATCTTCCAGCCAGGGT...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCTTCAACTTCTTGTCTTaGGTCGTATTTGTGCATCAG +
Preference number: 2 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPFNFLS*VVFVHQ
Trigger: CTGATGCACAAATACGACTCAAGACAAGAAGTTGAA...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTCAAAAATATTCCCTGTaGTGCCCTGCCCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPQKYSL*CPAPSS
Trigger: GGAGCTGGGGGCAGGGCAGCACAGGGAATATTTTTG...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CAGACCCTGAGGCTCCAGCACGTTGAGAGTAGATCAAAAGATCCTTTCAGCAGGGTCCATCTGCAGCCCTaGGGGAGCCGTGAGCCTAAC +
Preference number: 2 (lower is better)
Translates to: QTLRLQHVESRSKDPFSRVHLQP*GSREPN
Trigger: GTTAGGCTCACGGCTCCCGCAGGGCTGCAGATGGAC...CCTGCTGAAAGGATCTTTTGATCTACTCTCAACGTGCTGGAGCCTCAGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CAGACCCTGAGGCTCCAGCACGTTGAGAGTAGATCAAAAGATCCTTTCAGCAGGGATGGCCAGCTGCTCTaGAGGGCCCATGGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: QTLRLQHVESRSKDPFSRDGQLL*RAHGCP
Trigger: TGGACACCCATGGGCCCTGCAGAGCAGCTGGCCATC...CCTGCTGAAAGGATCTTTTGATCTACTCTCAACGTGCTGGAGCCTCAGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCCCCAGAGGTGGAGGTTaGAGTGAGCTACAATTGCAC +
Preference number: 2 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSPRGGG*SELQLH
Trigger: GTGCAATTGTAGCTCACTGCAACCTCCACCTCTGGG...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp TGTGGAAGTGGCCAGATTCTGAGCCGCCTGACTAGAGTTAGTAAGTaGCCTGGCGTTCTCGTGCAGTCACTGGCCTCTCCAGTGGTTCTC +
Preference number: 2 (lower is better)
Translates to: CGSGQILSRLTRVSK*PGVLVQSLASPVVL
Trigger: GAGAACCACTGGAGAGGCCAGTGACTGCACGAGAACGCCAGGCAACTTACTAACTCTAGTCAGGCGGCTCAGAATCTGGCCACTTCCACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTTGCAAAGCCAGTGCCTaGATCCTTCACAAAGGACGT +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSCKASA*ILHKGR
Trigger: ACGTCCTTTGTGAAGGATGCAGGCACTGGCTTTGCA...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 2 (lower is better)
Translates to: SEGETATDFEIRAAETGPNSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR TCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCATGTGCCTTTGCCACTaGCTTTCTGATGAGAATCGG +
Preference number: 2 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSMCLCH*LSDENR
Trigger: CCGATTCTCATCAGAAAGTCAGTGGCAAAGGCACAT...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCAAAACAAATCCCCCTaGGAAGCAACAATAAACTTT +
Preference number: 2 (lower is better)
Translates to: LPLGRSMADLPSRASHPTQNKSP*EATINF
Trigger: AAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGGAACAAGAAAACATTaGACCAGCGTTCTAAGCCTC +
Preference number: 2 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEGTRKH*TSVLSL
Trigger: GAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCC...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CAGACCCTGAGGCTCCAGCACGTTGAGAGTAGATCAAAAGATCCTTTCAGCAGGGTCCAAGCACAGCTTTaGCAGAGCACAGTCCCGTCC +
Preference number: 2 (lower is better)
Translates to: QTLRLQHVESRSKDPFSRVQAQL*QSTVPS
Trigger: GGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGAC...CCTGCTGAAAGGATCTTTTGATCTACTCTCAACGTGCTGGAGCCTCAGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGAGGGTCCTCCGCTCTTaGACACGTCTGGTGACTTTC +
Preference number: 2 (lower is better)
Translates to: VLFIARVGYGPPSGSRRARVLRS*TRLVTF
Trigger: GAAAGTCACCAGACGTGTCCAAGAGCGGAGGACCCT...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACA +
Preference number: 2 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAAYGSS*VSEGET
Trigger: TGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCAAAACAAATCCCCCTaGGAAGCAACAATAAACTTT +
Preference number: 2 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWQNKSP*EATINF
Trigger: AAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGGAACAAGAAAACATTaGACCAGCGTTCTAAGCCTC +
Preference number: 2 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSGTRKH*TSVLSL
Trigger: GAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 90 bp ATCCCTCTCATCCGTGCTCATCTTGTTCCATTTCAACTTCTTGTCTaGAGTCGTATTTGTGCATCAGCTGTGGCCCCGGGGATATGGGGG +
Preference number: 2 (lower is better)
Translates to: IPLIRAHLVPFQLLV*SRICASAVAPGIWG
Trigger: CCCCCATATCCCCGGGGCCACAGCTGATGCACAAATACGACTCAAGACAAGAAGTTGAAATGGAACAAGATGAGCACGGATGAGAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR TCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTGGCCACTCCTTGCCCTaGGCCACCAGGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAGHSLP*ATRNQA
Trigger: TGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCC...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACAGACGGCTGCCCAGTaGTCGGCAGGCCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKQTAAQ*SAGPAL
Trigger: CAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAAGGTTGCGCGCGCTCTaGCTCTCAGCCACCACCACG +
Preference number: 2 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKRLRAL*LSATTT
Trigger: CGTGGTGGTGGCTGAGAGCCAGAGCGCGCGCAACCT...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTAGCCCAGACGAATTCTaGCTCTGGGGCGGAGCATGG +
Preference number: 2 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCASPDEF*LWGGAW
Trigger: CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCT...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGCAGCCTGTTCCCTGTaGGAAGGGTGGGCTTACGGG +
Preference number: 2 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKAACSL*EGWAYG
Trigger: CCCGTAAGCCCACCCTTCCCACAGGGAACAGGCTGC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATC +
Preference number: 2 (lower is better)
Translates to: NTKQIPLRSNNKLYISLADEFCL*GGAWPI
Trigger: GATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAACACGGCCTTCTTCTTaGGTTCCAGGTCCTCGCAGA +
Preference number: 2 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKTRPSS*VPGPRR
Trigger: TCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGT...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CCA 72 bp TCCACGGGCCCTCTGGCCTCAGTCACGCAGCCTGGGTaGGGAGGGCCCGGCTGCATGGCGGGGCCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: STGPLASVTQPG*GGPGCMAGPGV
Trigger: GACCCCTGGCCCCGCCATGCAGCCGGGCCCTCCCCACCCAGGCTGCGTGACTGAGGCCAGAGGGCCCGTGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GCGCAGCCGGGGCGGGTGCGGCCGGGTCTAGGGCCATaGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGT +
Preference number: 3 (lower is better)
Translates to: AQPGRVRPGLGP*RRLPWPSSAGS
Trigger: ACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCACCCGCCCCGGCTGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CCA 72 bp AGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATaGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCT +
Preference number: 3 (lower is better)
Translates to: RPCAAGSGGREP*TPPPGSSAGSP
Trigger: AGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR-3UTR CAA 90 bp CGGGTGCGGCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: RVRPGLGPWRRLPWPSSAPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...CGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR TCA 72 bp CCCCGGCAAGCAGCTGCAGCCCGGGCCTTTCCCGCCTaGCTCGCAGCGCCAGCTTGGGCTCCTTCGGGTGTG +
Preference number: 3 (lower is better)
Translates to: PRQAAAARAFPA*LAAPAWAPSGV
Trigger: CACACCCGAAGGAGCCCAAGCTGGCGCTGCGAGTCAGGCGGGAAAGGCCCGGGCTGCAGCTGCTTGCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TGCAGGACGCCACAGGCCACCTCACAGGCCATGCGCTaGAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCC +
Preference number: 3 (lower is better)
Translates to: CRTPQATSQAMR*RVRGSGAMDSA
Trigger: GGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGTGAGGTGGCCTGTGGCGTCCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR TCA 72 bp AGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTaGGCCACCAGGAACCAGGCAAGGGTGGGGGCACAG +
Preference number: 3 (lower is better)
Translates to: RTDTGAQGHSLP*ATRNQARVGAQ
Trigger: CTGTGCCCCCACCCTTGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR GCA 72 bp GAAACCCCAGGCCTGAGACAGACCTGCTCAGACGGCTaGCCAGTGCTCGGCAGGCCCAGCTCTGGCCCGGGG +
Preference number: 3 (lower is better)
Translates to: ETPGLRQTCSDG*PVLGRPSSGPG
Trigger: CCCCGGGCCAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGGTCTGTCTCAGGCCTGGGGTTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR CCA 72 bp CAGGGCTGGGCTGGACGCTCTGCCACGCTGTGTCCCTaGGTGTGGGCCTGGCCTGGTGGGGGAGCCACCAAA +
Preference number: 3 (lower is better)
Translates to: QGWAGRSATLCP*VWAWPGGGATK
Trigger: TTTGGTGGCTCCCCCACCAGGCCAGGCCCACACCCAGGGACACAGCGTGGCAGAGCGTCCAGCCCAGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GCAGCGGAGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCCCCGGGGCCAGAGCCTaGTGCCTCCCCGGAAACCCC +
Preference number: 3 (lower is better)
Translates to: AAELLVRLVAVLTVLLLLPGARA*CLPGNP
Trigger: GGGGTTTCCGGGGAGGCACAAGGCTCTGGCCCCGGG...GAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCTCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR CAA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGGTAGGGGGCGATTCCTaGGCGCCCGGGAAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: LPLGRSMADLPSRASHPTVGGDS*APGKGS
Trigger: GGAGCCCTTCCCGGGCGCCAAGGAATCGCCCCCTAC...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR GCA 72 bp GGACGTGGTCCCCACCTTCTCGGTCACCATCCTCGCTaGTGCCTGGCAGGGGCTCCGGTGACGCCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: GRGPHLLGHHPR*CLAGAPVTPAL
Trigger: CAAGGCTGGCGTCACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTGACCGAGAAGGTGGGGACCACGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR GCA 72 bp GAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACCAGGCAAGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: ETGPTRAPRATP*PEPPGTRQGWG
Trigger: CCCCCACCCTTGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR GCA 72 bp TGTGCCTCCCCGGAAACCCCAGGCCTGAGACAGACCTaGTCAGACGGCTGCCCAGTGCTCGGCAGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: CASPETPGLRQT*SDGCPVLGRPS
Trigger: GCTGGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGGTCTGTCTCAGGCCTGGGGTTTCCGGGGAGGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR GCA 72 bp CAGAGCCCAGGCCTCTGCATTCTGAGGCCAGCGCCCTaGCCGCCCAACAGCTCCCCCACACATGACGCAGGC +
Preference number: 3 (lower is better)
Translates to: QSPGLCILRPAP*PPNSSPTHDAG
Trigger: GCCTGCGTCATGTGTGGGGGAGCTGTTGGGCGGGCAGGGCGCTGGCCTCAGAATGCAGAGGCCTGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp GGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTaGCGTGGGGGCCCCGCCTTGTGCCCACCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: GMDLLPVPGVRL*RGGPALCPPLP
Trigger: TGGCAGAGGTGGGCACAAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CGCGAACCCACCACCCTCTTCCGCTGTGGAGCCATTTaGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: REPTTLFRCGAI*GAISLLRPVGG
Trigger: GCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCGGAAGAGGGTGGTGGGTTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CCA 72 bp GTGCGGCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTaGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGA +
Preference number: 3 (lower is better)
Translates to: VRPGLGPWRRLP*PSSAGSRRPTR
Trigger: TCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CCA 72 bp GTCCGCCCAAGGGCCAGAAGGCCGGGAGCACGGGGATaGGAGCGCCCGCACCCTGGCTGGAAGATGAACTTC +
Preference number: 3 (lower is better)
Translates to: VRPRARRPGARG*ERPHPGWKMNF
Trigger: GAAGTTCATCTTCCAGCCAGGGTGCGGGCGCTCCCATCCCCGTGCTCCCGGCCTTCTGGCCCTTGGGCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CTGCCTTCTCTGGATGCCCCCATGCCAGGGCTGGGCTaGACGCTCTGCCACGCTGTGTCCCTGGGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: LPSLDAPMPGLG*TLCHAVSLGVG
Trigger: GCCCACACCCAGGGACACAGCGTGGCAGAGCGTCCAGCCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CAGGGTGGGGAAATAGGGACGCCCAGCCCCTCCTTGTaGGCCTGCTGTCCCAGCCAGCCTTGGGCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: QGGEIGTPSPSL*ACCPSQPWALA
Trigger: GGCCAGAGCCCAAGGCTGGCTGGGACAGCAGGCCCACAAGGAGGGGCTGGGCGTCCCTATTTCCCCACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CGCTGCCCAGGGCCATGTCCTGCAGGAGGTGGGGCCTaGCACGTGTCCTCCGGCAGGGACCAATGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: RCPGPCPAGGGA*HVSSGRDQCLW
Trigger: CCACAGACATTGGTCCCTGCCGGAGGACACGTGCCAGGCCCCACCTCCTGCAGGACATGGCCCTGGGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTaGGGGCCCCGCCTTGTGCCCACCTCTGCCAGGTAT +
Preference number: 3 (lower is better)
Translates to: GPPSGSRRASLP*GPRLVPTSARY
Trigger: ATACCTGGCAGAGGTGGGCACAAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CTCTCTTGGACTCGGCGTCCGAGTCAGACACGTGCGTaGTGGAGAAGCGGGACGTGGGCGCGGGCGACACCG +
Preference number: 3 (lower is better)
Translates to: LSWTRRPSQTRA*WRSGTWARATP
Trigger: CGGTGTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGTGTCTGACTCGGACGCCGAGTCCAAGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR GCA 72 bp GGTCCTCTCTTGGACTCGGCGTCCGAGTCAGACACGTaGGTGATGGAGAAGCGGGACGTGGGCGCGGGCGAC +
Preference number: 3 (lower is better)
Translates to: GPLLDSASESDT*VMEKRDVGAGD
Trigger: GTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGTGTCTGACTCGGACGCCGAGTCCAAGAGAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR GCA 72 bp TCGCTCCTGCGGCCAAAGGCCAGCTGTCAGGTGCTATaGGGGGTCACCAGCAGAGTGCCCGCTGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: SLLRPKASCQVL*GVTSRVPAGRW
Trigger: CCACCTGCCAGCGGGCACTCTGCTGGTGACCCCGCATAGCACCTGACAGCTGGCCTTTGGCCGCAGGAGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp ACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTaGGTCTTTGCCGTGGGGGCCCCGCCTTGTGCCCAC +
Preference number: 3 (lower is better)
Translates to: TSWVWTSFRFPA*VFAVGAPPCAH
Trigger: GTGGGCACAAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp AGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTaGATGCCCCCATGCCAGGGCTGGGCTGGACGCTCT +
Preference number: 3 (lower is better)
Translates to: SPAGAVSLTCLL*MPPCQGWAGRS
Trigger: AGAGCGTCCAGCCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CTGTCAGGGACCACGTCCCTTGGAGGGCAGAGACCCTaGGTAGCAGTGCCGGTGGGGCAGTGGTGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: LSGTTSLGGQRP*VAVPVGQWCSA
Trigger: GGCTGAGCACCACTGCCCCACCGGCACTGCTACCCAGGGTCTCTGCCCTCCAAGGGACGTGGTCCCTGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTACGCCCAGCCCCTCCTaGTGGGCCTGCTGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVATPSPS*WACCPS
Trigger: GCTGGGACAGCAGGCCCACAAGGAGGGGCTGGGCGT...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TCCATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTaGCTTCTCTGGATGCCCCCATGCCAGGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: SICSPAGAVSLT*LLWMPPCQGWA
Trigger: AGCCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp AGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTaGCGACTCCGAGTGCTCCAGGGTTCTAGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: RRRPGRARAPAV*RLRVLQGSRSP
Trigger: AGGAGACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CTAACCTGCCTTCTCTGGATGCCCCCATGCCAGGGCTaGGCTGGACGCTCTGCCACGCTGTGTCCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: LTCLLWMPPCQG*AGRSATLCPWV
Trigger: CACCCAGGGACACAGCGTGGCAGAGCGTCCAGCCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAGGTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CAA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTGGCCCCCACTCTCCTTaGGCAGCTGGGGCACAGGAC +
Preference number: 3 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTGPHSP*AAGAQD
Trigger: GTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGCC...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCACTGAGGGGCCGCCTCTaGAGGGTACACGCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPLRGRL*RVHASG
Trigger: ACCAGAGGCGTGTACCCTCAAGAGGCGGCCCCTCAG...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGCCCCTCACTGGGAGGTaGTGGCTGGCCTGCCCCGCC +
Preference number: 3 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMPLTGR*WLACPA
Trigger: GGCGGGGCAGGCCAGCCACAACCTCCCAGTGAGGGG...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTTCCCCTCCCGGAAGCTaGTGGGCTCTGGCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: GEPEPQLCADSECSRVLGSPPGS*WALAGC
Trigger: ACAGCCAGCCAGAGCCCACAAGCTTCCGGGAGGGGA...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGCCGGATGGGGCATGCG +
Preference number: 3 (lower is better)
Translates to: LGAMPRPGLSVL*AHRRSCRMGHA
Trigger: CGCATGCCCCATCCGGCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR GCA 72 bp CCTCCTCCTTACCCAACCTCCCATCCAGAACCTTGCTaGCAGGGCCTCCCAGCTCGCTCCTGCGGCCAAAGG +
Preference number: 3 (lower is better)
Translates to: PPPYPTSHPEPC*QGLPARSCGQR
Trigger: CCTTTGGCCGCAGGAGCGAGCTGGGAGGCCCTGGCAGCAAGGTTCTGGATGGGAGGTTGGGTAAGGAGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CTAGGGCACATAGTGGACTTGGGGGTCAGGCAGCCTTaGAGACAGCGCCTGGTCCTCCCTGCCCCGCAAAGC +
Preference number: 3 (lower is better)
Translates to: LGHIVDLGVRQP*RQRLVLPAPQS
Trigger: GCTTTGCGGGGCAGGGAGGACCAGGCGCTGTCTGCAAGGCTGCCTGACCCCCAAGTCCACTATGTGCCCTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp GGCCTGGCCTGGTGGGGGAGCCACCAAACTGGTGTGTaGCCGGTTCAGGCCTGTCTTGAATCCCCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: GLAWWGSHQTGV*PVQACLESPAS
Trigger: TGAGGCTGGGGATTCAAGACAGGCCTGAACCGGGCACACACCAGTTTGGTGGCTCCCCCACCAGGCCAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp AGGGCTGAGGGGCCGCCTCTTGAGGGTACACGCCTCTaGTCACATGGCCATGGAGCCTTGGGTACCCCTGAG +
Preference number: 3 (lower is better)
Translates to: RAEGPPLEGTRL*SHGHGALGTPE
Trigger: CTCAGGGGTACCCAAGGCTCCATGGCCATGTGACCAGAGGCGTGTACCCTCAAGAGGCGGCCCCTCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CCCAGCCCACACTGCTGGGAGGGTGATGGATCGGGGTaGGGGCACCCTGCCTTGTCTAGGGCACATAGTGGA +
Preference number: 3 (lower is better)
Translates to: PSPHCWEGDGSG*GHPALSRAHSG
Trigger: TCCACTATGTGCCCTAGACAAGGCAGGGTGCCCCCACCCCGATCCATCACCCTCCCAGCAGTGTGGGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CACCAGTGGAGGGCTTCCTACCCCTGCAGCTCCCCGTaGGGTCCAGGCAAGCGATGTGCCTTTGCCACTGAC +
Preference number: 3 (lower is better)
Translates to: HQWRASYPCSSP*GPGKRCAFATD
Trigger: GTCAGTGGCAAAGGCACATCGCTTGCCTGGACCCCACGGGGAGCTGCAGGGGTAGGAAGCCCTCCACTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp ACCCTGGGGAGCTCCATAGGCACTGGAGCCAGGTGTTaGGCCCACTGGGGACCGGGCTGTGCTGTTAGTCTG +
Preference number: 3 (lower is better)
Translates to: TLGSSIGTGARC*AHWGPGCAVSL
Trigger: CAGACTAACAGCACAGCCCGGTCCCCAGTGGGCCCAACACCTGGCTCCAGTGCCTATGGAGCTCCCCAGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp TGCCTGGCGTTCTCGTGCAGTCACTGGCCTCTCCAGTaGTTCTCCACGGGCCCTCTGGCCTCAGTCACGCAG +
Preference number: 3 (lower is better)
Translates to: CLAFSCSHWPLQ*FSTGPLASVTQ
Trigger: CTGCGTGACTGAGGCCAGAGGGCCCGTGGAGAACCACTGGAGAGGCCAGTGACTGCACGAGAACGCCAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: GLAASLKAQTNSASGAEHPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CAA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCGACACGGCCTTCTTCTaGCGTTCCAGGTCCTCGCAG +
Preference number: 3 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSDTAFF*RSRSSQ
Trigger: CTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTC...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CAA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTCTCCCATCCAGAACCTaGCTGCCAGGGCCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTLPSRT*LPGPPS
Trigger: GCTGGGAGGCCCTGGCAGCAAGGTTCTGGATGGGAG...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CGGTTCAGGCCTGTCTTGAATCCCCAGCCTCAGTGGTaGTGTCCGCCCCTCACTGGGAGGTTGTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: RFRPVLNPQPQW*CPPLTGRLWLA
Trigger: GGCCAGCCACAACCTCCCAGTGAGGGGCGGACATCACCACTGAGGCTGGGGATTCAAGACAGGCCTGAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp TGCAGACCTGGAGGGCTGCTGGGTCCAGGTTTGAGCTaGCGCTCACTCCGGGGACCACAGGGCCATTATGGG +
Preference number: 3 (lower is better)
Translates to: CRPGGLLGPGLS*RSLRGPQGHYG
Trigger: CCCATAATGGCCCTGTGGTCCCCGGAGTGAGCGTCAGCTCAAACCTGGACCCAGCAGCCCTCCAGGTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTaGCCCCGGCAAGCAGCTGCAGCCCGGGCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: PALLGASIIVKG*PRQAAAARAFP
Trigger: GGGAAAGGCCCGGGCTGCAGCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TGCTCTGCAGGGCCCATGGGTGTCCATCTGCAGCCCTaGGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGAT +
Preference number: 3 (lower is better)
Translates to: CSAGPMGVHLQP*GSREPNLPSLD
Trigger: ATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGATGGACACCCATGGGCCCTGCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TGCTGGTGGTGTCATTGGGTAGTTCGTGGCAATCGCTaGCCAGGGCCATGTCCTGCAGGAGGTGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: CWWCHWVVRGNR*PGPCPAGGGAW
Trigger: CCAGGCCCCACCTCCTGCAGGACATGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TCCAGGAGCAGGCCCTCTGCCCTCATAGGGGGCCCTTaGCCACACCTTCCAATCGCCTACACCTGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: SRSRPSALIGGP*PHLPIAYTCVW
Trigger: CCAGACACAGGTGTAGGCGATTGGAAGGTGTGGGCAAGGGCCCCCTATGAGGGCAGAGGGCCTGCTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CCCTCCTCTGCACCCCCGAGTCCTCAGACCCCATGCTaGCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCC +
Preference number: 3 (lower is better)
Translates to: PSSAPPSPQTPC*LQLSLVFPCSA
Trigger: GGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTCTGAGGACTCGGGGGTGCAGAGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CCCATTTCTAATCTCCCCAGAGCTCCCTCCGGACCCTaGGCCTGCGGAGGAACTCGGGCCACAGAGCACTTC +
Preference number: 3 (lower is better)
Translates to: PISNLPRAPSGP*ACGGTRATEHF
Trigger: GAAGTGCTCTGTGGCCCGAGTTCCTCCGCAGGCCCAGGGTCCGGAGGGAGCTCTGGGGAGATTAGAAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GAGAACCACGCGGCTGCACTGCCCTCGGCTGTGGTCTaGGCCAGATCTAGGACCCTTCTCTGGGAACCCACT +
Preference number: 3 (lower is better)
Translates to: ENHAAALPSAVV*ARSRTLLWEPT
Trigger: AGTGGGTTCCCAGAGAAGGGTCCTAGATCTGGCCCAGACCACAGCCGAGGGCAGTGCAGCCGCGTGGTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GCCTGGCACGTGTCCTCCGGCAGGGACCAATGTCTGTaGCTAACGTGTGGTGACCTTGCAGTGGCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: AWHVSSGRDQCL*LTCGDLAVALG
Trigger: GCCCAAGGCCACTGCAAGGTCACCACACGTTAGCCACAGACATTGGTCCCTGCCGGAGGACACGTGCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CTTCGGGTGTGTGTGCCTTTGGGGCTGACAGCCTTGTaGGGACTGGAGGTCAGGGTCCTGGGGAGAACCCTG +
Preference number: 3 (lower is better)
Translates to: LRVCVPLGLTAL*GLEVRVLGRTL
Trigger: CAGGGTTCTCCCCAGGACCCTGACCTCCAGTCCCCACAAGGCTGTCAGCCCCAAAGGCACACACACCCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTCACCTTGGCTGGGCCTaGGGGCTCCGGAGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSHLGWA*GLRRLW
Trigger: CCAGAGCCTCCGGAGCCCCAAGGCCCAGCCAAGGTG...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
3UTR-3UTR CAA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGACACGGCCTTCTTCTaGCGTTCCAGGTCCTCGCAG +
Preference number: 3 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWDTAFF*RSRSSQ
Trigger: CTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR-3UTR CAA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCGAGCCTTGTGTTTCCTaGCAGCGCCGATGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPEPCVS*QRRCGS
Trigger: ACTTCCACATCGGCGCTGCAAGGAAACACAAGGCTC...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAAGGGACAGACAGACATaGCCCTCAGAAGGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPRDRQT*PSEGQG
Trigger: TCCCTGCCCTTCTGAGGGCAATGTCTGTCTGTCCCT...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CACGGGGATGGGAGCGCCCGCACCCTGGCTGGAAGATaGACTTCCCGTAAGCACGTAATTCCCTGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: HGDGSARTLAGR*TSRKHVIPCRS
Trigger: GGACCTGCAGGGAATTACGTGCTTACGGGAAGTTCATCTTCCAGCCAGGGTGCGGGCGCTCCCATCCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp AACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTTaGGTCTGGCCTGGACTGGATCCCAGCTGTTCTAGG +
Preference number: 3 (lower is better)
Translates to: NIQAPAAWSCPT*VWPGLDPSCSR
Trigger: CCTAGAACAGCTGGGATCCAGTCCAGGCCAGACTCAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CGTCCAGCTGAAGCCGACAGTGACCAACGACAGGTCTaGCCCCCTCCTCAGCTGATGGCCACATCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: RPAEADSDQRQV*PPPQLMATSAV
Trigger: CACTGCAGATGTGGCCATCAGCTGAGGAGGGGGGCAGACCTGTCGTTGGTCACTGTCGGCTTCAGCTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCTaGAGCCCGGGCCTTTCCCGCCTGACTCGCAGCGCC +
Preference number: 3 (lower is better)
Translates to: FNYSQRVTPASS*SPGLSRLTRSA
Trigger: GGCGCTGCGAGTCAGGCGGGAAAGGCCCGGGCTGCAGCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp AGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCACCATCCTCGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RHLNLLPTATRT*SPPSRSPSSLL
Trigger: CAGCAGCGAGGATGGTGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 72 bp CCTCAGCTGATGGCCACATCTGCAGTGCTGCCCATCTaGTGGCTTCCCCCGCCCTTCCCATGTAGCCTGTTC +
Preference number: 3 (lower is better)
Translates to: PQLMATSAVLPI*WLPPPFPCSLF
Trigger: GAACAGGCTACATGGGAAGGGCGGGGGAAGCCACCAGATGGGCAGCACTGCAGATGTGGCCATCAGCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GCTGGAGAGGTGCTGGTGGTGTCATTGGGTAGTTCGTaGCAATCGCTGCCCAGGGCCATGTCCTGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: AGEVLVVSLGSS*QSLPRAMSCRR
Trigger: CCTCCTGCAGGACATGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GAGCTGACGCTCACTCCGGGGACCACAGGGCCATTATaGGTCCAATTCCAGTGGGACTCTGGAGTCCGGGTC +
Preference number: 3 (lower is better)
Translates to: ELTLTPGTTGPL*VQFQWDSGVRV
Trigger: GACCCGGACTCCAGAGTCCCACTGGAATTGGACCCATAATGGCCCTGTGGTCCCCGGAGTGAGCGTCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp AGCTCCATAGGCACTGGAGCCAGGTGTTGGGCCCACTaGGGACCGGGCTGTGCTGTTAGTCTGACCTTGCCT +
Preference number: 3 (lower is better)
Translates to: SSIGTGARCWAH*GPGCAVSLTLP
Trigger: AGGCAAGGTCAGACTAACAGCACAGCCCGGTCCCCAGTGGGCCCAACACCTGGCTCCAGTGCCTATGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCGGGCACATAGTGGACTaGGGGGTCAGGCAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSGHIVD*GVRQPC
Trigger: GCAAGGCTGCCTGACCCCCAAGTCCACTATGTGCCC...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CCACCAAACTGGTGTGTGCCCGGTTCAGGCCTGTCTTaGATCCCCAGCCTCAGTGGTGATGTCCGCCCCTCA +
Preference number: 3 (lower is better)
Translates to: PPNWCVPGSGLS*IPSLSGDVRPS
Trigger: TGAGGGGCGGACATCACCACTGAGGCTGGGGATTCAAGACAGGCCTGAACCGGGCACACACCAGTTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CCCTCCTCAGGGTCCTCCGCTCTTGGACACGTCTGGTaGCTTTCCTTTGCTGGCTGGAGAGGTGCTGGTGGT +
Preference number: 3 (lower is better)
Translates to: PSSGSSALGHVW*LSFAGWRGAGG
Trigger: ACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGAGCGGAGGACCCTGAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TGTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTaGCTGGTCTTGCCCCACTTGAGTCTGGCCTGGACT +
Preference number: 3 (lower is better)
Translates to: CAFLCREHPGPG*LVLPHLSLAWT
Trigger: AGTCCAGGCCAGACTCAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp GGTCAGGCAGCCTTGCAGACAGCGCCTGGTCCTCCCTaGCCCGCAAAGCAGCGTATATTGTCTGTGAGCTCT +
Preference number: 3 (lower is better)
Translates to: GQAALQTAPGPP*PAKQRILSVSS
Trigger: AGAGCTCACAGACAATATACGCTGCTTTGCGGGGCAGGGAGGACCAGGCGCTGTCTGCAAGGCTGCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp ATGTCCACGTGCCATCTGTGCTGTCACCCTTGGAGCTaGCTGACATCCCCCATCCTGTCCTGTGCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: MSTCHLCCHPWS*LTSPILSCAVP
Trigger: GGGGACAGCACAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp GCACAGTCCCGTCCCTGCTGCGTCTTCATGTCCACGTaGCATCTGTGCTGTCACCCTTGGAGCTGCCTGACA +
Preference number: 3 (lower is better)
Translates to: AQSRPCCVFMST*HLCCHPWSCLT
Trigger: TGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CCACTTGCAGTTGGCCAAGAGACTCCCCAATCCCATTaGCACCCTGTCATGCCCCAGCTTTGGGCCCTGGGA +
Preference number: 3 (lower is better)
Translates to: PLAVGQETPQSH*HPVMPQLWALG
Trigger: TCCCAGGGCCCAAAGCTGGGGCATGACAGGGTGGCAATGGGATTGGGGAGTCTCTTGGCCAACTGCAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATaGCCGATCTACCATCCAGGGCCTCTCATCCCACGG +
Preference number: 3 (lower is better)
Translates to: KSPDEFCLWGGA*PIYHPGPLIPR
Trigger: CCGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 72 bp ATGCTCCTGAACTTTGGGGACTGGATGGAGATGCTCTaGGTTGGCCCTGGCCACCACCTTGCCTTCCGCCTC +
Preference number: 3 (lower is better)
Translates to: MLLNFGDWMEML*VGPGHHLAFRL
Trigger: GAGGCGGAAGGCAAGGTGGTGGCCAGGGCCAACCCAGAGCATCTCCATCCAGTCCCCAAAGTTCAGGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GACACTGGCTCCATCCCTAGTGTGGATCTGCAGACCTaGAGGGCTGCTGGGTCCAGGTTTGAGCTGACGCTC +
Preference number: 3 (lower is better)
Translates to: DTGSIPSVDLQT*RAAGSRFELTL
Trigger: GAGCGTCAGCTCAAACCTGGACCCAGCAGCCCTCCAGGTCTGCAGATCCACACTAGGGATGGAGCCAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GAGTTAGTAAGTTGCCTGGCGTTCTCGTGCAGTCACTaGCCTCTCCAGTGGTTCTCCACGGGCCCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: ELVSCLAFSCSH*PLQWFSTGPLA
Trigger: GGCCAGAGGGCCCGTGGAGAACCACTGGAGAGGCCAGTGACTGCACGAGAACGCCAGGCAACTTACTAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp TTTCTGATGAGAATCGGCTGTGATTCGGGGCAGGAGTaGGAACCACGCGGCTGCACTGCCCTCGGCTGTGGT +
Preference number: 3 (lower is better)
Translates to: FLMRIGCDSGQE*EPRGCTALGCG
Trigger: ACCACAGCCGAGGGCAGTGCAGCCGCGTGGTTCTCACTCCTGCCCCGAATCACAGCCGATTCTCATCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CCCCAAGTTGCTAGGAGGGCGGCTCTGCAAAGCCAGTaGCTGCATCCTTCACAAAGGACGTTGGTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: PQVARRAALQSQ*LHPSQRTLVPV
Trigger: CACAGGGACCAACGTCCTTTGTGAAGGATGCAGGCACTGGCTTTGCAGAGCCGCCCTCCTAGCAACTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp AGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATCTACCATCCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: SSKPKSPDEFCL*GGAWPIYHPGP
Trigger: AGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 72 bp ACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: TNLPVSRGHASS*FKCPVSTPEEL
Trigger: CAGCTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 72 bp AGCAGGGTGCCAATGCTTAGACGCCATCTGGGAGTCTaGGAGCCTTCCGCAGACCTGTCAGTCTCTTCCACG +
Preference number: 3 (lower is better)
Translates to: SRVPMLRRHLGV*EPSADLSVSST
Trigger: CGTGGAAGAGACTGACAGGTCTGCGGAAGGCTCCCAGACTCCCAGATGGCGTCTAAGCATTGGCACCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GGGCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTaGCAGGCAGACAGGGCATGGGCAGACATCAGTGAT +
Preference number: 3 (lower is better)
Translates to: GPQSTSLGVGLA*QADRAWADISD
Trigger: ATCACTGATGTCTGCCCATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CTGGGCCTTCTCTACTGGGTCCCCTCCTTGGGTTCATaGTATCTTTCTCCCCTCCCGGAAGCTTGTGGGCTC +
Preference number: 3 (lower is better)
Translates to: LGLLYWVPSLGS*YLSPLPEACGL
Trigger: GAGCCCACAAGCTTCCGGGAGGGGAGAAAGATACCATGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTGGGCACTGGCCCCTTTaGAGTGTGTATGTGTGTACA +
Preference number: 3 (lower is better)
Translates to: DFEIRAAETGPTRAPRATGHWPL*SVYVCT
Trigger: TGTACACACATACACACTCAAAAGGGGCCAGTGCCC...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CAA 90 bp CAGACCCTGAGGCTCCAGCACGTTGAGAGTAGATCAAAAGATCCTTTCAGCAGGCCCGGCTGCCTGGTCTaGCCCCACTTGAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: QTLRLQHVESRSKDPFSRPGCLV*PHLSLA
Trigger: GGCCAGACTCAAGTGGGGCAAGACCAGGCAGCCGGG...CCTGCTGAAAGGATCTTTTGATCTACTCTCAACGTGCTGGAGCCTCAGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp GTAGAGACGGGTACGCTTTGCTGCCCAGGCTGGTCTTaGACTCCAGGGCTCAAGTGGTTCCTCCTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: VETGTLCCPGWS*TPGLKWFLLLW
Trigger: CCAAAGCAGGAGGAACCACTTGAGCCCTGGAGTTCAAGACCAGCCTGGGCAGCAAAGCGTACCCGTCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CTCCGGCAGGGACCAATGTCTGTGGCTAACGTGTGGTaGCCTTGCAGTGGCCTTGGGCTGCAGACTTTGTCA +
Preference number: 3 (lower is better)
Translates to: LRQGPMSVANVW*PCSGLGLQTLS
Trigger: TGACAAAGTCTGCAGCCCAAGGCCACTGCAAGGTCACCACACGTTAGCCACAGACATTGGTCCCTGCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp CCCACGCTGGACCCGATTCCAGAAGGGCCCACCTTCTaGAGACACGAAGAAACAGCTGACGCGAGAAGACAG +
Preference number: 3 (lower is better)
Translates to: PTLDPIPEGPTF*RHEETADARRQ
Trigger: CTGTCTTCTCGCGTCAGCTGTTTCTTCGTGTCTTCAGAAGGTGGGCCCTTCTGGAATCGGGTCCAGCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp AAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTaGGTCTTCATGTCCACGTGCCATCTGTGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: KHSFARAQSRPC*VFMSTCHLCCH
Trigger: GTGACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTaGTGCGTCTTCATGTCCACGTGCCATCTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: SKHSFARAQSRP*CVFMSTCHLCC
Trigger: ACAGCACAGATGGCACGTGGACATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp GCTCCAGGTAATGGCTCCAGAGTCCAAGCACAGCTTTaGCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCAT +
Preference number: 3 (lower is better)
Translates to: APGNGSRVQAQL*QSTVPSLLRLH
Trigger: ATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTCTGGAGCCATTACCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CACCCTTCCATCCCCAAGTTGCTAGGAGGGCGGCTCTaGAAAGCCAGTGCCTGCATCCTTCACAAAGGACGT +
Preference number: 3 (lower is better)
Translates to: HPSIPKLLGGRL*KASACILHKGR
Trigger: ACGTCCTTTGTGAAGGATGCAGGCACTGGCTTTGCAGAGCCGCCCTCCTAGCAACTTGGGGATGGAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GTCTTCATGTCCACGTGCCATCTGTGCTGTCACCCTTaGAGCTGCCTGACATCCCCCATCCTGTCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: VFMSTCHLCCHP*SCLTSPILSCA
Trigger: AGCACAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp TTCCTTTGCTGGCTGGAGAGGTGCTGGTGGTGTCATTaGGTAGTTCGTGGCAATCGCTGCCCAGGGCCATGT +
Preference number: 3 (lower is better)
Translates to: FLCWLERCWWCH*VVRGNRCPGPC
Trigger: ACATGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GCTGTCCGCCCGGCTCTGGGTCTGGAGTCACCCAACTaGTCGAAATGCATTTGTGACGGCTCCGTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: AVRPALGLESPN*SKCICDGSVSS
Trigger: AGAAGAAACGGAGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CAGCTGGGATTGGGGGTGTCGAAAGCCACTTGCAGTTaGCCAAGAGACTCCCCAATCCCATTGCCACCCTGT +
Preference number: 3 (lower is better)
Translates to: QLGLGVSKATCS*PRDSPIPLPPC
Trigger: ACAGGGTGGCAATGGGATTGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp GAGTCCGGGTCTGAGTCCATTTCCTCACGGGTTGAGTaGGCCACTCCCCTGGTGCCTGGTGTATATTTGGGA +
Preference number: 3 (lower is better)
Translates to: ESGSESISSRVE*ATPLVPGVYLG
Trigger: TCCCAAATATACACCAGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATGGACTCAGACCCGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp TCTGGGTGCTGGGCCTTCTCTACTGGGTCCCCTCCTTaGGTTCATGGTATCTTTCTCCCCTCCCGGAAGCTT +
Preference number: 3 (lower is better)
Translates to: SGCWAFSTGSPP*VHGIFLPSRKL
Trigger: AAGCTTCCGGGAGGGGAGAAAGATACCATGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAGCACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAAGGAACAAGAAAACATaGCACCAGCGTTCTAAGCCT +
Preference number: 3 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTRNKKT*HQRSKP
Trigger: AGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR TCA 72 bp TGTTCCCTGTGGGAAGGGTGGGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACAGCCACGGACTTTGAG +
Preference number: 3 (lower is better)
Translates to: CSLWEGWAYGSS*VSEGETATDFE
Trigger: CTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACAGGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CCA 72 bp GACAGAAAACAGGTGCTGTCCGCCCGGCTCTGGGTCTaGAGTCACCCAACTGGTCGAAATGCATTTGTGACG +
Preference number: 3 (lower is better)
Translates to: DRKQVLSARLWV*SHPTGRNAFVT
Trigger: CGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAGCACCTGTTTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp TGCAAAGCCAGTGCCTGCATCCTTCACAAAGGACGTTaGTCCCTGTGTCTCCCTGGTGGTCACAGCAGGCAT +
