RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AATF (Homo sapiens)

Ensembl gene IDs: ENSG00000275700, ENSG00000276072

Ensembl transcript IDs: ENST00000610798.4, ENST00000613840.1, ENST00000615319.1, ENST00000616062.1, ENST00000616392.1, ENST00000616434.2, ENST00000617141.1, ENST00000619387.5, ENST00000620004.2, ENST00000622432.1, ENST00000631470.1, ENST00000631530.1, ENST00000631709.1, ENST00000632039.1, ENST00000632435.1, ENST00000633157.1, ENST00000633401.1, ENST00000633966.1, ENST00000679508.1, ENST00000679600.1, ENST00000679881.1, ENST00000679985.1, ENST00000679997.1, ENST00000680330.1, ENST00000680340.1, ENST00000680356.1, ENST00000680579.1, ENST00000680782.1, ENST00000680807.1, ENST00000681062.1, ENST00000681070.1, ENST00000681800.1

Found 1139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTG +
Preference number: 1 (lower is better)
Translates to: GPAAAPAKAPTGCRR*AMSIPVAFVGRVEL
Trigger: CAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR CCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGG +
Preference number: 1 (lower is better)
Translates to: VSSIWTSSRTSQGAH*VSEVGDVNPRGLRR
Trigger: CCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR CCA 90 bp CCAAGGCGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTAC +
Preference number: 1 (lower is better)
Translates to: PRRPLGVGGGRCQSP*PSSGGWSWPKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR CCA 90 bp GTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCA +
Preference number: 1 (lower is better)
Translates to: VGGGRCQSPWPSSGG*SWPKRERYSSVLAS
Trigger: TGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR GCA 90 bp CTCAGATCCCTTGAGACTGGGCAATCAGGGTCACCGGGGTGCAAGTaGTCATGGAAGGCTGCCCCAGCACAACAGGGTGATCCTCGGGAA +
Preference number: 1 (lower is better)
Translates to: LRSLETGQSGSPGCK*SWKAAPAQQGDPRE
Trigger: TTCCCGAGGATCACCCTGTTGTGCTGGGGCAGCCTTCCATGAGCACTTGCACCCCGGTGACCCTGATTGCCCAGTCTCAAGGGATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR CCA 90 bp GGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTC +
Preference number: 1 (lower is better)
Translates to: GGRCQSPWPSSGGWS*PKRERYSSVLASSF
Trigger: GAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR CCA 90 bp TCCCTTGAGACTGGGCAATCAGGGTCACCGGGGTGCAAGTGCTCATaGAAGGCTGCCCCAGCACAACAGGGTGATCCTCGGGAAGAATAT +
Preference number: 1 (lower is better)
Translates to: SLETGQSGSPGCKCS*KAAPAQQGDPREEY
Trigger: ATATTCTTCCCGAGGATCACCCTGTTGTGCTGGGGCAGCCTTCCATGAGCACTTGCACCCCGGTGACCCTGATTGCCCAGTCTCAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR CCA 90 bp GATCTCCGGTTCCCCTGGCAAACTCTCTGGGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAACTCGATAGACAGAGCGCTTGGTCTG +
Preference number: 1 (lower is better)
Translates to: DLRFPWQTLWDRLSC*LRFAKNSIDRALGL
Trigger: CAGACCAAGCGCTCTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR TCA 90 bp ACCGGGGTGCAAGTGCTCATGGAAGGCTGCCCCAGCACAACAGGGTaGTCCTCGGGAAGAATATGCCCTTGCCAAAGGCTGGAAATTGGA +
Preference number: 1 (lower is better)
Translates to: TGVQVLMEGCPSTTG*SSGRICPCQRLEIG
Trigger: TCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGATCACCCTGTTGTGCTGGGGCAGCCTTCCATGAGCACTTGCACCCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR GCA 90 bp CCCCTGGCAAACTCTCTGGGACAGGCTGAGCTGCTGGCTCAGGTTTaGCAAGAACTCGATAGACAGAGCGCTTGGTCTGTGTCCTTCGAA +
Preference number: 1 (lower is better)
Translates to: PLANSLGQAELLAQV*QELDRQSAWSVSFE
Trigger: TTCGAAGGACACAGACCAAGCGCTCTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR GCA 90 bp AAGGATCTCCGGTTCCCCTGGCAAACTCTCTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAGAACTCGATAGACAGAGCGCTTGGT +
Preference number: 1 (lower is better)
Translates to: KDLRFPWQTLWDRLS*WLRFAKNSIDRALG
Trigger: ACCAAGCGCTCTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR CCA 90 bp GCACAACAGGGTGATCCTCGGGAAGAATATGCCCTTGCCAAAGGCTaGAAATTGGAGCTCCCCACTGCAGTGGTCTCTGCAATTCCAACA +
Preference number: 1 (lower is better)
Translates to: AQQGDPREEYALAKG*KLELPTAVVSAIPT
Trigger: TGTTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGATCACCCTGTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR GCA 90 bp CTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTCCTCCATCTCCAGCTTCCTCTTTGC +
Preference number: 1 (lower is better)
Translates to: LKCAVPVDCKVGKAL*HEAGIVLHLQLPLC
Trigger: GCAAAGAGGAAGCTGGAGATGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613840.1
ENST00000632039.1
ENST00000680579.1
3UTR CCA 90 bp AGGGTGATCCTCGGGAAGAATATGCCCTTGCCAAAGGCTGGAAATTaGAGCTCCCCACTGCAGTGGTCTCTGCAATTCCAACACCAAGTT +
Preference number: 1 (lower is better)
Translates to: RVILGKNMPLPKAGN*SSPLQWSLQFQHQV
Trigger: AACTTGGTGTTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGATCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR GCA 90 bp GGAAGAATATGCCCTTGCCAAAGGCTGGAAATTGGAGCTCCCCACTaGAGTGGTCTCTGCAATTCCAACACCAAGTTGGTGCAGCATTTA +
Preference number: 1 (lower is better)
Translates to: GRICPCQRLEIGAPH*SGLCNSNTKLVQHL
Trigger: TAAATGCTGCACCAACTTGGTGTTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR CCA 90 bp AATATGCCCTTGCCAAAGGCTGGAAATTGGAGCTCCCCACTGCAGTaGTCTCTGCAATTCCAACACCAAGTTGGTGCAGCATTTACTTTC +
Preference number: 1 (lower is better)
Translates to: NMPLPKAGNWSSPLQ*SLQFQHQVGAAFTF
Trigger: GAAAGTAAATGCTGCACCAACTTGGTGTTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR CCA 90 bp GAGCTGCTGGCTCAGGTTTGCCAAGAACTCGATAGACAGAGCGCTTaGTCTGTGTCCTTCGAAGTAATCTCTCTTTGTCCATCAGAATAT +
Preference number: 1 (lower is better)
Translates to: ELLAQVCQELDRQSA*SVSFEVISLCPSEY
Trigger: ATATTCTGATGGACAAAGAGAGATTACTTCGAAGGACACAGACCAAGCGCTCTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR TCA 90 bp GTCCTTCGAAGTAATCTCTCTTTGTCCATCAGAATATGGTCGATCTaGGTCAAGATTGAGCGTTCAAAGGCACCAAAACCCTTCCCCAGT +
Preference number: 1 (lower is better)
Translates to: VLRSNLSLSIRIWSI*VKIERSKAPKPFPS
Trigger: ACTGGGGAAGGGTTTTGGTGCCTTTGAACGCTCAATCTTGACTCAGATCGACCATATTCTGATGGACAAAGAGAGATTACTTCGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR TCA 90 bp AGTGTCTGGGTACTGGAAAAGCAACTCTTCCTGAAGACCTACCAATaGCCTCAACAATGCTTTAAGTGCCTTGTGACTATTTTTCAGGGC +
Preference number: 1 (lower is better)
Translates to: SVWVLEKQLFLKTYQ*PQQCFKCLVTIFQG
Trigger: GCCCTGAAAAATAGTCACAAGGCACTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTTCCAGTACCCAGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR CCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 2 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: VAFKGGVGRDSALACIRHRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679997.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp GGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 2 (lower is better)
Translates to: GVGRDSALACIRHRFGTQTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...CTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGACTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: KGGVGRDSALACIRHRFGLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: AFKGGVGRDSALACIRHRLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CCA 90 bp CGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: RGLRREGGAGQKESGTVLLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...CAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR GCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGTCCTCGGGAAGAATATaGCCTTGCCAAAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: GGVGRDSALACIRHRFGTSSGRI*PCQRLE
Trigger: TTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGA...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp AACAATGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 2 (lower is better)
Translates to: NNALYLWRLKAGLGGTAPSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...GGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679997.1
ENST00000680340.1
3UTR-3UTR CCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR GCA 90 bp CCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGGGAAGAATATGCCCTTaGCAAAGGCTGGAAATTGGA +
Preference number: 2 (lower is better)
Translates to: PLGVGGGRCQSPWPSSGGGRICP*QRLEIG
Trigger: TCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCC...CCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CCA 90 bp TGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: CSLFVAFKGGVGRDSALAPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...CGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679997.1
ENST00000680356.1
3UTR-3UTR CCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: LGTGSERSIFPGASLLAQRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 2 (lower is better)
Translates to: TGSERSIFPGASLLAQPHTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp GATTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: DCKPLPSHGHLIVGIQGAPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...AGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR CAA 90 bp AGGCTGCCCCAGCACAACAGGGTGATCCTCGGGAAGAATATGCCCTaGCCAAAGGCTGGAAATTGGAGCTCCCCACTGCAGTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: RLPQHNRVILGKNMP*PKAGNWSSPLQWSL
Trigger: CAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGATCACCCTGTTGTGCTGGGGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR TCA 90 bp ACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: TAFPWPPDRWDPRSWSSVLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...AACGGAAGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
3UTR-3UTR GCA 90 bp ACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTTCAGGGTCACCGGGGTaGAAGTGCTCATGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: TAFPWPPDRWDPRSWSSVSGSPG*KCSWKA
Trigger: AGCCTTCCATGAGCACTTGCACCCCGGTGACCCTGA...AACGGAAGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: LGTGSERSIFPGASLLAQLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CCA 90 bp ACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 2 (lower is better)
Translates to: TAFPWPPDRWDPRSWSSVATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...AACGGAAGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp CAAGGCGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTTTGCTTCGTAACTTCTaGATTGCAAGCCACTGCCTT +
Preference number: 2 (lower is better)
Translates to: QGAHWVSEVGDVNPRGLRLLRNF*IASHCL
Trigger: AAGGCAGTGGCTTGCAATCCAGAAGTTACGAAGCAA...ACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
3UTR CAA 90 bp CTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTaGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LYLWRLKAGLGGTAP*RVLGTGSERSIFPG
Trigger: CCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CCA 90 bp GGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 2 (lower is better)
Translates to: GWSWPKRERYSSVLASSFTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...GAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATGCCCTTGCCAAAGGCTaGAAATTGGAGCTCCCCACT +
Preference number: 2 (lower is better)
Translates to: TGSERSIFPGASLLAQPHALAKG*KLELPT
Trigger: AGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGC...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp AGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: SIFPGASLLAQPHKVTGFLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...GAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CCA 90 bp ATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGGGTGCAAGTGCTCATaGAAGGCTGCCCCAGCACAA +
Preference number: 2 (lower is better)
Translates to: IRHRFGTQHLSRGFPTSSGCKCS*KAAPAQ
Trigger: TTGTGCTGGGGCAGCCTTCCATGAGCACTTGCACCC...TGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp GGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCATCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 2 (lower is better)
Translates to: GGAGQKESGTVLSWHHHSSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...TGAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp GCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCCATGAAGCTGGGATACCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: AVPVDCKVGKALCHEAGIPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...TATCCCAGCTTCATGGCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR-3UTR CCA 90 bp TTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGGATAGACAGAGCGCTTaGTCTGTGTCCTTCGAAGTA +
Preference number: 2 (lower is better)
Translates to: LQATAFPWPPDRWDPRSWDRQSA*SVSFEV
Trigger: TACTTCGAAGGACACAGACCAAGCGCTCTGTCTATC...CCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR CAA 90 bp CAGGGTGATCCTCGGGAAGAATATGCCCTTGCCAAAGGCTGGAAATaGGAGCTCCCCACTGCAGTGGTCTCTGCAATTCCAACACCAAGT +
Preference number: 2 (lower is better)
Translates to: QGDPREEYALAKGWK*ELPTAVVSAIPTPS
Trigger: ACTTGGTGTTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGATCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp TTGTGGATTTTGCTTCGTAACTTCTGGATTGCAAGCCACTGCCTTCCCATGGCCTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 2 (lower is better)
Translates to: LWILLRNFWIASHCLPMASGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...GGCCATGGGAAGGCAGTGGCTTGCAATCCAGAAGTTACGAAGCAAAATCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGTCATTCATTGTAGTATaGTCAATAGGTGCCATGAAA +
Preference number: 2 (lower is better)
Translates to: GGVGRDSALACIRHRFGTSFIVV*SIGAMK
Trigger: TTTCATGGCACCTATTGACCATACTACAATGAATGA...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR TCA 90 bp GATAGTCCTCCATCTCCAGCTTCCTCTTTGCAGGGACCCTTCTTCGTTGCTGCTGGCCACCTTTGTCCTTaGACAATGGGAAAACATCTG +
Preference number: 2 (lower is better)
Translates to: DSPPSPASSLQGPFFVAAGHLCP*TMGKHL
Trigger: CAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCC...AGCAGCAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAGATGGAGGACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR CCA 90 bp TTTTGTGGATTTTGCTTCGTAACTTCTGGATTGCAAGCCACTGCCTTCCCATGGGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 2 (lower is better)
Translates to: FCGFCFVTSGLQATAFPWATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...CCATGGGAAGGCAGTGGCTTGCAATCCAGAAGTTACGAAGCAAAATCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
3UTR-3UTR GCA 90 bp TGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCATTCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 2 (lower is better)
Translates to: WSWPKRERYSSVLASSFILQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...AATGAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR-3UTR CCA 90 bp AAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCATTGTAGTATGGTCAATCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: KRAVQFCPGIIIHCSMVNLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...ATTGACCATACTACAATGAATGATGATGCCAGGACAGAACTGTACCGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR TCA 90 bp CCATTTCTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCGGCCACCTTTGTCCTTaGACAATGGGAAAACATCTG +
Preference number: 2 (lower is better)
Translates to: PFLKCAVPVDCKVGKALCGHLCP*TMGKHL
Trigger: CAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCC...GCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR CCA 90 bp TCCTCACTTCCCGCATTGGGCTTTGTCCCATCTACTAGATATCTAGTGTCTGGGGGCACTGGAAAATTCTaGGCCACCTTTGTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: SSLPALGFVPSTRYLVSGGTGKF*ATFVLE
Trigger: TTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC...CCCAGACACTAGATATCTAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR CCA 90 bp GATAGTCCTCCATCTCCAGCTTCCTCTTTGCAGGGACCCTTCTTCGTTGCTGCTTTTGTCCTTGAACAATaGGAAAACATCTGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: DSPPSPASSLQGPFFVAAFVLEQ*ENIWLR
Trigger: CCTCAACCAGATGTTTTCCCATTGTTCAAGGACAAA...AGCAGCAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAGATGGAGGACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR CCA 90 bp GCAATTCCAACACCAAGTTGGTGCAGCATTTACTTTCAAACACTTTGTGTACTACTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: AIPTPSWCSIYFQTLCVLLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...TAGTACACAAAGTGTTTGAAAGTAAATGCTGCACCAACTTGGTGTTGGAATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp TGCAATTCCAACACCAAGTTGGTGCAGCATTTACTTTCAAACACTTTGTGTACTACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 2 (lower is better)
Translates to: CNSNTKLVQHLLSNTLCTTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...AGTACACAAAGTGTTTGAAAGTAAATGCTGCACCAACTTGGTGTTGGAATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR CAA 90 bp ATAGTCCTCCATCTCCAGCTTCCTCTTTGCAGGGACCCTTCTTCGTaGCTGCTTCTTCTCTTCTACCAGCTCATCATCTTCACTAGAAAT +
Preference number: 2 (lower is better)
Translates to: IVLHLQLPLCRDPSS*LLLLFYQLIIFTRN
Trigger: ATTTCTAGTGAAGATGATGAGCTGGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAGATGGAGGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR TCA 90 bp CCATTTCTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCCTGAAGACCTACCAATaGCCTCAACAATGCTTTAAG +
Preference number: 2 (lower is better)
Translates to: PFLKCAVPVDCKVGKALCLKTYQ*PQQCFK
Trigger: CTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAG...GCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR GCA 90 bp TGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCATTGAAACCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 2 (lower is better)
Translates to: WSWPKRERYSSVLASSFIETEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGTTTC...AATGAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CCA 90 bp CTGGGTACTGGAAAAGCAACTCTTCCTGAAGACCTACCAATGACCTCAACAATGGGCACTGGAAAATTCTaGGCCACCTTTGTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: LGTGKATLPEDLPMTSTMGTGKF*ATFVLE
Trigger: TTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC...CATTGTTGAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTTCCAGTACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR TCA 90 bp TCTTCACTAGAAATCTCCTCACTTCCCGCATTGGGCTTTGTCCCATCTACTAGAAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTC +
Preference number: 2 (lower is better)
Translates to: SSLEISSLPALGFVPSTRKSNSS*RPTNDL
Trigger: GAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTT...TCTAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGGAGATTTCTAGTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR TCA 90 bp GTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCATGTACTATACATATTCTaGGCTGCATTTTCGCACACA +
Preference number: 2 (lower is better)
Translates to: VELAKKRAVQFCPGIIIHVLYIF*AAFSHT
Trigger: TGTGTGCGAAAATGCAGCTCAGAATATGTATAGTAC...ATGAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR GCA 90 bp GAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTCGCACACAAGTGCTTTaGATAACTATTTTTACTCAT +
Preference number: 2 (lower is better)
Translates to: ERSIFPGASLLAQPHKVTRTQVL*ITIFTH
Trigger: ATGAGTAAAAATAGTTATGCAAAGCACTTGTGTGCG...AGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CCA 90 bp ATCGTGCCATTTCTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGTTTGTCCTTGAACAATaGGAAAACATCTGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: IVPFLKCAVPVDCKVGKAFVLEQ*ENIWLR
Trigger: CCTCAACCAGATGTTTTCCCATTGTTCAAGGACAAA...CGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAGAAATGGCACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR TCA 90 bp TCTTCACTAGAAATCTCCTCACTTCCCGCATTGGGCTTTGTCCCATCTACTAGACTGAAGACCTACCAATaGCCTCAACAATGCTTTAAG +
Preference number: 2 (lower is better)
Translates to: SSLEISSLPALGFVPSTRLKTYQ*PQQCFK
Trigger: CTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAG...TCTAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGGAGATTTCTAGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR GCA 90 bp TCTTCACTAGAAATCTCCTCACTTCCCGCATTGGGCTTTGTCCCATCTACTAGACAACAATGCTTTAAGTaGCTTGTGACTATTTTTCAG +
Preference number: 2 (lower is better)
Translates to: SSLEISSLPALGFVPSTRQQCFK*LVTIFQ
Trigger: CTGAAAAATAGTCACAAGGCACTTAAAGCATTGTTG...TCTAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGGAGATTTCTAGTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR GCA 90 bp CTAGAAATCTCCTCACTTCCCGCATTGGGCTTTGTCCCATCTACTAGATATCTACAACAATGCTTTAAGTaGCTTGTGACTATTTTTCAG +
Preference number: 2 (lower is better)
Translates to: LEISSLPALGFVPSTRYLQQCFK*LVTIFQ
Trigger: CTGAAAAATAGTCACAAGGCACTTAAAGCATTGTTG...TAGATATCTAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGGAGATTTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR CCA 72 bp GCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGG +
Preference number: 3 (lower is better)
Translates to: AAPAKAPTGCRR*AMSIPVAFVGR
Trigger: CCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR CCA 72 bp ATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGC +
Preference number: 3 (lower is better)
Translates to: IWTSSRTSQGAH*VSEVGDVNPRG
Trigger: GCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CAA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGACGTTTAAAGGCGGGGTaGGGCGGGACAGCGCCCTTG +
Preference number: 3 (lower is better)
Translates to: KGGVGRDSALACIRHRFGRLKAG*GGTAPL
Trigger: CAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACG...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR CCA 72 bp CCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGA +
Preference number: 3 (lower is better)
Translates to: PLGVGGGRCQSP*PSSGGWSWPKR
Trigger: TCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CAA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCGTTTAAAGGCGGGGTaGGGCGGGACAGCGCCCTTG +
Preference number: 3 (lower is better)
Translates to: FVAFKGGVGRDSALACIRRLKAG*GGTAPL
Trigger: CAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACG...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR CCA 72 bp GGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTC +
Preference number: 3 (lower is better)
Translates to: GRCQSPWPSSGG*SWPKRERYSSV
Trigger: GACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR-3UTR CAA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCGGCGGGACAGCGCCCTaGCGTGTATTAGGCACAGGT +
Preference number: 3 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFGGTAP*RVLGTG
Trigger: ACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR-3UTR CAA 90 bp GGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAATTTTCTCAGATCCCTaGAGACTGGGCAATCAGGGT +
Preference number: 3 (lower is better)
Translates to: GGGRCQSPWPSSGGWSWPIFSDP*RLGNQG
Trigger: ACCCTGATTGCCCAGTCTCAAGGGATCTGAGAAAAT...TGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR GCA 72 bp CTTGAGACTGGGCAATCAGGGTCACCGGGGTGCAAGTaGTCATGGAAGGCTGCCCCAGCACAACAGGGTGAT +
Preference number: 3 (lower is better)
Translates to: LETGQSGSPGCK*SWKAAPAQQGD
Trigger: ATCACCCTGTTGTGCTGGGGCAGCCTTCCATGAGCACTTGCACCCCGGTGACCCTGATTGCCCAGTCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR GCA 72 bp AGATCCCTTGAGACTGGGCAATCAGGGTCACCGGGGTaGAAGTGCTCATGGAAGGCTGCCCCAGCACAACAG +
Preference number: 3 (lower is better)
Translates to: RSLETGQSGSPG*KCSWKAAPAQQ
Trigger: CTGTTGTGCTGGGGCAGCCTTCCATGAGCACTTGCACCCCGGTGACCCTGATTGCCCAGTCTCAAGGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR CCA 72 bp TGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: CQSPWPSSGGWS*PKRERYSSVLA
Trigger: TGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR CCA 72 bp TTGAGGAAGGATCTCCGGTTCCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGGCTCAGGTTTGCCAAG +
Preference number: 3 (lower is better)
Translates to: LRKDLRFPWQTL*DRLSCWLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATCCTTCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR-3UTR CAA 90 bp AGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTGGCGGGACAGCGCCCTaGCGTGTATTAGGCACAGGT +
Preference number: 3 (lower is better)
Translates to: RVELAKKRAVQFCPGIIIGGTAP*RVLGTG
Trigger: ACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC...AATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
3UTR TCA 72 bp CAAGTGCTCATGGAAGGCTGCCCCAGCACAACAGGGTaGTCCTCGGGAAGAATATGCCCTTGCCAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: QVLMEGCPSTTG*SSGRICPCQRL
Trigger: CAGCCTTTGGCAAGGGCATATTCTTCCCGAGGATCACCCTGTTGTGCTGGGGCAGCCTTCCATGAGCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR GCA 72 bp CGGTTCCCCTGGCAAACTCTCTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAGAACTCGATAGACAGA +
Preference number: 3 (lower is better)
Translates to: RFPWQTLWDRLS*WLRFAKNSIDR
Trigger: TCTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGGGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR CCA 72 bp TTCCCCTGGCAAACTCTCTGGGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAACTCGATAGACAGAGCG +
Preference number: 3 (lower is better)
Translates to: FPWQTLWDRLSC*LRFAKNSIDRA
Trigger: CGCTCTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR-3UTR CAA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGCGAAGTAATCTCTCTTaGTCCATCAGAATATGGTCG +
Preference number: 3 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWRSNLS*SIRIWS
Trigger: CGACCATATTCTGATGGACAAAGAGAGATTACTTCG...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR GCA 72 bp TGCCCTTGCCAAAGGCTGGAAATTGGAGCTCCCCACTaGAGTGGTCTCTGCAATTCCAACACCAAGTTGGTG +
Preference number: 3 (lower is better)