Preference number: 3 (lower is better)
Translates to: CKASACILHKGR*SLCLPGGHSRH
Trigger: ATGCCTGCTGTGACCACCAGGGAGACACAGGGACCAACGTCCTTTGTGAAGGATGCAGGCACTGGCTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CACAGGGCCATTATGGGTCCAATTCCAGTGGGACTCTaGAGTCCGGGTCTGAGTCCATTTCCTCACGGGTTG +
Preference number: 3 (lower is better)
Translates to: HRAIMGPIPVGL*SPGLSPFPHGL
Trigger: CAACCCGTGAGGAAATGGACTCAGACCCGGACTCCAGAGTCCCACTGGAATTGGACCCATAATGGCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp GCAAAGCAGCGTATATTGTCTGTGAGCTCTGTGCCCTaGGATCGGACCGTAGGCATCCAGCACTGGGGAATC +
Preference number: 3 (lower is better)
Translates to: AKQRILSVSSVP*DRTVGIQHWGI
Trigger: GATTCCCCAGTGCTGGATGCCTACGGTCCGATCTCAGGGCACAGAGCTCACAGACAATATACGCTGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp GACAAGAAGAGAAAAATGCAGGTTAGAGAACAGGCCTaGACCAGTGGAGGGCTTCCTACCCCTGCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: DKKRKMQVREQA*TSGGLPTPAAP
Trigger: GGGAGCTGCAGGGGTAGGAAGCCCTCCACTGGTGCAGGCCTGTTCTCTAACCTGCATTTTTCTCTTCTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CCGGCTCTGGGTCTGGAGTCACCCAACTGGTCGAAATaGATTTGTGACGGCTCCGTTTCTTCTCGGAATCCT +
Preference number: 3 (lower is better)
Translates to: PALGLESPNWSK*ICDGSVSSRNP
Trigger: AGGATTCCGAGAAGAAACGGAGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp ACAACTCAGCTGGGATTGGGGGTGTCGAAAGCCACTTaGAGTTGGCCAAGAGACTCCCCAATCCCATTGCCA +
Preference number: 3 (lower is better)
Translates to: TTQLGLGVSKAT*SWPRDSPIPLP
Trigger: TGGCAATGGGATTGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CTCCGCTCTTGGACACGTCTGGTGACTTTCCTTTGCTaGCTGGAGAGGTGCTGGTGGTGTCATTGGGTAGTT +
Preference number: 3 (lower is better)
Translates to: LRSWTRLVTFLC*LERCWWCHWVV
Trigger: AACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGAGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp CGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTaGGTCTGGAGTCACCCAACTGGTCGAAATGCATTT +
Preference number: 3 (lower is better)
Translates to: REDRKQVLSARL*VWSHPTGRNAF
Trigger: AAATGCATTTCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTGTCTTGAGTCGTATTaGTGCATCAGCTGTGGCCCC +
Preference number: 3 (lower is better)
Translates to: VLFIARVGYGPPSGSRRACLESY*CISCGP
Trigger: GGGGCCACAGCTGATGCACAAATACGACTCAAGACA...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp GGGTCTGGAGTCACCCAACTGGTCGAAATGCATTTGTaGCGGCTCCGTTTCTTCTCGGAATCCTTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: GSGVTQLVEMHL*RLRFFSESFCF
Trigger: GAAGCAGAAGGATTCCGAGAAGAAACGGAGCCGTCACAAATGCATTTCGACCAGTTGGGTGACTCCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGGCCCCCACTCTCCTTaGGCAGCTGGGGCACAGGAC +
Preference number: 3 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKGPHSP*AAGAQD
Trigger: GTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGCC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR-3UTR CAA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACTTTCAACTTCTTGTCTaGAGTCGTATTTGTGCATCA +
Preference number: 3 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDFQLLV*SRICAS
Trigger: TGATGCACAAATACGACTCAAGACAAGAAGTTGAAA...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp TGGCTAACGTGTGGTGACCTTGCAGTGGCCTTGGGCTaGAGACTTTGTCATATTCTATTGGCTCAGTTAGGC +
Preference number: 3 (lower is better)
Translates to: WLTCGDLAVALG*RLCHILLAQLG
Trigger: GCCTAACTGAGCCAATAGAATATGACAAAGTCTGCAGCCCAAGGCCACTGCAAGGTCACCACACGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR TCA 72 bp TCCGTGCTCATCTTGTTCCATTTCAACTTCTTGTCTTaGGTCGTATTTGTGCATCAGCTGTGGCCCCGGGGA +
Preference number: 3 (lower is better)
Translates to: SVLILFHFNFLS*VVFVHQLWPRG
Trigger: TCCCCGGGGCCACAGCTGATGCACAAATACGACTCAAGACAAGAAGTTGAAATGGAACAAGATGAGCACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR-3UTR CAA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTTCACTGCCTTTCTGTaGTTGATTTTCGGCAACAAA +
Preference number: 3 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAFTAFL*LIFGNK
Trigger: TTTGTTGCCGAAAATCAACAACAGAAAGGCAGTGAA...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR GCA 72 bp CTCCAAAGAGAAAGGCTCAGGCATCCCTCTCATCCGTaGTCATCTTGTTCCATTTCAACTTCTTGTCTTGAG +
Preference number: 3 (lower is better)
Translates to: LQRERLRHPSHP*SSCSISTSCLE
Trigger: CTCAAGACAAGAAGTTGAAATGGAACAAGATGAGCACGGATGAGAGGGATGCCTGAGCCTTTCTCTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CCA 72 bp TTGAATAAAAGTTTTATTTATTGCACGAGTTGGGTATaGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCC +
Preference number: 3 (lower is better)
Translates to: LNKSFIYCTSWV*TSFRFPACVFA
Trigger: GGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAACTTTTATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGGGCTCCCCCACGTTGGAGCGCCAGTaGCCGCGCTGGGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SHQPAAAGWGRWESRGSPTLERQ*PRWAAL
Trigger: GAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGT...GGGGGAGCCCCGGCTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GCGGGCGACACCGTGAAGCGCGAGAAGGGAGCGGGCGTGGGCGTGGGCGCAGCCCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AGDTVKREKGAGVGVGAALRQVG*VLVPLR
Trigger: GCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAG...GGCTGCGCCCACGCCCACGCCCGCTCCCTTCTCGCGCTTCACGGTGTCGCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp AGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGGGCTCCCCCAGAAGGACGACGACATaGCCGGGCCAGCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SHQPAAAGWGRWESRGSPRRTTT*PGQRPA
Trigger: CGCCGGCCGCTGGCCCGGCCATGTCGTCGTCCTTCT...GGGGGAGCCCCGGCTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCCTGCAGGCGTGCGGTaGGGCCAGGGCTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQPAGVR*GQGSAW
Trigger: CCACGCTGAGCCCTGGCCGCACCGCACGCCTGCAGG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGGGGGAGCCATCAGCCTaGTGCGGCCGGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQGEPSA*CGRLGA
Trigger: CGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCC...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGGGGGTCGGGAGCCATaGACTCCGCCACCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPGGREP*TPPPGS
Trigger: GCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCC...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
74% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCGTCCTGGTCCGCGGTaGCAGGTGGACTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQRPGPR*QVDWGR
Trigger: GCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGCTGGGAGGTTGTGGCTaGCCTGCCCCGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQALGGCG*PAPPHP
Trigger: GGGGTGGGGCGGGGCAGGCCAGCCACAACCTCCCAG...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCTCCGGCCTCCTGGCCTaGAGGCCGTCGCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGSGLLA*RPSLDV
Trigger: CACGTCCAGCGACGGCCTGCAGGCCAGGAGGCCGGA...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGTCCGGCCTCCTGGCCTaGAGGCCGTCGCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQSGLLA*RPSLDV
Trigger: CACGTCCAGCGACGGCCTGCAGGCCAGGAGGCCGGA...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp AGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGGGCTCCCCCCAGAGGGGAGCTGCCTaGACGGTCCTGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SHQPAAAGWGRWESRGSPQRGAA*TVLPRA
Trigger: TGCCCTTGGCAGGACCGTGCAGGCAGCTCCCCTCTG...GGGGGAGCCCCGGCTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGGGGCGTCGGGGGCACTaGCCTCCTCCGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAGRRGH*PPPREV
Trigger: CACTTCCCTCGGAGGAGGCCAGTGCCCCCGACGCCC...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGTCCTCACCCGGCCCCTaGAGGGGCTGCCCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GVGSHGLRHPAAPQVALESSPGP*RGCPLG
Trigger: GCCAAGCGGGCAGCCCCTCCAGGGGCCGGGTGAGGA...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLLRQVG*VLVPLR
Trigger: GCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAG...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTTCACAGGCCATGCGCTaGAGGGTCCGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: HALQGPGVGSHGLRHPAASQAMR*RVRGSG
Trigger: TCCCGACCCCCGGACCCTGCAGCGCATGGCCTGTGA...AGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp CATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCACCTCACAGGCCATaGGCTGCAGGGTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: HALQGPGVGSHGLRHPAAPPHRP*AAGSGG
Trigger: ACCCCCGGACCCTGCAGCGCATGGCCTGTGAGGTGG...AGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGGCGAGGCGGCGGTGCTaGCGTCAGAGTCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAARRRC*RQSRRP
Trigger: AGGACGACGACTCTGACGGCAGCACCGCCGCCTCGC...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTGTCACCTCGGCGCACTaGGCCAGGCACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HALQGPGVGSHGLRHPAAVTSAH*ARHWSR
Trigger: CCTGCTCCAGTGCCTGGCCCAGTGCGCCGAGGTGAC...AGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp AGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGGGCTCCCCCCCCCGAGCTCCCGGGTaGGGCTTTCCTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SHQPAAAGWGRWESRGSPPRAPG*GFPGQR
Trigger: TCTTTGACCAGGAAAGCCCCACCCGGGAGCTCGGGG...GGGGGAGCCCCGGCTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCT
72% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGACTGGAGCCAGGTGTTaGGCCCACTGGGGACCGGGC +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQTGARC*AHWGPG
Trigger: GCCCGGTCCCCAGTGGGCCCAACACCTGGCTCCAGT...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCGCCAGGACAGCTCGCTaGGCGGGGCGCCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCARTAR*AGRRRG
Trigger: ACCCCGACGGCGCCCCGCTCAGCGAGCTGTCCTGGC...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR TCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGCCAGGACAGCTCGCTaGGCGGGGCGCCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTARTAR*AGRRRG
Trigger: ACCCCGACGGCGCCCCGCTCAGCGAGCTGTCCTGGC...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR TCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCTTGAGGAGCTGCACTaGGCGCCCAGGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQLEELH*APRLLG
Trigger: GCCAAGCAGCCTGGGCGCTCAGTGCAGCTCCTCAAG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCGTCGGTGAAGATGCCTaGGGTGGCCTCGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGVGEDA*GGLGRV
Trigger: GACACGGCCGAGGCCACCTCAGGCATCTTCACCGAC...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGGCAGGCTGGGCATCTTaGGCAGGCTGCGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQAGWAS*AGCAGC
Trigger: GCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGC...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCTCCTGCACCAGGTGTaGTCTGTCCGCCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQLLHQV*SVRPRA
Trigger: GGCCCTTGGGCGGACAGATCACACCTGGTGCAGGAG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCGTCGGGCCCGTTCTGTaGTGCCGTGGCCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VSDSRLGILSRLRRLRALVGPVL*CRGRGA
Trigger: GGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGAC...GAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp TGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCAGGTACAGGAGGCTGTaGCGGCCCACGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: CAAGSGGREPWTPPPGSSRYRRL*RPTSVD
Trigger: GTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT...GGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGTCGGCTGTGGGCCGCTaGTCGGGCTGCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EPFGEPSACCGRLGALGESAVGR*SGCSQQ
Trigger: CTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGA...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCGAGGCCCGTGGGGTCTaGTTTGGACTGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLEARGV*FGLGQP
Trigger: GGGCTGCCCCAGTCCAAAGCAGACCCCACGGGCCTC...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGGAGCCATCAGCCTGCTaGGGCCGGTTGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EPFGEPSACCGRLGALGEEPSAC*GRLGAL
Trigger: CAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTC...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGCATCCAGGCCCCGGCTaGCTGGTCTTGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAHPGPG*LVLPHL
Trigger: CAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATG...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGAGAGCAGGGGCCGCTaGTTCCCAGAAAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: CAAGSGGREPWTPPPGSSESRGR*FPEKPR
Trigger: CCGTGGCTTTTCTGGGAAGCAGCGGCCCCTGCTCTC...GGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTGCACCTCCTCGGCTGTaGGCCGCTGCTCGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSAPPRL*AAARAA
Trigger: TGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGC...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACCCACATCCGGCCTCCTaGCCTGCAGGCCGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHPHPAS*PAGRRW
Trigger: CCAGCGACGGCCTGCAGGCCAGGAGGCCGGATGTGG...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGGGCTCCCCCGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATC +
Preference number: 4 (lower is better)
Translates to: SHQPAAAGWGRWESRGSPDEFCL*GGAWPI
Trigger: GATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC...GGGGGAGCCCCGGCTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTTGGCCAGCTGGTGGCTaGGAGGGGAGCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSWPAGG*EGSLAA
Trigger: GGCAGCCAGGCTCCCCTCCCAGCCACCAGCTGGCCA...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGGGTGTGGGCCTGGCCTaGTGGGGGAGCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAGVGLA*WGSHQT
Trigger: AGTTTGGTGGCTCCCCCACCAGGCCAGGCCCACACC...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCTCGTGCCCTGCACAGTaGCCAGCACCCAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CAAGSGGREPWTPPPGSSSCPAQ*PAPSSS
Trigger: GGAACTGCTGGGTGCTGGCCACTGTGCAGGGCACGA...GGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR CAA 72 bp GGTGCGGCCGGGTCTAGGGCCATGGCGAAGGCTGCCTaGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCG +
Preference number: 4 (lower is better)
Translates to: GAAGSRAMAKAA*AVISGKSSSHA
Trigger: CGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGCCGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CAA 72 bp GGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTaGCCGTGGGGGCCCCGCCTTGTGCCCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GYGPPSGSRRAS*PWGPRLVPTSA
Trigger: GGCAGAGGTGGGCACAAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCACGGGCTGTGCGCGCTaGGCACCGGAACCACGCCCG +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCTGCAR*APEPRP
Trigger: CGGGCGTGGTTCCGGTGCTCAGCGCGCACAGCCCGT...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGTCCGCAGGTAGCCCTTaGGGTCCCCAGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GVGSHGLRHPAAPQVALESAGSP*GPQLRD
Trigger: GTCCCTCAGCTGGGGACCTCAAGGGCTACCTGCGGA...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCGTGGCCGGGGAGCCCTaGGCCAGGTCGGCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSVAGEP*ARSAAY
Trigger: GTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCAC...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCACGCTGGCACTAGCCTaGAGCTCCTTCACCACCACC +
Preference number: 4 (lower is better)
Translates to: CAAGSGGREPWTPPPGSSTLALA*SSFTTT
Trigger: GGTGGTGGTGAAGGAGCTGCAGGCTAGTGCCAGCGT...GGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACTCACAGGCCATGCGCTaGAGGGTCCGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHSQAMR*RVRGSG
Trigger: TCCCGACCCCCGGACCCTGCAGCGCATGGCCTGTGA...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTGCGAGGCGGCGGTGCTaGCGTCAGAGTCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSARRRC*RQSRRP
Trigger: AGGACGACGACTCTGACGGCAGCACCGCCGCCTCGC...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCCCGCGCCAAGCTTCTaGGAGGGTAGTGGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSPAPSF*EGSGRR
Trigger: GCGGCGACCACTACCCTCGCAGAAGCTTGGCGCGGG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: EPFGEPSACCGRLGALGEHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCCCTGATCTTTTGGGCTaGCCACCGTGGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGPDLLG*PPWPQR
Trigger: CCGCTGTGGCCACGGTGGGCAGCCCAAAAGATCAGG...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGACCTCCGCTGACTCCTaGAGGCACTGGGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQATSADS*RHWGAL
Trigger: CAGAGCTCCCCAGTGCCTGCAGGAGTCAGCGGAGGT...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCCCCGCTTCCGGGGTCTaGCCCAGGACTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPPASGV*PRTPGW
Trigger: CCACCCAGGAGTCCTGGGGCAGACCCCGGAAGCGGG...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCAGGTTGTGGCTGGCCTaGCCCGCCCCACCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSRLWLA*PAPPRP
Trigger: AGGGCGGGGTGGGGCGGGGCAGGCCAGCCACAACCT...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCACCCCGCTGCTCAGACGGCTaGCCAGTGCTCGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AALAVISGKSSSHANPPPRCSDG*PVLGRP
Trigger: GGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGCG...GGGTGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570932.5
CDS-3UTR CCA 90 bp GCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGGCACCTCCTCGGCTGTaGGCCGCTGCTCGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGSRAMAKAALAVISGKSAPPRL*AAARAA
Trigger: TGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGC...CGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCTCGTCGCCGTCCGCGTaGAAGCCGTCGCCCGCGAAC +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPSSPSA*KPSPAN
Trigger: GTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGA...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCGGTGGCAGGTGGACTaGGGGCGCAGCCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTRWQVD*GRSRRS
Trigger: ACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGAGGCCGCACCTTGGCTaGGCCTTGGGGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: AGSRAMAKAALAVISGKSRPHLG*ALGLRR
Trigger: CCTCCGGAGCCCCAAGGCCCAGCCAAGGTGCGGCCT...CGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGGCCCAGGCCGCACCTTaGCTGGGCCTTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTAQAAP*LGLGAP
Trigger: CGGAGCCCCAAGGCCCAGCCAAGGTGCGGCCTGGGC...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCACCAGCTGGCAACCTTaGGGCCACCATCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CAAGSGGREPWTPPPGSSTSWQP*GHHQEP
Trigger: TGGCTCCTGATGGTGGCCCCAAGGTTGCCAGCTGGT...GGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp TGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGTCCCTAGCACCAGCTaGCAACCTTGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: CAAGSGGREPWTPPPGSSVPSTS*QPWGHH
Trigger: ATGGTGGCCCCAAGGTTGCCAGCTGGTGCTAGGGAC...GGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp TGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGCAGGAGTCCCTTaGCCAGTGGGCAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: CAAGSGGREPWTPPPGSSAAGVP*PVGRTP
Trigger: TGGAGTTCTGCCCACTGGCCAAGGGACTCCTGCTGC...GGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGCGTGTCCCCCAGGGCTaGGCTGGACTGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GVGSHGLRHPAAPQVALERVPQG*AGLKAS
Trigger: GGAAGCCTTCAGTCCAGCCCAGCCCTGGGGGACACG...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR TCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGACGGGCTGTGCGCGCTaGGCACCGGAACCACGCCCG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLTGCAR*APEPRP
Trigger: CGGGCGTGGTTCCGGTGCTCAGCGCGCACAGCCCGT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACACGGGCTGTGCGCGCTaGGCACCGGAACCACGCCCG +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHTGCAR*APEPRP
Trigger: CGGGCGTGGTTCCGGTGCTCAGCGCGCACAGCCCGT...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCTTCTTCTCTGGGCCTaGGGTGGCCTCGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSLLLWA*GGLGLS
Trigger: GCTGAGGCCGAGGCCACCTCAGGCCCAGAGAAGAAG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGGCAGGCTGGGCATCTTaGGCAGGCTGCGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: EPFGEPSACCGRLGALGEAGWAS*AGCAGC
Trigger: GCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGC...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGTCAGACACGTGCGTaGTGGAGAAGCGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGSQTRA*WRSGTW
Trigger: CCACGTCCCGCTTCTCCATCACGCACGTGTCTGACT...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCTGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGWGRGT*ICCQQP
Trigger: TGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCA...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCAGCGGAGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCGGGCCCGTTCTGTGCTaGCGTGGCCGGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: AAELLVRLVAVLTVLLLLGPVLC*RGRGAL
Trigger: CAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCC...GAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCTCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGTCGGGCCCGTTCTGTaGTGCCGTGGCCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTVGPVL*CRGRGA
Trigger: GGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGAC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAGTCGGGCCCGTTCTGTaGTGCCGTGGCCGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPVGPVL*CRGRGA
Trigger: GGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGAC...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ACGTGCGTGATGGAGAAGCGGGACGTGGGCGCGGGCGACACCGTGAAGCGCGAGTCCGACAGGGTCAGCTaGAGCTGGGGCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TCVMEKRDVGAGDTVKRESDRVS*SWGLGS
Trigger: GCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGA...CTCGCGCTTCACGGTGTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGGGGCGCACAGCTCCTaGAGGCGTGCGGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWGAHSS*RRAVRP
Trigger: TGGCCGCACCGCACGCCTGCAGGAGCTGTGCGCCCC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTGCGAGGCGGCGGTGCTaGCGTCAGAGTCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GQQAGHLEQAAQVARALAARRRC*RQSRRP
Trigger: AGGACGACGACTCTGACGGCAGCACCGCCGCCTCGC...AGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGACGTTGGAGCGCCAGTaGCCGCGCTGGGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLTLERQ*PRWAAL
Trigger: GAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTGAGGCCCGTGGGGTCTaGTTTGGACTGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GQQAGHLEQAAQVARALAEARGV*FGLGQP
Trigger: GGGCTGCCCCAGTCCAAAGCAGACCCCACGGGCCTC...AGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCGGGAGAGCTGCTGCTaGCATTCAGGGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQRESCC*HSGQKP
Trigger: TGGCTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCCCTCGGGAGAGCTGCTaGTGCCATTCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGPRESC*CHSGQK
Trigger: CTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGG...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCTGTCCTCATCCTCACTaGTGGGTGCCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGCPHPH*WVPPPR
Trigger: CCGAGGTGGAGGCACCCAGCAGTGAGGATGAGGACA...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTCCGGCCTCCTGGCCTaGAGGCCGTCGCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTSGLLA*RPSLDV
Trigger: CACGTCCAGCGACGGCCTGCAGGCCAGGAGGCCGGA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTCCAGCGCTCGCGGCTaGCCTCCAGAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTSSARG*PPEGPV
Trigger: CACTGGCCCCTCTGGAGGGCAGCCGCGAGCGCTGGA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTGCAGGCTGCGCAGGTTaGGCGCGCTCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GQQAGHLEQAAQVARALAAGCAG*ARSGSQ
Trigger: CTGAGAGCCAGAGCGCGCGCAACCTGCGCAGCCTGC...AGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCTGCCGGATGGGGCATaGGGGTCCTCCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTLPDGA*GSSEAR
Trigger: CCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAG...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GACACGTGCGTGATGGAGAAGCGGGACGTGGGCGCGGGCGACACCGTGAAGCGCCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: DTCVMEKRDVGAGDTVKRPRATP*PEPPGT
Trigger: GGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG...GCGCTTCACGGTGTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACCCTGCCACCGCCATCTaGCCCAGCAGCCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHPATAI*PSSLGP
Trigger: AGGTCCAAGGCTGCTGGGGCAGATGGCGGTGGCAGG...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGGGTCACCAGCAGAGTaGCCGCTGGCAGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTGSPAE*PLAGGG
Trigger: GCCCCCACCTGCCAGCGGGCACTCTGCTGGTGACCC...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCAGAAGGACGACGACATaGCCGGGCCAGCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSRRTTT*PGQRPA
Trigger: CGCCGGCCGCTGGCCCGGCCATGTCGTCGTCCTTCT...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR CCA 90 bp CATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCACTGGGCCAGGCACTaGAGCAGGTTGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HALQGPGVGSHGLRHPAAHWARH*SRLLCF
Trigger: GAAGCACAGCAACCTGCTCCAGTGCCTGGCCCAGTG...AGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp AGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCCTCCGGCCGTCCTGGTCCGCGGTaGCAGGTGGACTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SSSSDSSLSSLSSSSSSGRPGPR*QVDWGR
Trigger: GCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACG...GCCGGAGGAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTGGGGTCCCAGGACTCTaGACAGCGGCTGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSGVPGL*TAAAAV
Trigger: AACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCC...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCGCCGGGGCAGCAGCCTaGCTCCTGGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAAGAAA*LLGRGC
Trigger: GCAGCCTCTGCCCAGGAGCCAGGCTGCTGCCCCGGC...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGGGCTCCGGAGGCTCTaGGACCAGGCCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHGLRRL*DQARGA
Trigger: TGCCCCTCGGGCCTGGTCCCAGAGCCTCCGGAGCCC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGAGGCCGCACCTTGGCTaGGCCTTGGGGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTRPHLG*ALGLRR
Trigger: CCTCCGGAGCCCCAAGGCCCAGCCAAGGTGCGGCCT...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGCCCAGGCCGCACCTTaGCTGGGCCTTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVAQAAP*LGLGAP
Trigger: CGGAGCCCCAAGGCCCAGCCAAGGTGCGGCCTGGGC...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGAGGTTGCGCGCGCTCTaGCTCTCAGCCACCACCACG +
Preference number: 4 (lower is better)
Translates to: EPFGEPSACCGRLGALGERLRAL*LSATTT
Trigger: CGTGGTGGTGGCTGAGAGCCAGAGCGCGCGCAACCT...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTGCCCCCACTCTCCTTTaGCAGCTGGGGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSAPTLL*QLGHRT
Trigger: GGTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGC...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACACCCCCATGCCAGGGCTaGGCTGGACGCTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTPPCQG*AGRSAT
Trigger: CGTGGCAGAGCGTCCAGCCCAGCCCTGGCATGGGGG...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGCTGTGCTGTCACCCTTaGAGCTGCCTGACATCCCCC +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQALCCHP*SCLTSP
Trigger: GGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAG...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGCCATCTGGGAGTCTaGGAGCCTTCCGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLRHLGV*EPSADL
Trigger: CAGGTCTGCGGAAGGCTCCCAGACTCCCAGATGGCG...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCCCTCGGCTGTGGTCTaGGCCAGATCTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQPSAVV*ARSRTL
Trigger: AAGGGTCCTAGATCTGGCCCAGACCACAGCCGAGGG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTGTCATGCCCCAGCTTTaGGCCCTGGGAAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAVMPQL*ALGRGP
Trigger: AGGCCCCCTTCCCAGGGCCCAAAGCTGGGGCATGAC...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCGCCTGCCTCTCACTCTaGGTGCTGGGCCTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGACLSL*VLGLLY
Trigger: GTAGAGAAGGCCCAGCACCCAGAGTGAGAGGCAGGC...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGAGGGGCTGCCCGCTTaGCCTTTTCTGGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: LQGPGVGSHGLRHPAAPQEGLPA*PFLGNC
Trigger: ACAGTTTCCCAGAAAAGGCCAAGCGGGCAGCCCCTC...CTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR TCA 90 bp CTCTTCGCTGTCCTCGCTAGGCTCCTGGACGCTGTAGCAGCGGAGCTCCTCGTCGGGGCTTGGGCAGCTTaGGCTGCTGCTCCCGGACCG +
Preference number: 4 (lower is better)
Translates to: LFAVLARLLDAVAAELLVGAWAA*AAAPGP
Trigger: CGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCC...GACGAGGAGCTCCGCTGCTACAGCGTCCAGGAGCCTAGCGAGGACAGCGAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR TCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGTGGGGCCGGCCCTaGCAACAGTCCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWLWGRP*QQSWGP
Trigger: GGGCCCCCAGGACTGTTGTCAGGGCCGGCCCCACAA...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGTCTGGAGAAGGTGCCTaGAGCCACTGGGATAGCCCG +
Preference number: 4 (lower is better)
Translates to: GVGSHGLRHPAAPQVALESGEGA*SHWDSP
Trigger: CGGGCTATCCCAGTGGCTTCAGGCACCTTCTCCAGA...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGTGGACTTGAGGAGCTaGACTGAGCGCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHVDLRS*TERPGC
Trigger: GCAGCCTGGGCGCTCAGTGCAGCTCCTCAAGTCCAC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGACCTCCTCCAGGAACTaGATCTGCTCCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPTSSRN*ICSCTL
Trigger: CAGCGTGCAGGAGCAGATGCAGTTCCTGGAGGAGGT...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCCCACGACGAGCAGGTTaGTATGCACCTCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGPRRAG*YAPRPP
Trigger: TGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGG...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCAGCTCCTGCAGGCGTaGGGTGCGGCCAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDQLLQA*GAARAQ
Trigger: CTGAGCCCTGGCCGCACCGCACGCCTGCAGGAGCTG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCCAGCGAGGCGGCGGTaGTGCCGTCAGAGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTPARRR*CRQSRR
Trigger: ACGACGACTCTGACGGCAGCACCGCCGCCTCGCTGG...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCGGCCACGCCCCAGTCTaGATCCTCCGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSGHAPV*ILRSSL
Trigger: GAGGGAGGAGCGGAGGATGCAGACTGGGGCGTGGCC...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAGGCCACGCCCCAGTCTaGATCCTCCGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTGHAPV*ILRSSL
Trigger: GAGGGAGGAGCGGAGGATGCAGACTGGGGCGTGGCC...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCCACCTCGGGAGAGCTaGTGCTGCCATTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSPPRES*CCHSGQ
Trigger: CTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGGTGG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACTCGGGGGTCCCCACCTaGTTCTGCAGAGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHSGVPT*FCRERK
Trigger: CTTCCGCTCTCTGCAGAAGCAGGTGGGGACCCCCGA...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGTCCAGCGCTCGCGGCTaGCCTCCAGAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVSSARG*PPEGPV
Trigger: CACTGGCCCCTCTGGAGGGCAGCCGCGAGCGCTGGA...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGGCCTGAGACAGACCTaGTCAGACGGCTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHGLRQT*SDGCPV
Trigger: CACTGGGCAGCCGTCTGAGCAGGTCTGTCTCAGGCC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGAGCCATCAGCCTGCTaGGGCCGGTTGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWEPSAC*GRLGAL
Trigger: CAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCGAGCCATCAGCCTGCTaGGGCCGGTTGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAEPSAC*GRLGAL
Trigger: CAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTC...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTTGGGGGAGCCATCAGCCTaGTGCGGCCGGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: AFLCREHPGPGCLVLPHLGEPSA*CGRLGA
Trigger: CGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCC...CAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGTCCGAGTCAGACACGTaGGTGATGGAGAAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQSESDT*VMEKRD
Trigger: GTCCCGCTTCTCCATCACGCACGTGTCTGACTCGGA...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTCAGAGGGGAGCTGCCTaGACGGTCCTGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GQQAGHLEQAAQVARALAQRGAA*TVLPRA
Trigger: TGCCCTTGGCAGGACCGTGCAGGCAGCTCCCCTCTG...AGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGAAATATTCCCTGTGCTaGCCTGCCCCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQKYSLC*PAPSST
Trigger: GGTGGAGCTGGGGGCAGGGCAGCACAGGGAATATTT...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCATCCAGAACCTTGCTaGCAGGGCCTCCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAHPEPC*QGLPAR
Trigger: GCGAGCTGGGAGGCCCTGGCAGCAAGGTTCTGGATG...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCGCCCACCCCAGGGTTTaGTTCCGGCTGCCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPAHPRV*FRLPVP
Trigger: AGGCACAGGCAGCCGGAAGCAAACCCTGGGGTGGGC...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGGCTCTGGCTGGCTGTaGCCGGGGCTCCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTGSGWL*PGLLSL
Trigger: CAGTGAGAGGAGCCCCGGGCACAGCCAGCCAGAGCC...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCGTTCTGTGCTGCCGTaGCCGGGGAGCCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWRSVLP*PGSPAP
Trigger: TGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGTCCTTCACCACCACCTaGGCACTGCTGATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPSFTTT*ALLMPE
Trigger: CTCTGGCATCAGCAGTGCCCAGGTGGTGGTGAAGGA...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGTCGACGGGTGGCCCGTaGCCCAGCAGCGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVSTGGP*PSSGSM
Trigger: CATGGAGCCGCTGCTGGGCCACGGGCCACCCGTCGA...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGTCGACGGGTGGCCCGTaGCCCAGCAGCGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLSTGGP*PSSGSM
Trigger: CATGGAGCCGCTGCTGGGCCACGGGCCACCCGTCGA...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTAGGGGACGTGCCCAGTaGGTCCTCGAAGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QAPSRESQSPSCVPTPSARGRAQ*VLEEGR
Trigger: CCTGCCTTCTTCGAGGACCCACTGGGCACGTCCCCT...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACTGTTGGCTGACACGTTaGAGCGCCAGTGCCCGCGCT +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHCWLTR*SASARA
Trigger: AGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACA...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCTGCCGCTGTTGTTGTTaGCTGACACGTTGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGCRCCC*LTRWSA
Trigger: GGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCA...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGGGGTCTGCTTTGGACTaGGGCAGCCCTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: AGSRAMAKAALAVISGKSGSALD*GSPQRG
Trigger: GCCACGCTGAGGGCTGCCCCAGTCCAAAGCAGACCC...CGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGGCGTCGGGGGCACTaGCCTCCTCCGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLGRRGH*PPPREV
Trigger: CACTTCCCTCGGAGGAGGCCAGTGCCCCCGACGCCC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTGCCCAGGCCGCACCTTaGCTGGGCCTTGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATAQAAP*LGLGAP
Trigger: CGGAGCCCCAAGGCCCAGCCAAGGTGCGGCCTGGGC...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCGGGTCTAGGGCCATaGCGAAGGCTGCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCPGLGP*RRLPWP