Translates to: CPCQRLEIGAPH*SGLCNSNTKLV
Trigger: CACCAACTTGGTGTTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR GCA 72 bp GCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTCCTCCATCTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: AVPVDCKVGKAL*HEAGIVLHLQL
Trigger: AAGCTGGAGATGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613840.1
ENST00000632039.1
ENST00000680579.1
3UTR CCA 72 bp TTGCCAAAGGCTGGAAATTGGAGCTCCCCACTGCAGTaGTCTCTGCAATTCCAACACCAAGTTGGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: LPKAGNWSSPLQ*SLQFQHQVGAA
Trigger: TGCTGCACCAACTTGGTGTTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR CCA 72 bp CTCGGGAAGAATATGCCCTTGCCAAAGGCTGGAAATTaGAGCTCCCCACTGCAGTGGTCTCTGCAATTCCAA +
Preference number: 3 (lower is better)
Translates to: LGKNMPLPKAGN*SSPLQWSLQFQ
Trigger: TTGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CAA 90 bp AACAATGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCAACAATGCTCTTTATTaGTGGCGTTTAAAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: NNALYLWRLKAGLGGTAPNNALY*WRLKAG
Trigger: CCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTT...GGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679997.1
ENST00000680340.1
3UTR-3UTR CAA 90 bp GGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCACGAAGTTTCCTGCCTTaGCTGGCTTTCCTATCTACT +
Preference number: 3 (lower is better)
Translates to: GGAGQKESGTVLSWHHHSRSFLP*LAFLST
Trigger: AGTAGATAGGAAAGCCAGCAAAGGCAGGAAACTTCG...TGAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
3UTR TCA 72 bp GATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTCGTTCCAGCCATACAAAA +
Preference number: 3 (lower is better)
Translates to: DRWDPRSWSSVL*VLEGARSSHTK
Trigger: TTTTGTATGGCTGGAACGAGCTCCTTCGAGAACTCATAGAACGGAAGACCAGCTCCTTGGATCCCAACGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CAA 90 bp CCATTTCTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCTTCCCGCATTGGGCTTaGTCCCATCTACTAGATATC +
Preference number: 3 (lower is better)
Translates to: PFLKCAVPVDCKVGKALCFPHWA*SHLLDI
Trigger: GATATCTAGTAGATGGGACAAAGCCCAATGCGGGAA...GCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR TCA 72 bp GATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGTGGTAAAAGTCATCAT +
Preference number: 3 (lower is better)
Translates to: DRWDPRSWSSVL*VLEGAGGKSHH
Trigger: ATGATGACTTTTACCACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCAGCTCCTTGGATCCCAACGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR CCA 72 bp GCTCAGGTTTGCCAAGAACTCGATAGACAGAGCGCTTaGTCTGTGTCCTTCGAAGTAATCTCTCTTTGTCCA +
Preference number: 3 (lower is better)
Translates to: AQVCQELDRQSA*SVSFEVISLCP
Trigger: TGGACAAAGAGAGATTACTTCGAAGGACACAGACCAAGCGCTCTGTCTATCGAGTTCTTGGCAAACCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR-3UTR CAA 90 bp TTTCTCAGATCCCTTGAGACTGGGCAATCAGGGTCACCGGGGTGCAAGTGCTCATGGAAGATTGTTTTATaGGTCTATCTAGCTAGGTCT +
Preference number: 3 (lower is better)
Translates to: FLRSLETGQSGSPGCKCSWKIVL*VYLARS
Trigger: AGACCTAGCTAGATAGACCAATAAAACAATCTTCCA...TGAGCACTTGCACCCCGGTGACCCTGATTGCCCAGTCTCAAGGGATCTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR-3UTR CAA 90 bp TTTCTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCCATAATTCTGGGCCACCTTaGTCCTTGAACAATGGGAAA +
Preference number: 3 (lower is better)
Translates to: FLKCAVPVDCKVGKALCHNSGPP*SLNNGK
Trigger: TTTCCCATTGTTCAAGGACAAAGGTGGCCCAGAATT...ATGGCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR-3UTR CAA 90 bp TGTCTGGGTACTGGAAAAGCAACTCTTCCTGAAGACCTACCAATGACCTCAACAAATTCTGGGCCACCTTaGTCCTTGAACAATGGGAAA +
Preference number: 3 (lower is better)
Translates to: CLGTGKATLPEDLPMTSTNSGPP*SLNNGK
Trigger: TTTCCCATTGTTCAAGGACAAAGGTGGCCCAGAATT...TGTTGAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTTCCAGTACCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR TCA 72 bp TTTGTCCATCAGAATATGGTCGATCTGAGTCAAGATTaGGCGTTCAAAGGCACCAAAACCCTTCCCCAGTTT +
Preference number: 3 (lower is better)
Translates to: FVHQNMVDLSQD*AFKGTKTLPQF
Trigger: AAACTGGGGAAGGGTTTTGGTGCCTTTGAACGCTCAATCTTGACTCAGATCGACCATATTCTGATGGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR CCA 72 bp CCCACTGCAGTGGTCTCTGCAATTCCAACACCAAGTTaGTGCAGCATTTACTTTCAAACACTTTGTGTACTA +
Preference number: 3 (lower is better)
Translates to: PTAVVSAIPTPS*CSIYFQTLCVL
Trigger: TAGTACACAAAGTGTTTGAAAGTAAATGCTGCACCAACTTGGTGTTGGAATTGCAGAGACCACTGCAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680330.1
3UTR TCA 72 bp AGTAATCTCTCTTTGTCCATCAGAATATGGTCGATCTaGGTCAAGATTGAGCGTTCAAAGGCACCAAAACCC +
Preference number: 3 (lower is better)
Translates to: SNLSLSIRIWSI*VKIERSKAPKP
Trigger: GGGTTTTGGTGCCTTTGAACGCTCAATCTTGACTCAGATCGACCATATTCTGATGGACAAAGAGAGATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
3UTR TCA 72 bp GTACTGGAAAAGCAACTCTTCCTGAAGACCTACCAATaGCCTCAACAATGCTTTAAGTGCCTTGTGACTATT +
Preference number: 3 (lower is better)
Translates to: VLEKQLFLKTYQ*PQQCFKCLVTI
Trigger: AATAGTCACAAGGCACTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTTCCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR TCA 72 bp TATCTAGTGTCTGGGTACTGGAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTCAACAATGCTTTAAGT +
Preference number: 3 (lower is better)
Translates to: YLVSGYWKSNSS*RPTNDLNNALS
Trigger: ACTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTTCCAGTACCCAGACACTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
3UTR CCA 72 bp TACAGTTCTGTCCTGGCATCATCATTCATTGTAGTATaGTCAATAGGTGCCATGAAACTCAGTAGCTTGCTA +
Preference number: 3 (lower is better)
Translates to: YSSVLASSFIVV*SIGAMKLSSLL
Trigger: TAGCAAGCTACTGAGTTTCATGGCACCTATTGACCATACTACAATGAATGATGATGCCAGGACAGAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCGCCACCCCACAGCTCTaGACCGGCCACTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERATPQL*TGHFRE
Trigger: CTCCCGGAAGTGGCCGGTCCAGAGCTGTGGGGTGGC...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp CCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGCGGATCCTCTCGCCTTaGTCCGATTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: PTGCRRWAMSIPVAFVGRRILSP*SDSPTP
Trigger: CGGAGTCGGGGAATCGGATCAAGGCGAGAGGATCCG...CCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGCAGCTCCTCTCGGCCTaGGCCCTCGATCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSQLLSA*ALDLFR
Trigger: GCGGAACAGATCGAGGGCTCAGGCCGAGAGGAGCTG...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCCGGATCCTCTCGCCTTaGTCCGATTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: GFLHLDQQPHQPRRPLGVRILSP*SDSPTP
Trigger: CGGAGTCGGGGAATCGGATCAAGGCGAGAGGATCCG...GACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTAACAACTGTTCCAGTTaGAGCGCCAGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGNNCSS*SARGCG
Trigger: GCCGCAGCCCCTGGCGCTGCAACTGGAACAGTTGTT...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp TCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGAACAACTGTTCCAGTTaGAGCGCCAGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SIWTSSRTSQGAHWVSEVNNCSS*SARGCG
Trigger: GCCGCAGCCCCTGGCGCTGCAACTGGAACAGTTGTT...CACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCACCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGRCQSPWPSSGGWSWPPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...TGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGGCCACCCCACAGCTCTaGACCGGCCACTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRATPQL*TGHFRE
Trigger: CTCCCGGAAGTGGCCGGTCCAGAGCTGTGGGGTGGC...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACGCCACCCCACAGCTCTaGACCGGCCACTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHATPQL*TGHFRE
Trigger: CTCCCGGAAGTGGCCGGTCCAGAGCTGTGGGGTGGC...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCTCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RPLGVGGGRCQSPWPSSGTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...TCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp ACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: TGFLHLDQQPHQPRRPLGSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...ACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GCRRWAMSIPVAFVGRVELVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...CTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp CGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGACTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RPLGVGGGRCQSPWPSSGLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...TCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGTCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PLGVGGGRCQSPWPSSGGTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...CCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGACCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RPLGVGGGRCQSPWPSSGPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...TCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGACTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: WVSEVGDVNPRGLRREGGLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...TCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACGAGGCGACGTTCCTCTaGGCCAAGCGAAGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHEATFL*AKRRSA
Trigger: TGCGCTCCTTCGCTTGGCGCAGAGGAACGTCGCCTC...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAACCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RWAMSIPVAFVGRVELAKPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...TTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SIWTSSRTSQGAHWVSEVWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...CACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCGCCACCCCACAGCTCTaGACCGGCCACTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGATPQL*TGHFRE
Trigger: CTCCCGGAAGTGGCCGGTCCAGAGCTGTGGGGTGGC...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGCCACCCCACAGCTCTaGACCGGCCACTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSAATPQL*TGHFRE
Trigger: CTCCCGGAAGTGGCCGGTCCAGAGCTGTGGGGTGGC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GFLHLDQQPHQPRRPLGVTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...GACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GLRREGGAGQKESGTVLSSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...GGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSISQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCGGATCCTCTCGCCTTaGTCCGATTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPRILSP*SDSPTP
Trigger: CGGAGTCGGGGAATCGGATCAAGGCGAGAGGATCCG...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SEVGDVNPRGLRREGGAGQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...GCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp CCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCCAGCTCCTCTCGGCCTaGGCCCTCGATCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: PIKSLVSSIWTSSRTSQGQLLSA*ALDLFR
Trigger: GCGGAACAGATCGAGGGCTCAGGCCGAGAGGAGCTG...GCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCAGCTCCTCTCGGCCTaGGCCCTCGATCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFQLLSA*ALDLFR
Trigger: GCGGAACAGATCGAGGGCTCAGGCCGAGAGGAGCTG...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAAACAACTGTTCCAGTTaGAGCGCCAGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GRCQSPWPSSGGWSWPKRNNCSS*SARGCG
Trigger: GCCGCAGCCCCTGGCGCTGCAACTGGAACAGTTGTT...TCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: VGGGRCQSPWPSSGGWSWLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...CCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp CCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: PLGVGGGRCQSPWPSSGGLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...CCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: GGGRCQSPWPSSGGWSWPVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...TGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: GCRRWAMSIPVAFVGRVEVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...CTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp CGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCTCCTCGGGAAGAATATaGCCTTGCCAAAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RRWAMSIPVAFVGRVELASSGRI*PCQRLE
Trigger: TTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGA...GGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR CCA 90 bp AGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RWAMSIPVAFVGRVELAKDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...TTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GVGRDSALACIRHRFGTQATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...CTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAAGGGTCCGCCTCGCTTaGTCGCGGGTTCAACAACTG +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGRVRLA*SRVQQL
Trigger: CAGTTGTTGAACCCGCGACCAAGCGAGGCGGACCCT...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: PTGCRRWAMSIPVAFVGRLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...CCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GVGRDSALACIRHRFGTQPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...CTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAAACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: KAGLGGTAPLRVLGTGSETGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...TTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: PIKSLVSSIWTSSRTSQGSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...GCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGACTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GRCQSPWPSSGGWSWPKRLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...TCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGACTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCGGGCGTTGCTAGCATaGAGGCGGAAGCGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSARALLA*RRKRAE
Trigger: TTCTGCGCGCTTCCGCCTTCATGCTAGCAACGCCCG...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620004.2
CDS-3UTR TCA 90 bp CCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCCGGATCCTCTCGCCTTaGTCCGATTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: PIKSLVSSIWTSSRTSQGRILSP*SDSPTP
Trigger: CGGAGTCGGGGAATCGGATCAAGGCGAGAGGATCCG...GCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCGGATCCTCTCGCCTTaGTCCGATTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: FVAFKGGVGRDSALACIRRILSP*SDSPTP
Trigger: CGGAGTCGGGGAATCGGATCAAGGCGAGAGGATCCG...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp GGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: GGGRCQSPWPSSGGWSWPVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...TGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCCAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GFLHLDQQPHQPRRPLGVQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...GACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGAGTTTCGAGTGCGTGTaGAAAGAAGCCGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSSFECV*KEAEAL
Trigger: GAGGGCTTCGGCTTCTTTTCACACGCACTCGAAACT...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAATGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KAGLGGTAPLRVLGTGSEWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...TTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCAAACAACTGTTCCAGTTaGAGCGCCAGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPNNCSS*SARGCG
Trigger: GCCGCAGCCCCTGGCGCTGCAACTGGAACAGTTGTT...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCCTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp ACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGAGCTGGTCCCACAGTaGTATCTGGTTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: TGFLHLDQQPHQPRRPLGELVPQ*YLVLHG
Trigger: GCCGTGAAGAACCAGATAGCACTGTGGGACCAGCTC...ACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: SIWTSSRTSQGAHWVSEVGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...CACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RWAMSIPVAFVGRVELAKDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...TTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VTGFLHLDQQPHQPRRPLWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...CAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCTCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSASPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: GFLHLDQQPHQPRRPLGVLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...GACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGTCCCACAGTGCTATCTaGTTCTTCACGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GCRRWAMSIPVAFVGRVESHSAI*FFTALP
Trigger: AGGAAGAGCCGTGAAGAACCAGATAGCACTGTGGGA...CTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGCTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCCTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: GFLHLDQQPHQPRRPLGVLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...GACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KAGLGGTAPLRVLGTGSEPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...TTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSITGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTCACCCTGGCAGCAGTaGCTGTCGGGGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGSPWQQ*LSGERE
Trigger: TTCCCTCTCCCCCGACAGCCACTGCTGCCAGGGTGA...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
3UTR CAA 72 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTaGCGTGTATTAGGCACAGGTTCGGAACGCAGCATC +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAP*RVLGTGSERSI
Trigger: GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGCAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAGGCCACCTTTGTCCTTaGACAATGGGAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: GGGRCQSPWPSSGGWSWPGHLCP*TMGKHL
Trigger: CAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCC...TGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp TGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGACTGCTGGCTCAGGTTTaGCAAGAACTCGATAGACAG +
Preference number: 4 (lower is better)
Translates to: WVSEVGDVNPRGLRREGGLLAQV*QELDRQ
Trigger: CTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAG...TCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAACAACTGTTCCAGTTaGAGCGCCAGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSNNCSS*SARGCG
Trigger: GCCGCAGCCCCTGGCGCTGCAACTGGAACAGTTGTT...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: GFLHLDQQPHQPRRPLGVDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...GACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp CAAGGCGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: QGAHWVSEVGDVNPRGLRDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...ACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGGAAGCCCGGTGTTTTTaGAGAGTGGCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTEARCF*RVASAL
Trigger: AAGAGCAGAAGCCACTCTGCAAAAACACCGGGCTTC...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp CAAGGCGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTGAAGCCCGGTGTTTTTaGAGAGTGGCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: QGAHWVSEVGDVNPRGLREARCF*RVASAL
Trigger: AAGAGCAGAAGCCACTCTGCAAAAACACCGGGCTTC...ACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGCTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: VTGFLHLDQQPHQPRRPLLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...CAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGAGGCGACGTTCCTCTaGGCCAAGCGAAGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: GTAPLRVLGTGSERSIFPEATFL*AKRRSA
Trigger: TGCGCTCCTTCGCTTGGCGCAGAGGAACGTCGCCTC...TGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGATAGACAGAGCGCTTaGTCTGTGTCCTTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGDRQSA*SVSFEV
Trigger: TACTTCGAAGGACACAGACCAAGCGCTCTGTCTATC...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PIKSLVSSIWTSSRTSQGPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...GCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQATAFPWPPDRWDPRSWPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...CCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAATGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KAGLGGTAPLRVLGTGSEWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...TTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCCACCCCACAGCTCTaGACCGGCCACTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RVLGTGSERSIFPGASLLATPQL*TGHFRE
Trigger: CTCCCGGAAGTGGCCGGTCCAGAGCTGTGGGGTGGC...TAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGAGGGTCCGCCTCGCTTaGTCGCGGGTTCAACAACTG +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRRVRLA*SRVQQL
Trigger: CAGTTGTTGAACCCGCGACCAAGCGAGGCGGACCCT...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCATCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GTAPLRVLGTGSERSIFPSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...TGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp ACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTTCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TAFPWPPDRWDPRSWSSVSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...AACGGAAGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCTCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGCTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGCCTCACTTCCCGCATTaGGCTTTGTCCCATCTACTA +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSPHFPH*ALSHLL
Trigger: TAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGG...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: ACIRHRFGTQHLSRGFPTSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...AGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: FKGGVGRDSALACIRHRFLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...GAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTACCTGTCAATCACCCTaGCAGCAGTGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFTCQSP*QQWLSG
Trigger: CCCCGACAGCCACTGCTGCCAGGGTGATTGACAGGT...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR TCA 90 bp TGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: CSLFVAFKGGVGRDSALALPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...CGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTCGGATCCTCTCGCCTTaGTCCGATTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: ACIRHRFGTQHLSRGFPTRILSP*SDSPTP
Trigger: CGGAGTCGGGGAATCGGATCAAGGCGAGAGGATCCG...AGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTACGGATCCTCTCGCCTTaGTCCGATTCCCCGACTCCG +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLRILSP*SDSPTP
Trigger: CGGAGTCGGGGAATCGGATCAAGGCGAGAGGATCCG...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCCAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp AAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAAGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: KAGLGGTAPLRVLGTGSEGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...TTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: SIWTSSRTSQGAHWVSEVKSNSS*RPTNDL
Trigger: GAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTT...CACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: GGGRCQSPWPSSGGWSWPKSNSS*RPTNDL
Trigger: GAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTT...TGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
CDS-3UTR TCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACCAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp ACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: TGFLHLDQQPHQPRRPLGWSSVL*VLEGAR
Trigger: ACGAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...ACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR GCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp ACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGAAGCCCGGTGTTTTTaGAGAGTGGCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TGFLHLDQQPHQPRRPLGEARCF*RVASAL
Trigger: AAGAGCAGAAGCCACTCTGCAAAAACACCGGGCTTC...ACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGACTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTGFLHLDQQPHQPRRPLHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...CAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCGAGCTGGTCCCACAGTaGTATCTGGTTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPELVPQ*YLVLHG
Trigger: GCCGTGAAGAACCAGATAGCACTGTGGGACCAGCTC...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGACTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp CGCCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGAAACCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: RPLGVGGGRCQSPWPSSGETEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGTTTC...TCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGAAACCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGETEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGTTTC...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCGATAGACAGAGCGCTTaGTCTGTGTCCTTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERDRQSA*SVSFEV
Trigger: TACTTCGAAGGACACAGACCAAGCGCTCTGTCTATC...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSADLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACCTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCGGCACTGGAAAATTCTaGGCCACCTTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERGTGKF*ATFVLE