Trigger: CGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGG...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCCGGGTCTAGGGCCATaGCGAAGGCTGCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTPGLGP*RRLPWP
Trigger: CGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCTCTGGGGCGGAGCATaGCCGATCTACCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSLWGGA*PIYHPG
Trigger: CCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTGTGCCCGCTGGCAGGTaGGGGCTTCCCCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVAVPAGR*GLPRFR
Trigger: CCGGAAGCGGGGAAGCCCCCACCTGCCAGCGGGCAC...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCACAGCAGAGTGCCCGCTaGCAGGTGGGGGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPQQSAR*QVGASP
Trigger: CGGGGAAGCCCCCACCTGCCAGCGGGCACTCTGCTG...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTCCCTGGGTGTGGGCCTaGCCTGGTGGGGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTPWVWA*PGGGAT
Trigger: GGTGGCTCCCCCACCAGGCCAGGCCCACACCCAGGG...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCCCCTGCAGCTCCCCGTaGGGTCCAGGCAAGCGATGT +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPPCSSP*GPGKRC
Trigger: ACATCGCTTGCCTGGACCCCACGGGGAGCTGCAGGG...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGCAGGAGGTGGGGCCTaGCACGTGTCCTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVAGGGA*HVSSGR
Trigger: CCTGCCGGAGGACACGTGCCAGGCCCCACCTCCTGC...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACCCCAGCTTTGGGCCCTaGGAAGGGGGCCTTGGAATG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHPSFGP*EGGLGM
Trigger: CATTCCAAGGCCCCCTTCCCAGGGCCCAAAGCTGGG...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCCCTCCCGGAAGCTTGTaGGCTCTGGCTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPPPGSL*ALAGCA
Trigger: GGCACAGCCAGCCAGAGCCCACAAGCTTCCGGGAGG...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTGAGTCCCTTGGCCAGTaGGCAGAACTCCATCACCAG +
Preference number: 4 (lower is better)
Translates to: HALQGPGVGSHGLRHPAAESLGQ*AELHHQ
Trigger: CTGGTGATGGAGTTCTGCCCACTGGCCAAGGGACTC...AGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR CAA 72 bp ACGCGAACCCACCACCCTCTTCCGCTGTGGAGCCATTaGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TRTHHPLPLWSH*GSHQPAAAGWG
Trigger: CCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCGGAAGAGGGTGGTGGGTTCGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CAA 72 bp GCAGCTGGACGGAACCCTGCCTGCCCACCCCAGGGTTaGCTTCCGGCTGCCTGTGCCTCTTCCCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AAGRNPACPPQG*LPAACASSRVA
Trigger: AGCTACCCGGGAAGAGGCACAGGCAGCCGGAAGCAAACCCTGGGGTGGGCAGGCAGGGTTCCGTCCAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCTCCGCAGGTAGCCCTTaGGGTCCCCCAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSSAGSP*GPPVGR
Trigger: TCTGCCCACTGGGGGACCTCAAGGGCTACCTGCGGA...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCCGTCAGGTCAGCCGTaGGCAGGCAGTTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHPSGQP*AGSSAG
Trigger: CCCTGCGGAACTGCCTGCTCACGGCTGACCTGACGG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCTTCTTCTCTGGGCCTaGGGTGGCCTCGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSLLLWA*GGLGLS
Trigger: GCTGAGGCCGAGGCCACCTCAGGCCCAGAGAAGAAG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCTTCTTCTCTGGGCCTaGGGTGGCCTCGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCLLLWA*GGLGLS
Trigger: GCTGAGGCCGAGGCCACCTCAGGCCCAGAGAAGAAG...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTTGCCCAGGCTGGTCTTaGACTCCAGGGCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSCPGWS*TPGLKW
Trigger: CCACTTGAGCCCTGGAGTTCAAGACCAGCCTGGGCA...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCAGCTCCCCCACACATaGCGCAGGCCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHQLPHT*RRPSSG
Trigger: CCCTGAGGAGGGCCTGCGTCATGTGTGGGGGAGCTG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCCAGGCCTCTGCATTCTaGGGCCAGCGCCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLQASAF*GQRPAR
Trigger: GCGGGCAGGGCGCTGGCCTCAGAATGCAGAGGCCTG...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATLRQVG*VLVPLR
Trigger: GCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGGTGGACTTGAGGAGCTaGACTGAGCGCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSRAMAKAALAVISGKSVDLRS*TERPGC
Trigger: GCAGCCTGGGCGCTCAGTGCAGCTCCTCAAGTCCAC...CGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCAGGTACAGGAGGCTGTaGCGGCCCACGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: VSDSRLGILSRLRRLRALRYRRL*RPTSVD
Trigger: GTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT...GAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGGCACTGGAGCAGGTTaGTGTGCTTCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHGTGAG*CASGPC
Trigger: ACAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGGTCGGCACTGGAGCAGGTTaGTGTGCTTCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VGSHGLRHPAAPQVALEVGTGAG*CASGPC
Trigger: ACAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCC...GACCTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCATCACAGGCCATGCGCTaGAGGGTCCGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPSQAMR*RVRGSG
Trigger: TCCCGACCCCCGGACCCTGCAGCGCATGGCCTGTGA...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGCCACCTCACAGGCCATaGGCTGCAGGGTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVPPHRP*AAGSGG
Trigger: ACCCCCGGACCCTGCAGCGCATGGCCTGTGAGGTGG...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGACGAGCAGGTTGCTATaGACCTCGTCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQTSRLL*TSSTSS
Trigger: AGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGT...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGGGCAGCTTGAGCTGCTaGTCCCGGACCGTGTACGCC +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTGSLSC*SRTVYA
Trigger: GGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCC...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCGGCAGCTTGAGCTGCTaGTCCCGGACCGTGTACGCC +
Preference number: 4 (lower is better)
Translates to: LGPWRRLPWPSSAGSRRPGSLSC*SRTVYA
Trigger: GGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCC...GGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCTTCAAACTCCTCCTCTaGTTCGGTGGCGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLFKLLL*FGGALG
Trigger: GCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAA...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAGAAGGTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCCCGTCGCCCGCGAACTaGTCCAGCAGCGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QKVSDSRLGILSRLRRLRPSPAN*SSSGKD
Trigger: GTCCTTCCCGCTGCTGGAGCAGTTCGCGGGCGACGG...GCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCCCGCGCCAAGCTTCTaGGAGGGTAGTGGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDPAPSF*EGSGRR
Trigger: GCGGCGACCACTACCCTCGCAGAAGCTTGGCGCGGG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCTCCTGGGCAGAGGCTaGCTGGAGCCCAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTLLGRG*LEPKQR
Trigger: CCTCTGCTTGGGCTCCAGGCAGCCTCTGCCCAGGAG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCAGACGGCTGCCCAGTaGTCGGCAGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGQTAAQ*SAGPAL
Trigger: CAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAACCTGCTCAGACGGCTaGCCAGTGCTCGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTTCSDG*PVLGRP
Trigger: GGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGGT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCAGGCTGCGCAGGTTaGGCGCGCTCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTAGCAG*ARSGSQ
Trigger: CTGAGAGCCAGAGCGCGCGCAACCTGCGCAGCCTGC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCGCAGGCTGCGCAGGTTaGGCGCGCTCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGAGCAG*ARSGSQ
Trigger: CTGAGAGCCAGAGCGCGCGCAACCTGCGCAGCCTGC...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGACACGGCCTTCTTCTTaGGTTCCAGGTCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQTRPSS*VPGPRR
Trigger: TCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGT...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGGGGAGCCATCAGCCTaGTGCGGCCGGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEGEPSA*CGRLGA
Trigger: CGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCC...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCCACCATCCTCGCTGCTaGCTGGCAGGGGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAHHPRC*LAGAPV
Trigger: CACCGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTG...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGGTCACCATCCTCGCTaGTGCCTGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTGHHPR*CLAGAP
Trigger: CGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTGACC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACAGCCCAGACGAATTCTaGCTCTGGGGCGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHSPDEF*LWGGAW
Trigger: CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCT...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCAGAGGGGAGCTGCCTaGACGGTCCTGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTQRGAA*TVLPRA
Trigger: TGCCCTTGGCAGGACCGTGCAGGCAGCTCCCCTCTG...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACACCCTCCACCGGGGTGTaGCGAGGACAGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTPSTGV*RGQWGG
Trigger: TCCTCCCCACTGTCCTCGGCACACCCCGGTGGAGGG...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAGCAGGGCGCTACCCCTaGGCCCCCACACACAGTAGG +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPAGRYP*APTHSR
Trigger: CCTACTGTGTGTGGGGGCGCAGGGGTAGCGCCCTGC...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAGCAGGAAGGGAGACCTaGAGGGCGCTACCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPAGRET*RALPLR
Trigger: GCGCAGGGGTAGCGCCCTGCAGGTCTCCCTTCCTGC...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCACCCCGCCCTGCCCTaGCCAGCCCACACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVHPALP*PAHTAG
Trigger: CCCAGCAGTGTGGGCTGGGCAGGGCAGGGCGGGGTG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGTCAGCAGGGTGCCAATaGTTAGACGCCATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQASAGCQ*LDAIWE
Trigger: CTCCCAGATGGCGTCTAAGCATTGGCACCCTGCTGA...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCCTCCTTGTGGGCCTaGTGTCCCAGCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCPSLWA*CPSQPW
Trigger: CCAAGGCTGGCTGGGACAGCAGGCCCACAAGGAGGG...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCTAGGAGGGCGGCTCTaGAAAGCCAGTGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSLGGRL*KASACI
Trigger: GATGCAGGCACTGGCTTTGCAGAGCCGCCCTCCTAG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCAGGAGCAGGCCCTCTaGCCTCATAGGGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTQEQAL*PHRGPL
Trigger: CAAGGGCCCCCTATGAGGGCAGAGGGCCTGCTCCTG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCCCGGCGTGCGTCTTTaGCGTGGGGGCCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVPGVRL*RGGPAL
Trigger: CAAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGGGAGACCTCCGTGAGTaGCAGGACGTACACGTCGGG +
Preference number: 4 (lower is better)
Translates to: AGSRAMAKAALAVISGKSGDLRE*QDVHVG
Trigger: CCCGACGTGTACGTCCTGCCACTCACGGAGGTCTCC...CGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCGTCACCTCGGCGCACTaGGCCAGGCACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGVTSAH*ARHWSR
Trigger: CCTGCTCCAGTGCCTGGCCCAGTGCGCCGAGGTGAC...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGGGGGGTCGGGAGCCATaGACTCCGCCACCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEGGREP*TPPPGS
Trigger: GCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCC...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTTCGTCGCCGTCCGCGTaGAAGCCGTCGCCCGCGAAC +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATSSPSA*KPSPAN
Trigger: GTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGA...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGCGTCCTGGTCCGCGGTaGCAGGTGGACTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPERPGPR*QVDWGR
Trigger: GCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACG...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCGGGGTCCCAGGACTCTaGACAGCGGCTGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSGVPGL*TAAAAV
Trigger: AACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCC...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCGGCTCTGCCTGCGGGTaGTCACCCCCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: LGPWRRLPWPSSAGSRRPGSACG*SPPLLA
Trigger: AGCCAGTAGTGGGGGTGACCACCCGCAGGCAGAGCC...GGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCCTCCGTGGCAAGCTTaGGCTCTGCCTGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTPPWQA*ALPAGG
Trigger: ACCACCCGCAGGCAGAGCCCAAGCTTGCCACGGAGG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCTGCCCTCAGCCTCCGTaGCAAGCTTGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPCPQPP*QAWALP
Trigger: AGGCAGAGCCCAAGCTTGCCACGGAGGCTGAGGGCA...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCTCCTCCGAGGGAAGTaGGGCTCCCTCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTLLRGK*GSLLGW
Trigger: CCATCCCAGGAGGGAGCCCCACTTCCCTCGGAGGAG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTCCTCATCCTCACTGCTaGGTGCCTCCACCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GQQAGHLEQAAQVARALAPHPHC*VPPPRE
Trigger: CTCCCGAGGTGGAGGCACCCAGCAGTGAGGATGAGG...AGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTTCAAGCTGCAGCAGTaGGGGCAGCACCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTFKLQQ*GQHLPG
Trigger: CCCGGGGAGGTGCTGCCCCCACTGCTGCAGCTTGAA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGGGGCTCCGGAGGCTCTaGGACCAGGCCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEGLRRL*DQARGA
Trigger: TGCCCCTCGGGCCTGGTCCCAGAGCCTCCGGAGCCC...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTTGGCGAAGGCTGCCTTaGCCGTCATCAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSWRRLP*PSSAGS
Trigger: ACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACTGGCGAAGGCTGCCTTaGCCGTCATCAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHWRRLP*PSSAGS
Trigger: ACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCTCCGCCTTCCACCCTaGGCCCAGGGACAGACAGAC +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCLRLPP*AQGQTD
Trigger: GTCTGTCTGTCCCTGGGCCCAGGGTGGAAGGCGGAG...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAGCCACGCTGTGTCCCTaGGTGTGGGCCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPATLCP*VWAWPG
Trigger: ACCAGGCCAGGCCCACACCCAGGGACACAGCGTGGC...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCTAACCTGCCTTCTCTaGATGCCCCCATGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QAPSRESQSPSCVPTPSALTCLL*MPPCQG
Trigger: GCCCTGGCATGGGGGCATCCAGAGAAGGCAGGTTAG...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCCTTTCCTTTGCTGGCTaGAGAGGTGCTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGLSFAG*RGAGGV
Trigger: GACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAG...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCCTTGTGGGCTCTGGCTaGCTGTGCCCGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTALVGSG*LCPGLL
Trigger: GAGGAGCCCCGGGCACAGCCAGCCAGAGCCCACAAG...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGAGGGCCCGGCTGCATaGCGGGGCCAGGGGTCCACT +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVEGPAA*RGQGST
Trigger: AGTGGACCCCTGGCCCCGCCATGCAGCCGGGCCCTC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCGCTCTGGCTGCAAGGAGACCTCCGTaGGTGGCAGGACGTACACGT +
Preference number: 4 (lower is better)
Translates to: GQQAGHLEQAAQVARALAARRPP*VAGRTR
Trigger: ACGTGTACGTCCTGCCACTCACGGAGGTCTCCTTGC...AGCCAGAGCGCGCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR TCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCTTGAGGAGCTGCACTaGGCGCCCAGGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDLEELH*APRLLG
Trigger: GCCAAGCAGCCTGGGCGCTCAGTGCAGCTCCTCAAG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCCACGTCTGTGGACTTaGGGAGCTGCACTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTPRLWT*GAALSA
Trigger: GGCGCTCAGTGCAGCTCCTCAAGTCCACAGACGTGG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTCCGCAGGTAGCCCTTaGGGTCCCCCAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWSAGSP*GPPVGR
Trigger: TCTGCCCACTGGGGGACCTCAAGGGCTACCTGCGGA...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTGGGCAGAGCATAGATaGGGGAGGCCGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWWAEHR*GRPGQQ
Trigger: CTGCTGCCCCGGCCTCCCTCATCTATGCTCTGCCCA...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGGGCAGAAGCCAGCTTaGTGGCAGACACCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTGQKPA*WQTPRH
Trigger: GTGGCGAGGTGTCTGCCATCAAGCTGGCTTCTGCCC...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCGGGCAGAAGCCAGCTTaGTGGCAGACACCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCGQKPA*WQTPRH
Trigger: GTGGCGAGGTGTCTGCCATCAAGCTGGCTTCTGCCC...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGTCGGTGAAGATGCCTaGGGTGGCCTCGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWVGEDA*GGLGRV
Trigger: GACACGGCCGAGGCCACCTCAGGCATCTTCACCGAC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACACGCTGGACGTGTCGGTaGAGATGCCTGAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTRWTCR*RCLRWP
Trigger: AGGCCACCTCAGGCATCTTCACCGACACGTCCAGCG...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCGCTGGACGTGTCGGTaGAGATGCCTGAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTRWTCR*RCLRWP
Trigger: AGGCCACCTCAGGCATCTTCACCGACACGTCCAGCG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGCCACCATCACTGGCTaGGGACGGGATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTATITG*GRDVQG
Trigger: TCCCTGGACATCCCGTCCTCAGCCAGTGATGGTGGC...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR TCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTAGAGCTGTTGCCTTCTaGTCTCAGCGGAACCGGGGT +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSRAVAF*SQRNRG
Trigger: ACCCCGGTTCCGCTGAGATCAGAAGGCAACAGCTCT...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGTTGTGGGGCCGGCCCTaGCAACAGTCCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPELWGRP*QQSWGP
Trigger: GGGCCCCCAGGACTGTTGTCAGGGCCGGCCCCACAA...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCAAAGAGGTAGACGGTaGCGTCGTCGAAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQQRGRR*RRRRRT
Trigger: TGTCCTTCTTCGACGACGTCACCGTCTACCTCTTTG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCCTCCGGCCGGCAGTCAGACACGTGCGTaGTGGAGAAGCGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: PRQTRRCPHCPPPPPPAGSQTRA*WRSGTW
Trigger: CCACGTCCCGCTTCTCCATCACGCACGTGTCTGACT...GCCGGCCGGAGGAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR TCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGAGCCTTGGGTACCCCTaGGTTAAGGGAGGACATTTG +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQSLGYP*VKGGHL
Trigger: CAAATGTCCTCCCTTAACTCAGGGGTACCCAAGGCT...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCGATTCGGGGCAGGAGTaGGAACCACGCGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCDSGQE*EPRGCT
Trigger: AGTGCAGCCGCGTGGTTCTCACTCCTGCCCCGAATC...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCTTGGACACGTCTGGTaGCTTTCCTTTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLLGHVW*LSFAGW
Trigger: CCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAG...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACTCCCCCAGGTCCCTCTaGGCTGAGGGGGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDSPRSL*AEGAEL
Trigger: CAGTTCAGCCCCCTCAGCTCAGAGGGACCTGGGGGA...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGGTCTCTGGGAAACTGTCCTaGGTCCCTAGCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGSHGLRHPAAPQVALEVSGKLS*VPSTSW
Trigger: CCAGCTGGTGCTAGGGACTCAGGACAGTTTCCCAGA...GACCTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp TGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCCGTCGGGGTCGAAGTaGGAGCTGAAGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WRRLPWPSSAGSRRPTRTPSGSK*ELKAKL
Trigger: CAGCTTCGCCTTCAGCTCGCACTTCGACCCCGACGG...GGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGTGGCCGGGGAGCCCTaGGCCAGGTCGGCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAVAGEP*ARSAAY
Trigger: GTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCAC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGACGCTGGCACTAGCCTaGAGCTCCTTCACCACCACC +
Preference number: 4 (lower is better)
Translates to: AGSRAMAKAALAVISGKSTLALA*SSFTTT
Trigger: GGTGGTGGTGAAGGAGCTGCAGGCTAGTGCCAGCGT...CGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACCTCCTCCAGGAACTaGATCTGCTCCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSTSSRN*ICSCTL
Trigger: CAGCGTGCAGGAGCAGATGCAGTTCCTGGAGGAGGT...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAGTGTACGCCAGCACCTaGTGGTCCGAGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTVYAST*WSECWG
Trigger: TCCCCAGCACTCGGACCAGCAGGTGCTGGCGTACAC...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCGGCCGCTGCTCGGGCTaGAGCCAGCAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAGRCSG*SQQNCI
Trigger: GATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCC...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCGTCGCCCGCGAACTaGTCCAGCAGCGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATPSPAN*SSSGKD
Trigger: GTCCTTCCCGCTGCTGGAGCAGTTCGCGGGCGACGG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCCTGCAGGCGTGCGGTaGGGCCAGGGCTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHPAGVR*GQGSAW
Trigger: CCACGCTGAGCCCTGGCCGCACCGCACGCCTGCAGG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGGGGCGCACAGCTCCTaGAGGCGTGCGGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAGAHSS*RRAVRP
Trigger: TGGCCGCACCGCACGCCTGCAGGAGCTGTGCGCCCC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCGAGGCCCGTGGGGTCTaGTTTGGACTGGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLEARGV*FGLGQP
Trigger: GGGCTGCCCCAGTCCAAAGCAGACCCCACGGGCCTC...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCAGACGGCTGCCCAGTaGTCGGCAGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVAQTAAQ*SAGPAL
Trigger: CAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTG...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTTGGCAGGCTGCGCAGGTTaGGCGCGCTCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AFLCREHPGPGCLVLPHLAGCAG*ARSGSQ
Trigger: CTGAGAGCCAGAGCGCGCGCAACCTGCGCAGCCTGC...CAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTGGTCACCATCCTCGCTaGTGCCTGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATGHHPR*CLAGAP
Trigger: CGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTGACC...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCTGCCGGATGGGGCATaGGGGTCCTCCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEELPDGA*GSSEAR
Trigger: CCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGCTGCCGGATGGGGCATaGGGGTCCTCCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPELPDGA*GSSEAR
Trigger: CCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAG...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGATCTTTTGGGCTaGCCACCGTGGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCPDLLG*PPWPQR
Trigger: CCGCTGTGGCCACGGTGGGCAGCCCAAAAGATCAGG...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCAGAGGGGAGCTGCCTaGACGGTCCTGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGQRGAA*TVLPRA
Trigger: TGCCCTTGGCAGGACCGTGCAGGCAGCTCCCCTCTG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCAGGCCAACTCGGCCTaGAGGAAGGGAGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSQANSA*RKGDLQ
Trigger: CTGCAGGTCTCCCTTCCTGCAGGCCGAGTTGGCCTG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCCTGCCTTCTCTGGATaGCCCCATGCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDPAFSG*PHARAG
Trigger: CCCAGCCCTGGCATGGGGGCATCCAGAGAAGGCAGG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCTTCCGGCTGCCTGTaGCTCTTCCCGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDASGCL*LFPGSW
Trigger: CCAGCTACCCGGGAAGAGGCACAGGCAGCCGGAAGC...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGGTCGAAAAGCCACGGAGCTaGAGGATCCATCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: VGSHGLRHPAAPQVALEVEKPRS*RIHPGI
Trigger: GATGCCCGGATGGATCCTGCAGCTCCGTGGCTTTTC...GACCTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR GCA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGGTGGACTTGAGGAGCTaGACTGTAACCAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GVGSHGLRHPAAPQVALEVDLRS*TVTKQG
Trigger: CCCCTGCTTGGTTACAGTGCAGCTCCTCAAGTCCAC...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp ACGTGCGTGATGGAGAAGCGGGACGTGGGCGCGGGCGACACCGTGAAGCGCGAGTCCTTCACCACCACCTaGGCACTGCTGATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TCVMEKRDVGAGDTVKRESFTTT*ALLMPE
Trigger: CTCTGGCATCAGCAGTGCCCAGGTGGTGGTGAAGGA...CTCGCGCTTCACGGTGTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTGTCACCTCGGCGCACTaGGCCAGGCACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATVTSAH*ARHWSR
Trigger: CCTGCTCCAGTGCCTGGCCCAGTGCGCCGAGGTGAC...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGGGTCGGGAGCCATaGACTCCGCCACCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHGGREP*TPPPGS
Trigger: GCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCC...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACTTCCCGCTCTTGGTCTaGTCCACGACGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHFPLLV*STTSRL
Trigger: CAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAA...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTCGTCGCCGTCCGCGTaGAAGCCGTCGCCCGCGAAC +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVSSPSA*KPSPAN
Trigger: GTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGA...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCGGTGGCAGGTGGACTaGGGGCGCAGCCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRARWQVD*GRSRRS
Trigger: ACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAAGGGGACGTGCCCAGTaGGTCCTCGAAGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTRGRAQ*VLEEGR
Trigger: CCTGCCTTCTTCGAGGACCCACTGGGCACGTCCCCT...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCGGGGTCCCAGGACTCTaGACAGCGGCTGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAGVPGL*TAAAAV
Trigger: AACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCC...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCTCGGGGGAGGCCCGTaGGGTCTGCTTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATLGGGP*GLLWTG
Trigger: CCCAGTCCAAAGCAGACCCCACGGGCCTCCCCCGAG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCTCGGGGGAGGCCCGTaGGGTCTGCTTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVALGGGP*GLLWTG
Trigger: CCCAGTCCAAAGCAGACCCCACGGGCCTCCCCCGAG...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGGCTCTGCCTGCGGGTaGTCACCCCCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHGSACG*SPPLLA
Trigger: AGCCAGTAGTGGGGGTGACCACCCGCAGGCAGAGCC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCTCCTCCGAGGGAAGTaGGGCTCCCTCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHLLRGK*GSLLGW
Trigger: CCATCCCAGGAGGGAGCCCCACTTCCCTCGGAGGAG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGGGCGTCGGGGGCACTaGCCTCCTCCGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEGRRGH*PPPREV
Trigger: CACTTCCCTCGGAGGAGGCCAGTGCCCCCGACGCCC...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCCTCATCCTCACTGCTaGGTGCCTCCACCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSPHPHC*VPPPRE
Trigger: CTCCCGAGGTGGAGGCACCCAGCAGTGAGGATGAGG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCAGAGAGCGGAAGGCTaGCACCACATCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTQRAEG*HHIRPP
Trigger: AGGAGGCCGGATGTGGTGCCAGCCTTCCGCTCTCTG...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCTTCAAGCTGCAGCAGTaGGGGCAGCACCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAFKLQQ*GQHLPG
Trigger: CCCGGGGAGGTGCTGCCCCCACTGCTGCAGCTTGAA...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCGCAGGTGCTGGGCTCTaGGGAGGACCCTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSAGAGL*GGPFKL
Trigger: CAGCTTGAAGGGTCCTCCCCAGAGCCCAGCACCTGC...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGGGGCTCCGGAGGCTCTaGGACCAGGCCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVGLRRL*DQARGA
Trigger: TGCCCCTCGGGCCTGGTCCCAGAGCCTCCGGAGCCC...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAAGGTTGCGCGCGCTCTaGCTCTCAGCCACCACCACG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTRLRAL*LSATTT
Trigger: CGTGGTGGTGGCTGAGAGCCAGAGCGCGCGCAACCT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACACCCCGAGCTCCCGGGTaGGGCTTTCCTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTPRAPG*GFPGQR
Trigger: TCTTTGACCAGGAAAGCCCCACCCGGGAGCTCGGGG...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCCCCGAGCTCCCGGGTaGGGCTTTCCTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTPRAPG*GFPGQR
Trigger: TCTTTGACCAGGAAAGCCCCACCCGGGAGCTCGGGG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCACCCCGCTGTGGAGCCATTTaGGGAGCCATCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AALAVISGKSSSHANPPPRCGAI*GAISLL
Trigger: CAGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCG...GGGTGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCCACCCCTGATCTTTTaGGCTGCCCACCGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTPPLIF*AAHRGH
Trigger: GTGGCCACGGTGGGCAGCCCAAAAGATCAGGGGTGG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CAGAAGGTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCGCCCCCACTCTCCTTTaGCAGCTGGGGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: QKVSDSRLGILSRLRRLRAPTLL*QLGHRT
Trigger: GGTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGC...GCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCCCCCACTCTCCTTTaGCAGCTGGGGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDAPTLL*QLGHRT
Trigger: GGTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGC...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTGCTGGGAGGGGAGCCTaGCTGCCCTGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVAAGRGA*LPCCFS
Trigger: GGAGAAGCAGCAGGGCAGCCAGGCTCCCCTCCCAGC...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAGCAGTGCTGCCCATCTaGTGGCTTCCCCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPAVLPI*WLPPPF
Trigger: GAAGGGCGGGGGAAGCCACCAGATGGGCAGCACTGC...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCCCAGCCCACACTGCTaGGAGGGTGATGGATCGGGG +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGPSPHC*EGDGSG
Trigger: CCCCGATCCATCACCCTCCCAGCAGTGTGGGCTGGG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGATGTCCGCCCCTCACTaGGAGGTTGTGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTMSAPH*EVVAGL
Trigger: CAGGCCAGCCACAACCTCCCAGTGAGGGGCGGACAT...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAGCTCTGCAGGGCCCATaGGTGTCCATCTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTALQGP*VSICSP
Trigger: AGGGCTGCAGATGGACACCCATGGGCCCTGCAGAGC...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCTCTTCCTGGGCAGCTaGACGGAACCCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDLFLGS*TEPCLP
Trigger: GGGCAGGCAGGGTTCCGTCCAGCTGCCCAGGAAGAG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTGCCAGCCTTGGGCTCTaGCCTGCGCTCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTASLGL*PALSPS
Trigger: GGATGGGGAGAGCGCAGGCCAGAGCCCAAGGCTGGC...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTTCCCCGCCGGCCTCCTaGGCGCGTCTTTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVASPPAS*ARLSQT
Trigger: TGTCTGGGAAAGACGCGCCCAGGAGGCCGGCGGGGA...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCTCTGGGTTGGCCCTaGCCACCACCTTGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLALGWP*PPPCLP
Trigger: CGGAAGGCAAGGTGGTGGCCAGGGCCAACCCAGAGC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGAGGTCAGGGTCCTaGGGAGAACCCTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTWRSGS*GEPWGA
Trigger: AGCTCCCCAGGGTTCTCCCCAGGACCCTGACCTCCA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGATCCGGGCATCTTTCTaGGTAGGTCTGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPIRASF*VGLEKV
Trigger: CACCTTCTCCAGACCTACCCAGAAAGATGCCCGGAT...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CCA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGCCGCTTGGCCTTTTCTaGGAAACTGTCCTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GVGSHGLRHPAAPQVALEPLGLF*ETVLSP
Trigger: GGGACTCAGGACAGTTTCCCAGAAAAGGCCAAGCGG...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576053.1
3UTR CAA 72 bp CAGCGCCAGCTTGGGCTCCTTCGGGTGTGTGTGCCTTaGGGGCTGACAGCCTTGTGGGGACTGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QRQLGLLRVCVP*GLTALWGLEVR
Trigger: CCTGACCTCCAGTCCCCACAAGGCTGTCAGCCCCAAAGGCACACACACCCGAAGGAGCCCAAGCTGGCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCCATTCTCAAACTCCTTaGACCCGATACCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGHSQTP*TRYRPS
Trigger: AGAAGGGCGGTATCGGGTTCAAGGAGTTTGAGAATG...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR TCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCCACGTCTGTGGACTTaGGGAGCTGCACTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDPRLWT*GAALSA
Trigger: GGCGCTCAGTGCAGCTCCTCAAGTCCACAGACGTGG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGGGGCTTGGGCAGCTTaGGCTGCTGCTCCCGGACCG +
Preference number: 4 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSGAWAA*AAAPGP
Trigger: CGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCACTTGTACTCAAAATTaGGGCCTCGGCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLTCTQN*GLGWSR
Trigger: CCGAGACCAGCCGAGGCCTCAATTTTGAGTACAAGT...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGGCAGAAGCCAGCTTaGTGGCAGACACCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLGQKPA*WQTPRH
Trigger: GTGGCGAGGTGTCTGCCATCAAGCTGGCTTCTGCCC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CAGAAGGTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCCGGAAACCCCAGGCCTaGGACAGACCTGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: QKVSDSRLGILSRLRRLRRKPQA*DRPAQT
Trigger: CGTCTGAGCAGGTCTGTCTCAGGCCTGGGGTTTCCG...GCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR TCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCGGAAACCCCAGGCCTaGGACAGACCTGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGRKPQA*DRPAQT
Trigger: CGTCTGAGCAGGTCTGTCTCAGGCCTGGGGTTTCCG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGTTGTGGGGCCGGCCCTaGCAACAGTCCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWLWGRP*QQSWGP
Trigger: GGGCCCCCAGGACTGTTGTCAGGGCCGGCCCCACAA...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCGCAGGCTGGGCATCTTaGGCAGGCTGCGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLAGWAS*AGCAGC
Trigger: GCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGC...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACATGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTWGRGT*ICCQQP
Trigger: TGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCA...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCGGCACTGGCCCCTTTTaGGTGTGTATGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLGTGPF*VCMCVQ
Trigger: CTGTACACACATACACACTCAAAAGGGGCCAGTGCC...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGAGGCCAGGAGGGCAGTTaGGAGCTGGCCAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGGQEGS*ELASGG
Trigger: CCCTCCGCTGGCCAGCTCTCAACTGCCCTCCTGGCC...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGAAGGGGGCCTTGGAATaGGAGTGGAGGGGCGAGCGT +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVKGALE*EWRGER
Trigger: ACGCTCGCCCCTCCACTCTCATTCCAAGGCCCCCTT...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTGTGCCTTTGGGGCTaGCAGCCTTGTGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVVCLWG*QPCGDW
Trigger: CCAGTCCCCACAAGGCTGTCAGCCCCAAAGGCACAC...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACTCCAGGCCCGCAAGTaGGGCAGGCTCCGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPLQARK*GRLRRR