Trigger: TTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGCCTCACTTCCCGCATTaGGCTTTGTCCCATCTACTA +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWPHFPH*ALSHLL
Trigger: TAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGG...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CAGCCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCATCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: QPHKVTGFLHLDQQPHQPSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...TGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTACGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGTAACAATGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GNNALYLWRLKAGLGGTASQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...CGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679997.1
ENST00000680340.1
CDS-3UTR CCA 90 bp CGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: RVLGTGSERSIFPGASLLSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...TAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TGSERSIFPGASLLAQPHLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCAGCAAGCCACTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPASHFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGTGGCTTGC...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680356.1
CDS-3UTR CCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCACCTGTCAATCACCCTaGCAGCAGTGGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSITCQSP*QQWQKG
Trigger: CCCTTTCTGCCACTGCTGCCAGGGTGATTGACAGGT...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681062.1
CDS-3UTR CCA 90 bp GGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAATCACCCTGGCAGCAGTaGCTGTCGGGGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSERSIFPGASLLAQPHKSPWQQ*LSGERE
Trigger: TTCCCTCTCCCCCGACAGCCACTGCTGCCAGGGTGA...TTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR CCA 90 bp TTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGGTGCAAGTGCTCATaGAAGGCTGCCCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: FKGGVGRDSALACIRHRFGCKCS*KAAPAQ
Trigger: TTGTGCTGGGGCAGCCTTCCATGAGCACTTGCACCC...GAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR TCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHWSSVL*VLEGAG
Trigger: ACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGATGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGWSSVL*VLEGAG
Trigger: ACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GATTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: DCKPLPSHGHLIVGIQGALPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...AGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR TCA 90 bp ACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TAPLRVLGTGSERSIFPGLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...CCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: WAMSIPVAFVGRVELAKKVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...CTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAGAGCTTTTTGTAGTTTaGTCCTTCCTTCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GGGRCQSPWPSSGGWSWPELFVV*SFLPRA
Trigger: AGCTCTTGGAAGGAAGGATCAAACTACAAAAAGCTC...TGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp CCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGCTGAAGACCTACCAATaGCCTCAACAATGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PLGVGGGRCQSPWPSSGGLKTYQ*PQQCFK
Trigger: CTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAG...CCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
CDS-3UTR TCA 90 bp ATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGCAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MSIPVAFVGRVELAKKRAQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...CGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACACAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp ACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGTGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAPLRVLGTGSERSIFPGWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...CCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTGGAAGTTTCCTGCCTTTaGTGGCTTTCCTATCTACTT +
Preference number: 4 (lower is better)
Translates to: SIWTSSRTSQGAHWVSEVEVSCL*WLSYLL
Trigger: AAGTAGATAGGAAAGCCAGCAAAGGCAGGAAACTTC...CACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGGAAGTTTCCTGCCTTTaGTGGCTTTCCTATCTACTT +
Preference number: 4 (lower is better)
Translates to: GCRRWAMSIPVAFVGRVEEVSCL*WLSYLL
Trigger: AAGTAGATAGGAAAGCCAGCAAAGGCAGGAAACTTC...CTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACGAAGCCCGGTGTTTTTaGAGAGTGGCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHEARCF*RVASAL
Trigger: AAGAGCAGAAGCCACTCTGCAAAAACACCGGGCTTC...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGAGCTGGTCCCACAGTaGTATCTGGTTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSAELVPQ*YLVLHG
Trigger: GCCGTGAAGAACCAGATAGCACTGTGGGACCAGCTC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTGAGCTGGTCCCACAGTaGTATCTGGTTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFELVPQ*YLVLHG
Trigger: GCCGTGAAGAACCAGATAGCACTGTGGGACCAGCTC...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: SHWFPPSGPAAAPAKAPTGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...AGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSILQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAAACCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: VSSIWTSSRTSQGAHWVSETEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGTTTC...CGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGATAGACAGAGCGCTTaGTCTGTGTCCTTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: TGFLHLDQQPHQPRRPLGDRQSA*SVSFEV
Trigger: TACTTCGAAGGACACAGACCAAGCGCTCTGTCTATC...ACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSADRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FVAFKGGVGRDSALACIRDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LQATAFPWPPDRWDPRSWDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...CCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FVAFKGGVGRDSALACIRWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: TGSERSIFPGASLLAQPHATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGTTGCTTCGTAACTTCTaGATTGCAAGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTLLRNF*IASHCL
Trigger: AAGGCAGTGGCTTGCAATCCAGAAGTTACGAAGCAA...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCTTGCTTCGTAACTTCTaGATTGCAAGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERLLRNF*IASHCL
Trigger: AAGGCAGTGGCTTGCAATCCAGAAGTTACGAAGCAA...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGTTGCTTCGTAACTTCTaGATTGCAAGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRLLRNF*IASHCL
Trigger: AAGGCAGTGGCTTGCAATCCAGAAGTTACGAAGCAA...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGAGGGTCCGCCTCGCTTaGTCGCGGGTTCAACAACTG +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQRVRLA*SRVQQL
Trigger: CAGTTGTTGAACCCGCGACCAAGCGAGGCGGACCCT...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp AACAATGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCAGGGTCCGCCTCGCTTaGTCGCGGGTTCAACAACTG +
Preference number: 4 (lower is better)
Translates to: NNALYLWRLKAGLGGTAPRVRLA*SRVQQL
Trigger: CAGTTGTTGAACCCGCGACCAAGCGAGGCGGACCCT...GGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680340.1
CDS-3UTR CCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTATCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GATTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: DCKPLPSHGHLIVGIQGATCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...AGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGAGGTAGAGTCTGCTCCCAATaGTCTTCATTCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: LHLDQQPHQPRRPLGVGGRVCSQ*SSFHAF
Trigger: AAAAGCATGGAATGAAGACCATTGGGAGCAGACTCT...ACCTCCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VTGFLHLDQQPHQPRRPLGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...CAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GVGRDSALACIRHRFGTQGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...CTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACTCCCACAGTGCTATCTaGTTCTTCACGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHSHSAI*FFTALP
Trigger: AGGAAGAGCCGTGAAGAACCAGATAGCACTGTGGGA...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGGAGGAAGCTGGTTGGTaGTCAACAGAGCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTEEAGW*STELFV
Trigger: TACAAAAAGCTCTGTTGACCACCAACCAGCTTCCTC...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGGTTGAGGAAGCTGGTTaGTGGTCAACAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTVEEAG*WSTELF
Trigger: AAAAAGCTCTGTTGACCACCAACCAGCTTCCTCAAC...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCGTTGAGGAAGCTGGTTaGTGGTCAACAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: AGLGGTAPLRVLGTGSERVEEAG*WSTELF
Trigger: AAAAAGCTCTGTTGACCACCAACCAGCTTCCTCAAC...GCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCGGGTTGAGGAAGCTGGTTaGTGGTCAACAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FPPSGPAAAPAKAPTGCRVEEAG*WSTELF
Trigger: AAAAAGCTCTGTTGACCACCAACCAGCTTCCTCAAC...CCGACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTCCTCACTTCCCGCATTaGGCTTTGTCCCATCTACTA +
Preference number: 4 (lower is better)
Translates to: SHWFPPSGPAAAPAKAPTPHFPH*ALSHLL
Trigger: TAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGG...AGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TAPLRVLGTGSERSIFPGSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...CCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TGSERSIFPGASLLAQPHSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCTCAGCCAAGGCGCCCACTaGGTGTCGGAGGTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: IFPGASLLAQPHKVTGFLSQGAH*VSEVGD
Trigger: ATCGCCCACCTCCGACACCCAGTGGGCGCCTTGGCT...GAGGAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAACTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GSERSIFPGASLLAQPHKLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...TTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACCTGTCAATCACCCTaGCAGCAGTGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVTCQSP*QQWLSG
Trigger: CCCCGACAGCCACTGCTGCCAGGGTGATTGACAGGT...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR TCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSIVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGCAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp ACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGCAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: TAPLRVLGTGSERSIFPGQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...CCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGTCCTGAAGACCTACCAATaGCCTCAACAATGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GFLHLDQQPHQPRRPLGVLKTYQ*PQQCFK
Trigger: CTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAG...GACACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FVAFKGGVGRDSALACIRQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCCAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTATGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCAGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCCTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCCTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: FKGGVGRDSALACIRHRFLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...GAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSIHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACACATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCGAGCTGGTCCCACAGTaGTATCTGGTTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFELVPQ*YLVLHG
Trigger: GCCGTGAAGAACCAGATAGCACTGTGGGACCAGCTC...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSIGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCAGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: FKGGVGRDSALACIRHRFLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...GAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp ACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTGAAACCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: TGFLHLDQQPHQPRRPLGETEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGTTTC...ACCCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACCTGTCCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHLSEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGACAG...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000632435.1
ENST00000680340.1
ENST00000680782.1
CDS-3UTR GCA 90 bp ATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCTCGAGGCGACGTTCCTCTaGGCCAAGCGAAGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: IFPGASLLAQPHKVTGFLEATFL*AKRRSA
Trigger: TGCGCTCCTTCGCTTGGCGCAGAGGAACGTCGCCTC...GAGGAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCTCAGGGTCACCGGGGTaGAAGTGCTCATGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVSGSPG*KCSWKA
Trigger: AGCCTTCCATGAGCACTTGCACCCCGGTGACCCTGA...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR CCA 90 bp CGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTACCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVLGTGSERSIFPGASLLPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...TAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ATCCAAGGAGCTGGTCTTCCGTTCTATGAGTTCTCGAAGGAGCTCGTTCCAGCCCCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IQGAGLPFYEFSKELVPAPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...GGCTGGAACGAGCTCCTTCGAGAACTCATAGAACGGAAGACCAGCTCCTTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR CCA 90 bp ATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCACCCTGGCAAACTCTCTaGGACAGGCTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IRHRFGTQHLSRGFPTSSPWQTL*DRLSCW
Trigger: CCAGCAGCTCAGCCTGTCCCAGAGAGTTTGCCAGGG...TGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ACIRHRFGTQHLSRGFPTDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...AGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AACAATGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: NNALYLWRLKAGLGGTAPATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...GGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679997.1
ENST00000680340.1
CDS-3UTR CCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCGTTTCCTGCCTTTGCTaGCTTTCCTATCTACTTTTT +
Preference number: 4 (lower is better)
Translates to: SEVGDVNPRGLRREGGAGVSCLC*LSYLLF
Trigger: AAAAAGTAGATAGGAAAGCCAGCAAAGGCAGGAAAC...GCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTAAGGGTCCGCCTCGCTTaGTCGCGGGTTCAACAACTG +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLRVRLA*SRVQQL
Trigger: CAGTTGTTGAACCCGCGACCAAGCGAGGCGGACCCT...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCCATGAAGCTGGGATATCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: AVPVDCKVGKALCHEAGISPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...TATCCCAGCTTCATGGCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613840.1
ENST00000632039.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAAGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KAGLGGTAPLRVLGTGSEGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...TTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAAGTCACTGATACTCTaGACACTGAAGCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHKSLIL*TLKPGV
Trigger: AACACCGGGCTTCAGTGTCCAGAGTATCAGTGACTT...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTAAGTCACTGATACTCTaGACACTGAAGCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: SHWFPPSGPAAAPAKAPTKSLIL*TLKPGV
Trigger: AACACCGGGCTTCAGTGTCCAGAGTATCAGTGACTT...AGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAAAGTCACTGATACTCTaGACACTGAAGCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGKSLIL*TLKPGV
Trigger: AACACCGGGCTTCAGTGTCCAGAGTATCAGTGACTT...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: FVAFKGGVGRDSALACIRLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGGTTGAGGAAGCTGGTTaGTGGTCAACAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GVGRDSALACIRHRFGTQVEEAG*WSTELF
Trigger: AAAAAGCTCTGTTGACCACCAACCAGCTTCCTCAAC...CTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGTTGAGGAAGCTGGTTaGTGGTCAACAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWVEEAG*WSTELF
Trigger: AAAAAGCTCTGTTGACCACCAACCAGCTTCCTCAAC...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCACTGGGTGTCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGTTTGTCCTTGAACAATaGGAAAACATCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PTGCRRWAMSIPVAFVGRFVLEQ*ENIWLR
Trigger: CCTCAACCAGATGTTTTCCCATTGTTCAAGGACAAA...CCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGACACCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCCCTCACTTCCCGCATTaGGCTTTGTCCCATCTACTA +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSIPHFPH*ALSHLL
Trigger: TAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGG...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AACAATGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: NNALYLWRLKAGLGGTAPSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...GGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679997.1
ENST00000680340.1
CDS-3UTR CCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTACCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SIFPGASLLAQPHKVTGFRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...GAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RVELAKKRAVQFCPGIIIRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...AATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp ATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCTCCGATGTCAATCCCCGTaGCCTTCGTCGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: IFPGASLLAQPHKVTGFLRCQSP*PSSGGW
Trigger: CCACCCTCCCGACGAAGGCCACGGGGATTGACATCG...GAGGAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTAACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGTAACAATGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GNNALYLWRLKAGLGGTALVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...CGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCATTGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679997.1
ENST00000680340.1
CDS-3UTR CCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTGGTTTCCTCCATCTaGACCAGCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLLVSSI*TSSRTS
Trigger: GCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAG...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCATCACCCTGGCAGCAGTaGCAGAAAGGGCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: GTAPLRVLGTGSERSIFPSPWQQ*QKGHPQ
Trigger: TTGAGGATGCCCTTTCTGCCACTGCTGCCAGGGTGA...TGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681062.1
CDS-3UTR TCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSAWSSVL*VLEGAG
Trigger: ACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSWSSVL*VLEGAG
Trigger: ACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp CGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTACTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RVLGTGSERSIFPGASLLLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...TAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: FKGGVGRDSALACIRHRFVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...GAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCGGCCACCTTTGTCCTTaGACAATGGGAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSIGHLCP*TMGKHL
Trigger: CAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCC...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGCCACCTTTGTCCTTaGACAATGGGAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTGHLCP*TMGKHL
Trigger: CAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCC...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCTGAAGACCTACCAATaGCCTCAACAATGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GVGRDSALACIRHRFGTQLKTYQ*PQQCFK
Trigger: CTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAG...CTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSKSNSS*RPTNDL
Trigger: GAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTT...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
CDS-3UTR TCA 90 bp GGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCACAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GTAPLRVLGTGSERSIFPQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...TGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACATCAGTCGTCAGCCACTaGACAAGTGTCTTGAGACTT +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTSVVSH*TSVLRL
Trigger: AAGTCTCAAGACACTTGTTCAGTGGCTGACGACTGA...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR TCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCAGCACAACAGGGTaGTCCTCGGGAAGAATATGC +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQPSTTG*SSGRIC
Trigger: GCATATTCTTCCCGAGGATCACCCTGTTGTGCTGGG...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR GCA 90 bp CGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTATGGGACAGGCTGAGCTaGTGGCTCAGGTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RVLGTGSERSIFPGASLLWDRLS*WLRFAK
Trigger: CTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTCCCA...TAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGGAAGTTTCCTGCCTTTaGTGGCTTTCCTATCTACTT +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWEVSCL*WLSYLL
Trigger: AAGTAGATAGGAAAGCCAGCAAAGGCAGGAAACTTC...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGGAAGTTTCCTGCCTTTaGTGGCTTTCCTATCTACTT +
Preference number: 4 (lower is better)
Translates to: GVGRDSALACIRHRFGTQEVSCL*WLSYLL
Trigger: AAGTAGATAGGAAAGCCAGCAAAGGCAGGAAACTTC...CTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCCATGAAGCTGGGATAAACAACTGTTCCAGTTaGAGCGCCAGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: AVPVDCKVGKALCHEAGINNCSS*SARGCG
Trigger: GCCGCAGCCCCTGGCGCTGCAACTGGAACAGTTGTT...TATCCCAGCTTCATGGCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613840.1
ENST00000632039.1
ENST00000680579.1
CDS-3UTR GCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGAAGCCCGGTGTTTTTaGAGAGTGGCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSAEARCF*RVASAL
Trigger: AAGAGCAGAAGCCACTCTGCAAAAACACCGGGCTTC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCACTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: GTAPLRVLGTGSERSIFPLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...TGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSLFVAFKGGVGRDSALAHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...CGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp CCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PIKSLVSSIWTSSRTSQGHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...GCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTGAGCTGGTCCCACAGTaGTATCTGGTTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: ACIRHRFGTQHLSRGFPTELVPQ*YLVLHG
Trigger: GCCGTGAAGAACCAGATAGCACTGTGGGACCAGCTC...AGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSAGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: FKGGVGRDSALACIRHRFGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...GAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GATTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: DCKPLPSHGHLIVGIQGAVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...AGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR GCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTCGATCTCCGGTTCCCCTaGCAAACTCTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GWSWPKRERYSSVLASSFDLRFP*QTLWDR
Trigger: CCTGTCCCAGAGAGTTTGCCAGGGGAACCGGAGATC...GAATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCACTGCCTTCCCATaGCCACCTGATCGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: IRHRFGTQHLSRGFPTSSATAFP*PPDRWD
Trigger: ATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGC...TGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTCTCGAAGGAGCTCGTTCCAGCCATACAAAAGATTACAACAACCGTTCCTGGTGCCACCCCACAGCTCTaGACCGGCCACTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: FSKELVPAIQKITTTVPGATPQL*TGHFRE
Trigger: CTCCCGGAAGTGGCCGGTCCAGAGCTGTGGGGTGGC...ACCAGGAACGGTTGTTGTAATCTTTTGTATGGCTGGAACGAGCTCCTTCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR CCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAAAGTCACTGATACTCTaGACACTGAAGCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTKSLIL*TLKPGV
Trigger: AACACCGGGCTTCAGTGTCCAGAGTATCAGTGACTT...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCTCCCACAGTGCTATCTaGTTCTTCACGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RDSALACIRHRFGTQHLSSHSAI*FFTALP
Trigger: AGGAAGAGCCGTGAAGAACCAGATAGCACTGTGGGA...GGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCTCCCACAGTGCTATCTaGTTCTTCACGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PIKSLVSSIWTSSRTSQGSHSAI*FFTALP
Trigger: AGGAAGAGCCGTGAAGAACCAGATAGCACTGTGGGA...GCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTTCCCACAGTGCTATCTaGTTCTTCACGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFSHSAI*FFTALP