Trigger: GCGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAG...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGGGGCCCGTTCTGTGCTaGCGTGGCCGGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALGPVLC*RGRGAL
Trigger: CAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCC...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGAGGTACAGGAGGCTGTaGCGGCCCACGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLRYRRL*RPTSVD
Trigger: GTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCACGCTGGCACTAGCCTaGAGCTCCTTCACCACCACC +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCTLALA*SSFTTT
Trigger: GGTGGTGGTGAAGGAGCTGCAGGCTAGTGCCAGCGT...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAGGCACTGGAGCAGGTTaGTGTGCTTCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTGTGAG*CASGPC
Trigger: ACAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCC...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGGGATAGGGCTGCGTaGCCAGCTCAAAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDGDRAA*PAQRAP
Trigger: GGGAGCTCTTTGAGCTGGGCACGCAGCCCTATCCCC...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTCTTCGCTGTCCTCGCTAGGCTCCTGGACGCTGTAGCAGCGGAGCTCCTCGTCGTGTACGCCAGCACCTaGTGGTCCGAGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFAVLARLLDAVAAELLVVYAST*WSECWG
Trigger: TCCCCAGCACTCGGACCAGCAGGTGCTGGCGTACAC...GACGAGGAGCTCCGCTGCTACAGCGTCCAGGAGCCTAGCGAGGACAGCGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGTTGGGCAGCTTGAGCTaGTGCTCCCGGACCGTGTAC +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTLGSLS*CSRTVY
Trigger: GTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAA...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCCTCGGGAGAGCTGCTaGTGCCATTCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: WRRLPWPSSAGSRRPTRTPRESC*CHSGQK
Trigger: CTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGG...GGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCATCCTCACTGCTGGGTaGCTCCACCTCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WRRLPWPSSAGSRRPTRTILTAG*LHLGRA
Trigger: AGCTCTCCCGAGGTGGAGGCACCCAGCAGTGAGGAT...GGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAATCCTCACTGCTGGGTaGCTCCACCTCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTILTAG*LHLGRA
Trigger: AGCTCTCCCGAGGTGGAGGCACCCAGCAGTGAGGAT...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCTGTCCTCATCCTCACTaGTGGGTGCCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSCPHPH*WVPPPR
Trigger: CCGAGGTGGAGGCACCCAGCAGTGAGGATGAGGACA...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCCACCTGCTTCTaGAGAGAGCGGAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVVPTCF*RERKAG
Trigger: GCCAGCCTTCCGCTCTCTGCAGAAGCAGGTGGGGAC...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGTCCCCACCTGCTTCTaGAGAGAGCGGAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHVPTCF*RERKAG
Trigger: GCCAGCCTTCCGCTCTCTGCAGAAGCAGGTGGGGAC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGACCTGCTCAGACGGCTaGCCAGTGCTCGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMTCSDG*PVLGRP
Trigger: GGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGGT...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAGGGGAGCCATCAGCCTaGTGCGGCCGGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPGEPSA*CGRLGA
Trigger: CGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCC...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCAGCCCAGACGAATTCTaGCTCTGGGGCGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCSPDEF*LWGGAW
Trigger: CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCT...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCAGAGGCTCACAAACCTaGCAGTGTCTCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPRGSQT*QCLGAM
Trigger: CATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACCAAAAATATTCCCTGTaGTGCCCTGCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHQKYSL*CPAPSS
Trigger: GGAGCTGGGGGCAGGGCAGCACAGGGAATATTTTTG...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCACTGCCCAGCCCACACTaGTGGGAGGGTGATGGATCG +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPLPSPH*WEGDGS
Trigger: CGATCCATCACCCTCCCAGCAGTGTGGGCTGGGCAG...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCCCATGGGTGTCCATCTaGAGCCCTGCGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLPWVSI*SPAGAV
Trigger: CACGGCTCCCGCAGGGCTGCAGATGGACACCCATGG...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACCTTGAGTCGTATTTGTaGATCAGCTGTGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHLESYL*ISCGPG
Trigger: CCCGGGGCCACAGCTGATGCACAAATACGACTCAAG...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGGGTTTGCTTCCGGCTaGCTGTGCCTCTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWGFASG*LCLFPG
Trigger: ACCCGGGAAGAGGCACAGGCAGCCGGAAGCAAACCC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCAGAGCCCCAGCTGTGTaGCGACTCCGAGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGRAPAV*RLRVLQ
Trigger: CTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCT...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCGGAGACCTCCGTGAGTaGCAGGACGTACACGTCGGG +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAGDLRE*QDVHVG
Trigger: CCCGACGTGTACGTCCTGCCACTCACGGAGGTCTCC...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCTTTGCCGTGGGGGCCCTCCTTCACCACCACCTaGGCACTGCTGATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VGYGPPSGSRRASLPWGPSFTTT*ALLMPE
Trigger: CTCTGGCATCAGCAGTGCCCAGGTGGTGGTGAAGGA...GGGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAAGGAGGTCCATACCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCCTCCTCTGCTTCGGTaGCGCCCTTGGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHPPLLR*RPWHTG
Trigger: ACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCTCAGAGTCGTCGTCCTaGTCCGCGGTGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGSESSS*SAVAGG
Trigger: TCCACCTGCCACCGCGGACCAGGACGACGACTCTGA...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATTCGACGGGTGGCCCGTaGCCCAGCAGCGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHSTGGP*PSSGSM
Trigger: CATGGAGCCGCTGCTGGGCCACGGGCCACCCGTCGA...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAAGGGGACGTGCCCAGTaGGTCCTCGAAGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTRGRAQ*VLEEGR
Trigger: CCTGCCTTCTTCGAGGACCCACTGGGCACGTCCCCT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGTGTTGGCTGACACGTTaGAGCGCCAGTGCCCGCGCT +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLCWLTR*SASARA
Trigger: AGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACA...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGCCGGGGCAGCAGCCTaGCTCCTGGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPAGAAA*LLGRGC
Trigger: GCAGCCTCTGCCCAGGAGCCAGGCTGCTGCCCCGGC...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAGCCGGGGCAGCAGCCTaGCTCCTGGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPAGAAA*LLGRGC
Trigger: GCAGCCTCTGCCCAGGAGCCAGGCTGCTGCCCCGGC...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCCTCATCCTCACTGCTaGGTGCCTCCACCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLPHPHC*VPPPRE
Trigger: CTCCCGAGGTGGAGGCACCCAGCAGTGAGGATGAGG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCCACATCCGGCCTCCTaGCCTGCAGGCCGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHPHPAS*PAGRRW
Trigger: CCAGCGACGGCCTGCAGGCCAGGAGGCCGGATGTGG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACACAGAGAGCGGAAGGCTaGCACCACATCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTQRAEG*HHIRPP
Trigger: AGGAGGCCGGATGTGGTGCCAGCCTTCCGCTCTCTG...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCAGAGAGCGGAAGGCTaGCACCACATCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLQRAEG*HHIRPP
Trigger: AGGAGGCCGGATGTGGTGCCAGCCTTCCGCTCTCTG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGAGCTCCGCAAAGGCCTaGGGCTCACACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWSSAKA*GSHPSC
Trigger: GCAGGAAGGGTGTGAGCCCCAGGCCTTTGCGGAGCT...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATAGGCCGCACCTTGGCTaGGCCTTGGGGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHRPHLG*ALGLRR
Trigger: CCTCCGGAGCCCCAAGGCCCAGCCAAGGTGCGGCCT...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTAGGTTGCGCGCGCTCTaGCTCTCAGCCACCACCACG +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVARLRAL*LSATTT
Trigger: CGTGGTGGTGGCTGAGAGCCAGAGCGCGCGCAACCT...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCGCTGTGGAGCCATTTaGGGAGCCATCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSRCGAI*GAISLL
Trigger: CAGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCCTCTGGGGCGGAGCATaGCCGATCTACCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTALWGGA*PIYHPG
Trigger: CCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAG...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATC +
Preference number: 4 (lower is better)
Translates to: LGPWRRLPWPSSAGSRRPDEFCL*GGAWPI
Trigger: GATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC...GGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCCACCCCTGATCTTTTaGGCTGCCCACCGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLPPLIF*AAHRGH
Trigger: GTGGCCACGGTGGGCAGCCCAAAAGATCAGGGGTGG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTCTTCGCTGTCCTCGCTAGGCTCCTGGACGCTGTAGCAGCGGAGCTCCTCGTCCCACCCCTGATCTTTTaGGCTGCCCACCGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LFAVLARLLDAVAAELLVPPLIF*AAHRGH
Trigger: GTGGCCACGGTGGGCAGCCCAAAAGATCAGGGGTGG...GACGAGGAGCTCCGCTGCTACAGCGTCCAGGAGCCTAGCGAGGACAGCGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATGCCAGGGCTGGGCTaGACGCTCTGCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLMPGLG*TLCHAV
Trigger: CACAGCGTGGCAGAGCGTCCAGCCCAGCCCTGGCAT...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGTGACTTTCCTTTGCTaGCTGGAGAGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHVTFLC*LERCWW
Trigger: CCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCAC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGCTGAACTTTGGGGACTaGATGGAGATGCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQLNFGD*MEMLWV
Trigger: AACCCAGAGCATCTCCATCCAGTCCCCAAAGTTCAG...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGTGGATCTGCAGACCTaGAGGGCTGCTGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHVDLQT*RAAGSR
Trigger: CCTGGACCCAGCAGCCCTCCAGGTCTGCAGATCCAC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAAGGTGTTGGGCCCACTaGGGACCGGGCTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTRCWAH*GPGCAV
Trigger: AACAGCACAGCCCGGTCCCCAGTGGGCCCAACACCT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCGCGCCGATGTGGAAGTaGCCAGATTCTGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCAPMWK*PDSEPP
Trigger: AGGCGGCTCAGAATCTGGCCACTTCCACATCGGCGC...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCGTGCGTCTTTGCCGTaGGGGCCCCGCCTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVRASLP*GPRLVP
Trigger: GGGCACAAGGCGGGGCCCCCACGGCAAAGACGCACG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp GTCCAGGAGCAGGCCCTCTGCCCTCATAGGGGGCCCTaGCCCACACCTTCCAATCGCCTACACCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VQEQALCPHRGP*PTPSNRLHLCL
Trigger: CAGACACAGGTGTAGGCGATTGGAAGGTGTGGGCAAGGGCCCCCTATGAGGGCAGAGGGCCTGCTCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCAAGGAGACCTCCGTaGGTGGCAGGACGTACACGT +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHARRPP*VAGRTR
Trigger: ACGTGTACGTCCTGCCACTCACGGAGGTCTCCTTGC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCAAGGAGACCTCCGTaGGTGGCAGGACGTACACGT +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLARRPP*VAGRTR
Trigger: ACGTGTACGTCCTGCCACTCACGGAGGTCTCCTTGC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCCGTCAGGTCAGCCGTaGGCAGGCAGTTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVPSGQP*AGSSAG
Trigger: CCCTGCGGAACTGCCTGCTCACGGCTGACCTGACGG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGGGGCTTGGGCAGCTTaGGCTGCTGCTCCCGGACCG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPGAWAA*AAAPGP
Trigger: CGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCC...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGTGGGCAGAGCATAGATaGGGGAGGCCGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMWAEHR*GRPGQQ
Trigger: CTGCTGCCCCGGCCTCCCTCATCTATGCTCTGCCCA...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCGCTGGACGTGTCGGTaGAGATGCCTGAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATRWTCR*RCLRWP
Trigger: AGGCCACCTCAGGCATCTTCACCGACACGTCCAGCG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAAGTCAGACACGTGCGTaGTGGAGAAGCGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTSQTRA*WRSGTW
Trigger: CCACGTCCCGCTTCTCCATCACGCACGTGTCTGACT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACTGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDWGRGT*ICCQQP
Trigger: TGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCA...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTGGCACTGGCCCCTTTTaGGTGTGTATGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSGTGPF*VCMCVQ
Trigger: CTGTACACACATACACACTCAAAAGGGGCCAGTGCC...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp TGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WRRLPWPSSAGSRRPTRTGLSVL*AHRRSC
Trigger: GCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACC...GGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR TCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGGCCACTCCTTGCCCTaGGCCACCAGGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVGHSLP*ATRNQA
Trigger: TGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGGCCACTCCTTGCCCTaGGCCACCAGGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEGHSLP*ATRNQA
Trigger: TGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCC...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GGGCTCCCCCTAAGGAACGTAGGGGGCGATTCCTTGGCGCCCGGGAAGGGCTCCAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GLPLRNVGGDSLAPGKGSNSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...GGAGCCCTTCCCGGGCGCCAAGGAATCGCCCCCTACGTTCCTTAGGGGGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSAYGSS*VSEGET
Trigger: TGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGC...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTGAGCTCTGTGCCCTaGGATCGGACCGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVVSSVP*DRTVGI
Trigger: GATGCCTACGGTCCGATCTCAGGGCACAGAGCTCAC...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCCAGCCTCAGTGGTaGTGTCCGCCCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAPQPQW*CPPLTG
Trigger: CCCAGTGAGGGGCGGACATCACCACTGAGGCTGGGG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCCTTGGAGCTGCCTaGCATCCCCCATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTATLGAA*HPPSCP
Trigger: AGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGT...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTGGATCCAGCAGACCCTaGGGCTCCAGCACGTTGAGA +
Preference number: 4 (lower is better)
Translates to: GEPEPQLCADSECSRVLGGSSRP*GSSTLR
Trigger: TCTCAACGTGCTGGAGCCTCAGGGTCTGCTGGATCC...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCATTTCCTCACGGGTTaGGTGGGCCACTCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHHFLTG*VGHSPG
Trigger: ACCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCAGGTACAGGAGGCTGTaGCGGCCCACGTCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLRYRRL*RPTSVD
Trigger: GTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCACCTCCTCCAGGAACTaGATCTGCTCCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCTSSRN*ICSCTL
Trigger: CAGCGTGCAGGAGCAGATGCAGTTCCTGGAGGAGGT...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCCACCTCACAGGCCATaGGCTGCAGGGTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHPPHRP*AAGSGG
Trigger: ACCCCCGGACCCTGCAGCGCATGGCCTGTGAGGTGG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTGGGGATAGGGCTGCGTaGCCAGCTCAAAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATGDRAA*PAQRAP
Trigger: GGGAGCTCTTTGAGCTGGGCACGCAGCCCTATCCCC...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTTCGGCTGTGGGCCGCTaGTCGGGCTGCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPSAVGR*SGCSQQ
Trigger: CTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGA...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTTCAAACTCCTCCTCTaGTTCGGTGGCGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTFKLLL*FGGALG
Trigger: GCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGTCGCCCGCGAACTaGTCCAGCAGCGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTPSPAN*SSSGKD
Trigger: GTCCTTCCCGCTGCTGGAGCAGTTCGCGGGCGACGG...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CAGAAGGTCTCGGACAGCAGGCTGGGCATCTTGAGCAGGCTGCGCAGGTTGCGCTCCCCAAAGGGGACGTaGCCAGTGGGTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: QKVSDSRLGILSRLRRLRSPKGT*PVGPRR
Trigger: TCTTCGAGGACCCACTGGGCACGTCCCCTTTGGGGA...GCGCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCTGTCCGAGACCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTCCCCAAAGGGGACGTaGCCAGTGGGTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWSPKGT*PVGPRR
Trigger: TCTTCGAGGACCCACTGGGCACGTCCCCTTTGGGGA...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCTCCTGGGCAGAGGCTaGCTGGAGCCCAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVLLGRG*LEPKQR
Trigger: CCTCTGCTTGGGCTCCAGGCAGCCTCTGCCCAGGAG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCGGGAGAGCTGCTGCTaGCATTCAGGGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGRESCC*HSGQKP
Trigger: TGGCTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCCTCGGGAGAGCTGCTaGTGCCATTCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWPRESC*CHSGQK
Trigger: CTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCAGCGGAGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCCCTCGGGAGAGCTGCTaGTGCCATTCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AAELLVRLVAVLTVLLLLPRESC*CHSGQK
Trigger: CTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGG...GAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCTCCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGATCCTCACTGCTGGGTaGCTCCACCTCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLILTAG*LHLGRA
Trigger: AGCTCTCCCGAGGTGGAGGCACCCAGCAGTGAGGAT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCATCCTCACTGCTGGGTaGCTCCACCTCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGILTAG*LHLGRA
Trigger: AGCTCTCCCGAGGTGGAGGCACCCAGCAGTGAGGAT...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGTGTCCTCATCCTCACTaGTGGGTGCCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLCPHPH*WVPPPR
Trigger: CCGAGGTGGAGGCACCCAGCAGTGAGGATGAGGACA...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCATCCGGCCTCCTGGCCTaGAGGCCGTCGCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPSGLLA*RPSLDV
Trigger: CACGTCCAGCGACGGCCTGCAGGCCAGGAGGCCGGA...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCAGACGGCTGCCCAGTaGTCGGCAGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAQTAAQ*SAGPAL
Trigger: CAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCAGCCCAGACGAATTCTaGCTCTGGGGCGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTASPDEF*LWGGAW
Trigger: CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCT...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGAGCCCAGACGAATTCTaGCTCTGGGGCGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLSPDEF*LWGGAW
Trigger: CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGAGAGGCTCACAAACCTaGCAGTGTCTCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTRGSQT*QCLGAM
Trigger: CATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTGATCTTTTGGGCTaGCCACCGTGGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATPDLLG*PPWPQR
Trigger: CCGCTGTGGCCACGGTGGGCAGCCCAAAAGATCAGG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCACCCCAAAAATATTCCCTGTaGTGCCCTGCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AALAVISGKSSSHANPPPQKYSL*CPAPSS
Trigger: GGAGCTGGGGGCAGGGCAGCACAGGGAATATTTTTG...GGGTGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTTACAGTGTGGTGAGCTaGACTGGTGACAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSYSVVS*TGDNSP
Trigger: AGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTGCGCCTGGTCCTCCCTaGCCCGCAAAGCAGCGTATA +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVAAPGPP*PAKQRI
Trigger: TATACGCTGCTTTGCGGGGCAGGGAGGACCAGGCGC...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCTGGGCTGGACGCTCTaGCACGCTGTGTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVLGWTL*HAVSLG
Trigger: ACCCAGGGACACAGCGTGGCAGAGCGTCCAGCCCAG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTGATGGCCAGCTGCTCTaGAGGGCCCATGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATDGQLL*RAHGCP
Trigger: TGGACACCCATGGGCCCTGCAGAGCAGCTGGCCATC...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTTGTGGACGGAGTCTGCCTaGCCGTCCCCAGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: AFLCREHPGPGCLVLPHLWTESA*PSPGLF
Trigger: GAACAACCCTGGGGACGGGCAGGCAGACTCCGTCCA...CAAGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTAGCACCACTCCACAGTaGCAGGGGCCAGTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVASTTPQ*QGPVSR
Trigger: CCGGGAAACTGGCCCCTGGCACTGTGGAGTGGTGCT...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGCTCTGCAAAGCCAGTaGCTGCATCCTTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHALQSQ*LHPSQR
Trigger: CCTTTGTGAAGGATGCAGGCACTGGCTTTGCAGAGC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGTGTCTGGGCGGGTCCTaGTTCCCACCACCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVCLGGS*FPPPFH
Trigger: ATGGAAGGGTGGTGGGAAGCAGGACCCGCCCAGACA...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCTGTGTGGTCCTCTCCTaGCCTGCTGGGCGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSCVVLS*PAGRFN
Trigger: ATTGAAGCGCCCAGCAGGGCAGGAGAGGACCACACA...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCCTCTCACTCTGGGTaGTGGGCCTTCTCTACTGGG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLASHSG*WAFSTG
Trigger: CCCAGTAGAGAAGGCCCAGCACCCAGAGTGAGAGGC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGGGGGCCCCGCCTTGTaGCCACCTCTGCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVGGPAL*PPLPGI
Trigger: AATACCTGGCAGAGGTGGGCACAAGGCGGGGCCCCC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACATTCCGGTTCCCGGCGTaGGTCTTTGCCGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTFRFPA*VFAVGA
Trigger: GGCCCCCACGGCAAAGACGCACGCCGGGAACCGGAA...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCCACTGGGCCAGGCACTaGAGCAGGTTGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAHWARH*SRLLCF
Trigger: GAAGCACAGCAACCTGCTCCAGTGCCTGGCCCAGTG...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCACTGGGCCAGGCACTaGAGCAGGTTGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDHWARH*SRLLCF
Trigger: GAAGCACAGCAACCTGCTCCAGTGCCTGGCCCAGTG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCTCGTCCACCAGCTCTaGCGCGATCCAGCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEELVHQL*RDPAQR
Trigger: CCTCTGCGCTGGATCGCGCCAGAGCTGGTGGACGAG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGCTGCCCAGGTCTCAAGCCTCTTTACTCTCACCCCCGGCACCAGCTTCAGGTCTCGTCCACCAGCTCTaGCGCGATCCAGCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ELPRSQASLLSPPAPASGLVHQL*RDPAQR
Trigger: CCTCTGCGCTGGATCGCGCCAGAGCTGGTGGACGAG...ACCTGAAGCTGGTGCCGGGGGTGAGAGTAAAGAGGCTTGAGACCTGGGCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCACGCGAACCCACCACCCACACATTCCCGCTCTTaGTCTGGTCCACGACGAGCA +
Preference number: 4 (lower is better)
Translates to: AALAVISGKSSSHANPPPTHSRS*SGPRRA
Trigger: TGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGT...GGGTGGTGGGTTCGCGTGGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTTCGGTGGCGCCCTTaGCACACAGGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGLRWRP*HTGRTA
Trigger: TGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCTTCGGTGGCGCCCTTaGCACACAGGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWLRWRP*HTGRTA
Trigger: TGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGGTCACCCCCACTACTaGCTGTCTCTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWGHPHY*LSLSRR
Trigger: CCTCCTGGACAGAGACAGCCAGTAGTGGGGGTGACC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTGGTCACCCCCACTACTaGCTGTCTCTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GEPEPQLCADSECSRVLGGHPHY*LSLSRR
Trigger: CCTCCTGGACAGAGACAGCCAGTAGTGGGGGTGACC...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCCCTCATCCTCACTGCTaGGTGCCTCCACCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLPHPHC*VPPPRE
Trigger: CTCCCGAGGTGGAGGCACCCAGCAGTGAGGATGAGG...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGCCACATCCGGCCTCCTaGCCTGCAGGCCGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALPHPAS*PAGRRW
Trigger: CCAGCGACGGCCTGCAGGCCAGGAGGCCGGATGTGG...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACTGGCGAAGGCTGCCTTaGCCGTCATCAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHWRRLP*PSSAGS
Trigger: ACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCCTCCGGCTGGCGAAGGCTGCCTTaGCCGTCATCAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSSSDSSLSSLSSSSSSGWRRLP*PSSAGS
Trigger: ACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCA...GCCGGAGGAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCCGGGTCTAGGGCCATaGCGAAGGCTGCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVPGLGP*RRLPWP
Trigger: CGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATC +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPDEFCL*GGAWPI
Trigger: GATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAGGAGGAGCTGCCGGATaGGGCATGCGGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTGGAAG*GMRVLR
Trigger: TCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCC...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGAGGGCAGTTGAGAGCTaGCCAGCGGAGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEERAVES*PAEGAG
Trigger: CCCTGCACCCTCCGCTGGCCAGCTCTCAACTGCCCT...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAACAACAGCCCTTACCTaGCTGGGGAGGTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTTTALT*LGRCLQ
Trigger: CTGGAGACACCTCCCCAGCCAGGTAAGGGCTGTTGT...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGTGCTGCCCATCTGGTaGCTTCCCCCGCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVVLPIW*LPPPFP
Trigger: TGGGAAGGGCGGGGGAAGCCACCAGATGGGCAGCAC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGTAGGCATCCAGCACTaGGGAATCCCTGGGGCATCG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTVGIQH*GIPGAS
Trigger: CGATGCCCCAGGGATTCCCCAGTGCTGGATGCCTAC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCTCACTGGGAGGTTGTaGCTGGCCTGCCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWLTGRL*LACPAP
Trigger: TGGGGCGGGGCAGGCCAGCCACAACCTCCCAGTGAG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGGTCTGGCCCAGGGGATaGCCAGCTGCTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMVWPRG*PAALQG
Trigger: GCCCTGCAGAGCAGCTGGCCATCCCCTGGGCCAGAC...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCTGCCCGGGCTCTTGTaGACCCAGCTGTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVLPGLL*TQLCQR
Trigger: CCTCTGGCACAGCTGGGTCCACAAGAGCCCGGGCAG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCACTGCCCTCGGCTGTaGTCTGGGCCAGATCTAGGA +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLHCPRL*SGPDLG
Trigger: TCCTAGATCTGGCCCAGACCACAGCCGAGGGCAGTG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCCCAGCCCCTCCTTGTaGGCCTGCTGTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVPSPSL*ACCPSQ
Trigger: CTGGCTGGGACAGCAGGCCCACAAGGAGGGGCTGGG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGTCTTTCCCAGACAGCTaGGGGGTGGGGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEESFPDS*GVGARV
Trigger: CACCCTGGCCCCCACCCCCCAGCTGTCTGGGAAAGA...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAGGTGAAGCTGCCGCTTaGCCGAGCGCCGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPGEAAA*PSAVAH
Trigger: GTGGGCCACGGCGCTCGGCCAAGCGGCAGCTTCACC...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGGTGCCGGTGGGGCAGTaGTGCTCAGCCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVVPVGQ*CSAPAP
Trigger: TGGTGCTGGGGCTGAGCACCACTGCCCCACCGGCAC...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGAATGCTCCTGAACTTTaGGGACTGGATGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQANAPEL*GLDGDA
Trigger: AGCATCTCCATCCAGTCCCCAAAGTTCAGGAGCATT...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCAGTCCCTGTGTCTCCCTaGTGGTCACAGCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPVPVSP*WSQQAS
Trigger: GGATGCCTGCTGTGACCACCAGGGAGACACAGGGAC...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACCACTCCCCTGGTGCCTaGTGTATATTTGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHHSPGA*CIFGMC
Trigger: GCACATCCCAAATATACACCAGGCACCAGGGGAGTG...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAGCTGAGGCAGGCTCCTaGCTCCCTCCAGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTAEAGS*LPPGPQ
Trigger: TTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTCAGC...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGATTTATTGCACGAGTTaGGTATGGACCTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQIYCTS*VWTSFR
Trigger: CCGGAAGGAGGTCCATACCCAACTCGTGCAATAAAT...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAAGGCGAAGCTGGGGTTaGAGAAGGACGACGACATGG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTRRSWG*RRTTTW
Trigger: CCATGTCGTCGTCCTTCTTCAACCCCAGCTTCGCCT...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR TCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCCACGTCTGTGGACTTaGGGAGCTGCACTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVPRLWT*GAALSA
Trigger: GGCGCTCAGTGCAGCTCCTCAAGTCCACAGACGTGG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCTGTTGTTGTTGGCTaGCACGTTGGAGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTAVVVG*HVGAPV
Trigger: CACTGGCGCTCCAACGTGTCAGCCAACAACAACAGC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGGCCACCATCACTGGCTaGGGACGGGATGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLATITG*GRDVQG
Trigger: TCCCTGGACATCCCGTCCTCAGCCAGTGATGGTGGC...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCAGCCTCGAGGTCTaGGAAGTAGGCAGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGLSLEV*EVGRVS
Trigger: CGAGACTCTGCCTACTTCTCAGACCTCGAGGCTGAG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCTTCTTCTCTGGGCCTaGGGTGGCCTCGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHLLLWA*GGLGLS
Trigger: GCTGAGGCCGAGGCCACCTCAGGCCCAGAGAAGAAG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGCAGGCTGGGCATCTTaGGCAGGCTGCGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWAGWAS*AGCAGC
Trigger: GCAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGGLSVL*AHRRSC
Trigger: GCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACC...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWGLSVL*AHRRSC
Trigger: GCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACC...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGGCCACTCCTTGCCCTaGGCCACCAGGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAGHSLP*ATRNQA
Trigger: TGCCTGGTTCCTGGTGGCTCAGGGCAAGGAGTGGCC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCCGGGTCTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGSRAMAKAALAVISGKSNSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...CGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTGTCGAAATGCATTTGTaGCGGCTCCGTTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAVEMHL*RLRFFS
Trigger: CGAGAAGAAACGGAGCCGTCACAAATGCATTTCGAC...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACTGCTGGGTCCAGGTTTaGGCTGACGCTCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDCWVQV*ADAHSG
Trigger: CCCGGAGTGAGCGTCAGCTCAAACCTGGACCCAGCA...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGACCTCCTCCAGGAACTaGATCTGCTCCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLTSSRN*ICSCTL
Trigger: CAGCGTGCAGGAGCAGATGCAGTTCCTGGAGGAGGT...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCACCACCTCACAGGCCATaGGCTGCAGGGTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPPPHRP*AAGSGG
Trigger: ACCCCCGGACCCTGCAGCGCATGGCCTGTGAGGTGG...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGACGAGCAGGTTGCTATaGACCTCGTCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPLGRSMADLPSRASHPTTSRLL*TSSTSS
Trigger: AGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGT...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACACCACGACGAGCAGGTTaGTATGCACCTCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTPRRAG*YAPRPP
Trigger: TGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGG...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGGGGGATAGGGCTGCGTaGCCAGCTCAAAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEGDRAA*PAQRAP
Trigger: GGGAGCTCTTTGAGCTGGGCACGCAGCCCTATCCCC...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCAGCTTGAGCTGCTaGTCCCGGACCGTGTACGCC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHGSLSC*SRTVYA
Trigger: GGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCC...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACATCCGACAGGGTCAGCTaGAGCTGGGGCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTSDRVS*SWGLGS
Trigger: GCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGA...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGTGCAGCCAGCAGAACTaGATCACCTCGTACCAGCGG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLCSQQN*ITSYQR
Trigger: CCGCTGGTACGAGGTGATGCAGTTCTGCTGGCTGCA...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCATGCAGCCAGCAGAACTaGATCACCTCGTACCAGCGG +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPCSQQN*ITSYQR
Trigger: CCGCTGGTACGAGGTGATGCAGTTCTGCTGGCTGCA...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGGCCGCTGCTCGGGCTaGAGCCAGCAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAGRCSG*SQQNCI
Trigger: GATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTCCAGCGAGGCGGCGGTaGTGCCGTCAGAGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSPARRR*CRQSRR
Trigger: ACGACGACTCTGACGGCAGCACCGCCGCCTCGCTGG...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGGGCCACGCCCCAGTCTaGATCCTCCGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALGHAPV*ILRSSL
Trigger: GAGGGAGGAGCGGAGGATGCAGACTGGGGCGTGGCC...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACACTCTGGACAGCGGCTaGCGCTGTTGTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDTLDSG*RCCCWL
Trigger: CAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGT...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGTCGGGGGTCCCCACCTaGTTCTGCAGAGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLSGVPT*FCRERK
Trigger: CTTCCGCTCTCTGCAGAAGCAGGTGGGGACCCCCGA...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGTTGAGGGGCAGGAGCTaGCCAGGTCTCAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLLRGRS*PGLKPL
Trigger: AAGAGGCTTGAGACCTGGGCAGCTCCTGCCCCTCAA...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGAGGGGCAGGAGCTaGCCAGGTCTCAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWLRGRS*PGLKPL
Trigger: AAGAGGCTTGAGACCTGGGCAGCTCCTGCCCCTCAA...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGTTGAGGGGCAGGAGCTaGCCAGGTCTCAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVLRGRS*PGLKPL
Trigger: AAGAGGCTTGAGACCTGGGCAGCTCCTGCCCCTCAA...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GCAGCGGAGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCAGAGGCTCACAAACCTaGCAGTGTCTCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: AAELLVRLVAVLTVLLLLRGSQT*QCLGAM
Trigger: CATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT...GAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCTCCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWPRATP*PEPPGT
Trigger: GGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHPRATP*PEPPGT
Trigger: GGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGAAATATTCCCTGTGCTaGCCTGCCCCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWKYSLC*PAPSST
Trigger: GGTGGAGCTGGGGGCAGGGCAGCACAGGGAATATTT...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCAAAAATATTCCCTGTaGTGCCCTGCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EIRAAETGPTRAPRATPCQKYSL*CPAPSS
Trigger: GGAGCTGGGGGCAGGGCAGCACAGGGAATATTTTTG...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCTGATGGCCACATCTaGAGTGCTGCCCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLADGHI*SAAHLV
Trigger: CACCAGATGGGCAGCACTGCAGATGTGGCCATCAGC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTGCCGTGAGCCTAACCTaGCTTCTCTGGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTAVSLT*LLWMPP
Trigger: TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGC...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACGTCCATCTGCAGCCCTaGGGGAGCCGTGAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDVHLQP*GSREPN
Trigger: GTTAGGCTCACGGCTCCCGCAGGGCTGCAGATGGAC...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACAGGGGATGGCCAGCTaGTCTGCAGGGCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTQGMAS*SAGPMG
Trigger: ACCCATGGGCCCTGCAGAGCAGCTGGCCATCCCCTG...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGTCCAAGCACAGCTTTaGCAGAGCACAGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHVQAQL*QSTVPS
Trigger: GGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGAC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGAGCTGGACGGAACCCTaGCTGCCCACCCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLSWTEP*LPTPGF
Trigger: AAACCCTGGGGTGGGCAGGCAGGGTTCCGTCCAGCT...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCGTTCGTGGCAATCGCTaGCCAGGGCCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLVRGNR*PGPCPA
Trigger: TGCAGGACATGGCCCTGGGCAGCGATTGCCACGAAC...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGTCTCCCCTGCGGCCTTaGTTAGGGGCCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMSPLRP*LGASEG
Trigger: CCCCTCAGAGGCCCCTAAGCAAGGCCGCAGGGGAGA...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTCTACAATTGCACCACTaGATTCCAGCCCGGAAGACA +
Preference number: 4 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSLQLHH*IPARKT
Trigger: TGTCTTCCGGGCTGGAATGCAGTGGTGCAATTGTAG...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTAAGACAGAAAACAGGTaGTGTCCGCCCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GEPEPQLCADSECSRVLGKTENR*CPPGSG
Trigger: CCCAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTT...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGACTCCCCAATCCCATTaGCACCCTGTCATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWTPQSH*HPVMPQ
Trigger: CTGGGGCATGACAGGGTGGCAATGGGATTGGGGAGT...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCACGGCGAGGGAGGATaGCCAGGACAGCTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHHGEGG*PGQLAE
Trigger: CTCAGCGAGCTGTCCTGGCCATCCTCCCTCGCCGTG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR CCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTCACCTCGGCGCACTaGGCCAGGCACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPVTSAH*ARHWSR
Trigger: CCTGCTCCAGTGCCTGGCCCAGTGCGCCGAGGTGAC...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCTCGTCCACCAGCTCTaGCGCGATCCAGCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVLVHQL*RDPAQR
Trigger: CCTCTGCGCTGGATCGCGCCAGAGCTGGTGGACGAG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTCTTCGCTGTCCTCGCTAGGCTCCTGGACGCTGTAGCAGCGGAGCTCCTCGTCTTCCCGCTCTTGGTCTaGTCCACGACGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LFAVLARLLDAVAAELLVFPLLV*STTSRL
Trigger: CAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAA...GACGAGGAGCTCCGCTGCTACAGCGTCCAGGAGCCTAGCGAGGACAGCGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCAAAGAGCTCCCAGATaGTCACGCCCAGGGACCACA +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHQRAPR*SRPGTT
Trigger: TGTGGTCCCTGGGCGTGACCATCTGGGAGCTCTTTG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTCCAGGGTTCTAGGTCAAAGAGCTCCCAGATaGTCACGCCCAGGGACCACA +
Preference number: 4 (lower is better)
Translates to: GEPEPQLCADSECSRVLGQRAPR*SRPGTT
Trigger: TGTGGTCCCTGGGCGTGACCATCTGGGAGCTCTTTG...ACCTAGAACCCTGGAGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGGCACCTCCTCGGCTGTaGGCCGCTGCTCGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPAPPRL*AAARAA
Trigger: TGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGC...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACTGCCGCTGTTGTTGTTaGCTGACACGTTGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHCRCCC*LTRWSA
Trigger: GGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCA...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGTGCCGCTGTTGTTGTTaGCTGACACGTTGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLCRCCC*LTRWSA
Trigger: GGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCA...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGAGGGTCTGCTTTGGACTaGGGCAGCCCTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGGSALD*GSPQRG
Trigger: GCCACGCTGAGGGCTGCCCCAGTCCAAAGCAGACCC...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCTCCGTGGCAAGCTTaGGCTCTGCCTGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAPPWQA*ALPAGG
Trigger: ACCACCCGCAGGCAGAGCCCAAGCTTGCCACGGAGG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGACCTCCGTGGCAAGCTTaGGCTCTGCCTGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGPPWQA*ALPAGG
Trigger: ACCACCCGCAGGCAGAGCCCAAGCTTGCCACGGAGG...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCAGAGAGCGGAAGGCTaGCACCACATCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEQRAEG*HHIRPP
Trigger: AGGAGGCCGGATGTGGTGCCAGCCTTCCGCTCTCTG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGAGCTCCGCAAAGGCCTaGGGCTCACACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMSSAKA*GSHPSC
Trigger: GCAGGAAGGGTGTGAGCCCCAGGCCTTTGCGGAGCT...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGTTCAAGCTGCAGCAGTaGGGGCAGCACCTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAFKLQQ*GQHLPG
Trigger: CCCGGGGAGGTGCTGCCCCCACTGCTGCAGCTTGAA...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATAGGTTGCGCGCGCTCTaGCTCTCAGCCACCACCACG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHRLRAL*LSATTT
Trigger: CGTGGTGGTGGCTGAGAGCCAGAGCGCGCGCAACCT...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCACCCTCTTCCGCTGTaGAGCCATTTGGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWHPLPL*SHLGSH
Trigger: ATGGCTCCCCAAATGGCTCCACAGCGGAAGAGGGTG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCTTCAGGTCCTCTCTTaGACTCGGCGTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLLQVLS*TRRPSQ
Trigger: CTGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGCAGCCTGTTCCCTGTaGGAAGGGTGGGCTTACGGG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVAACSL*EGWAYG
Trigger: CCCGTAAGCCCACCCTTCCCACAGGGAACAGGCTGC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TCCTCTCTTGGACTCGGCGTCCGAGTCAGACACGTGCGTGATGGAGAAGCGGGACCACCCCTGATCTTTTaGGCTGCCCACCGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSLGLGVRVRHVRDGEAGPPLIF*AAHRGH
Trigger: GTGGCCACGGTGGGCAGCCCAAAAGATCAGGGGTGG...TCCCGCTTCTCCATCACGCACGTGTCTGACTCGGACGCCGAGTCCAAGAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCTCTCCTTTGGCAGCTaGGGCACAGGACCAGATACT +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTLSFGS*GTGPDT
Trigger: AGTATCTGGTCCTGTGCCCCAGCTGCCAAAGGAGAG...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACATCCGGCAGCTACACCTaGAGTGTGGGGCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTSGSYT*SVGPGP
Trigger: GGGACCAGGCCCCACACTCCAGGTGTAGCTGCCGGA...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGGCCTCTCAGAGTGCTaGGATTCTAGGCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHGLSEC*DSRQEP
Trigger: TGGCTCCTGCCTAGAATCCCAGCACTCTGAGAGGCC...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGACAGGCCTGCACCAGTaGAGGGCTTCCTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPETGLHQ*RASYPC
Trigger: GCAGGGGTAGGAAGCCCTCCACTGGTGCAGGCCTGT...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGATGTCCTGCAGGAGGTaGGGCCTGGCACGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEMSCRR*GLARVL
Trigger: GAGGACACGTGCCAGGCCCCACCTCCTGCAGGACAT...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCAGGGTCCTCCGCTCTTaGACACGTCTGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSRVLRS*TRLVTF
Trigger: GAAAGTCACCAGACGTGTCCAAGAGCGGAGGACCCT...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTAGGGACCACGTCCCTTaGAGGGCAGAGACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVRDHVP*RAETLG
Trigger: ACCCAGGGTCTCTGCCCTCCAAGGGACGTGGTCCCT...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCTCCATCCCTAGTGTaGATCTGCAGACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLAPSLV*ICRPGG
Trigger: CCCTCCAGGTCTGCAGATCCACACTAGGGATGGAGC...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGTCCTCGCTAGGCTCCTaGACGCTGCTCAGACGGCTG +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPESSLGS*TLLRRL
Trigger: CAGCCGTCTGAGCAGCGTCCAGGAGCCTAGCGAGGA...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570932.5
3UTR CAA 72 bp CTTGGGTTCATGGTATCTTTCTCCCCTCCCGGAAGCTaGTGGGCTCTGGCTGGCTGTGCCCGGGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGFMVSFSPPGS*WALAGCARGSS
Trigger: AGAGGAGCCCCGGGCACAGCCAGCCAGAGCCCACAAGCTTCCGGGAGGGGAGAAAGATACCATGAACCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTTCCGCAGGTAGCCCTTaGGGTCCCCCAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPSAGSP*GPPVGR
Trigger: TCTGCCCACTGGGGGACCTCAAGGGCTACCTGCGGA...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAACGAAATTGTTGCGATaGAGGTGCAGGACGCCACAG +
Preference number: 4 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTTKLLR*RCRTPQ
Trigger: CTGTGGCGTCCTGCACCTTCATCGCAACAATTTCGT...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGGGCAGAAGCCAGCTTaGTGGCAGACACCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWGQKPA*WQTPRH
Trigger: GTGGCGAGGTGTCTGCCATCAAGCTGGCTTCTGCCC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCGCTGGACGTGTCGGTaGAGATGCCTGAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWRWTCR*RCLRWP
Trigger: AGGCCACCTCAGGCATCTTCACCGACACGTCCAGCG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCAGTGGCCGACGGGCTaGAGACCTCATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEQWPTG*RPHSHH
Trigger: ATGGTGGCTATGAGGTCTTCAGCCCGTCGGCCACTG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR TCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTAGAGCTGTTGCCTTCTaGTCTCAGCGGAACCGGGGT +
Preference number: 4 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTRAVAF*SQRNRG
Trigger: ACCCCGGTTCCGCTGAGATCAGAAGGCAACAGCTCT...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCGGCACTGGCCCCTTTTaGGTGTGTATGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: LGPWRRLPWPSSAGSRRPGTGPF*VCMCVQ
Trigger: CTGTACACACATACACACTCAAAAGGGGCCAGTGCC...GGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CAGACCCTGAGGCTCCAGCACGTTGAGAGTAGATCAAAAGATCCTTTCAGCAGGTGGGGCGCAGGCCCCTaGAGGGCGAGACCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: QTLRLQHVESRSKDPFSRWGAGP*RARPSG
Trigger: GCCACTGGGTCTCGCCCTTCAGGGGCCTGCGCCCCA...CCTGCTGAAAGGATCTTTTGATCTACTCTCAACGTGCTGGAGCCTCAGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTACACTGCTGGGAGGGTaGTGGATCGGGGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSTLLGG*WIGVGA
Trigger: TGCCCCCACCCCGATCCATCACCCTCCCAGCAGTGT...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGTTGCTTAGGGGCCTCTaGGGGGAGGCTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLLLRGL*GEALCE
Trigger: CTCACAGAGAGCCTCCCCTCAGAGGCCCCTAAGCAA...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGCATTCAAGTCATTGGTaGAGCTGCCGCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVHSSHW*SCRLAE
Trigger: CTCGGCCAAGCGGCAGCTTCACCAATGACTTGAATG...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGTAGAAAAATGCTCCTaGACTTTGGGGACTGGATGG +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHVEKCS*TLGTGW
Trigger: CCATCCAGTCCCCAAAGTTCAGGAGCATTTTTCTAC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACGTGTGGCTCTGGCCCTaGCCTTCTGTGTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDVWLWP*PSVWSS
Trigger: AGAGGACCACACAGAAGGTCAGGGCCAGAGCCACAC...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAGTGGACTTGAGGAGCTaGACTGAGCGCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTVDLRS*TERPGC
Trigger: GCAGCCTGGGCGCTCAGTGCAGCTCCTCAAGTCCAC...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGACGCTGGCACTAGCCTaGAGCTCCTTCACCACCACC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPETLALA*SSFTTT
Trigger: GGTGGTGGTGAAGGAGCTGCAGGCTAGTGCCAGCGT...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGTGTACGCCAGCACCTaGTGGTCCGAGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWVYAST*WSECWG
Trigger: TCCCCAGCACTCGGACCAGCAGGTGCTGGCGTACAC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTTGGGCAGCTTGAGCTaGTGCTCCCGGACCGTGTAC +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVLGSLS*CSRTVY
Trigger: GTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAA...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTTCCGACAGGGTCAGCTaGAGCTGGGGCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPSDRVS*SWGLGS
Trigger: GCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGA...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGTCGGCTGTGGGCCGCTaGTCGGGCTGCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRASAVGR*SGCSQQ
Trigger: CTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGA...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCCAGCGAGGCGGCGGTaGTGCCGTCAGAGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPPARRR*CRQSRR
Trigger: ACGACGACTCTGACGGCAGCACCGCCGCCTCGCTGG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTACTCTGGACAGCGGCTaGCGCTGTTGTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTTLDSG*RCCCWL
Trigger: CAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGT...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCGGGAGAGCTGCTGCTaGCATTCAGGGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEERESCC*HSGQKP
Trigger: TGGCTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCCACCTCGGGAGAGCTaGTGCTGCCATTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHPPRES*CCHSGQ
Trigger: CTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGGTGG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGACAGACGGCTGCCCAGTaGTCGGCAGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRQTAAQ*SAGPAL
Trigger: CAGAGCTGGGCCTGCCGAGCACTGGGCAGCCGTCTG...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAACCTGCTCAGACGGCTaGCCAGTGCTCGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRTCSDG*PVLGRP
Trigger: GGGCCTGCCGAGCACTGGGCAGCCGTCTGAGCAGGT...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACACGGCCTTCTTCTTaGGTTCCAGGTCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTATRPSS*VPGPRR
Trigger: TCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGT...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCTCCGAGTCAGACACGTaGGTGATGGAGAAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLSESDT*VMEKRD
Trigger: GTCCCGCTTCTCCATCACGCACGTGTCTGACTCGGA...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGGTCACCATCCTCGCTaGTGCCTGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRGHHPR*CLAGAP
Trigger: CGGAGCCCCTGCCAGGCAGCAGCGAGGATGGTGACC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCACCCAGGGCCACTCCTTaGCCTGAGCCACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPPRATP*PEPPGT
Trigger: GGTTCCTGGTGGCTCAGGGCAAGGAGTGGCCCTGGG...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTAAATATTCCCTGTGCTaGCCTGCCCCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVAKYSLC*PAPSST
Trigger: GGTGGAGCTGGGGGCAGGGCAGCACAGGGAATATTT...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTTGTCACCCTTGGAGCTaGCTGACATCCCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATCHPWS*LTSPIL
Trigger: CAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACA...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGGACGGAACCCTGCCTaGCCACCCCAGGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSGRNPA*PPQGLL
Trigger: AAGCAAACCCTGGGGTGGGCAGGCAGGGTTCCGTCC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAGACCCTGAGGCTCCAGCACGTTGAGAGTAGATCAAAAGATCCTTTCAGCAGGCTGAGGCCAGCGCCCTaGCCGCCCAACAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: QTLRLQHVESRSKDPFSRLRPAP*PPNSSP
Trigger: GGGGGAGCTGTTGGGCGGGCAGGGCGCTGGCCTCAG...CCTGCTGAAAGGATCTTTTGATCTACTCTCAACGTGCTGGAGCCTCAGGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGCAGTGAGCTACAATTaGACCACTGCATTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTAVSYN*TTAFQP
Trigger: GGGCTGGAATGCAGTGGTGCAATTGTAGCTCACTGC...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCTGAGGGGGCTGAACTaGCCTTACCTGGTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVALRGLN*PYLVRL
Trigger: AAGCCTCACCAGGTAAGGGCAGTTCAGCCCCCTCAG...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGACTGGATGGAGATaGTCTGGGTTGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHGTGWR*SGLALA
Trigger: GGCCAGGGCCAACCCAGAGCATCTCCATCCAGTCCC...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCAGTCCTCAGACCCCATaGTGCCTCCAACTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGSPQTP*CLQLSL
Trigger: AAGGCTCAGTTGGAGGCAGCATGGGGTCTGAGGACT...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGCCTTGTGCCCACCTCTaGCAGGTATTTTCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVPCAHL*QVFSRH
Trigger: GTGCCGAGAAAATACCTGGCAGAGGTGGGCACAAGG...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTTCCTTCACCACCACCTaGGCACTGCTGATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATSFTTT*ALLMPE
Trigger: CTCTGGCATCAGCAGTGCCCAGGTGGTGGTGAAGGA...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGATCAGAGTCGTCGTCCTaGTCCGCGGTGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGSESSS*SAVAGG
Trigger: TCCACCTGCCACCGCGGACCAGGACGACGACTCTGA...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTCTCCTCCGAGGGAAGTaGGGCTCCCTCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPLLRGK*GSLLGW
Trigger: CCATCCCAGGAGGGAGCCCCACTTCCCTCGGAGGAG...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCGCAGGTGCTGGGCTCTaGGGAGGACCCTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSAGAGL*GGPFKL
Trigger: CAGCTTGAAGGGTCCTCCCCAGAGCCCAGCACCTGC...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCCGGGTCTAGGGCCATaGCGAAGGCTGCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPPGLGP*RRLPWP
Trigger: CGGCCAAGGCAGCCTTCGCCATGGCCCTAGACCCGG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCTCTGGGGCGGAGCATaGCCGATCTACCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWLWGGA*PIYHPG
Trigger: CCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAGHASS*FKCPVS
Trigger: GCTCACAGGACACTTAAACCAGGACGAGGCATGGCC...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAGCAGCCTGTTCCCTGTaGGAAGGGTGGGCTTACGGG +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTAACSL*EGWAYG
Trigger: CCCGTAAGCCCACCCTTCCCACAGGGAACAGGCTGC...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGCCCCCACTCTCCTTTaGCAGCTGGGGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSAPTLL*QLGHRT
Trigger: GGTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGC...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCTGGCATCGGGTTCCTaGCACAGCCCCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRALASGS*HSPSCP
Trigger: TGGACAGGAGGGGCTGTGCCAGGAACCCGATGCCAG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGGGTGATGGATCGGGGTaGGGGCACCCTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMGDGSG*GHPALS
Trigger: AGACAAGGCAGGGTGCCCCCACCCCGATCCATCACC...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTGTCCCCTCCGGGGGTaGGGACTCCAAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVCPLRG*GLQRER
Trigger: CCTTTCTCTTTGGAGTCCCCACCCCCGGAGGGGACA...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGCTCTTCCCGGGTAGCTaGACGGAGTCTGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALLFPGS*TESACP
Trigger: CGGGCAGGCAGACTCCGTCCAGCTACCCGGGAAGAG...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACACTCCAGGGCTCAAGTaGTTCCTCCTGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDTPGLK*FLLLWP
Trigger: AGGCCAAAGCAGGAGGAACCACTTGAGCCCTGGAGT...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGCCACGCAGTCTGCCTaGTCTGACAACTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEATQSA*SDNSAG
Trigger: CCCAGCTGAGTTGTCAGACCAGGCAGACTGCGTGGC...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGAGATGCTCTGGGTTaGCCCTGGCCACCACCTTGC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHGDALG*PWPPPC
Trigger: GCAAGGTGGTGGCCAGGGCCAACCCAGAGCATCTCC...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCTCCTCACGGGTTGAGTaGGCCACTCCCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSSSRVE*ATPLVP
Trigger: AGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGA...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACCCAAGCCCCACAACGTaGACCCAAGACACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDPSPTT*TQDTGS
Trigger: GGAGCCAGTGTCTTGGGTCCACGTTGTGGGGCTTGG...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp TTCTCGGCACTCAGTCGCCTGCTAGATAACCTGGGCTaGCACACGGTGCTGGCCCCAGTGACAGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: FSALSRLLDNLG*HTVLAPVTVAH
Trigger: GTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCGACTGAGTGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGCTGTTGTTGTTGGCTaGCACGTTGGAGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVAVVVG*HVGAPV
Trigger: CACTGGCGCTCCAACGTGTCAGCCAACAACAACAGC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGGTCGGTGAAGATGCCTaGGGTGGCCTCGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPVGEDA*GGLGRV
Trigger: GACACGGCCGAGGCCACCTCAGGCATCTTCACCGAC...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTCGGAAACCCCAGGCCTaGGACAGACCTGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPRKPQA*DRPAQT
Trigger: CGTCTGAGCAGGTCTGTCTCAGGCCTGGGGTTTCCG...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCAAAGAGGTAGACGGTaGCGTCGTCGAAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWQRGRR*RRRRRT
Trigger: TGTCCTTCTTCGACGACGTCACCGTCTACCTCTTTG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCAAAGAGGTAGACGGTaGCGTCGTCGAAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDQRGRR*RRRRRT
Trigger: TGTCCTTCTTCGACGACGTCACCGTCTACCTCTTTG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTANSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCAGCGGAGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCAGGGATTCTTCTCGTTaGGGCCACTGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AAELLVRLVAVLTVLLLLRDSSR*GHCFCR
Trigger: TCTGCAGAAGCAGTGGCCTCAACGAGAAGAATCCCT...GAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCTCCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR TCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCGGTGAGCTGCACTGGTaGCAACAGCCCTTACCTGGC +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSGELHW*QQPLPG
Trigger: GCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACC...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACTGCACCGATCAAAGCTaGAAAAAGCCGGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: RTPRGAEAPESAANSHQDCTDQS*KKPGIQ
Trigger: CTGGATCCCCGGCTTTTTTCAGCTTTGATCGGTGCA...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGGGCGAGAGGATCTCTTaGGCCCAGGGGTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVGERIS*AQGFEI
Trigger: GATCTCGAACCCCTGGGCTCAAGAGATCCTCTCGCC...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACGCAGTCTGCCTGGTCTaGCAACTCAGCTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDAVCLV*QLSWDW
Trigger: CCAATCCCAGCTGAGTTGTCAGACCAGGCAGACTGC...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCAGTCCTCTCTGTACTTaGAGTGAGCCAGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSSPLCT*SEPGHS
Trigger: ACTATGGCCTGGCTCACTGCAAGTACAGAGAGGACT...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGCCCGCGCCAAGCTTCTaGGAGGGTAGTGGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAPAPSF*EGSGRR
Trigger: GCGGCGACCACTACCCTCGCAGAAGCTTGGCGCGGG...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTACTCTGGACAGCGGCTaGCGCTGTTGTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVTLDSG*RCCCWL
Trigger: CAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGT...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCTCCTGGGCAGAGGCTaGCTGGAGCCCAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPLLGRG*LEPKQR
Trigger: CCTCTGCTTGGGCTCCAGGCAGCCTCTGCCCAGGAG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTCCACCTCGGGAGAGCTaGTGCTGCCATTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSPPRES*CCHSGQ
Trigger: CTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGGTGG...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGTCCGAGTCAGACACGTaGGTGATGGAGAAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPESESDT*VMEKRD
Trigger: GTCCCGCTTCTCCATCACGCACGTGTCTGACTCGGA...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGTCCGAGTCAGACACGTaGGTGATGGAGAAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEESESDT*VMEKRD
Trigger: GTCCCGCTTCTCCATCACGCACGTGTCTGACTCGGA...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACGGAACAAGAAAACATTaGACCAGCGTTCTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHGTRKH*TSVLSL
Trigger: GAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCC...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGAGGCCAGCTGTCAGGTaGTATGCGGGGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMRPAVR*YAGSPA
Trigger: TGCTGGTGACCCCGCATAGCACCTGACAGCTGGCCT...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGACCAACGACAGGTCTaGCCCCCTCCTCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRADQRQV*PPPQLM
Trigger: CATCAGCTGAGGAGGGGGGCAGACCTGTCGTTGGTC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGTCCACGTGCCATCTGTaGTGTCACCCTTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPESTCHL*CHPWSC
Trigger: GCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGA...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCGTCTTCATGTCCACGTaGCATCTGTGCTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAVFMST*HLCCHP
Trigger: AGGGTGACAGCACAGATGGCACGTGGACATGAAGAC...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCATTTGGCCTCTCAGAGTaGTGGGATTCTAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPFGLSE*WDSRQE
Trigger: CTCCTGCCTAGAATCCCAGCACTCTGAGAGGCCAAA...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGAGCCTTGTGTTTCCTTaGAGCGCCGATGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVSLVFP*SADVEV
Trigger: CACTTCCACATCGGCGCTGCAAGGAAACACAAGGCT...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCACGGCGAGGGAGGATaGCCAGGACAGCTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPHGEGG*PGQLAE
Trigger: CTCAGCGAGCTGTCCTGGCCATCCTCCCTCGCCGTG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCACTGGGCCAGGCACTaGAGCAGGTTGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHHWARH*SRLLCF
Trigger: GAAGCACAGCAACCTGCTCCAGTGCCTGGCCCAGTG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCTTGAGGTCCCCCAGTaGGCAGAACTCCATCACCAG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEELEVPQ*AELHHQ
Trigger: CTGGTGATGGAGTTCTGCCCACTGGGGGACCTCAAG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGCTTGAGGTCCCCCAGTaGGCAGAACTCCATCACCAG +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPELEVPQ*AELHHQ
Trigger: CTGGTGATGGAGTTCTGCCCACTGGGGGACCTCAAG...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCCTTCGGTGGCGCCCTTaGCACACAGGTAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSLRWRP*HTGRTA
Trigger: TGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAG...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACCTCCTCTGCTTCGGTaGCGCCCTTGGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPPPLLR*RPWHTG
Trigger: ACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGG...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGCCTCCTCTGCTTCGGTaGCGCCCTTGGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALPPLLR*RPWHTG
Trigger: ACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGG...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCATCAGAGTCGTCGTCCTaGTCCGCGGTGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPSESSS*SAVAGG
Trigger: TCCACCTGCCACCGCGGACCAGGACGACGACTCTGA...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGGTCACCCCCACTACTaGCTGTCTCTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAGHPHY*LSLSRR
Trigger: CCTCCTGGACAGAGACAGCCAGTAGTGGGGGTGACC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTTGCCCTCAGCCTCCGTaGCAAGCTTGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSCPQPP*QAWALP
Trigger: AGGCAGAGCCCAAGCTTGCCACGGAGGCTGAGGGCA...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCATGCCCTCAGCCTCCGTaGCAAGCTTGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPCPQPP*QAWALP
Trigger: AGGCAGAGCCCAAGCTTGCCACGGAGGCTGAGGGCA...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCCATAGCCACCATCACTaGCTGAGGACGGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLHSHHH*LRTGCP
Trigger: TGGACATCCCGTCCTCAGCCAGTGATGGTGGCTATG...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR CCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGCACCCTCTTCCGCTGTaGAGCCATTTGGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEHPLPL*SHLGSH
Trigger: ATGGCTCCCCAAATGGCTCCACAGCGGAAGAGGGTG...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGCTTCAGGTCCTCTCTTaGACTCGGCGTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEELQVLS*TRRPSQ
Trigger: CTGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAG...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGCAGCCTGTTCCCTGTaGGAAGGGTGGGCTTACGGG +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPAACSL*EGWAYG
Trigger: CCCGTAAGCCCACCCTTCCCACAGGGAACAGGCTGC...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCTCTCCTTTGGCAGCTaGGGCACAGGACCAGATACT +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATLSFGS*GTGPDT
Trigger: AGTATCTGGTCCTGTGCCCCAGCTGCCAAAGGAGAG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGCCCCTCACTCCCACTaGCAATGTCACAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSAPHSH*QCHKGL
Trigger: GAGGCCCTTGTGACATTGCCAGTGGGAGTGAGGGGC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGCTACACCTGGAGTGTaGGGCCTGGTCCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPATPGV*GLVPPH
Trigger: ATGGGGAGGGACCAGGCCCCACACTCCAGGTGTAGC...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGAGGGTACACGCCTCTaGTCACATGGCCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAEGTRL*SHGHGA
Trigger: GGCTCCATGGCCATGTGACCAGAGGCGTGTACCCTC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGGAGTCTGGCCTGGACTaGATCCCAGCTGTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEESGLD*IPAVLG
Trigger: GCCTAGAACAGCTGGGATCCAGTCCAGGCCAGACTC...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGATCGGGCAGCCCAGGTaGCACAATTCACCCATGGCT +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMIGQPR*HNSPMA
Trigger: AGCCATGGGTGAATTGTGCCACCTGGGCTGCCCGAT...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGTGTCCCAGCCAGCCTTaGGCTCTGGCCTGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPCPSQP*ALACAL
Trigger: GAGAGCGCAGGCCAGAGCCCAAGGCTGGCTGGGACA...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGCCCGGCTCTGGGTCTaGAGTCACCCAACTGGTCGA +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPARLWV*SHPTGR
Trigger: TCGACCAGTTGGGTGACTCCAGACCCAGAGCCGGGC...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTCTGTCCGCCCGGCTCTaGGTCTGGAGTCACCCAACT +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSLSARL*VWSHPT
Trigger: AGTTGGGTGACTCCAGACCCAGAGCCGGGCGGACAG...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCCCAAGCGCCCACGCTaGACCCGATTCCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPPKRPR*TRFQKG
Trigger: GCCCTTCTGGAATCGGGTCCAGCGTGGGCGCTTGGG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGAAAGCCACTTGCAGTTaGCCAAGAGACTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTKATCS*PRDSPI
Trigger: GATTGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTT...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGGAGGGCAGAGACCCTaGGTAGCAGTGCCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAGGQRP*VAVPVG
Trigger: CCCCACCGGCACTGCTACCCAGGGTCTCTGCCCTCC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGTGGATGGAGATGCTCTaGGTTGGCCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWWMEML*VGPGHH
Trigger: GTGGTGGCCAGGGCCAACCCAGAGCATCTCCATCCA...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCCTCCTTGGGTTCATaGTATCTTTCTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATPSLGS*YLSPLP
Trigger: CGGGAGGGGAGAAAGATACCATGAACCCAAGGAGGG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGTGCACGAGTTGGGTATaGACCTCCTTCCGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEECTSWV*TSFRFP
Trigger: CGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCA...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp ACGGTGACGTCGTCGAAGAAGGACACGGCCTTCTTCTaGCGTTCCAGGTCCTCGCAGAAGGTCTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: TVTSSKKDTAFF*RSRSSQKVSDS
Trigger: GCTGTCCGAGACCTTCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTCCTTCTTCGACGACGTCACCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
3UTR CAA 72 bp CGTCTTCATGTCCACGTGCCATCTGTGCTGTCACCCTaGGAGCTGCCTGACATCCCCCATCCTGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RLHVHVPSVLSP*ELPDIPHPVLC
Trigger: GCACAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCACGTGGACATGAAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp CTCTGGGTGCTGGGCCTTCTCTACTGGGTCCCCTCCTaGGGTTCATGGTATCTTTCTCCCCTCCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LWVLGLLYWVPS*GSWYLSPLPEA
Trigger: AGCTTCCGGGAGGGGAGAAAGATACCATGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAGCACCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CGCCTGCTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTACGAAATTGTTGCGATaGAGGTGCAGGACGCCACAG +
Preference number: 4 (lower is better)
Translates to: RLLDNLGLHTVLAPVTVATKLLR*RCRTPQ
Trigger: CTGTGGCGTCCTGCACCTTCATCGCAACAATTTCGT...AGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAGCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CTAGATAACCTGGGCTTGCACACGGTGCTGGCCCCAGTGACAGTCGCTCACTCTGCTGTTGTTGTTGGCTaGCACGTTGGAGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LDNLGLHTVLAPVTVAHSAVVVG*HVGAPV
Trigger: CACTGGCGCTCCAACGTGTCAGCCAACAACAACAGC...AGAGTGAGCGACTGTCACTGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCTCAGCCTCGAGGTCTaGGAAGTAGGCAGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWLSLEV*EVGRVS
Trigger: CGAGACTCTGCCTACTTCTCAGACCTCGAGGCTGAG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGAGAGCTGTTGCCTTCTaGTCTCAGCGGAACCGGGGT +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWRAVAF*SQRNRG
Trigger: ACCCCGGTTCCGCTGAGATCAGAAGGCAACAGCTCT...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCCAAAGAGGTAGACGGTaGCGTCGTCGAAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLQRGRR*RRRRRT
Trigger: TGTCCTTCTTCGACGACGTCACCGTCTACCTCTTTG...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTAGTCAGACACGTGCGTaGTGGAGAAGCGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPSQTRA*WRSGTW
Trigger: CCACGTCCCGCTTCTCCATCACGCACGTGTCTGACT...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCAACAGCCACGGACTTTaGGATAAGGGCAGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLNSHGL*DKGSGN