Trigger: AGGAAGAGCCGTGAAGAACCAGATAGCACTGTGGGA...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGCTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: TAPLRVLGTGSERSIFPGLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...CCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCGGCACTGGAAAATTCTaGGCCACCTTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSIGTGKF*ATFVLE
Trigger: TTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCCCTCACTTCCCGCATTaGGCTTTGTCCCATCTACTA +
Preference number: 4 (lower is better)
Translates to: PIKSLVSSIWTSSRTSQGPHFPH*ALSHLL
Trigger: TAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGG...GCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ERSIFPGASLLAQPHKVTSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...AGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTCTATGAGTTCCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: HGHLIVGIQGAGLPFYEFPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...GAACTCATAGAACGGAAGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR CCA 90 bp ATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCTCACTGGGTGTCGGAGGTaGGCGATGTCAATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: IFPGASLLAQPHKVTGFLTGCRR*AMSIPV
Trigger: CACGGGGATTGACATCGCCCACCTCCGACACCCAGT...GAGGAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGATTGCTTCGTAACTTCTaGATTGCAAGCCACTTCCCA +
Preference number: 4 (lower is better)
Translates to: GRCQSPWPSSGGWSWPKRLLRNF*IASHFP
Trigger: TGGGAAGTGGCTTGCAATCCAGAAGTTACGAAGCAA...TCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680356.1
3UTR CAA 72 bp CAGCACAACAGGGTGATCCTCGGGAAGAATATGCCCTaGCCAAAGGCTGGAAATTGGAGCTCCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: QHNRVILGKNMP*PKAGNWSSPLQ
Trigger: CTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGGATCACCCTGTTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR TCA 90 bp AAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACAGAATATGGTCGATCTaGGTCAAGATTGAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: KSLVSSIWTSSRTSQGAHRIWSI*VKIERS
Trigger: TGAACGCTCAATCTTGACTCAGATCGACCATATTCT...GTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRWSSVL*VLEGAG
Trigger: ACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp ATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCTCCTTCCCATGGCCACCTaGTCGTTGGGATCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: IFPGASLLAQPHKVTGFLLPMAT*SLGSKE
Trigger: CTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAG...GAGGAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: GTAPLRVLGTGSERSIFPVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...TGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTTCTCAGATCCCTTGAGACTGGGCAATCAGGGTCACCGGGGTGCAAGTGCTCATTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FLRSLETGQSGSPGCKCSFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...TGAGCACTTGCACCCCGGTGACCCTGATTGCCCAGTCTCAAGGGATCTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR TCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTATTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACGAGCTTTTTGTAGTTTaGTCCTTCCTTCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: VAFKGGVGRDSALACIRHELFVV*SFLPRA
Trigger: AGCTCTTGGAAGGAAGGATCAAACTACAAAAAGCTC...GTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGGCCACCTTTGTCCTTaGACAATGGGAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSAGHLCP*TMGKHL
Trigger: CAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCAAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPKSNSS*RPTNDL
Trigger: GAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTT...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCACAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GGWSWPKRERYSSVLASSQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...TGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCAGTTTCGAGTGCGTGTaGAAAGAAGCCGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVSFECV*KEAEAL
Trigger: GAGGGCTTCGGCTTCTTTTCACACGCACTCGAAACT...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGACTGAACAAGTGTCTTaGGACTTCAAGAGACTTAAA +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTTEQVS*DFKRLK
Trigger: TTTAAGTCTCTTGAAGTCTCAAGACACTTGTTCAGT...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR TCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCCTCCCAGCTAGACTCTaGACATCAGCTTACAGAACA +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGLPARL*TSAYRT
Trigger: TGTTCTGTAAGCTGATGTTCAGAGTCTAGCTGGGAG...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR GCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTGAAGTTTCCTGCCTTTaGTGGCTTTCCTATCTACTT +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSEVSCL*WLSYLL
Trigger: AAGTAGATAGGAAAGCCAGCAAAGGCAGGAAACTTC...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR GCA 90 bp ATCGTGCCATTTCTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGAACAACTGTTCCAGTTaGAGCGCCAGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: IVPFLKCAVPVDCKVGKANNCSS*SARGCG
Trigger: GCCGCAGCCCCTGGCGCTGCAACTGGAACAGTTGTT...CGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAGAAATGGCACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613840.1
ENST00000632039.1
ENST00000680579.1
CDS-3UTR GCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATGATCCTGGCAGAGTCTaGTCCCAATGGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: TGSERSIFPGASLLAQPHDPGRV*SQWSSF
Trigger: GAATGAAGACCATTGGGAGCAGACTCTGCCAGGATC...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTACTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCACATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GTAPLRVLGTGSERSIFPHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...TGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp ATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGAGCTGGTCCCACAGTaGTATCTGGTTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: IRHRFGTQHLSRGFPTSSELVPQ*YLVLHG
Trigger: GCCGTGAAGAACCAGATAGCACTGTGGGACCAGCTC...TGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCGGAGGTGGGCGATGTCAATCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAACAATGCTTTAAGTaGCTTGTGACTATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SEVGDVNPRGLRREGGAGQQCFK*LVTIFQ
Trigger: CTGAAAAATAGTCACAAGGCACTTAAAGCATTGTTG...GCCAGCTCCACCCTCCCGACGAAGGCCACGGGGATTGACATCGCCCACCTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
CDS-3UTR GCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: TGSERSIFPGASLLAQPHGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCCTCCAGCTTCCTCTTTaGAGGGACCCTTCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVLQLPL*RDPSSL
Trigger: CAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAG...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTGTCGGCAAAGCGCTTTaGCATGAAGCTGGGATAGTC +
Preference number: 4 (lower is better)
Translates to: ACIRHRFGTQHLSRGFPTVGKAL*HEAGIV
Trigger: GACTATCCCAGCTTCATGGCAAAGCGCTTTGCCGAC...AGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCTGTCCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FVAFKGGVGRDSALACIRLSEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGACAG...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000632435.1
ENST00000680340.1
ENST00000680782.1
CDS-3UTR GCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCTGTCCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSALSEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGACAG...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000632435.1
ENST00000680340.1
ENST00000680782.1
CDS-3UTR GCA 90 bp GTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGCCAACACCAAGTTGGTaGAGCATTTACTTTCAAACA +
Preference number: 4 (lower is better)
Translates to: VTGFLHLDQQPHQPRRPLPTPSW*SIYFQT
Trigger: TGTTTGAAAGTAAATGCTGCACCAACTTGGTGTTGG...CAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR CCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGACAGGCTGAGCTGCTaGCTCAGGTTTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: IRHRFGTQHLSRGFPTSSDRLSC*LRFAKN
Trigger: GTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCTGTC...TGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GATAGTCCTCCATCTCCAGCTTCCTCTTTGCAGGGACCCTTCTTCGTTGCTGCTTGGCCACCTGATCGTTaGGATCCAAGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DSPPSPASSLQGPFFVAAWPPDR*DPRSWS
Trigger: AGACCAGCTCCTTGGATCCCAACGATCAGGTGGCCA...AGCAGCAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAGATGGAGGACTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680579.1
CDS-3UTR CCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTGCTTCGTAACTTCTaGATTGCAAGCCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSILLRNF*IASHCL
Trigger: AAGGCAGTGGCTTGCAATCCAGAAGTTACGAAGCAA...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCACTGGAAAATTCTGGGCCACCTTTGTCCTTGAACAATGGGAAAACATCTGGTCACCCTGGCAGCAGTaGCTTCCTCGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GTGKFWATFVLEQWENIWSPWQQ*LPRGPL
Trigger: AAGCGGACCCCGAGGAAGCCACTGCTGCCAGGGTGA...CCAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
CDS-3UTR CCA 90 bp AGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SIFPGASLLAQPHKVTGFTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...GAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTAGAGTCTGCTCCCAATaGTCTTCATTCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSRVCSQ*SSFHAF
Trigger: AAAAGCATGGAATGAAGACCATTGGGAGCAGACTCT...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGAGAGTCTGCTCCCAATaGTCTTCATTCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRRVCSQ*SSFHAF
Trigger: AAAAGCATGGAATGAAGACCATTGGGAGCAGACTCT...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FVAFKGGVGRDSALACIRGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...CCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCAAGTCACTGATACTCTaGACACTGAAGCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGKSLIL*TLKPGV
Trigger: AACACCGGGCTTCAGTGTCCAGAGTATCAGTGACTT...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGCAAGCCACTGCCTTCCCATGGCCACCTGATCGTTGGGATCCAAGGAGCTGGAAGTCACTGATACTCTaGACACTGAAGCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: LQATAFPWPPDRWDPRSWKSLIL*TLKPGV
Trigger: AACACCGGGCTTCAGTGTCCAGAGTATCAGTGACTT...CCAGCTCCTTGGATCCCAACGATCAGGTGGCCATGGGAAGGCAGTGGCTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680330.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TGCTCTTTATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGAAGTCACTGATACTCTaGACACTGAAGCCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: CSLFVAFKGGVGRDSALAKSLIL*TLKPGV
Trigger: AACACCGGGCTTCAGTGTCCAGAGTATCAGTGACTT...CGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATAAAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATTCCCACAGTGCTATCTaGTTCTTCACGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TGSERSIFPGASLLAQPHSHSAI*FFTALP
Trigger: AGGAAGAGCCGTGAAGAACCAGATAGCACTGTGGGA...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCTCCCACAGTGCTATCTaGTTCTTCACGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFSHSAI*FFTALP
Trigger: AGGAAGAGCCGTGAAGAACCAGATAGCACTGTGGGA...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTACTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCGTTGAGGAAGCTGGTTaGTGGTCAACAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GTGSERSIFPGASLLAQPVEEAG*WSTELF
Trigger: AAAAAGCTCTGTTGACCACCAACCAGCTTCCTCAAC...GGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp CCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTTGAGGAAGCTGGTTaGTGGTCAACAGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PWPSSGGWSWPKRERYSSVEEAG*WSTELF
Trigger: AAAAAGCTCTGTTGACCACCAACCAGCTTCCTCAAC...AGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp AGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCGGCACTGGAAAATTCTaGGCCACCTTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SALACIRHRFGTQHLSRGGTGKF*ATFVLE
Trigger: TTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC...GCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCGGCACTGGAAAATTCTaGGCCACCTTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: RHRFGTQHLSRGFPTSSAGTGKF*ATFVLE
Trigger: TTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC...GGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTGGCACTGGAAAATTCTaGGCCACCTTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFGTGKF*ATFVLE