Trigger: GTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTT...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLAYGSS*VSEGET
Trigger: TGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGC...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCGGTTCAGGCCTGTCTTaGATCCCCAGCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSGSGLS*IPSLSG
Trigger: ACCACTGAGGCTGGGGATTCAAGACAGGCCTGAACC...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGGTCCAGGTTTGAGCTaGCGCTCACTCCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRGPGLS*RSLRGP
Trigger: TGGTCCCCGGAGTGAGCGTCAGCTCAAACCTGGACC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCATGCTGCCTCCAACTaGGCCTTGTGTTTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: DFEIRAAETGPTRAPRATHAASN*ALCFLA
Trigger: TGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATG...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCACGACGAGCAGGTTaGTATGCACCTCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWPRRAG*YAPRPP
Trigger: TGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCATTGGGCAGCTTGAGCTaGTGCTCCCGGACCGTGTAC +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPLGSLS*CSRTVY
Trigger: GTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAA...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACATGCAGCCAGCAGAACTaGATCACCTCGTACCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTCSQQN*ITSYQR
Trigger: CCGCTGGTACGAGGTGATGCAGTTCTGCTGGCTGCA...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCATGTCCTCATCCTCACTaGTGGGTGCCTCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPCPHPH*WVPPPR
Trigger: CCGAGGTGGAGGCACCCAGCAGTGAGGATGAGGACA...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGAGCTGTCAGGTGCTATaGGGGGTCACCAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVSCQVL*GVTSRV
Trigger: CACTCTGCTGGTGACCCCGCATAGCACCTGACAGCT...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGGGGTCAGGCAGCCTTaGAGACAGCGCCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAGVRQP*RQRLVL
Trigger: GAGGACCAGGCGCTGTCTGCAAGGCTGCCTGACCCC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGCAGTCCCGTCCCTGCTaGGTCTTCATGTCCACGTGC +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALQSRPC*VFMSTC
Trigger: GCACGTGGACATGAAGACGCAGCAGGGACGGGACTG...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGCACAGTCCCGTCCCTaGTGCGTCTTCATGTCCACG +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPAQSRP*CVFMST
Trigger: CGTGGACATGAAGACGCAGCAGGGACGGGACTGTGC...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACGAAAGCTTAGGGAGCTaGCTCTGCCCTGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDESLGS*LCPVPL
Trigger: AAGAGGCACAGGGCAGAGGCAGCTCCCTAAGCTTTC...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCAGGCAGGAGCCACTATaGCCAGCCAGCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSRQEPL*PASPIS
Trigger: AGAAATGGGGCTGGCTGGGCATAGTGGCTCCTGCCT...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTATTGCCACCCTGTCATaGCCCAGCTTTGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPIATLS*PSFGPW
Trigger: CCAGGGCCCAAAGCTGGGGCATGACAGGGTGGCAAT...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTGTATATTTGGGATGTaGCAGGGTGTCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWCIFGM*QGVQEQ
Trigger: CTGCTCCTGGACACCCTGGCACATCCCAAATATACA...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGTTCCCGCTCTTGGTCTaGTCCACGACGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMFPLLV*STTSRL
Trigger: CAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAA...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCAAAGAGCTCCCAGATaGTCACGCCCAGGGACCACA +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAQRAPR*SRPGTT
Trigger: TGTGGTCCCTGGGCGTGACCATCTGGGAGCTCTTTG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGCAGGTGCTGGGCTCTaGGGAGGACCCTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRAGAGL*GGPFKL
Trigger: CAGCTTGAAGGGTCCTCCCCAGAGCCCAGCACCTGC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCCCCGAGCTCCCGGGTaGGGCTTTCCTGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPPRAPG*GFPGQR
Trigger: TCTTTGACCAGGAAAGCCCCACCCGGGAGCTCGGGG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCACGCTGTGGAGCCATTTaGGGAGCCATCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPRCGAI*GAISLL
Trigger: CAGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCG...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GTCGTCGAAGAAGGACACGGCCTTCTTCTTGCGTTCCAGGTCCTCGCAGAAGGTCGCTGTGGAGCCATTTaGGGAGCCATCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VVEEGHGLLLAFQVLAEGRCGAI*GAISLL
Trigger: CAGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCG...ACCTTCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTCCTTCTTCGACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACACCCTCTTCCGCTGTaGAGCCATTTGGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTHPLPL*SHLGSH
Trigger: ATGGCTCCCCAAATGGCTCCACAGCGGAAGAGGGTG...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCTTCAGGTCCTCTCTTaGACTCGGCGTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWLQVLS*TRRPSQ
Trigger: CTGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCTTCAGGTCCTCTCTTaGACTCGGCGTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHLQVLS*TRRPSQ
Trigger: CTGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGACGAATTCTGCCTCTaGGGCGGAGCATGGCCGATC +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPDEFCL*GGAWPI
Trigger: GATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGGGAGCGCCCGCACCCTaGCTGGAAGATGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPGAPAP*LEDELP
Trigger: GGGAAGTTCATCTTCCAGCCAGGGTGCGGGCGCTCC...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGTTAAGGGAGGACATTTaGCCAGCTGGTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEELREDI*PAGGWE
Trigger: CTCCCAGCCACCAGCTGGCCAAATGTCCTCCCTTAA...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGTGGGCCTGGCCTGGTaGGGGAGCCACCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAVGLAW*GSHQTG
Trigger: ACCAGTTTGGTGGCTCCCCCACCAGGCCAGGCCCAC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGACAGAGCCACCCAGTGTaGATGGTTCAGCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGQSHPV*MVQHAP
Trigger: TGGAGCGTGCTGAACCATCCACACTGGGTGGCTCTG...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCAGGGACCAATGTCTGTaGCTAACGTGTGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTARDQCL*LTCGDL
Trigger: AAGGTCACCACACGTTAGCCACAGACATTGGTCCCT...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACATCATTGGGTAGTTCGTaGCAATCGCTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTSLGSS*QSLPRA
Trigger: GGCCCTGGGCAGCGATTGCCACGAACTACCCAATGA...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACTTCTCGTGCAGTCACTaGCCTCTCCAGTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDFSCSH*PLQWFS
Trigger: GGAGAACCACTGGAGAGGCCAGTGACTGCACGAGAA...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMAYGSS*VSEGET
Trigger: TGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGC...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCATGGTCTTGCCCCACTTaGGTCTGGCCTGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPWSCPT*VWPGLD
Trigger: ATCCAGTCCAGGCCAGACTCAAGTGGGGCAAGACCA...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCCGAGTGCTTTCAACTTCTTGTCTTaGGTCGTATTTGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: QAPSRESQSPSCVPTPSAFNFLS*VVFVHQ
Trigger: CTGATGCACAAATACGACTCAAGACAAGAAGTTGAA...AGCACTCGGAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGGATGAGAATCGGCTGTaGTTCGGGGCAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVDENRL*FGAGVR
Trigger: TCTCACTCCTGCCCCGAATCACAGCCGATTCTCATC...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTTTCAAACTCCTCCTCTaGTTCGGTGGCGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPFKLLL*FGGALG
Trigger: GCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAA...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTAGAGGCTCACAAACCTaGCAGTGTCTCGGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPRGSQT*QCLGAM
Trigger: CATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCAAGCACGTAATTCCCTaGAGGTCCGGCAGCTACACC +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSKHVIP*RSGSYT
Trigger: GGTGTAGCTGCCGGACCTGCAGGGAATTACGTGCTT...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGTTTCAGGAATCCCTTTaGCCACGTCCAGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEFQESL*PRPAEA
Trigger: GGCTTCAGCTGGACGTGGGCAAAGGGATTCCTGAAA...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCACCAAACTGGTGTGTaGCCGGTTCAGGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHHQTGV*PVQACL
Trigger: AAGACAGGCCTGAACCGGGCACACACCAGTTTGGTG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACCCCAGAGGTGGAGGTTaGAGTGAGCTACAATTGCAC +
Preference number: 4 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDPRGGG*SELQLH
Trigger: GTGCAATTGTAGCTCACTGCAACCTCCACCTCTGGG...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACCTCAGACCCCATGCTaGCTCCAACTGAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPPQTPC*LQLSLV
Trigger: CACAAGGCTCAGTTGGAGGCAGCATGGGGTCTGAGG...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCATAGCCACCATCACTaGCTGAGGACGGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVHSHHH*LRTGCP
Trigger: TGGACATCCCGTCCTCAGCCAGTGATGGTGGCTATG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACAGCCACCAGGACGTaGTCCCCACCTTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPTATRT*SPPSRS
Trigger: TGACCGAGAAGGTGGGGACCACGTCCTGGTGGCTGT...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHGHASS*FKCPVS
Trigger: GCTCACAGGACACTTAAACCAGGACGAGGCATGGCC...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAGHASS*FKCPVS
Trigger: GCTCACAGGACACTTAAACCAGGACGAGGCATGGCC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCTGGAGTCACCCAACTaGTCGAAATGCATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWLESPN*SKCICD
Trigger: GTCACAAATGCATTTCGACCAGTTGGGTGACTCCAG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGCCACAGGCAGATCATaGATCTGTCTTCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: TPRGAEAPESAANSHQDVATGRS*ICLLSL
Trigger: CAGTGAAAGAAGACAGATCCATGATCTGCCTGTGGC...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGCCTACACCTGTGTCTaGGCGGGTCCTGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAAYTCV*AGPASH
Trigger: GTGGGAAGCAGGACCCGCCCAGACACAGGTGTAGGC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGAGCTCCATAGGCACTaGAGCCAGGTGTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRELHRH*SQVLGP
Trigger: TGGGCCCAACACCTGGCTCCAGTGCCTATGGAGCTC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGCTGGGCCTTCTCTACTaGGTCCCCTCCTTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALLGLLY*VPSLGS
Trigger: TGAACCCAAGGAGGGGACCCAGTAGAGAAGGCCCAG...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp GAGGGTACACGCCTCTGGTCACATGGCCATGGAGCCTaGGGTACCCCTGAGTTAAGGGAGGACATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: EGTRLWSHGHGA*GTPELREDIWP
Trigger: TGGCCAAATGTCCTCCCTTAACTCAGGGGTACCCAAGGCTCCATGGCCATGTGACCAGAGGCGTGTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp TTTCCTTTGCTGGCTGGAGAGGTGCTGGTGGTGTCATaGGGTAGTTCGTGGCAATCGCTGCCCAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: FPLLAGEVLVVS*GSSWQSLPRAM
Trigger: CATGGCCCTGGGCAGCGATTGCCACGAACTACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp GGTCCTCCGCTCTTGGACACGTCTGGTGACTTTCCTTaGCTGGCTGGAGAGGTGCTGGTGGTGTCATTGGGT +
Preference number: 4 (lower is better)
Translates to: GPPLLDTSGDFP*LAGEVLVVSLG
Trigger: ACCCAATGACACCACCAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGACGTGTCCAAGAGCGGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp CCACGCAGTCTGCCTGGTCTGACAACTCAGCTGGGATaGGGGGTGTCGAAAGCCACTTGCAGTTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRSLPGLTTQLG*GVSKATCSWPR
Trigger: TCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTCAGACCAGGCAGACTGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp CTCTGGAGTCCGGGTCTGAGTCCATTTCCTCACGGGTaGAGTGGGCCACTCCCCTGGTGCCTGGTGTATATT +
Preference number: 4 (lower is better)
Translates to: LWSPGLSPFPHG*SGPLPWCLVYI
Trigger: AATATACACCAGGCACCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATGGACTCAGACCCGGACTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTaGCAGCGCCGATGTGGAAGTGGCCAGATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: DPMLPPTEPCVS*QRRCGSGQILS
Trigger: GCTCAGAATCTGGCCACTTCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCTCAGCCTCGAGGTCTaGGAAGTAGGCAGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPLSLEV*EVGRVS
Trigger: CGAGACTCTGCCTACTTCTCAGACCTCGAGGCTGAG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGCTTACGGGTCTAGCTaGGTCAGTGAAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAAYGSS*VSEGET
Trigger: TGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATAGGGATTCTTCTCGTTaGGGCCACTGCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLAASLKAQTNSASGAEHRDSSR*GHCFCR
Trigger: TCTGCAGAAGCAGTGGCCTCAACGAGAAGAATCCCT...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR TCA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATGTGCCTTTGCCACTaGCTTTCTGATGAGAATCGG +
Preference number: 4 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLMCLCH*LSDENR
Trigger: CCGATTCTCATCAGAAAGTCAGTGGCAAAGGCACAT...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGGTGGCTAACGTGTGGTaGCCTTGCAGTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRAVANVW*PCSGLG
Trigger: CCCAAGGCCACTGCAAGGTCACCACACGTTAGCCAC...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGATCTGGAGTCCGGGTCTaGGTCCATTTCCTCACGGGT +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRSGVRV*VHFLTG
Trigger: ACCCGTGAGGAAATGGACTCAGACCCGGACTCCAGA...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGTGTGCACGAAATTGTTaGGATGAAGGTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: SRGHASSWFKCPVSTPEECARNC*DEGAGR
Trigger: GCGTCCTGCACCTTCATCGCAACAATTTCGTGCACA...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGAGTCCTCTCTGTACTTaGAGTGAGCCAGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLSPLCT*SEPGHS
Trigger: ACTATGGCCTGGCTCACTGCAAGTACAGAGAGGACT...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAACACGGCCTTCTTCTTaGGTTCCAGGTCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPTRPSS*VPGPRR
Trigger: TCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGT...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAACACGGCCTTCTTCTTaGGTTCCAGGTCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPTRPSS*VPGPRR
Trigger: TCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGT...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCACAAAAATATTCCCTGTaGTGCCCTGCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPQKYSL*CPAPSS
Trigger: GGAGCTGGGGGCAGGGCAGCACAGGGAATATTTTTG...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGGAACAAGAAAACATTaGACCAGCGTTCTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTGTRKH*TSVLSL
Trigger: GAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCCCTGCTGCTTCTCCTaGCTAATAAACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVPCCFS*LINRLL
Trigger: GAGAAGCCTGTTTATTAGGCAGGAGAAGCAGCAGGG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTATCCTTTCAGCAGGGTaGCAATGCTTAGACGCCATC +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVILSAG*QCLDAI
Trigger: GATGGCGTCTAAGCATTGGCACCCTGCTGAAAGGAT...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GAAGAAACAGCTGACGCGAGAAGACAGAAAACAGGTGCTGTCCGCCCGGCTCTGGTTAGAGAACAGGCCTaGACCAGTGGAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: EETADARRQKTGAVRPALVREQA*TSGGLP
Trigger: AGGAAGCCCTCCACTGGTGCAGGCCTGTTCTCTAAC...CAGAGCCGGGCGGACAGCACCTGTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTCCCAACTGGTCGAAATaGATTTGTGACGGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVPNWSK*ICDGSV
Trigger: AACGGAGCCGTCACAAATGCATTTCGACCAGTTGGG...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGTGCAAAGCCAGTGCCTaGATCCTTCACAAAGGACGT +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMCKASA*ILHKGR
Trigger: ACGTCCTTTGTGAAGGATGCAGGCACTGGCTTTGCA...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGTCCCTAGTGTGGATCTaGAGACCTGGAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPSLVWI*RPGGLL
Trigger: CAGCAGCCCTCCAGGTCTGCAGATCCACACTAGGGA...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGACTTGAGGTCCCCCAGTaGGCAGAACTCCATCACCAG +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRLEVPQ*AELHHQ
Trigger: CTGGTGATGGAGTTCTGCCCACTGGGGGACCTCAAG...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp GTCGTCGAAGAAGGACACGGCCTTCTTCTTGCGTTCCAGGTCCTCGCAGAAGGTCTCTCCTTTGGCAGCTaGGGCACAGGACCAGATACT +
Preference number: 4 (lower is better)
Translates to: VVEEGHGLLLAFQVLAEGLSFGS*GTGPDT
Trigger: AGTATCTGGTCCTGTGCCCCAGCTGCCAAAGGAGAG...ACCTTCTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTCCTTCTTCGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACACTTGAGTCTGGCCTaGACTGGATCCCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPHLSLA*TGSQLF
Trigger: GAACAGCTGGGATCCAGTCCAGGCCAGACTCAAGTG...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGTGGCTGGAGAGGTGCTaGTGGTGTCATTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: ETATDFEIRAAETGPTRAWLERC*WCHWVV
Trigger: AACTACCCAATGACACCACCAGCACCTCTCCAGCCA...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCTTCACAAAGGACGTTaGTCCCTGTGTCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWLHKGR*SLCLPG
Trigger: ACCAGGGAGACACAGGGACCAACGTCCTTTGTGAAG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGTGCCTGGTGTATATTTaGGATGTGCCAGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMCLVYI*DVPGCP
Trigger: TGGACACCCTGGCACATCCCAAATATACACCAGGCA...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGTGGGTCCAATTCCAGTaGGACTCTGGAGTCCGGGTC +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPWVQFQ*DSGVRV
Trigger: GACCCGGACTCCAGAGTCCCACTGGAATTGGACCCA...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp GACAACTCAGCTGGGATTGGGGGTGTCGAAAGCCACTaGCAGTTGGCCAAGAGACTCCCCAATCCCATTGCC +
Preference number: 4 (lower is better)
Translates to: DNSAGIGGVESH*QLAKRLPNPIA
Trigger: GGCAATGGGATTGGGGAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp GGCCAGATTCTGAGCCGCCTGACTAGAGTTAGTAAGTaGCCTGGCGTTCTCGTGCAGTCACTGGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQILSRLTRVSK*PGVLVQSLASP
Trigger: TGGAGAGGCCAGTGACTGCACGAGAACGCCAGGCAACTTACTAACTCTAGTCAGGCGGCTCAGAATCTGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAACGAAATTGTTGCGATaGAGGTGCAGGACGCCACAG +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPTKLLR*RCRTPQ
Trigger: CTGTGGCGTCCTGCACCTTCATCGCAACAATTTCGT...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGGCACTGGCCCCTTTTaGGTGTGTATGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSGTGPF*VCMCVQ
Trigger: CTGTACACACATACACACTCAAAAGGGGCCAGTGCC...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp AAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAACCCTGGCTGGAAGATaGACTTCCCGTAAGCACGTA +
Preference number: 4 (lower is better)
Translates to: KSPDEFCLWGGAWPIYHPTLAGR*TSRKHV
Trigger: TACGTGCTTACGGGAAGTTCATCTTCCAGCCAGGGT...TGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTATGGGCAGACATCAGTaGTGGAGGTGGAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPMGRHQ*WRWNPH
Trigger: GTGAGGATTCCACCTCCATCACTGATGTCTGCCCAT...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGCTGCCCCCGTCAGGCTaGGATTGGACACAGCATTTG +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRALPPSG*DWTQHL
Trigger: CAAATGCTGTGTCCAATCTCAGCCTGACGGGGGCAG...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCAATTATAGTCAAAGGGTaGCCCCGGCAAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPIIVKG*PRQAAA
Trigger: TGCAGCTGCTTGCCGGGGTCACCCTTTGACTATAAT...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGTGTGCACGAAATTGTTaGGATGAAGGTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWCARNC*DEGAGR
Trigger: GCGTCCTGCACCTTCATCGCAACAATTTCGTGCACA...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGGAACTCAGAGCTGTTaGCTTCTGATCTCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWGTQSC*LLISAE
Trigger: TTCCGCTGAGATCAGAAGGCAACAGCTCTGAGTTCC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAGGAACTCAGAGCTGTTaGCTTCTGATCTCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTGTQSC*LLISAE
Trigger: TTCCGCTGAGATCAGAAGGCAACAGCTCTGAGTTCC...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGCAGTGGCCTTGGGCTaGAGACTTTGTCATATTCTA +
Preference number: 4 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVAVALG*RLCHIL
Trigger: TAGAATATGACAAAGTCTGCAGCCCAAGGCCACTGC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGGCCATGCCTCGTCCTaGTTTAAGTGTCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRGHASS*FKCPVS
Trigger: GCTCACAGGACACTTAAACCAGGACGAGGCATGGCC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGGTGGTGACCTTGCAGTaGCCTTGGGCTGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPVVTLQ*PWAADF
Trigger: AAAGTCTGCAGCCCAAGGCCACTGCAAGGTCACCAC...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGAGTGGGCCACTCCCCTaGTGCCTGGTGTATATTTGG +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPSGPLP*CLVYIW
Trigger: CCAAATATACACCAGGCACCAGGGGAGTGGCCCACT...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp GCAGTGGCCTTGGGCTGCAGACTTTGTCATATTCTATaGGCTCAGTTAGGCCCCCACTCAGCACAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: AVALGCRLCHIL*AQLGPHSAQRA
Trigger: AGCTCGCTGTGCTGAGTGGGGGCCTAACTGAGCCAATAGAATATGACAAAGTCTGCAGCCCAAGGCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGACACGAAGAAACAGCTaGCGCGAGAAGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVTRRNS*REKTEN
Trigger: GTTTTCTGTCTTCTCGCGTCAGCTGTTTCTTCGTGT...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCACTGCCTTTCTGTTGTTaGTTTTCGGCAACAAATTCT +
Preference number: 4 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPLPFCC*FSATNS
Trigger: AGAATTTGTTGCCGAAAATCAACAACAGAAAGGCAG...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTTGTGCACGAAATTGTTaGGATGAAGGTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: LTNLPVSRGHASSWFKCPCARNC*DEGAGR
Trigger: GCGTCCTGCACCTTCATCGCAACAATTTCGTGCACA...AGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGGAACTCAGAGCTGTTaGCTTCTGATCTCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSGTQSC*LLISAE
Trigger: TTCCGCTGAGATCAGAAGGCAACAGCTCTGAGTTCC...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCCTAGAGTTAGTAAGTTaGCTGGCGTTCTCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSLELVS*LAFSCS
Trigger: ACTGCACGAGAACGCCAGGCAACTTACTAACTCTAG...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GTTTTATTTATTGCACGAGTTGGGTATGGACCTCCTTCCGGTTCCCGGCGTGCGACACATTCCCGCTCTTaGTCTGGTCCACGACGAGCA +
Preference number: 4 (lower is better)
Translates to: VLFIARVGYGPPSGSRRATHSRS*SGPRRA
Trigger: TGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGT...CGCACGCCGGGAACCGGAAGGAGGTCCATACCCAACTCGTGCAATAAATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCGGTGGCAGGTGGACTaGGGGCGCAGCCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCARWQVD*GRSRRS
Trigger: ACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCTGGAGAGGTGCTGGTaGTGTCATTGGGTAGTTCGT +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPLERCW*CHWVVR
Trigger: ACGAACTACCCAATGACACCACCAGCACCTCTCCAG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCAACTCAGCTGGGATTaGGGGTGTCGAAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPQLSWD*GCRKPL
Trigger: AAGTGGCTTTCGACACCCCCAATCCCAGCTGAGTTG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAACCACAGGGCCATTATaGGTCCAATTCCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRTTGPL*VQFQWD
Trigger: GTCCCACTGGAATTGGACCCATAATGGCCCTGTGGT...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGGGCCCGTTCTGTGCTaGCGTGGCCGGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKGPVLC*RGRGAL
Trigger: CAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAACGTTGGAGCGCCAGTaGCCGCGCTGGGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKTLERQ*PRWAAL
Trigger: GAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGT...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCCAAAACAAATCCCCCTaGGAAGCAACAATAAACTTT +
Preference number: 4 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAQNKSP*EATINF
Trigger: AAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTG...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAGGAACAAGAAAACATTaGACCAGCGTTCTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTGTRKH*TSVLSL
Trigger: GAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCC...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACGGGCCTTTCCCGCCTaGCTCGCAGCGCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKRAFPA*LAAPAW
Trigger: CCAAGCTGGCGCTGCGAGTCAGGCGGGAAAGGCCCG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACAGCTCCTGCAGGCGTaGGGTGCGGCCAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKQLLQA*GAARAQ
Trigger: CTGAGCCCTGGCCGCACCGCACGCCTGCAGGAGCTG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGAGCCATCAGCCTGCTaGGGCCGGTTGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKEPSAC*GRLGAL
Trigger: CAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTACCACGCGGCTGCACTaGCCTCGGCTGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCATTRLH*PRLWSG
Trigger: CCCAGACCACAGCCGAGGGCAGTGCAGCCGCGTGGT...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGTTCTCGGAATCCTTCTaGTTCACATTCAAGTCATTG +
Preference number: 4 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMFSESF*FTFKSL
Trigger: CAATGACTTGAATGTGAAGCAGAAGGATTCCGAGAA...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAACCCCGGCAAGCAGCTaGAGCCCGGGCCTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKTPASS*SPGLSR
Trigger: GCGGGAAAGGCCCGGGCTGCAGCTGCTTGCCGGGGT...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCTCGGGGGAGGCCCGTaGGGTCTGCTTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCALGGGP*GLLWTG
Trigger: CCCAGTCCAAAGCAGACCCCACGGGCCTCCCCCGAG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAGCTCCCTCCGGACCCTaGGCCTGCGGAGGAACTCGG +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAAPSGP*ACGGTR
Trigger: CCGAGTTCCTCCGCAGGCCCAGGGTCCGGAGGGAGC...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACCGTCAGGTCAGCCGTaGGCAGGCAGTTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKPSGQP*AGSSAG
Trigger: CCCTGCGGAACTGCCTGCTCACGGCTGACCTGACGG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACGGTGCTGGCCCCAGTaGCAGTCGCTCACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKRCWPQ*QSLTLP
Trigger: GGGCAGAGTGAGCGACTGTCACTGGGGCCAGCACCG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCATCACAGGCCATGCGCTaGAGGGTCCGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLASQAMR*RVRGSG
Trigger: TCCCGACCCCCGGACCCTGCAGCGCATGGCCTGTGA...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGCAAAACAAATCCCCCTaGGAAGCAACAATAAACTTT +
Preference number: 4 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEQNKSP*EATINF
Trigger: AAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTG...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTGGGTCTGCTTTGGACTaGGGCAGCCCTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAGSALD*GSPQRG
Trigger: GCCACGCTGAGGGCTGCCCCAGTCCAAAGCAGACCC...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTAGGGGCGAGCGTCCCTaGCCGCTGTCCATACTCGTC +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCARGERP*PLSILV
Trigger: GACGAGTATGGACAGCGGCCAGGGACGCTCGCCCCT...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAGACCCTGAGGCTCCAGCACGTTGAGAGTAGATCAAAAGATCCTTTCAGCAGGACTGGGTCCCCTCCTTaGGTTCATGGTATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLRLQHVESRSKDPFSRTGSPP*VHGIFL
Trigger: GAGAAAGATACCATGAACCCAAGGAGGGGACCCAGT...CCTGCTGAAAGGATCTTTTGATCTACTCTCAACGTGCTGGAGCCTCAGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCACTTGAGGAGCTGCACTaGGCGCCCAGGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLALEELH*APRLLG
Trigger: GCCAAGCAGCCTGGGCGCTCAGTGCAGCTCCTCAAG...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR TCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAGTCGGTGAAGATGCCTaGGGTGGCCTCGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAVGEDA*GGLGRV
Trigger: GACACGGCCGAGGCCACCTCAGGCATCTTCACCGAC...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCCGTCGGGGTCGAAGTaGGAGCTGAAGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAPSGSK*ELKAKL
Trigger: CAGCTTCGCCTTCAGCTCGCACTTCGACCCCGACGG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGGCCGCTGCTCGGGCTaGAGCCAGCAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKGRCSG*SQQNCI
Trigger: GATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCCACCTCGGGAGAGCTaGTGCTGCCATTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAPPRES*CCHSGQ
Trigger: CTGCCCTGAATGGCAGCAGCAGCTCTCCCGAGGTGG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTGGCCTGAGACAGACCTaGTCAGACGGCTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAGLRQT*SDGCPV
Trigger: CACTGGGCAGCCGTCTGAGCAGGTCTGTCTCAGGCC...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGGCTCTGCCTGCGGGTaGTCACCCCCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKGSACG*SPPLLA
Trigger: AGCCAGTAGTGGGGGTGACCACCCGCAGGCAGAGCC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCTCTGGGGCGGAGCATaGCCGATCTACCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCALWGGA*PIYHPG
Trigger: CCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCTCGCAGCGCCAGCTTaGGCTCCTTCGGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCALAAPA*APSGVC
Trigger: ACACACACCCGAAGGAGCCCAAGCTGGCGCTGCGAG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGAAGCTTGTGGGCTCTaGCTGGCTGTGCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKEACGL*LAVPGA
Trigger: AGCCCCGGGCACAGCCAGCCAGAGCCCACAAGCTTC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417379.6
3UTR CAA 72 bp ATCCGTGCTCATCTTGTTCCATTTCAACTTCTTGTCTaGAGTCGTATTTGTGCATCAGCTGTGGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: IRAHLVPFQLLV*SRICASAVAPG
Trigger: CCCCGGGGCCACAGCTGATGCACAAATACGACTCAAGACAAGAAGTTGAAATGGAACAAGATGAGCACGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTGGCACTGGAGCAGGTTaGTGTGCTTCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAGTGAG*CASGPC
Trigger: ACAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCC...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTTCCCCAAAGGGGACGTaGCCAGTGGGTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCASPKGT*PVGPRR
Trigger: TCTTCGAGGACCCACTGGGCACGTCCCCTTTGGGGA...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCGGGAGAGCTGCTGCTaGCATTCAGGGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCARESCC*HSGQKP
Trigger: TGGCTTCTGCCCTGAATGGCAGCAGCAGCTCTCCCG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGGCCTGAGACAGACCTaGTCAGACGGCTGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKGLRQT*SDGCPV
Trigger: CACTGGGCAGCCGTCTGAGCAGGTCTGTCTCAGGCC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAGGAGACCTCCGTGAGTaGCAGGACGTACACGTCGGG +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAGDLRE*QDVHVG
Trigger: CCCGACGTGTACGTCCTGCCACTCACGGAGGTCTCC...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAGCAGCCTGTTCCCTGTaGGAAGGGTGGGCTTACGGG +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAAACSL*EGWAYG
Trigger: CCCGTAAGCCCACCCTTCCCACAGGGAACAGGCTGC...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGGGGAGCCACCAAACTaGTGTGTGCCCGGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKGEPPN*CVPGSG
Trigger: GCCTGAACCGGGCACACACCAGTTTGGTGGCTCCCC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTGCCACCCAGTGTGGATaGTTCAGCACGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAATQCG*FSTLHL
Trigger: CAGGTGGAGCGTGCTGAACCATCCACACTGGGTGGC...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCACAGTGGCCGACGGGCTaGAGACCTCATAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAQWPTG*RPHSHH
Trigger: ATGGTGGCTATGAGGTCTTCAGCCCGTCGGCCACTG...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCAAAACAAATCCCCCTaGGAAGCAACAATAAACTTT +
Preference number: 4 (lower is better)
Translates to: SEGETATDFEIRAAETGPQNKSP*EATINF
Trigger: AAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACTCATAGGGGGCCCTTaGCCACACCTTCCAATCGCC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKLIGGP*PHLPIA
Trigger: GGCGATTGGAAGGTGTGGGCAAGGGCCCCCTATGAG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCACAGCCCTTACCTGGCTaGGGAGGTGTCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAQPLPG*GGVSSR
Trigger: TCTGCTGGAGACACCTCCCCAGCCAGGTAAGGGCTG...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAAGGCGAAGCTGGGGTTaGAGAAGGACGACGACATGG +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLARRSWG*RRTTTW
Trigger: CCATGTCGTCGTCCTTCTTCAACCCCAGCTTCGCCT...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR TCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACTCAGCCTCGAGGTCTaGGAAGTAGGCAGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKLSLEV*EVGRVS
Trigger: CGAGACTCTGCCTACTTCTCAGACCTCGAGGCTGAG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR TCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAGGTTTAAGTGTCCTGTaGGCACACCGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAGLSVL*AHRRSC
Trigger: GCAGCTCCTCCGGTGTGCTCACAGGACACTTAAACC...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTACGAGCAGGTTGCTATaGACCTCGTCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCATSRLL*TSSTSS
Trigger: AGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGT...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAAAATATTCCCTGTGCTaGCCTGCCCCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAKYSLC*PAPSST
Trigger: GGTGGAGCTGGGGGCAGGGCAGCACAGGGAATATTT...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTGCCTGGCTGCCCTGCTaGTTCTCCTGCCTAATAAAC +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAAWLPC*FSCLIN
Trigger: GTTTATTAGGCAGGAGAAGCAGCAGGGCAGCCAGGC...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAATGTGCCGACTCCGAGTaGTCCAGGGTTCTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKCADSE*SRVLGL
Trigger: GAGACCTAGAACCCTGGAGCACTCGGAGTCGGCACA...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACACCCTCTTCCGCTGTaGAGCCATTTGGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKHPLPL*SHLGSH
Trigger: ATGGCTCCCCAAATGGCTCCACAGCGGAAGAGGGTG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTCTTGCAGCGCCGATGTaGAAGTGGCCAGATTCTGAG +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCALAAPM*KWPDSE
Trigger: CTCAGAATCTGGCCACTTCCACATCGGCGCTGCAAG...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAACACATTCCCGCTCTTaGTCTGGTCCACGACGAGCA +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLATHSRS*SGPRRA
Trigger: TGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGT...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAACAGGCAGACAGGGCATaGGCAGACATCAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKQADRA*ADISDG
Trigger: TCCATCACTGATGTCTGCCCATGCCCTGTCTGCCTG...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTTGCTGGTGGTGTCATTaGGTAGTTCGTGGCAATCGC +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCACWWCH*VVRGNR
Trigger: GCGATTGCCACGAACTACCCAATGACACCACCAGCA...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR TCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAACTTGTACTCAAAATTaGGGCCTCGGCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLATCTQN*GLGWSR
Trigger: CCGAGACCAGCCGAGGCCTCAATTTTGAGTACAAGT...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTAGTCCTCTCTGTACTTaGAGTGAGCCAGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCASPLCT*SEPGHS
Trigger: ACTATGGCCTGGCTCACTGCAAGTACAGAGAGGACT...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR GCA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTGGAACAAGAAAACATTaGACCAGCGTTCTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAGTRKH*TSVLSL
Trigger: GAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCC...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
3UTR CAA 72 bp TTAGCAGATTTGTGCTCTTCCATACTGTTTGTTTGTTaGTTAGGTGAAATACAGTGTGGTGAGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LADLCSSILFVC*LGEIQCGELHW
Trigger: CCAGTGCAGCTCACCACACTGTATTTCACCTAACAAACAAACAAACAGTATGGAAGAGCACAAATCTGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR GCA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCACAAAACAAATCCCCCTaGGAAGCAACAATAAACTTT +
Preference number: 4 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAQNKSP*EATINF
Trigger: AAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTG...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR GCA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAAAAAGTTTTATTTATTaGACGAGTTGGGTATGGACC +
Preference number: 4 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKKSFIY*TSWVWT
Trigger: GGTCCATACCCAACTCGTGCAATAAATAAAACTTTT...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
37% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS CCA 90 bp GCGAGGCGGCGGTGCTGCCGTCAGAGTCGTCGTCCTGGTCCGCGGTaGCAGGTGGACTGGGGGCGCAGCCGGCGCAGTCAGGGTCGTGGC +
Preference number: 5 (lower is better)
Translates to: ARRRCCRQSRRPGPR*QVDWGRSRRSQGRG
Trigger: GCCACGACCCTGACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACGACGACTCTGACGGCAGCACCGCCGCCTCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GCGGGCGACACCGTGAAGCGCGAGAAGGGAGCGGGCGTGGGCGTGGGCGCAGCCCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: AGDTVKREKGAGVGVGAAPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...GGCTGCGCCCACGCCCACGCCCGCTCCCTTCTCGCGCTTCACGGTGTCGCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS CCA 90 bp GCGGTGGCAGGTGGACTGGGGGCGCAGCCGGCGCAGTCAGGGTCGTaGCCGGCGGCGGGTGCGGCCTCCTCTAGGCGGATGAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: AVAGGLGAQPAQSGS*PAAGAASSRRMKYS
Trigger: CGAGTACTTCATCCGCCTAGAGGAGGCCGCACCCGCCGCCGGCCACGACCCTGACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 90 bp TCCATGGCCAGCGAGGCGGCGGTGCTGCCGTCAGAGTCGTCGTCCTaGTCCGCGGTGGCAGGTGGACTGGGGGCGCAGCCGGCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SMASEAAVLPSESSS*SAVAGGLGAQPAQS
Trigger: TGACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACGACGACTCTGACGGCAGCACCGCCGCCTCGCTGGCCATGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 90 bp CCGTCGGGGGCGCACAGCTCCGTCAGCACGTCGTCGCCGTCCGCGTaGAAGCCGTCGCCCGCGAACTGCTCCAGCAGCGGGAAGGACGAG +
Preference number: 5 (lower is better)
Translates to: PSGAHSSVSTSSPSA*KPSPANCSSSGKDE
Trigger: CTCGTCCTTCCCGCTGCTGGAGCAGTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGACGTGCTGACGGAGCTGTGCGCCCCCGACGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CAA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS TCA 90 bp GGGGTCCCAGGACTCTGGACAGCGGCTGCCGCTGTTGTTGTTGGCTaGCACGTTGGAGCGCCAGTGCCCGCGCTGGGCGGCCCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: GVPGLWTAAAAVVVG*HVGAPVPALGGPPR
Trigger: GCGCGGAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS GCA 90 bp GTCAGCACGTCGTCGCCGTCCGCGTGGAAGCCGTCGCCCGCGAACTaGTCCAGCAGCGGGAAGGACGAGGCAGCGGCGAGCTCCACCACG +
Preference number: 5 (lower is better)
Translates to: VSTSSPSAWKPSPAN*SSSGKDEAAASSTT
Trigger: CGTGGTGGAGCTCGCCGCTGCCTCGTCCTTCCCGCTGCTGGAGCAGTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGACGTGCTGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
CDS GCA 90 bp GACCTCCGTGAGTGGCAGGACGTACACGTCGGGCCCGTTCTGTGCTaGCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTGCGTACTCGTC +
Preference number: 5 (lower is better)
Translates to: DLREWQDVHVGPVLC*RGRGALRQVGCVLV
Trigger: GACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGACGTGTACGTCCTGCCACTCACGGAGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS GCA 90 bp GGAGACCTCCGTGAGTGGCAGGACGTACACGTCGGGCCCGTTCTGTaGTGCCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTGCGTACTC +
Preference number: 5 (lower is better)
Translates to: GDLREWQDVHVGPVL*CRGRGALRQVGCVL
Trigger: GAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGACGTGTACGTCCTGCCACTCACGGAGGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS GCA 90 bp CCCGTTCTGTGCTGCCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGCATTCTCAAACTCCTGCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PVLCCRGRGALRQVG*VLVPLRILKLLLPG
Trigger: CCCGGGCAGCAGGAGTTTGAGAATGCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575363.1
CDS CCA 90 bp CCTCGGCTGGTCTCGGTCACCGTCAGCACGTCGTCGCCGTCCGCGTaGAAGCCGTCGCCCGCGAACTGCTCCAGCAGCGGGAAGGACGAG +
Preference number: 5 (lower is better)
Translates to: PRLVSVTVSTSSPSA*KPSPANCSSSGKDE
Trigger: CTCGTCCTTCCCGCTGCTGGAGCAGTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGACGTGCTGACGGTGACCGAGACCAGCCGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000417379.6
ENST00000573441.1
CDS-3UTR CAA 90 bp GACACGTGCGTGATGGAGAAGCGGGACGTGGGCGCGGGCGACACCGTGAAGCGCGTAGGGGGCGATTCCTaGGCGCCCGGGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: DTCVMEKRDVGAGDTVKRVGGDS*APGKGS
Trigger: GGAGCCCTTCCCGGGCGCCAAGGAATCGCCCCCTAC...GCGCTTCACGGTGTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GCGGGCGACACCGTGAAGCGCGAGAAGGGAGCGGGCGTGGGCGTGGGCGCAGCCGCTTCAGGTCCTCTCTaGGACTCGGCGTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: AGDTVKREKGAGVGVGAAASGPL*DSASES
Trigger: TGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAGC...GGCTGCGCCCACGCCCACGCCCGCTCCCTTCTCGCGCTTCACGGTGTCGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: EPFGEPSACCGRLGALGEPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CAA 90 bp CATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTAGGAGCCAGGGTCTCTaGAGAGCAGGGGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: HALQGPGVGSHGLRHPAARSQGL*RAGAAA
Trigger: AGCAGCGGCCCCTGCTCTCAAGAGACCCTGGCTCCT...AGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS TCA 90 bp CCCAGCGGTCCGACAGGGTCAGCTGCAGCTGGGGCTTGGGCAGCTTaGGCTGCTGCTCCCGGACCGTGTACGCCAGCACCTGCTGGTCCG +
Preference number: 5 (lower is better)
Translates to: PSGPTGSAAAGAWAA*AAAPGPCTPAPAGP
Trigger: CGGACCAGCAGGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573441.1
CDS GCA 90 bp CCCGTTCTGTGCTGCCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGCATTCTCAAACTCCTGCCACCGCCA +
Preference number: 5 (lower is better)
Translates to: PVLCCRGRGALRQVG*VLVPLRILKLLPPP
Trigger: TGGCGGTGGCAGGAGTTTGAGAATGCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS CCA 90 bp AGACGGGGTCCCAGGACTCTGGACAGCGGCTGCCGCTGTTGTTGTTaGCTGACACGTTGGAGCGCCAGTGCCCGCGCTGGGCGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RRGPRTLDSGCRCCC*LTRWSASARAGRPS
Trigger: GGAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCCGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 90 bp CTCTGCTTCGGTGGCGCCCAGCGGTCCGACAGGGTCAGCTGCAGCTaGGGCTTGGGCAGCTTGAGCTGCTGCTCCCGGACCGTGTACGCC +
Preference number: 5 (lower is better)
Translates to: LCFGGAQRSDRVSCS*GLGSLSCCSRTVYA
Trigger: GGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGGCGCCACCGAAGCAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573441.1
CDS-3UTR CAA 90 bp CACACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGGCACTGGAGCAGGTaGCTGTGCTTCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: HTGGAAGWGMRVLRGQAGRHWSR*LCFRAL
Trigger: CAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCCT...GCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp ACAGGCCATGCGCTGCAGGGTCCGGGGGTCGGGAGCCATGGACTCCGCCACCCGAGGCACTGGAGCAGGTaGCTGTGCTTCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: TGHALQGPGVGSHGLRHPRHWSR*LCFRAL
Trigger: CAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCCT...CGGGTGGCGGAGTCCATGGCTCCCGACCCCCGGACCCTGCAGCGCATGGCCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS-3UTR CAA 90 bp ACGTGCGTGATGGAGAAGCGGGACGTGGGCGCGGGCGACACCGTGAAGCGCGAGGGCCCCCACTCTCCTTaGGCAGCTGGGGCACAGGAC +
Preference number: 5 (lower is better)
Translates to: TCVMEKRDVGAGDTVKREGPHSP*AAGAQD
Trigger: GTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGCC...CTCGCGCTTCACGGTGTCGCCCGCGCCCACGTCCCGCTTCTCCATCACGCACGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GAGGCAGGCTCCTGGCTCCCTCCAGGCCCGCAAGTGAGGCAGGCTCCGCAGGCGGGGCACATAGTGGACTaGGGGGTCAGGCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: EAGSWLPPGPQVRQAPQAGHIVD*GVRQPC
Trigger: GCAAGGCTGCCTGACCCCCAAGTCCACTATGTGCCC...CGCCTGCGGAGCCTGCCTCACTTGCGGGCCTGGAGGGAGCCAGGAGCCTGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCTGCCCGTCCCCAGGGTaGTTCCCGGCTGCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: EIRAAETGPTRAPRATPCCPSPG*FPAARA
Trigger: AGCCCGGGCAGCCGGGAACAACCCTGGGGACGGGCA...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCGTGGGGGCCCCGCCTaGTGCCCACCTCTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSRGGPA*CPPLPG
Trigger: ACCTGGCAGAGGTGGGCACAAGGCGGGGCCCCCACG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGGGCAGCAGGAGTCCCTaGGCCAGTGGGCAGAACTCC +
Preference number: 5 (lower is better)
Translates to: GVGSHGLRHPAAPQVALEGSRSP*ASGQNS
Trigger: GGAGTTCTGCCCACTGGCCAAGGGACTCCTGCTGCC...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS TCA 90 bp ACCAGCGGTCCGACAGGGTCAGCTGCAGCTGGGGCTTGGGCAGCTTaGGCTGCTGCTCCCGGACCGTGTACGCCAGCACCTGCTGGTCCG +
Preference number: 5 (lower is better)
Translates to: TSGPTGSAAAGAWAA*AAAPGPCTPAPAGP
Trigger: CGGACCAGCAGGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS GCA 90 bp ACGTACACGTCGGGCCCGTTCTGTGCTGCCGTGGCCGGGGAGCCCTaGGCCAGGTCGGCTGCGTACTCGTCCCCCTCCGCATTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TYTSGPFCAAVAGEP*ARSAAYSSPSAFSN
Trigger: GTTTGAGAATGCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGACGTGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS GCA 90 bp CGGTCCGACAGGGTCAGCTGCAGCTGGGGCTTGGGCAGCTTGAGCTaGTGCTCCCGGACCGTGTACGCCAGCACCTGCTGGTCCGAGTGC +
Preference number: 5 (lower is better)
Translates to: RSDRVSCSWGLGSLS*CSRTVYASTCWSEC
Trigger: GCACTCGGACCAGCAGGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 90 bp CCCGCCGGGCCGCAGAGAGCGCCAGCGCCGTTCAAACTCCTCCTCTaGTTCGGTGGCGCCCTTGGCACACAGGTAGGACAGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PAGPQRAPAPFKLLL*FGGALGTQVGQQQV
Trigger: CACCTGCTGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAACGGCGCTGGCGCTCTCTGCGGCCCGGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS-3UTR CAA 90 bp AGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCCTCCGGCCCCGGGGCCAGAGCCTaGTGCCTCCCCGGAAACCCC +
Preference number: 5 (lower is better)
Translates to: SSSSDSSLSSLSSSSSSGPGARA*CLPGNP
Trigger: GGGGTTTCCGGGGAGGCACAAGGCTCTGGCCCCGGG...GCCGGAGGAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CAA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCCCGGGGCCAGAGCCTaGTGCCTCCCCGGAAACCCC +
Preference number: 5 (lower is better)
Translates to: RTPRGAEAPESAANSHQDPGARA*CLPGNP
Trigger: GGGGTTTCCGGGGAGGCACAAGGCTCTGGCCCCGGG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS TCA 90 bp GCACTGAGCGCCCAGGCTGCTTGGCCATGGGCAAGGAGACCTCCGTaGGTGGCAGGACGTACACGTCGGGCCCGTTCTGTGCTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: ALSAQAAWPWARRPP*VAGRTRRARSVLPW
Trigger: CCACGGCAGCACAGAACGGGCCCGACGTGTACGTCCTGCCACTCACGGAGGTCTCCTTGCCCATGGCCAAGCAGCCTGGGCGCTCAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS TCA 90 bp CCTCCTGGCCTGCAGGCCGTCGCTGGACGTGTCGGTGAAGATGCCTaGGGTGGCCTCGGCCGTGTCCTCATCCTCACTGCTGGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PPGLQAVAGRVGEDA*GGLGRVLILTAGCL
Trigger: GAGGCACCCAGCAGTGAGGATGAGGACACGGCCGAGGCCACCTCAGGCATCTTCACCGACACGTCCAGCGACGGCCTGCAGGCCAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS GCA 90 bp TCCGACAGGGTCAGCTGCAGCTGGGGCTTGGGCAGCTTGAGCTGCTaGTCCCGGACCGTGTACGCCAGCACCTGCTGGTCCGAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SDRVSCSWGLGSLSC*SRTVYASTCWSECW
Trigger: CCAGCACTCGGACCAGCAGGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 90 bp GACAGCAGCAGGTGCACCTCCTCGGCTGTGGGCCGCTGCTCGGGCTaGAGCCAGCAGAACTGCATCACCTCGTACCAGCGGTCCGACAGG +
Preference number: 5 (lower is better)
Translates to: DSSRCTSSAVGRCSG*SQQNCITSYQRSDR
Trigger: CCTGTCGGACCGCTGGTACGAGGTGATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGCACCTGCTGCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS GCA 90 bp GCGGGGTCCGGTAGTGCCCTCAGCCTCCGTGGCAAGCTTGGGCTCTaGCTGCGGGTGGTCACCCCCACTACTGGCTGTCTCTGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: AGSGSALSLRGKLGL*LRVVTPTTGCLCPG
Trigger: TCCTGGACAGAGACAGCCAGTAGTGGGGGTGACCACCCGCAGGCAGAGCCCAAGCTTGCCACGGAGGCTGAGGGCACTACCGGACCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS GCA 90 bp AAACTCCTGCTGCCCGGGGGCCAGCCGGGTCCTGCCGATACAGCGTaGAATCAGGTAGCACAGGGTCAGCATTGGGGGCCTGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: KLLLPGGQPGPADTA*NQVAQGQHWGPAQP
Trigger: GGGCTGGGCAGGCCCCCAATGCTGACCCTGTGCTACCTGATTGCACGCTGTATCGGCAGGACCCGGCTGGCCCCCGGGCAGCAGGAGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575363.1
CDS-3UTR CAA 90 bp GAGCCATTTGGGGAGCCATCAGCCTGCTGCGGCCGGTTGGGGGCGCTGGGAGAGAGCAGGCTGGGCATCTaGAGCAGGCTGCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: EPFGEPSACCGRLGALGESRLGI*SRLRRL
Trigger: CAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCT...CTCTCCCAGCGCCCCCAACCGGCCGCAGCAGGCTGATGGCTCCCCAAATGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CAA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCCCGGCTGCCTGGTCTaGCCCCACTTGAGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: LPLGRSMADLPSRASHPTPGCLV*PHLSLA
Trigger: GGCCAGACTCAAGTGGGGCAAGACCAGGCAGCCGGG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCCCCCTCACTGGGAGGTaGTGGCTGGCCTGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLPLTGR*WLACPA
Trigger: GGCGGGGCAGGCCAGCCACAACCTCCCAGTGAGGGG...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GGGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGCGGCTGCCCGGGCTCTaGTGGACCCAGCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: GWEEAHKPASVSGPCLVLRLPGL*WTQLCQ
Trigger: CTGGCACAGCTGGGTCCACAAGAGCCCGGGCAGCCG...CAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCTGCCCACCCCAGGGTTaGCTTCCGGCTGCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: EIRAAETGPTRAPRATPCCPPQG*LPAACA
Trigger: GGCACAGGCAGCCGGAAGCAAACCCTGGGGTGGGCA...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGGTCGGAGGGGCTGCCCGCTaGGCCTTTTCTGGGAAACTG +
Preference number: 5 (lower is better)
Translates to: VGSHGLRHPAAPQVALEVGGAAR*AFSGKL
Trigger: CAGTTTCCCAGAAAAGGCCAAGCGGGCAGCCCCTCC...GACCTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS TCA 90 bp GCCAGTGGCCGACGGGCTGAAGACCTCATAGCCACCATCACTGGCTaGGGACGGGATGTCCAGGGAGTCCAGGGAGTCGGGGGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ASGRRAEDLIATITG*GRDVQGVQGVGGPH
Trigger: GTGGGGACCCCCGACTCCCTGGACTCCCTGGACATCCCGTCCTCAGCCAGTGATGGTGGCTATGAGGTCTTCAGCCCGTCGGCCACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS GCA 90 bp CCCGTTCTGTGCTGCCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGCATTCTCAAACTCCTTGAACCCGAT +
Preference number: 5 (lower is better)
Translates to: PVLCCRGRGALRQVG*VLVPLRILKLLEPD
Trigger: ATCGGGTTCAAGGAGTTTGAGAATGCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS GCA 90 bp GGTAGGGCGTCACCTCGGCGCACTGGGCCAGGCACTGGAGCAGGTTaGTGTGCTTCAGGGCCCTGTAGGGCTGCACCTCCTCCAGGAACT +
Preference number: 5 (lower is better)
Translates to: GRASPRRTGPGTGAG*CASGPCRAAPPPGT
Trigger: AGTTCCTGGAGGAGGTGCAGCCCTACAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCCTGGCCCAGTGCGCCGAGGTGACGCCCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000572339.5
ENST00000576053.1
ENST00000650574.1
CDS-3UTR CAA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCTGGGGCTTGGGCAGCTaGAGCTGCTGCTCCCGGACC +
Preference number: 5 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTAWGLGS*SCCSRT
Trigger: GGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCA...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTTGTTGGCTGACACGTaGGAGCGCCAGTGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTLLADT*ERQCPR
Trigger: GCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGGGGGTCAGGCAGCCTaGCAGACAGCGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: RTPRGAEAPESAANSHQDGGQAA*QTAPGP
Trigger: AGGACCAGGCGCTGTCTGCAAGGCTGCCTGACCCCC...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp CAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCCCTGAGCCACTGGGGGCACCCTGCCTaGTCTAGGGCACATAGTGGA +
Preference number: 5 (lower is better)
Translates to: QRKQDRHGRPGPLLALSHWGHPA*SRAHSG
Trigger: TCCACTATGTGCCCTAGACAAGGCAGGGTGCCCCCA...GTGGCTCAGGGCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GGTGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGCAGGGACCACGTCCCTaGGAGGGCAGAGACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGKRLTNLPVSRGHASSWQGPRP*EGRDPG
Trigger: CCCAGGGTCTCTGCCCTCCAAGGGACGTGGTCCCTG...CCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCACTCGCAGCGCCAGCTaGGGCTCCTTCGGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: EIRAAETGPTRAPRATPCTRSAS*GSFGCV
Trigger: CACACACCCGAAGGAGCCCAAGCTGGCGCTGCGAGT...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GGGGTCGGGAGCCATGGACTCCGCCACCCGGCAGCTCCGCAGGTAGCCCTTGAGCCCACGTCTGTGGACTaGAGGAGCTGCACTGTAACC +
Preference number: 5 (lower is better)
Translates to: GVGSHGLRHPAAPQVALEPTSVD*RSCTVT
Trigger: GGTTACAGTGCAGCTCCTCAAGTCCACAGACGTGGG...CTCAAGGGCTACCTGCGGAGCTGCCGGGTGGCGGAGTCCATGGCTCCCGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576053.1
CDS TCA 90 bp TCATCCCACGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTaGATCTGCTGCCAACAGCCACCAGGACGTGGTCCCCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSHGLLQDTAWGRGT*ICCQQPPGRGPHLP
Trigger: GGGAAGGTGGGGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCGTGGGATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573469.1
CDS GCA 90 bp GCCAGGTCGGCTGCGTACTCGTCCCCCTCCGCATTCTCAAACTCCTaGCACCGCCATCTGCCCCAGCAGCCTTGGACCTTCACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ARSAAYSSPSAFSNS*HRHLPQQPWTFTWW
Trigger: CCACCAGGTGAAGGTCCAAGGCTGCTGGGGCAGATGGCGGTGGCAGGAGTTTGAGAATGCGGAGGGGGACGAGTACGCAGCCGACCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS CCA 90 bp CTGGTCCACGACGAGCAGGTTGCTATGCACCTCGTCCACCAGCTCTaGCGCGATCCAGCGCAGAGGCACCCACAGCTGGTCGGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: LVHDEQVAMHLVHQL*RDPAQRHPQLVGSH
Trigger: GTGACTGCCGACCAGCTGTGGGTGCCTCTGCGCTGGATCGCGCCAGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS CCA 90 bp AACTGCATCACCTCGTACCAGCGGTCCGACAGGGTCAGCTGCAGCTaGGGCTTGGGCAGCTTGAGCTGCTGCTCCCGGACCGTGTACGCC +
Preference number: 5 (lower is better)
Translates to: NCITSYQRSDRVSCS*GLGSLSCCSRTVYA
Trigger: GGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGTACGAGGTGATGCAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS CCA 90 bp CCTTGGCACACAGGTAGGACAGCAGCAGGTGCACCTCCTCGGCTGTaGGCCGCTGCTCGGGCTGCAGCCAGCAGAACTGCATCACCTCGT +
Preference number: 5 (lower is better)
Translates to: PWHTGRTAAGAPPRL*AAARAAASRTASPR
Trigger: ACGAGGTGATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGCACCTGCTGCTGTCCTACCTGTGTGCCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS CCA 90 bp AGCGCCAGCGCCGTTCAAACTCCTCCTCTGCTTCGGTGGCGCCCTTaGCACACAGGTAGGACAGCAGCAGGTGCACCTCCTCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SASAVQTPPLLRWRP*HTGRTAAGAPPRLW
Trigger: CCACAGCCGAGGAGGTGCACCTGCTGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAACGGCGCTGGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS CCA 90 bp GCCGCAGAGAGCGCCAGCGCCGTTCAAACTCCTCCTCTGCTTCGGTaGCGCCCTTGGCACACAGGTAGGACAGCAGCAGGTGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: AAESASAVQTPPLLR*RPWHTGRTAAGAPP
Trigger: AGGAGGTGCACCTGCTGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAACGGCGCTGGCGCTCTCTGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS-3UTR CAA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCTTGTTGGCTGACACGTaGGAGCGCCAGTGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTALLADT*ERQCPR
Trigger: GCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAA...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp TCCTCTCTTGGACTCGGCGTCCGAGTCAGACACGTGCGTGATGGAGAAGCGGGACACCTTGGCTGGGCCTaGGGGCTCCGGAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SSLGLGVRVRHVRDGEAGHLGWA*GLRRLW
Trigger: CCAGAGCCTCCGGAGCCCCAAGGCCCAGCCAAGGTG...TCCCGCTTCTCCATCACGCACGTGTCTGACTCGGACGCCGAGTCCAAGAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CAA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGCACCTTGGCTGGGCCTaGGGGCTCCGGAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEHLGWA*GLRRLW
Trigger: CCAGAGCCTCCGGAGCCCCAAGGCCCAGCCAAGGTG...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAAGCAGGCTGGGCATCTaGAGCAGGCTGCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTSRLGI*SRLRRL
Trigger: CAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCT...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCATGGCGAAGGCTGCCTaGGCCGTCATCAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: EIRAAETGPTRAPRATPCMAKAA*AVISGK
Trigger: CTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCAT...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGCCATTTCCTCACGGGTaGAGTGGGCCACTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTPFPHG*SGPLPW
Trigger: CCAGGGGAGTGGCCCACTCAACCCGTGAGGAAATGG...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCATCCCCTCCCGGAAGCTaGTGGGCTCTGGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPSPPGS*WALAGC
Trigger: ACAGCCAGCCAGAGCCCACAAGCTTCCGGGAGGGGA...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS GCA 90 bp TGTACGCCAGCACCTGCTGGTCCGAGTGCTGGGGATAGGGCTGCGTaGCCAGCTCAAAGAGCTCCCAGATGGTCACGCCCAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: CTPAPAGPSAGDRAA*PAQRAPRWSRPGTT
Trigger: TGTGGTCCCTGGGCGTGACCATCTGGGAGCTCTTTGAGCTGGGCACGCAGCCCTATCCCCAGCACTCGGACCAGCAGGTGCTGGCGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS CCA 90 bp GGATTCTTCTCGTTGAGGCCACTGCTTCTGCAGAGAGCGGAAGGCTaGCACCACATCCGGCCTCCTGGCCTGCAGGCCGTCGCTGGACGT +
Preference number: 5 (lower is better)
Translates to: GFFSLRPLLLQRAEG*HHIRPPGLQAVAGR
Trigger: ACGTCCAGCGACGGCCTGCAGGCCAGGAGGCCGGATGTGGTGCCAGCCTTCCGCTCTCTGCAGAAGCAGTGGCCTCAACGAGAAGAATCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGTGGGGCTTGGGCAGCTaGAGCTGCTGCTCCCGGACC +
Preference number: 5 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEWGLGS*SCCSRT
Trigger: GGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCA...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACACGGCTGCCGCTGTTGTaGTTGGCTGACACGTTGGAG +
Preference number: 5 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTRLPLL*LADTLE
Trigger: CTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCG...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp CTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACGCAGCGGCTGCCGCTGTaGTTGTTGGCTGACACGTTG +
Preference number: 5 (lower is better)
Translates to: LPLGRSMADLPSRASHPTQRLPL*LLADTL
Trigger: CAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTG...CGTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACCCGGGGCCAGAGCCTaGTGCCTCCCCGGAAACCCC +
Preference number: 5 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPPGARA*CLPGNP
Trigger: GGGGTTTCCGGGGAGGCACAAGGCTCTGGCCCCGGG...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCACCTTGGCTGGGCCTaGGGGCTCCGGAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GLAASLKAQTNSASGAEHHLGWA*GLRRLW
Trigger: CCAGAGCCTCCGGAGCCCCAAGGCCCAGCCAAGGTG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGTAGGGGGCGATTCCTaGGCGCCCGGGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ETATDFEIRAAETGPTRAVGGDS*APGKGS
Trigger: GGAGCCCTTCCCGGGCGCCAAGGAATCGCCCCCTAC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCCGCTGTGGAGCCATTaGGGGAGCCATCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: RTPRGAEAPESAANSHQDPLWSH*GSHQPA
Trigger: AGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCGG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCATGGCGAAGGCTGCCTaGGCCGTCATCAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGMAKAA*AVISGK
Trigger: CTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCAT...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCGGTGACGCCAGCCTaGAGGGGCAGGAGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: ETATDFEIRAAETGPTRAPVTPA*RGRSCP
Trigger: TGGGCAGCTCCTGCCCCTCAAGGCTGGCGTCACCGG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGGCCCCCACTCTCCTTaGGCAGCTGGGGCACAGGAC +
Preference number: 5 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEGPHSP*AAGAQD
Trigger: GTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGCC...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACCCTCATAGGGGGCCCTaGCCCACACCTTCCAATCGC +
Preference number: 5 (lower is better)
Translates to: RTPRGAEAPESAANSHQDPHRGP*PTPSNR
Trigger: GCGATTGGAAGGTGTGGGCAAGGGCCCCCTATGAGG...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp CACCGGAGGAGCTGCCGGATGGGGCATGCGGGTCCTCCGAGGCCAGGCAGGCAGTACTGGGTCCCCTCCTaGGGTTCATGGTATCTTTCT +
Preference number: 5 (lower is better)
Translates to: HRRSCRMGHAGPPRPGRQYWVPS*GSWYLS
Trigger: AGAAAGATACCATGAACCCAAGGAGGGGACCCAGTA...CTGCCTGCCTGGCCTCGGAGGACCCGCATGCCCCATCCGGCAGCTCCTCCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS GCA 90 bp CACACATTCCCGCTCTTGGTCTGGTCCACGACGAGCAGGTTGCTATaGACCTCGTCCACCAGCTCTGGCGCGATCCAGCGCAGAGGCACC +
Preference number: 5 (lower is better)
Translates to: HTFPLLVWSTTSRLL*TSSTSSGAIQRRGT
Trigger: GGTGCCTCTGCGCTGGATCGCGCCAGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 90 bp GGGACCACACATTCCCGCTCTTGGTCTGGTCCACGACGAGCAGGTTaGTATGCACCTCGTCCACCAGCTCTGGCGCGATCCAGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GTTHSRSWSGPRRAG*YAPRPPALARSSAE
Trigger: CTCTGCGCTGGATCGCGCCAGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 90 bp AGGTACAGGAGGCTGTGCCGGCCCACGTCTGTGGACTTGAGGAGCTaGACTGTAACCAAGCAGGGGGTTCAGGGACCCAGTGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RYRRLCRPTSVDLRS*TVTKQGVQGPSVAS
Trigger: GGAGGCCACACTGGGTCCCTGAACCCCCTGCTTGGTTACAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000573469.1
ENST00000576053.1
ENST00000650574.1
CDS-3UTR CAA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCTCCACGACGAGCAGGTaGCTATGCACCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTASTTSR*LCTSST
Trigger: GGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGA...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp CTCTTCGCTGTCCTCGCTAGGCTCCTGGACGCTGTAGCAGCGGAGCTCCTCGTCCTGCCGCTGTTGTTGTaGGCTGACACGTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: LFAVLARLLDAVAAELLVLPLLL*ADTLER
Trigger: GCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAG...GACGAGGAGCTCCGCTGCTACAGCGTCCAGGAGCCTAGCGAGGACAGCGAAGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CAA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCACTGCCGCTGTTGTTGTaGGCTGACACGTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPLPLLL*ADTLER
Trigger: GCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAG...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCGGCTGCCGCTGTTGTaGTTGGCTGACACGTTGGAG +
Preference number: 5 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGRLPLL*LADTLE
Trigger: CTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp AGCTCCTCGTCAGACTCGTCGCTGTCCTCACTGTCCTCCTCCTCCTCCTCCGGCCAGCGGCTGCCGCTGTaGTTGTTGGCTGACACGTTG +
Preference number: 5 (lower is better)
Translates to: SSSSDSSLSSLSSSSSSGQRLPL*LLADTL
Trigger: CAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTG...GCCGGAGGAGGAGGAGGAGGACAGTGAGGACAGCGACGAGTCTGACGAGGAGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CAA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGACACGGCCTTCTTCTaGCGTTCCAGGTCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTDTAFF*RSRSSQ
Trigger: CTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTC...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTAGGGGGCGATTCCTaGGCGCCCGGGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSVGGDS*APGKGS
Trigger: GGAGCCCTTCCCGGGCGCCAAGGAATCGCCCCCTAC...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTATGGCGAAGGCTGCCTaGGCCGTCATCAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTMAKAA*AVISGK
Trigger: CTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCAT...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GCCTGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTGGGCACTGGCCCCTTTaGAGTGTGTATGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: ACTVLPRAPLERGPRGRSGHWPL*SVYVCT
Trigger: TGTACACACATACACACTCAAAAGGGGCCAGTGCCC...ACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACCTCCCATCCAGAACCTaGCTGCCAGGGCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDLPSRT*LPGPPS
Trigger: GCTGGGAGGCCCTGGCAGCAAGGTTCTGGATGGGAG...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp CACCCAGTGTGGATGGTTCAGCACGCTCCACCTGGTCCCACTGTTCTGGGAGACCTGAGGGGCCGCCTCTaGAGGGTACACGCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: HPVWMVQHAPPGPTVLGDLRGRL*RVHASG
Trigger: ACCAGAGGCGTGTACCCTCAAGAGGCGGCCCCTCAG...GTCTCCCAGAACAGTGGGACCAGGTGGAGCGTGCTGAACCATCCACACTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCTGGTCTTGCCCCACTaGAGTCTGGCCTGGACTGGA +
Preference number: 5 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHLVLPH*SLAWTG
Trigger: TCCAGTCCAGGCCAGACTCAAGTGGGGCAAGACCAG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTCCTTGCAGTCCAAGCACAGCTTaGCCAGAGCACAGTCCCGTC +
Preference number: 5 (lower is better)
Translates to: EIRAAETGPTRAPRATPCSPSTA*PEHSPV
Trigger: GACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACT...GCAAGGAGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTTTGGGGCTGACAGCCTaGTGGGGACTGGAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: DFEIRAAETGPTRAPRATLGLTA*WGLEVR
Trigger: CCTGACCTCCAGTCCCCACAAGGCTGTCAGCCCCAA...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp ATCTGCAGCCCTGCGGGAGCCGTGAGCCTAACCTGCCTTCTCTGGATGCCCCCACTAGATAACCTGGGCTaGCACACGGTGCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: ICSPAGAVSLTCLLWMPPLDNLG*HTVLAP
Trigger: TGGGGCCAGCACCGTGTGCAAGCCCAGGTTATCTAG...TGGGGGCATCCAGAGAAGGCAGGTTAGGCTCACGGCTCCCGCAGGGCTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp CGGGCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACACGGCCCGCCTCCCACTaGTACTCAAAATTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: RASPGHRVGQRHLNLLPTRPASH*YSKLRP
Trigger: AGGCCTCAATTTTGAGTACAAGTGGGAGGCGGGCCG...TGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR CAA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGCGGCCCGCCTCCCACTaGTACTCAAAATTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: TPRGAEAPESAANSHQDVRPASH*YSKLRP
Trigger: AGGCCTCAATTTTGAGTACAAGTGGGAGGCGGGCCG...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR CAA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCCAGCGGCTGCCGCTGTaGTTGTTGGCTGACACGTTG +
Preference number: 5 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLQRLPL*LLADTL
Trigger: CAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTG...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCGACACGGCCTTCTTCTaGCGTTCCAGGTCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: DEFCLWGGAWPIYHPGPLDTAFF*RSRSSQ
Trigger: CTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTC...GAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGTAGGGGGCGATTCCTaGGCGCCCGGGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRVGGDS*APGKGS
Trigger: GGAGCCCTTCCCGGGCGCCAAGGAATCGCCCCCTAC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTATGGCGAAGGCTGCCTaGGCCGTCATCAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVMAKAA*AVISGK
Trigger: CTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCAT...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp TCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTCTCATCCCACCCCGTCAGGCTGAGATaGGACACAGCATTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SASGAEHGRSTIQGLSSHPVRLR*DTAFAA
Trigger: GGCTGCAAATGCTGTGTCCAATCTCAGCCTGACGGG...GTGGGATGAGAGGCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp ACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGCAGGGTCCTCCGCTCTaGGACACGTCTGGTGACTTT +
Preference number: 5 (lower is better)
Translates to: TPRGAEAPESAANSHQDVQGPPL*DTSGDF
Trigger: AAAGTCACCAGACGTGTCCAAGAGCGGAGGACCCTG...CACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GGGCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATCCCACGTCTGTGGACTaGAGGAGCTGCACTGAGCGC +
Preference number: 5 (lower is better)
Translates to: GLAASLKAQTNSASGAEHPTSVD*RSCTER
Trigger: GCGCTCAGTGCAGCTCCTCAAGTCCACAGACGTGGG...ATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGAGGCACTGGAGCAGGTaGCTGTGCTTCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: ETATDFEIRAAETGPTRARHWSR*LCFRAL
Trigger: CAGGGCCCTGAAGCACAGCAACCTGCTCCAGTGCCT...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp CGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTGGTCCCACTTGTACTCAAAATaGAGGCCTCGGCTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RVGQRHLNLLPTATRTWSHLYSK*RPRLVS
Trigger: CGAGACCAGCCGAGGCCTCAATTTTGAGTACAAGTG...GGACCACGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR CAA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGCCTTCCTGCGCCTCCTaGAGCACAAACTCAGGGGAC +
Preference number: 5 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEPSCAS*STNSGD
Trigger: GTCCCCTGAGTTTGTGCTCAAGGAGGCGCAGGAAGG...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR CAA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGAAGCAGGCTGGGCATCTaGAGCAGGCTGCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGSRLGI*SRLRRL
Trigger: CAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCT...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACAAGCAGGCTGGGCATCTaGAGCAGGCTGCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTSRLGI*SRLRRL
Trigger: CAACCTGCGCAGCCTGCTCAAGATGCCCAGCCTGCT...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp TACAGTGTGGTGAGCTGCACTGGTGACAACAGCCCTTACCTGGCTGGGGAGGTGCCGCTGTGGAGCCATTaGGGGAGCCATCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: YSVVSCTGDNSPYLAGEVPLWSH*GSHQPA
Trigger: AGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCGG...CACCTCCCCAGCCAGGTAAGGGCTGTTGTCACCAGTGCAGCTCACCACACTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGAGGCTTCAGGTCCTCTCTaGGACTCGGCGTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: SRGHASSWFKCPVSTPEEASGPL*DSASES
Trigger: TGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAGC...CTCCTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAGGGCACTGGCCCCTTTaGAGTGTGTATGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTGHWPL*SVYVCT
Trigger: TGTACACACATACACACTCAAAAGGGGCCAGTGCCC...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp CTAGGGCCATGGCGAAGGCTGCCTTGGCCGTCATCAGCGGGAAGTCGTCGTCCCGGGCACTGGCCCCTTTaGAGTGTGTATGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: LGPWRRLPWPSSAGSRRPGHWPL*SVYVCT
Trigger: TGTACACACATACACACTCAAAAGGGGCCAGTGCCC...GGGACGACGACTTCCCGCTGATGACGGCCAAGGCAGCCTTCGCCATGGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS-3UTR CAA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGGGCCCCCACTCTCCTTaGGCAGCTGGGGCACAGGAC +
Preference number: 5 (lower is better)
Translates to: SEGETATDFEIRAAETGPGPHSP*AAGAQD
Trigger: GTCCTGTGCCCCAGCTGCCAAAGGAGAGTGGGGGCC...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACAGCAAAGCAGCGTATATaGTCTGTGAGCTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTAKQRI*SVSSVP