Trigger: TTCAAGGACAAAGGTGGCCCAGAATTTTCCAGTGCC...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATTTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RVELAKKRAVQFCPGIIISGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...AATGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp ATCGTTGGGATCCAAGGAGCTGGTCTTCCGTTCTATGAGTTCTCGAAGGAGCTGTCGGGAGGGTGGAGCTaGCCAAAAAGAGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: IVGIQGAGLPFYEFSKELSGGWS*PKRERY
Trigger: GTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGA...CAGCTCCTTCGAGAACTCATAGAACGGAAGACCAGCTCCTTGGATCCCAACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680579.1
CDS-3UTR CCA 90 bp AGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCCTTCGTCGGGAGGGTaGAGCTGGCCAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SIFPGASLLAQPHKVTGFPSSGG*SWPKRE
Trigger: CTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGG...GAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
3UTR CAA 72 bp CCTCGGGAAGAATATGCCCTTGCCAAAGGCTGGAAATaGGAGCTCCCCACTGCAGTGGTCTCTGCAATTCCA +
Preference number: 4 (lower is better)
Translates to: PREEYALAKGWK*ELPTAVVSAIP
Trigger: TGGAATTGCAGAGACCACTGCAGTGGGGAGCTCCAATTTCCAGCCTTTGGCAAGGGCATATTCTTCCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR TCA 90 bp AAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCAAGAATATGGTCGATCTaGGTCAAGATTGAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: KVTGFLHLDQQPHQPRRPRIWSI*VKIERS
Trigger: TGAACGCTCAATCTTGACTCAGATCGACCATATTCT...TGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTTGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ACIRHRFGTQHLSRGFPTWSSVL*VLEGAG
Trigger: ACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...AGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTTCTGTCCTGGCATCATCATGGTCTTCCGTTCTATaGGTTCTCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGWSWPKRERYSSVLASSWSSVL*VLEGAG
Trigger: ACCAGCTCCTTCGAGAACTCATAGAACGGAAGACCA...TGATGATGCCAGGACAGAACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680356.1
ENST00000680579.1
CDS-3UTR TCA 90 bp GGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCCAAGAGGGAGGCTaGTGCCAGTTTTCTAATGCT +
Preference number: 4 (lower is better)
Translates to: GSERSIFPGASLLAQPHKVQEGG*CQFSNA
Trigger: AGCATTAGAAAACTGGCATCAGCCTCCCTCTTGGAC...TTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp ATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTGGTTTCCTCCAGACCCAGTCCCTCTaGATCTTCATCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: IFPGASLLAQPHKVTGFLQTQSL*IFISRP
Trigger: GGGTCTGGAGATGAAGATTCAGAGGGACTGGGTCTG...GAGGAAACCAGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCACTTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ERSIFPGASLLAQPHKVTFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...AGTGACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTTCTTGCTCTCCCTGTaGTCACCACACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSFLLSL*SPHSCS
Trigger: GGAACAGGAGTGTGGTGATCACAGGGAGAGCAAGAA...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GATAGTCCTCCATCTCCAGCTTCCTCTTTGCAGGGACCCTTCTTCGTTGCTGCTGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: DSPPSPASSLQGPFFVAAGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...AGCAGCAACGAAGAAGGGTCCCTGCAAAGAGGAAGCTGGAGATGGAGGACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613840.1
ENST00000632039.1
ENST00000680579.1
CDS-3UTR TCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTAGGGAAAACATCTGGTTaGGGAAGCTGGTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLGKTSG*GSWLVV
Trigger: GACCACCAACCAGCTTCCTCAACCAGATGTTTTCCC...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCCACCTTTGTCCTTaGACAATGGGAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRGHLCP*TMGKHL
Trigger: CAGATGTTTTCCCATTGTTCAAGGACAAAGGTGGCC...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCCTGAAGACCTACCAATaGCCTCAACAATGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LGGTAPLRVLGTGSERSILKTYQ*PQQCFK
Trigger: CTTAAAGCATTGTTGAGGTCATTGGTAGGTCTTCAG...GATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp CCCCATAAAGTCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: PHKVTGFLHLDQQPHQPRKSNSS*RPTNDL
Trigger: GAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTT...CCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGACTTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTAAAAGCAACTCTTCCTaGAGACCTACCAATGACCTC +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFKSNSS*RPTNDL
Trigger: GAGGTCATTGGTAGGTCTTCAGGAAGAGTTGCTTTT...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp ATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCACAAAGCGCTTTGCCATaGAGCTGGGATAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IRHRFGTQHLSRGFPTSSQSALP*SWDSPP
Trigger: TGGAGGACTATCCCAGCTTCATGGCAAAGCGCTTTG...TGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCAGTTTCGAGTGCGTGTaGAAAGAAGCCGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSSFECV*KEAEAL
Trigger: GAGGGCTTCGGCTTCTTTTCACACGCACTCGAAACT...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679881.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR TCA 90 bp GACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGTCAGTCGTCAGCCACTaGACAAGTGTCTTGAGACTT +
Preference number: 4 (lower is better)
Translates to: DSALACIRHRFGTQHLSRSVVSH*TSVLRL
Trigger: AAGTCTCAAGACACTTGTTCAGTGGCTGACGACTGA...CCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR TCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGTTTTCTCAGATCCCTTaGGACTGGGCAATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQFSQIP*DWAIRV
Trigger: GACCCTGATTGCCCAGTCTCAAGGGATCTGAGAAAA...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680330.1
CDS-3UTR GCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCCTGCTGGCTCAGGTTTaGCAAGAACTCGATAGACAG +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVLLAQV*QELDRQ
Trigger: CTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAG...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCTGCTGGCTCAGGTTTaGCAAGAACTCGATAGACAG +
Preference number: 4 (lower is better)
Translates to: LGTGSERSIFPGASLLAQLLAQV*QELDRQ
Trigger: CTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAG...CTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCGAAGTTTCCTGCCTTTaGTGGCTTTCCTATCTACTT +
Preference number: 4 (lower is better)
Translates to: LWRLKAGLGGTAPLRVLGEVSCL*WLSYLL
Trigger: AAGTAGATAGGAAAGCCAGCAAAGGCAGGAAACTTC...GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000632435.1
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTGAAGCCCGGTGTTTTTaGAGAGTGGCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ACIRHRFGTQHLSRGFPTEARCF*RVASAL
Trigger: AAGAGCAGAAGCCACTCTGCAAAAACACCGGGCTTC...AGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAAGTCGAAGCCCGGTGTTTTTaGAGAGTGGCTTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SERSIFPGASLLAQPHKVEARCF*RVASAL
Trigger: AAGAGCAGAAGCCACTCTGCAAAAACACCGGGCTTC...GACTTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCCTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTTCCTCCTCCTCACTaGTCCCAAGGTCATCCATTC +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLLPPPH*SQGHPF
Trigger: GAATGGATGACCTTGGGAGCAGTGAGGAGGAGGAAG...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp CTGCTGGCTCAGGTTTGCCAAGAACTCGATAGACAGAGCGCTTGGTCTGTGTCCCATCCCCTTCTTCCATaGCACTCTCTTCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLAQVCQELDRQSAWSVSHPLLP*HSLRLP
Trigger: AGGAAGACGAAGAGAGTGGCATGGAAGAAGGGGATG...GGACACAGACCAAGCGCTCTGTCTATCGAGTTCTTGGCAAACCTGAGCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680579.1
CDS-3UTR GCA 90 bp GGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAACAATGCTTTAAGTaGCTTGTGACTATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GGVGRDSALACIRHRFGTQQCFK*LVTIFQ
Trigger: CTGAAAAATAGTCACAAGGCACTTAAAGCATTGTTG...CGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TATTTGTGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGGACCCTTCTTCGTTaGTGCTTCTTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: YLWRLKAGLGGTAPLRVLGTLLR*CFFSST
Trigger: GGTAGAAGAGAAGAAGCAGCAACGAAGAAGGGTCCC...TAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCACAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR GCA 90 bp GGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTGAAACCGAAGTTTCCTaGCTTTGCTGGCTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GGTAPLRVLGTGSERSIFETEVS*LCWLSY
Trigger: ATAGGAAAGCCAGCAAAGGCAGGAAACTTCGGTTTC...AAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
ENST00000681062.1
CDS-3UTR GCA 90 bp TCACTGGTTTCCTCCATCTGGACCAGCAGCCGCACCAGCCAAGGCGCCCACTGGCCTGAATTAAAAACATaGGACTTTCTTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLVSSIWTSSRTSQGAHWPELKT*DFLLLL
Trigger: AAGGAGGAGAAGAAAGTCGCATGTTTTTAATTCAGG...CCAGTGGGCGCCTTGGCTGGTGCGGCTGCTGGTCCAGATGGAGGAAACCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679881.1
ENST00000680782.1
CDS-3UTR CCA 90 bp ACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATGATAGACAGAGCGCTTaGTCTGTGTCCTTCGAAGTA +
Preference number: 4 (lower is better)
Translates to: TGSERSIFPGASLLAQPHDRQSA*SVSFEV
Trigger: TACTTCGAAGGACACAGACCAAGCGCTCTGTCTATC...ATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TCCCCGTGGCCTTCGTCGGGAGGGTGGAGCTGGCCAAAAAGAGAGCGGTACAGTGTTTCCTGCCTTTGCTaGCTTTCCTATCTACTTTTT +
Preference number: 4 (lower is better)
Translates to: SPWPSSGGWSWPKRERYSVSCLC*LSYLLF
Trigger: AAAAAGTAGATAGGAAAGCCAGCAAAGGCAGGAAAC...ACTGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAAGGCCACGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000679997.1
ENST00000680330.1
ENST00000680356.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TCCTCACTTCCCGCATTGGGCTTTGTCCCATCTACTAGATATCTAGTGTCTGGGACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SSLPALGFVPSTRYLVSGTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...CCCAGACACTAGATATCTAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613840.1
ENST00000632039.1
CDS-3UTR CCA 90 bp CCATTTCTGAAGTGTGCGGTTCCTGTAGACTGTAAAGTCGGCAAAGCGCTTTGCACCTGTCAATCACCCTaGCAGCAGTGGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PFLKCAVPVDCKVGKALCTCQSP*QQWLPR
Trigger: CCGAGGAAGCCACTGCTGCCAGGGTGATTGACAGGT...GCAAAGCGCTTTGCCGACTTTACAGTCTACAGGAACCGCACACTTCAGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613840.1
ENST00000632039.1
ENST00000680579.1
CDS-3UTR CCA 90 bp TGGCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAAGAGTCTGCTCCCAATaGTCTTCATTCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: WRLKAGLGGTAPLRVLGTRVCSQ*SSFHAF
Trigger: AAAAGCATGGAATGAAGACCATTGGGAGCAGACTCT...TGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCCTCATCAGACGATCCTaGCAGAGTCTGCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: CIRHRFGTQHLSRGFPTSLIRRS*QSLLPM
Trigger: CATTGGGAGCAGACTCTGCCAGGATCGTCTGATGAG...GCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCCCTTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCGGTGTTTTTGCAGAGTaGCTTCTGCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ALACIRHRFGTQHLSRGFGVFAE*LLLFLL
Trigger: GAGCAAGAAGAGCAGAAGCCACTCTGCAAAAACACC...GAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp TTGCGTGTATTAGGCACAGGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTTCCTTCCAAGAGCTaGTCCCACAGTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: LRVLGTGSERSIFPGASLLPSKS*SHSAIW
Trigger: CCAGATAGCACTGTGGGACCAGCTCTTGGAAGGAAG...TAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACCTGTGCCTAATACACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GCGTTTAAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTTGTCCTTGAACAATaGGAAAACATCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AFKGGVGRDSALACIRHRFVLEQ*ENIWLR
Trigger: CCTCAACCAGATGTTTTCCCATTGTTCAAGGACAAA...CCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTTAAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp AAAGGCGGGGTTGGGCGGGACAGCGCCCTTGCGTGTATTAGGCACAGGTTCGGATTTGTCCTTGAACAATaGGAAAACATCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: KGGVGRDSALACIRHRFGFVLEQ*ENIWLR
Trigger: CCTCAACCAGATGTTTTCCCATTGTTCAAGGACAAA...TCCGAACCTGTGCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1
ENST00000680330.1
ENST00000680340.1
ENST00000680356.1
ENST00000680579.1
ENST00000680782.1
ENST00000681062.1
CDS-3UTR CCA 90 bp GGTTCGGAACGCAGCATCTTTCCAGGGGCTTCCCTACTAGCTCAGCCCCATAAACCTCACTTCCCGCATTaGGCTTTGTCCCATCTACTA +
Preference number: 4 (lower is better)
Translates to: GSERSIFPGASLLAQPHKPHFPH*ALSHLL
Trigger: TAGTAGATGGGACAAAGCCCAATGCGGGAAGTGAGG...TTTATGGGGCTGAGCTAGTAGGGAAGCCCCTGGAAAGATGCTGCGTTCCGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000616434.2
ENST00000619387.5
ENST00000620004.2
ENST00000679881.1
ENST00000679997.1