Trigger: GGGCACAGAGCTCACAGACAATATACGCTGCTTTGC...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACTCTGGTGACTTTCCTTaGCTGGCTGGAGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RTPRGAEAPESAANSHQDSGDFP*LAGEVL
Trigger: CAGCACCTCTCCAGCCAGCAAAGGAAAGTCACCAGA...GTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTCCTTCACAAAGGACGTaGGTCCCTGTGTCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTPSQRT*VPVSPW
Trigger: CCAGGGAGACACAGGGACCAACGTCCTTTGTGAAGG...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCTTCCATCCCCAAGTaGCTAGGAGGGCGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ETATDFEIRAAETGPTRAPSIPK*LGGRLC
Trigger: GCAGAGCCGCCCTCCTAGCAACTTGGGGATGGAAGG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS CCA 90 bp TCCCAGAAAAGCCACGGAGCTGCAGGATCCATCCGGGCATCTTTCTaGGTAGGTCTGGAGAAGGTGCCTGAAGCCACTGGGATAGCCCGG +
Preference number: 5 (lower is better)
Translates to: SQKSHGAAGSIRASF*VGLEKVPEATGIAR
Trigger: CCGGGCTATCCCAGTGGCTTCAGGCACCTTCTCCAGACCTACCCAGAAAGATGCCCGGATGGATCCTGCAGCTCCGTGGCTTTTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572339.5
ENST00000573469.1
ENST00000576053.1
CDS-3UTR CAA 90 bp GACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCCAGGGCCACTAAGGCGAAGCTGGGGTaGAAGAAGGACGACGACATG +
Preference number: 5 (lower is better)
Translates to: DFEIRAAETGPTRAPRATKAKLG*KKDDDM
Trigger: CATGTCGTCGTCCTTCTTCAACCCCAGCTTCGCCTT...AGTGGCCCTGGGCGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR CAA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCACACATTCCCGCTCTaGGTCTGGTCCACGACGAGC +
Preference number: 5 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWHTFPL*VWSTTS
Trigger: GCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp CTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACACACATTCCCGCTCTaGGTCTGGTCCACGACGAGC +
Preference number: 5 (lower is better)
Translates to: LPVSRGHASSWFKCPVSTHTFPL*VWSTTS
Trigger: GCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTG...TGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGCCTTCCTGCGCCTCCTaGAGCACAAACTCAGGGGAC +
Preference number: 5 (lower is better)
Translates to: ETATDFEIRAAETGPTRAPSCAS*STNSGD
Trigger: GTCCCCTGAGTTTGTGCTCAAGGAGGCGCAGGAAGG...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS-3UTR CAA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGGACACGGCCTTCTTCTaGCGTTCCAGGTCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMDTAFF*RSRSSQ
Trigger: CTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTC...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGCTTCAGGTCCTCTCTaGGACTCGGCGTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWASGPL*DSASES
Trigger: TGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAGC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGCATGGCCATGGAGCCTaGGGTACCCCTGAGTTAAGG +
Preference number: 5 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMHGHGA*GTPELR
Trigger: CCTTAACTCAGGGGTACCCAAGGCTCCATGGCCATG...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TCCTGCCCTGCTGGGCGCTTCAATTATAGTCAAAGGGTGACCCCGGCAAGCAGCCTGCCCAGGCTGGTCTaGAACTCCAGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: SCPAGRFNYSQRVTPASSLPRLV*NSRAQV
Trigger: CACTTGAGCCCTGGAGTTCAAGACCAGCCTGGGCAG...GCTGCTTGCCGGGGTCACCCTTTGACTATAATTGAAGCGCCCAGCAGGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCATGGAGATGCTCTGGGTaGGCCCTGGCCACCACCTTG +
Preference number: 5 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPWRCSG*ALATTL
Trigger: CAAGGTGGTGGCCAGGGCCAACCCAGAGCATCTCCA...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTTCCACGACGAGCAGGTaGCTATGCACCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSSTTSR*LCTSST
Trigger: GGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGA...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GACCCCATGCTGCCTCCAACTGAGCCTTGTGTTTCCTTGCAGCGCCGATGTGGAAGGGACAGACAGACATaGCCCTCAGAAGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: DPMLPPTEPCVSLQRRCGRDRQT*PSEGQG
Trigger: TCCCTGCCCTTCTGAGGGCAATGTCTGTCTGTCCCT...TCCACATCGGCGCTGCAAGGAAACACAAGGCTCAGTTGGAGGCAGCATGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TGTGGGAAGGGTGGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCATCTGTGCTGTCACCCTaGGAGCTGCCTGACATCCCC +
Preference number: 5 (lower is better)
Translates to: CGKGGLTGLAESVKGKQPSVLSP*ELPDIP
Trigger: GGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGA...TGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCCACCCTTCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTGACCTTGCAGTGGCCTaGGGCTGCAGACTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVDLAVA*GCRLCH
Trigger: ATGACAAAGTCTGCAGCCCAAGGCCACTGCAAGGTC...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GTGCCATCTGTGCTGTCACCCTTGGAGCTGCCTGACATCCCCCATCCTGTCCTGGTGCTGGTGGTGTCATaGGGTAGTTCGTGGCAATCG +
Preference number: 5 (lower is better)
Translates to: VPSVLSPLELPDIPHPVLVLVVS*GSSWQS
Trigger: CGATTGCCACGAACTACCCAATGACACCACCAGCAC...CAGGACAGGATGGGGGATGTCAGGCAGCTCCAAGGGTGACAGCACAGATGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTGTCCTGTGAGCACACCGGAGGGTGTCGAAAGCCACTaGCAGTTGGCCAAGAGACTC +
Preference number: 5 (lower is better)
Translates to: VSRGHASSWFKCPVSTPEGVESH*QLAKRL
Trigger: GAGTCTCTTGGCCAACTGCAAGTGGCTTTCGACACC...CTCCGGTGTGCTCACAGGACACTTAAACCAGGACGAGGCATGGCCCCGAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGGCTCCGCAGGCGCCGTCCAGGGAGAGCCAGAGCCCCAGCTGTGTGCCGACTCACTGCCTTTCTGTTGTaGATTTTCGGCAACAAATTC +
Preference number: 5 (lower is better)
Translates to: RLRRRRPGRARAPAVCRLTAFLL*IFGNKF
Trigger: GAATTTGTTGCCGAAAATCAACAACAGAAAGGCAGT...GAGTCGGCACACAGCTGGGGCTCTGGCTCTCCCTGGACGGCGCCTGCGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGGAGCCTTGTGTTTCCTaGCAGCGCCGATGTGGAAGT +
Preference number: 5 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMEPCVS*QRRCGS
Trigger: ACTTCCACATCGGCGCTGCAAGGAAACACAAGGCTC...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCACCAGGACGTATTTATTGCACGAGTaGGGTATGGACCTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: GHRVGQRHLNLLPTATRTYLLHE*GMDLLP
Trigger: CGGAAGGAGGTCCATACCCAACTCGTGCAATAAATA...CGTCCTGGTGGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GAGCTGCCCAGGTCTCAAGCCTCTTTACTCTCACCCCCGGCACCAGCTTCAGGTGCATTCTCAAACTCCTaGAACCCGATACCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ELPRSQASLLSPPAPASGAFSNS*NPIPPF
Trigger: GAAGGGCGGTATCGGGTTCAAGGAGTTTGAGAATGC...ACCTGAAGCTGGTGCCGGGGGTGAGAGTAAAGAGGCTTGAGACCTGGGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS-3UTR CAA 90 bp GCCACAGAGCACTTCCTTAGGAGTGGGTCTAGCCTGGCAGGCAGACAGGGCATGCACTTGTACTCAAAATaGAGGCCTCGGCTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: ATEHFLRSGSSLAGRQGMHLYSK*RPRLVS
Trigger: CGAGACCAGCCGAGGCCTCAATTTTGAGTACAAGTG...CATGCCCTGTCTGCCTGCCAGGCTAGACCCACTCCTAAGGAAGTGCTCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGCTGCCGCTGTTGTTGTaGGCTGACACGTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SEGETATDFEIRAAETGPLPLLL*ADTLER
Trigger: GCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAG...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGACGGCTGCCGCTGTTGTaGTTGGCTGACACGTTGGAG +
Preference number: 5 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRRLPLL*LADTLE
Trigger: CTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCG...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GGGCTTACGGGTCTAGCTGAGTCAGTGAAGGGGAAACAGCCACGGACTTTGAGAGACACGGCCTTCTTCTaGCGTTCCAGGTCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: GLTGLAESVKGKQPRTLRDTAFF*RSRSSQ
Trigger: CTGCGAGGACCTGGAACGCAAGAAGAAGGCCGTGTC...TCTCAAAGTCCGTGGCTGTTTCCCCTTCACTGACTCAGCTAGACCCGTAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCCGATCTACCATCCAGGGCCTTTGTCATATTCTATaGGCTCAGTTAGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: AQTNSASGAEHGRSTIQGLCHIL*AQLGPH
Trigger: GTGGGGGCCTAACTGAGCCAATAGAATATGACAAAG...GCCCTGGATGGTAGATCGGCCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGCTGTTAGTCTGACCTaGCCTCTTCTGTCCCCCAAG +
Preference number: 5 (lower is better)
Translates to: ETATDFEIRAAETGPTRAAVSLT*PLLSPK
Trigger: CTTGGGGGACAGAAGAGGCAAGGTCAGACTAACAGC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTTAAGTAAGGCGAAGCTGGGGTaGAAGAAGGACGACGACATG +
Preference number: 5 (lower is better)
Translates to: RGSQTCQCLGAMPRPGLSKAKLG*KKDDDM
Trigger: CATGTCGTCGTCCTTCTTCAACCCCAGCTTCGCCTT...ACTTAAACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR CAA 90 bp GAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGACACGGGCGGCATTCTCAAACTCCTaGAACCCGATACCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ETATDFEIRAAETGPTRAAFSNS*NPIPPF
Trigger: GAAGGGCGGTATCGGGTTCAAGGAGTTTGAGAATGC...CGCCCGTGTCGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS-3UTR CAA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGGGGCACTGGCCCCTTTaGAGTGTGTATGTGTGTACA +
Preference number: 5 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWGHWPL*SVYVCT
Trigger: TGTACACACATACACACTCAAAAGGGGCCAGTGCCC...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GCTTCTCCAGGACACCGCGTGGGGCAGAGGCACCTGAATCTGCTGCCAACAGCCAGGAACAAGAAAACATaGCACCAGCGTTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: ASPGHRVGQRHLNLLPTARNKKT*HQRSKP
Trigger: AGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCT...GGCTGTTGGCAGCAGATTCAGGTGCCTCTGCCCCACGCGGTGTCCTGGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GAGTCCAAGCACAGCTTTGCCAGAGCACAGTCCCGTCCCTGCTGCGTCTTCATGTGTCTTGAGTCGTATTaGTGCATCAGCTGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: ESKHSFARAQSRPCCVFMCLESY*CISCGP
Trigger: GGGGCCACAGCTGATGCACAAATACGACTCAAGACA...CATGAAGACGCAGCAGGGACGGGACTGTGCTCTGGCAAAGCTGTGCTTGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TGCACGGTCCTGCCAAGGGCACCTCTAGAACGGGGCCCACGGGGCAGGAGTACATTCACTGCCTTTCTGTaGTTGATTTTCGGCAACAAA +
Preference number: 5 (lower is better)
Translates to: CTVLPRAPLERGPRGRSTFTAFL*LIFGNK
Trigger: TTTGTTGCCGAAAATCAACAACAGAAAGGCAGTGAA...TGTACTCCTGCCCCGTGGGCCCCGTTCTAGAGGTGCCCTTGGCAGGACCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGGTGCCTGGTGTATATTaGGGATGTGCCAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SEGETATDFEIRAAETGPVPGVY*GCARVS
Trigger: GGACACCCTGGCACATCCCAAATATACACCAGGCAC...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGACTAGAGTTAGTAAGTaGCCTGGCGTTCTCGTGCAG +
Preference number: 5 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWTRVSK*PGVLVQ
Trigger: CTGCACGAGAACGCCAGGCAACTTACTAACTCTAGT...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TGGGAAGAGGCTCACAAACCTGCCAGTGTCTCGGGGCCATGCCTCGTCCTGGTTAGGAACAAGAAAACATaGCACCAGCGTTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: WEEAHKPASVSGPCLVLVRNKKT*HQRSKP
Trigger: AGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCT...AACCAGGACGAGGCATGGCCCCGAGACACTGGCAGGTTTGTGAGCCTCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGCTTGGGCTGCAGACTTaGTCATATTCTATTGGCTCA +
Preference number: 5 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWLGLQT*SYSIGS
Trigger: TGAGCCAATAGAATATGACAAAGTCTGCAGCCCAAG...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGTTCACATTCAAGTCATaGGTGAAGCTGCCGCTTGGC +
Preference number: 5 (lower is better)
Translates to: SEGETATDFEIRAAETGPFTFKS*VKLPLG
Trigger: GCCAAGCGGCAGCTTCACCAATGACTTGAATGTGAA...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCATCCCGGCGTGCGTCTTaGCCGTGGGGGCCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: NTKQIPLRSNNKLYISLASRRAS*PWGPRL
Trigger: AAGGCGGGGCCCCCACGGCAAAGACGCACGCCGGGA...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp TTCCATTCGCTCCAACCACAGCAGTTAGTTAGTTACAAAAATATTCCCTGTGCTTGGGGCTTGGGCAGCTaGAGCTGCTGCTCCCGGACC +
Preference number: 5 (lower is better)
Translates to: FHSLQPQQLVSYKNIPCAWGLGS*SCCSRT
Trigger: GGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCA...AGCACAGGGAATATTTTTGTAACTAACTAACTGCTGTGGTTGGAGCGAATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GTGCGTTCCTGTGTAGAGAACATCCAGGCCCCGGCTGCCTGGTCTTGCCCCACTTTTCAACTTCTTGTCTaGAGTCGTATTTGTGCATCA +
Preference number: 5 (lower is better)
Translates to: VRSCVENIQAPAAWSCPTFQLLV*SRICAS
Trigger: TGATGCACAAATACGACTCAAGACAAGAAGTTGAAA...AGTGGGGCAAGACCAGGCAGCCGGGGCCTGGATGTTCTCTACACAGGAACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AGTGAAGGGGAAACAGCCACGGACTTTGAGATAAGGGCAGCGGAAACAGGACCGAGGAACAAGAAAACATaGCACCAGCGTTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: SEGETATDFEIRAAETGPRNKKT*HQRSKP
Trigger: AGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCT...CGGTCCTGTTTCCGCTGCCCTTATCTCAAAGTCCGTGGCTGTTTCCCCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAATTGTTGGCTGACACGTaGGAGCGCCAGTGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKLLADT*ERQCPR
Trigger: GCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAA...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp GCTAGCAGCAAGCCTAAAAGCCCAGACGAATTCTGCCTCTGGGGCGGAGCATGGACTTCATTAGCAGATTaGTGCTCTTCCATACTGTTT +
Preference number: 5 (lower is better)
Translates to: ASSKPKSPDEFCLWGGAWTSLAD*CSSILF
Trigger: AAACAGTATGGAAGAGCACAAATCTGCTAATGAAGT...CCATGCTCCGCCCCAGAGGCAGAATTCGTCTGGGCTTTTAGGCTTGCTGCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCACCGCTGTGGAGCCATTaGGGGAGCCATCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAPLWSH*GSHQPA
Trigger: AGCAGGCTGATGGCTCCCCAAATGGCTCCACAGCGG...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCACACACATTCCCGCTCTaGGTCTGGTCCACGACGAGC +
Preference number: 5 (lower is better)
Translates to: NTKQIPLRSNNKLYISLAHTFPL*VWSTTS
Trigger: GCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTG...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS-3UTR CAA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGCTTCAGGTCCTCTCTaGGACTCGGCGTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKASGPL*DSASES
Trigger: TGACTCGGACGCCGAGTCCAAGAGAGGACCTGAAGC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS-3UTR CAA 90 bp CAAGGAACAAGAAAACATTGCACCAGCGTTCTAAGCCTCAAACAAAACACAAAAGACTCCCCAATCCCATaGCCACCCTGTCATGCCCCA +
Preference number: 5 (lower is better)
Translates to: QGTRKHCTSVLSLKQNTKDSPIP*PPCHAP
Trigger: TGGGGCATGACAGGGTGGCAATGGGATTGGGGAGTC...TTTTGTGTTTTGTTTGAGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000417379.6
CDS-3UTR CAA 90 bp AACACAAAACAAATCCCCCTGCGAAGCAACAATAAACTTTACATCTCTTTGGCAAGGAACAAGAAAACATaGCACCAGCGTTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: NTKQIPLRSNNKLYISLARNKKT*HQRSKP
Trigger: AGGCTTAGAACGCTGGTGCAATGTTTTCTTGTTCCT...TGCCAAAGAGATGTAAAGTTTATTGTTGCTTCGCAGGGGGATTTGTTTTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS CCA 72 bp GGTGGACTGGGGGCGCAGCCGGCGCAGTCAGGGTCGTaGCCGGCGGCGGGTGCGGCCTCCTCTAGGCGGATG +
Preference number: 6 (lower is better)
Translates to: GGLGAQPAQSGS*PAAGAASSRRM
Trigger: CATCCGCCTAGAGGAGGCCGCACCCGCCGCCGGCCACGACCCTGACTGCGCCGGCTGCGCCCCCAGTCCACC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 72 bp CCGGCTCGGGGGAGGCCCGTGGGGTCTGCTTTGGACTaGGGCAGCCCTCAGCGTGGCCGCCCGCAGAGACGG +
Preference number: 6 (lower is better)
Translates to: PARGRPVGSALD*GSPQRGRPQRR
Trigger: CCGTCTCTGCGGGCGGCCACGCTGAGGGCTGCCCCAGTCCAAAGCAGACCCCACGGGCCTCCCCCGAGCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS GCA 72 bp TCGGGCCCGTTCTGTGCTGCCGTGGCCGGGGAGCCCTaGGCCAGGTCGGCTGCGTACTCGTCCCCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: SGPFCAAVAGEP*ARSAAYSSPSA
Trigger: TGCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS GCA 72 bp GGCCCAGCAGCGGCTCCATGGCCAGCGAGGCGGCGGTaGTGCCGTCAGAGTCGTCGTCCTGGTCCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: GPAAAPWPARRR*CRQSRRPGPRW
Trigger: CCACCGCGGACCAGGACGACGACTCTGACGGCAGCACCGCCGCCTCGCTGGCCATGGAGCCGCTGCTGGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 72 bp CAGAGTCGTCGTCCTGGTCCGCGGTGGCAGGTGGACTaGGGGCGCAGCCGGCGCAGTCAGGGTCGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: QSRRPGPRWQVD*GRSRRSQGRGR
Trigger: CCGGCCACGACCCTGACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACGACGACTCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 72 bp AGCGAGGCGGCGGTGCTGCCGTCAGAGTCGTCGTCCTaGTCCGCGGTGGCAGGTGGACTGGGGGCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: SEAAVLPSESSS*SAVAGGLGAQP
Trigger: CGGCTGCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACGACGACTCTGACGGCAGCACCGCCGCCTCGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS GCA 72 bp GAGTGGCAGGACGTACACGTCGGGCCCGTTCTGTGCTaGCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: EWQDVHVGPVLC*RGRGALRQVGC
Trigger: GCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGACGTGTACGTCCTGCCACTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS GCA 72 bp CGTGAGTGGCAGGACGTACACGTCGGGCCCGTTCTGTaGTGCCGTGGCCGGGGAGCCCTGCGCCAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: REWQDVHVGPVL*CRGRGALRQVG
Trigger: GCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGACGTGTACGTCCTGCCACTCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS GCA 72 bp TCGTCGCCGTCCGCGTGGAAGCCGTCGCCCGCGAACTaGTCCAGCAGCGGGAAGGACGAGGCAGCGGCGAGC +
Preference number: 6 (lower is better)
Translates to: SSPSAWKPSPAN*SSSGKDEAAAS
Trigger: GCTCGCCGCTGCCTCGTCCTTCCCGCTGCTGGAGCAGTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
CDS GCA 72 bp CCAGCAGCGGCTCCATGGCCAGCGAGGCGGCGGTGCTaGCGTCAGAGTCGTCGTCCTGGTCCGCGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: PAAAPWPARRRC*RQSRRPGPRWQ
Trigger: CTGCCACCGCGGACCAGGACGACGACTCTGACGGCAGCACCGCCGCCTCGCTGGCCATGGAGCCGCTGCTGG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 72 bp GCCGTCAGAGTCGTCGTCCTGGTCCGCGGTGGCAGGTaGACTGGGGGCGCAGCCGGCGCAGTCAGGGTCGTG +
Preference number: 6 (lower is better)
Translates to: AVRVVVLVRGGR*TGGAAGAVRVV
Trigger: CACGACCCTGACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACGACGACTCTGACGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 72 bp CGGTGCTGCCGTCAGAGTCGTCGTCCTGGTCCGCGGTaGCAGGTGGACTGGGGGCGCAGCCGGCGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: RCCRQSRRPGPR*QVDWGRSRRSQ
Trigger: CTGACTGCGCCGGCTGCGCCCCCAGTCCACCTGCCACCGCGGACCAGGACGACGACTCTGACGGCAGCACCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 72 bp GCGCACAGCTCCGTCAGCACGTCGTCGCCGTCCGCGTaGAAGCCGTCGCCCGCGAACTGCTCCAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: AHSSVSTSSPSA*KPSPANCSSSG
Trigger: CCCGCTGCTGGAGCAGTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGACGTGCTGACGGAGCTGTGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374792.6
CDS CCA 72 bp CCCGGAGAAAGACACAGCCACCACGGCGAGGGAGGATaGCCAGGACAGCTCGCTGAGCGGGGCGCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: PGERHSHHGEGG*PGQLAERGAVG
Trigger: CCCGACGGCGCCCCGCTCAGCGAGCTGTCCTGGCCATCCTCCCTCGCCGTGGTGGCTGTGTCTTTCTCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS CCA 72 bp GCAGGACGTACACGTCGGGCCCGTTCTGTGCTGCCGTaGCCGGGGAGCCCTGCGCCAGGTCGGCTGCGTACT +
Preference number: 6 (lower is better)
Translates to: AGRTRRARSVLP*PGSPAPGRLRT
Trigger: AGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCACAGAACGGGCCCGACGTGTACGTCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS CCA 72 bp GTCTCGGTCACCGTCAGCACGTCGTCGCCGTCCGCGTaGAAGCCGTCGCCCGCGAACTGCTCCAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: VSVTVSTSSPSA*KPSPANCSSSG
Trigger: CCCGCTGCTGGAGCAGTTCGCGGGCGACGGCTTCCACGCGGACGGCGACGACGTGCTGACGGTGACCGAGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000417379.6
ENST00000573441.1
CDS CAA 72 bp GGACAGCGGCTGCCGCTGTTGTTGTTGGCTGACACGTaGGAGCGCCAGTGCCCGCGCTGGGCGGCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: GQRLPLLLLADT*ERQCPRWAALR
Trigger: GCGGAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CAA 90 bp CAGGACTCTGGACAGCGGCTGCCGCTGTTGTTGTTGGCTGACACGTaGGAGCGCCAGTGCCCGCGCTGGGCGGCCCTCCGCGCTCCCACC +
Preference number: 6 (lower is better)
Translates to: QDSGQRLPLLLLADT*ERQCPRWAALRAPT
Trigger: GGTGGGAGCGCGGAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CCA 72 bp GGGGGTCCCCACCTGCTTCTGCAGAGAGCGGAAGGCTaGCACCACATCCGGCCTCCTGGCCTGCAGGCCGTC +
Preference number: 6 (lower is better)
Translates to: GGPHLLLQRAEG*HHIRPPGLQAV
Trigger: GACGGCCTGCAGGCCAGGAGGCCGGATGTGGTGCCAGCCTTCCGCTCTCTGCAGAAGCAGGTGGGGACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS CAA 90 bp GAGACGGGGTCCCAGGACTCTGGACAGCGGCTGCCGCTGTTGTTGTaGGCTGACACGTTGGAGCGCCAGTGCCCGCGCTGGGCGGCCCTC +
Preference number: 6 (lower is better)
Translates to: ETGSQDSGQRLPLLL*ADTLERQCPRWAAL
Trigger: GAGGGCCGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCCGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CAA 90 bp GCAGAGACGGGGTCCCAGGACTCTGGACAGCGGCTGCCGCTGTTGTaGTTGGCTGACACGTTGGAGCGCCAGTGCCCGCGCTGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: AETGSQDSGQRLPLL*LADTLERQCPRWAA
Trigger: GGCCGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCCGTCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CAA 90 bp CCCGCAGAGACGGGGTCCCAGGACTCTGGACAGCGGCTGCCGCTGTaGTTGTTGGCTGACACGTTGGAGCGCCAGTGCCCGCGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: PAETGSQDSGQRLPL*LLADTLERQCPRWA
Trigger: CGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCCGTCTCTGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CAA 90 bp GCCCAGCGGTCCGACAGGGTCAGCTGCAGCTGGGGCTTGGGCAGCTaGAGCTGCTGCTCCCGGACCGTGTACGCCAGCACCTGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: AQRSDRVSCSWGLGS*SCCSRTVYASTCWS
Trigger: GGACCAGCAGGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573441.1
CDS CAA 90 bp TTCGGTGGCGCCCAGCGGTCCGACAGGGTCAGCTGCAGCTGGGGCTaGGGCAGCTTGAGCTGCTGCTCCCGGACCGTGTACGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: FGGAQRSDRVSCSWG*GSLSCCSRTVYAST
Trigger: GGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGGCGCCACCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573441.1
CDS CAA 90 bp GGGAAGGCCTCCGCGCCGCGGCCCGCCTCCCACTTGTACTCAAAATaGAGGCCTCGGCTGGTCTCGGTCACCGTCAGCACGTCGTCGCCG +
Preference number: 6 (lower is better)
Translates to: GKASAPRPASHLYSK*RPRLVSVTVSTSSP
Trigger: CGGCGACGACGTGCTGACGGTGACCGAGACCAGCCGAGGCCTCAATTTTGAGTACAAGTGGGAGGCGGGCCGCGGCGCGGAGGCCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS CAA 90 bp CTCAGCGTGGCCGGGAAGGCCTCCGCGCCGCGGCCCGCCTCCCACTaGTACTCAAAATTGAGGCCTCGGCTGGTCTCGGTCACCGTCAGC +
Preference number: 6 (lower is better)
Translates to: LSVAGKASAPRPASH*YSKLRPRLVSVTVS
Trigger: GCTGACGGTGACCGAGACCAGCCGAGGCCTCAATTTTGAGTACAAGTGGGAGGCGGGCCGCGGCGCGGAGGCCTTCCCGGCCACGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS TCA 72 bp GGACTCTGGACAGCGGCTGCCGCTGTTGTTGTTGGCTaGCACGTTGGAGCGCCAGTGCCCGCGCTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: GLWTAAAAVVVG*HVGAPVPALGG
Trigger: GCCGCCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS GCA 72 bp TGCTGCCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGCATTCTCAAACTCCTG +
Preference number: 6 (lower is better)
Translates to: CCRGRGALRQVG*VLVPLRILKLL
Trigger: CAGGAGTTTGAGAATGCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417379.6
ENST00000575363.1
CDS CCA 72 bp CCCGGAGAAAGACACAGCCACCACGGCGAGGGAGGATaGCCAGGACAGCTCGCTGAGCGGGGCGCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: PGERHSHHGEGG*PGQLAERGAVC
Trigger: ACAGACGGCGCCCCGCTCAGCGAGCTGTCCTGGCCATCCTCCCTCGCCGTGGTGGCTGTGTCTTTCTCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572798.1
CDS CAA 90 bp TACCAGCGGTCCGACAGGGTCAGCTGCAGCTGGGGCTTGGGCAGCTaGAGCTGCTGCTCCCGGACCGTGTACGCCAGCACCTGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: YQRSDRVSCSWGLGS*SCCSRTVYASTCWS
Trigger: GGACCAGCAGGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS CAA 90 bp GCTGCTTCTGCGGGGTCGAAGTGCGAGCTGAAGGCGAAGCTGGGGTaGAAGAAGGACGACGACATGGCCGGGCCAGCGGCCGGCGGGCAT +
Preference number: 6 (lower is better)
Translates to: AASAGSKCELKAKLG*KKDDDMAGPAAGGH
Trigger: ATGCCCGCCGGCCGCTGGCCCGGCCATGTCGTCGTCCTTCTTCAACCCCAGCTTCGCCTTCAGCTCGCACTTCGACCCCGCAGAAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572798.1
CDS GCA 72 bp TGCTGCCGTGGCCGGGGAGCCCTGCGCCAGGTCGGCTaGGTACTCGTCCCCCTCCGCATTCTCAAACTCCTT +
Preference number: 6 (lower is better)
Translates to: CCRGRGALRQVG*VLVPLRILKLL
Trigger: AAGGAGTTTGAGAATGCGGAGGGGGACGAGTACGCAGCCGACCTGGCGCAGGGCTCCCCGGCCACGGCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000374792.6
CDS GCA 72 bp GCTGTGGGCCGCTGCTCGGGCTGCAGCCAGCAGAACTaGATCACCTCGTACCAGCGGTCCGACAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: AVGRCSGCSQQN*ITSYQRSDRVS
Trigger: GCTGACCCTGTCGGACCGCTGGTACGAGGTGATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS GCA 72 bp AGGTGCACCTCCTCGGCTGTGGGCCGCTGCTCGGGCTaGAGCCAGCAGAACTGCATCACCTCGTACCAGCGG +
Preference number: 6 (lower is better)
Translates to: RCTSSAVGRCSG*SQQNCITSYQR
Trigger: CCGCTGGTACGAGGTGATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS GCA 72 bp GACAGCAGCAGGTGCACCTCCTCGGCTGTGGGCCGCTaGTCGGGCTGCAGCCAGCAGAACTGCATCACCTCG +
Preference number: 6 (lower is better)
Translates to: DSSRCTSSAVGR*SGCSQQNCITS
Trigger: CGAGGTGATGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGCACCTGCTGCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS GCA 72 bp TGCCTGAGGTGGCCTCGGCCGTGTCCTCATCCTCACTaGTGGGTGCCTCCACCTCGGGAGAGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CLRWPRPCPHPH*WVPPPRESCCC
Trigger: GCAGCAGCAGCTCTCCCGAGGTGGAGGCACCCAGCAGTGAGGATGAGGACACGGCCGAGGCCACCTCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS GCA 72 bp GAGCGGAAGGCTGGCACCACATCCGGCCTCCTGGCCTaGAGGCCGTCGCTGGACGTGTCGGTGAAGATGCCT +
Preference number: 6 (lower is better)
Translates to: ERKAGTTSGLLA*RPSLDVSVKMP
Trigger: AGGCATCTTCACCGACACGTCCAGCGACGGCCTGCAGGCCAGGAGGCCGGATGTGGTGCCAGCCTTCCGCTC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS GCA 72 bp CTGCCCGGGGGCCAGCCGGGTCCTGCCGATACAGCGTaGAATCAGGTAGCACAGGGTCAGCATTGGGGGCCT +
Preference number: 6 (lower is better)
Translates to: LPGGQPGPADTA*NQVAQGQHWGP
Trigger: AGGCCCCCAATGCTGACCCTGTGCTACCTGATTGCACGCTGTATCGGCAGGACCCGGCTGGCCCCCGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575363.1
CDS CCA 72 bp CCCAGGACTCTGGACAGCGGCTGCCGCTGTTGTTGTTaGCTGACACGTTGGAGCGCCAGTGCCCGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: PRTLDSGCRCCC*LTRWSASARAG
Trigger: CCCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CAA 72 bp GGGTCCCAGGACTCTGGACAGCGGCTGCCGCTGTTGTaGTTGGCTGACACGTTGGAGCGCCAGTGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: GSQDSGQRLPLL*LADTLERQCPR
Trigger: GCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CAA 90 bp ATCACCTCGTACCAGCGGTCCGACAGGGTCAGCTGCAGCTGGGGCTaGGGCAGCTTGAGCTGCTGCTCCCGGACCGTGTACGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: ITSYQRSDRVSCSWG*GSLSCCSRTVYAST
Trigger: GGTGCTGGCGTACACGGTCCGGGAGCAGCAGCTCAAGCTGCCCAAGCCCCAGCTGCAGCTGACCCTGTCGGACCGCTGGTACGAGGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS TCA 72 bp GGTACAGGAGGCTGTGCCGGCCCACGTCTGTGGACTTaGGGAGCTGCACTGAGCGCCCAGGCTGCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: GTGGCAGPRLWT*GAALSAQAAWP
Trigger: TGGCCAAGCAGCCTGGGCGCTCAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCTCCTGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS GCA 72 bp GGTGGCCTCGGCCGTGTCCTCATCCTCACTGCTGGGTaGCTCCACCTCGGGAGAGCTGCTGCTGCCATTCAG +
Preference number: 6 (lower is better)
Translates to: GGLGRVLILTAG*LHLGRAAAAIQ
Trigger: CTGAATGGCAGCAGCAGCTCTCCCGAGGTGGAGGCACCCAGCAGTGAGGATGAGGACACGGCCGAGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS CCA 72 bp ACAGGTAGGACAGCAGCAGGTGCACCTCCTCGGCTGTaGGCCGCTGCTCGGGCTGCAGCCAGCAGAACTGCA +
Preference number: 6 (lower is better)
Translates to: TGRTAAGAPPRL*AAARAAASRTA
Trigger: TGCAGTTCTGCTGGCTGCAGCCCGAGCAGCGGCCCACAGCCGAGGAGGTGCACCTGCTGCTGTCCTACCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS CCA 72 bp TCGTTGAGGCCACTGCTTCTGCAGAGAGCGGAAGGCTaGCACCACATCCGGCCTCCTGGCCTGCAGGCCGTC +
Preference number: 6 (lower is better)
Translates to: SLRPLLLQRAEG*HHIRPPGLQAV
Trigger: GACGGCCTGCAGGCCAGGAGGCCGGATGTGGTGCCAGCCTTCCGCTCTCTGCAGAAGCAGTGGCCTCAACGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374792.6
ENST00000570932.5
CDS CAA 72 bp AGGTACAGGAGGCTGTGCCGGCCCACGTCTGTGGACTaGAGGAGCTGCACTGAGCGCCCAGGCTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RYRRLCRPTSVD*RSCTERPGCLA
Trigger: GGCCAAGCAGCCTGGGCGCTCAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000575363.1
CDS CAA 72 bp TCCGCGCCGCGGCCCGCCTCCCACTTGTACTCAAAATaGAGGCCTCGGCTGGTCTCGGTCACCGTCAGCACG +
Preference number: 6 (lower is better)
Translates to: SAPRPASHLYSK*RPRLVSVTVST
Trigger: CGTGCTGACGGTGACCGAGACCAGCCGAGGCCTCAATTTTGAGTACAAGTGGGAGGCGGGCCGCGGCGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS CAA 72 bp TCCCAGGACTCTGGACAGCGGCTGCCGCTGTTGTTGTaGGCTGACACGTTGGAGCGCCAGTGCCCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: SQDSGQRLPLLL*ADTLERQCPRW
Trigger: CCAGCGCGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS CAA 72 bp ACGGGGTCCCAGGACTCTGGACAGCGGCTGCCGCTGTaGTTGTTGGCTGACACGTTGGAGCGCCAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: TGSQDSGQRLPL*LLADTLERQCP
Trigger: CGGGCACTGGCGCTCCAACGTGTCAGCCAACAACAACAGCGGCAGCCGCTGTCCAGAGTCCTGGGACCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
CDS TCA 72 bp CTGCAGGCCGTCGCTGGACGTGTCGGTGAAGATGCCTaGGGTGGCCTCGGCCGTGTCCTCATCCTCACTGCT +
Preference number: 6 (lower is better)
Translates to: LQAVAGRVGEDA*GGLGRVLILTA
Trigger: AGCAGTGAGGATGAGGACACGGCCGAGGCCACCTCAGGCATCTTCACCGACACGTCCAGCGACGGCCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000570932.5
CDS TCA 72 bp GGTACAGGAGGCTGTGCCGGCCCACGTCTGTGGACTTaGGGAGCTGCACTTGGGGCCACCATCAGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GTGGCAGPRLWT*GAALGATIRSQ
Trigger: CTGGCTCCTGATGGTGGCCCCAAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCTCCTGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572339.5
CDS GCA 72 bp CCGCTCTTGGTCTGGTCCACGACGAGCAGGTTGCTATaGACCTCGTCCACCAGCTCTGGCGCGATCCAGCGC +
Preference number: 6 (lower is better)
Translates to: PLLVWSTTSRLL*TSSTSSGAIQR
Trigger: GCGCTGGATCGCGCCAGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 72 bp GCACCTGCTGGTCCGAGTGCTGGGGATAGGGCTGCGTaGCCAGCTCAAAGAGCTCCCAGATGGTCACGCCCA +
Preference number: 6 (lower is better)
Translates to: APAGPSAGDRAA*PAQRAPRWSRP
Trigger: TGGGCGTGACCATCTGGGAGCTCTTTGAGCTGGGCACGCAGCCCTATCCCCAGCACTCGGACCAGCAGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 72 bp CCGCAGAGAGCGCCAGCGCCGTTCAAACTCCTCCTCTaGTTCGGTGGCGCCCTTGGCACACAGGTAGGACAG +
Preference number: 6 (lower is better)
Translates to: PQRAPAPFKLLL*FGGALGTQVGQ
Trigger: CTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAACGGCGCTGGCGCTCTCTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS TCA 72 bp CGACGGGCTGAAGACCTCATAGCCACCATCACTGGCTaGGGACGGGATGTCCAGGGAGTCCAGGGAGTCGGG +
Preference number: 6 (lower is better)
Translates to: RRAEDLIATITG*GRDVQGVQGVG
Trigger: CCCGACTCCCTGGACTCCCTGGACATCCCGTCCTCAGCCAGTGATGGTGGCTATGAGGTCTTCAGCCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326724.9
ENST00000417379.6
CDS GCA 72 bp TCTCAAACTCCTGCTGCCCGGGGGCCAGCCGGGTCCTaGCGATACAGCGTGCAATCAGGTAGCACAGGGTCA +
Preference number: 6 (lower is better)
Translates to: SQTPAARGPAGS*RYSVQSGSTGS
Trigger: TGACCCTGTGCTACCTGATTGCACGCTGTATCGGCAGGACCCGGCTGGCCCCCGGGCAGCAGGAGTTTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575363.1
CDS CCA 72 bp AGCGCCAGCGCCGTTCAAACTCCTCCTCTGCTTCGGTaGCGCCCTTGGCACACAGGTAGGACAGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: SASAVQTPPLLR*RPWHTGRTAAG
Trigger: ACCTGCTGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAACGGCGCTGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS CAA 72 bp AGGTACAGGAGGCTGTGCCGGCCCACGTCTGTGGACTaGAGGAGCTGCACTTGGGGCCACCATCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: RYRRLCRPTSVD*RSCTWGHHQEP
Trigger: TGGCTCCTGATGGTGGCCCCAAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572339.5
CDS CAA 90 bp AGGGACCACACATTCCCGCTCTTGGTCTGGTCCACGACGAGCAGGTaGCTATGCACCTCGTCCACCAGCTCTGGCGCGATCCAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RDHTFPLLVWSTTSR*LCTSSTSSGAIQRR
Trigger: TCTGCGCTGGATCGCGCCAGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 72 bp CATTCCCGCTCTTGGTCTGGTCCACGACGAGCAGGTTaGTATGCACCTCGTCCACCAGCTCTGGCGCGATCC +
Preference number: 6 (lower is better)
Translates to: HSRSWSGPRRAG*YAPRPPALARS
Trigger: GGATCGCGCCAGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS GCA 72 bp AGGCTGTGCCGGCCCACGTCTGTGGACTTGAGGAGCTaGACTGTAACCAAGCAGGGGGTTCAGGGACCCAGT +
Preference number: 6 (lower is better)
Translates to: RLCRPTSVDLRS*TVTKQGVQGPS
Trigger: ACTGGGTCCCTGAACCCCCTGCTTGGTTACAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000573469.1
ENST00000576053.1
ENST00000650574.1
CDS CCA 72 bp GTCACGCCCAGGGACCACACATTCCCGCTCTTGGTCTaGTCCACGACGAGCAGGTTGCTATGCACCTCGTCC +
Preference number: 6 (lower is better)
Translates to: VTPRDHTFPLLV*STTSRLLCTSS
Trigger: GGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTGGTCCCTGGGCGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS CCA 72 bp GCCGTTCAAACTCCTCCTCTGCTTCGGTGGCGCCCTTaGCACACAGGTAGGACAGCAGCAGGTGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: AVQTPPLLRWRP*HTGRTAAGAPP
Trigger: AGGAGGTGCACCTGCTGCTGTCCTACCTGTGTGCCAAGGGCGCCACCGAAGCAGAGGAGGAGTTTGAACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000650574.1
CDS GCA 72 bp AGTTCCGCAGGGCCAGGTCGCTGTGCACGAAATTGTTaGGATGAAGGTGCAGGACGCCACAGGCCACCTCAC +
Preference number: 6 (lower is better)
Translates to: SSAGPGRCARNC*DEGAGRHRPPH
Trigger: GTGAGGTGGCCTGTGGCGTCCTGCACCTTCATCGCAACAATTTCGTGCACAGCGACCTGGCCCTGCGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000572339.5
ENST00000650574.1
CDS GCA 72 bp CATCAGGAGCCAGGGTCTCTTGAGAGCAGGGGCCGCTaGTTCCCAGAAAAGCCACGGAGCTGCAGGATCCAT +
Preference number: 6 (lower is better)
Translates to: HQEPGSLESRGR*FPEKPRSCRIH
Trigger: ATGGATCCTGCAGCTCCGTGGCTTTTCTGGGAAGCAGCGGCCCCTGCTCTCAAGAGACCCTGGCTCCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572339.5
ENST00000573469.1
ENST00000576053.1
CDS CAA 72 bp ACATTCCCGCTCTTGGTCTGGTCCACGACGAGCAGGTaGCTATGCACCTCGTCCACCAGCTCTGGCGCGATC +
Preference number: 6 (lower is better)
Translates to: TFPLLVWSTTSR*LCTSSTSSGAI
Trigger: GATCGCGCCAGAGCTGGTGGACGAGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS CAA 72 bp CAGATGGTCACGCCCAGGGACCACACATTCCCGCTCTaGGTCTGGTCCACGACGAGCAGGTTGCTATGCACC +
Preference number: 6 (lower is better)
Translates to: QMVTPRDHTFPL*VWSTTSRLLCT
Trigger: GGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTGGTCCCTGGGCGTGACCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS CAA 72 bp AGGTACAGGAGGCTGTGCCGGCCCACGTCTGTGGACTaGAGGAGCTGCACTGTAACCAAGCAGGGGGTTCAG +
Preference number: 6 (lower is better)
Translates to: RYRRLCRPTSVD*RSCTVTKQGVQ
Trigger: CTGAACCCCCTGCTTGGTTACAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000573469.1
ENST00000576053.1
ENST00000650574.1
CDS CCA 72 bp AGATGGTCACGCCCAGGGACCACACATTCCCGCTCTTaGTCTGGTCCACGACGAGCAGGTTGCTATGCACCT +
Preference number: 6 (lower is better)
Translates to: RWSRPGTTHSRS*SGPRRAGCYAP
Trigger: AGGTGCATAGCAACCTGCTCGTCGTGGACCAGACCAAGAGCGGGAATGTGTGGTCCCTGGGCGTGACCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326724.9
ENST00000374792.6
ENST00000417379.6
ENST00000573441.1
ENST00000650574.1
CDS CAA 90 bp ATTTCCTTCAGGTACAGGAGGCTGTGCCGGCCCACGTCTGTGGACTaGAGGAGCTGCACTGTAACCAAGCAGGGGGTTCAGGGACCCAGT +
Preference number: 6 (lower is better)
Translates to: ISFRYRRLCRPTSVD*RSCTVTKQGVQGPS
Trigger: ACTGGGTCCCTGAACCCCCTGCTTGGTTACAGTGCAGCTCCTCAAGTCCACAGACGTGGGCCGGCACAGCCTCCTGTACCTGAAGGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000573469.1
ENST00000576053.1
ENST00000650574.1