RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AASDH (Homo sapiens)

Ensembl gene IDs: ENSG00000157426

Ensembl transcript IDs: ENST00000205214.11, ENST00000451613.5, ENST00000502617.1, ENST00000503808.5, ENST00000510012.1, ENST00000510762.1, ENST00000513376.5, ENST00000514745.5, ENST00000514796.1, ENST00000602986.5

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGAAGCCCAGGTACTGATGTACCAACAAGTTTTTCAATCTCACTaGGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGA +
Preference number: 1 (lower is better)
Translates to: PEAQVLMYQQVFQSH*GAGWTLRNLHHYLR
Trigger: TCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACTTGTTGGTACATCAGTACCTGGGCTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR GCA 90 bp TATCAAAAGTGGGTATTACAACCAGCGGTGAAGCATCTACACATTTaGCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTTCTGAG +
Preference number: 1 (lower is better)
Translates to: YQKWVLQPAVKHLHI*LCLTSTSHVTPFSE
Trigger: CTCAGAAAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTCACCGCTGGTTGTAATACCCACTTTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR CCA 90 bp ATCTTTCACAGTCACAAAGTCTCCTGTAGCTCGCATTGTGCCAAGTaGTACTGTCACTTCATCATCAAGAAAACACACTCTGTTTCTGCC +
Preference number: 1 (lower is better)
Translates to: IFHSHKVSCSSHCAK*YCHFIIKKTHSVSA
Trigger: GGCAGAAACAGAGTGTGTTTTCTTGATGATGAAGTGACAGTACCACTTGGCACAATGCGAGCTACAGGAGACTTTGTGACTGTGAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR GCA 90 bp ACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTaGCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAA +
Preference number: 1 (lower is better)
Translates to: TLRFQDPHFPISRCC*QQHFIAAIVVMESK
Trigger: TTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
3UTR TCA 90 bp TCAAAAAGTACCCGAAAATGCTGGATATTTGGTACTATACACTTATaGGGCACTCTGACAATCTTCGGTATCCCTGTAGTCCCTGATGTA +
Preference number: 1 (lower is better)
Translates to: SKSTRKCWIFGTIHL*GTLTIFGIPVVPDV
Trigger: TACATCAGGGACTACAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACCAAATATCCAGCATTTTCGGGTACTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 90 bp ACTCGAAGAGAAGTAGTGGCTGACAAAACAGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGCAATGTTGGTGTTGCCTGCAAAACA +
Preference number: 1 (lower is better)
Translates to: TRREVVADKTVDLIS*DPNLLSNVGVACKT
Trigger: TGTTTTGCAGGCAACACCAACATTGCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAACTGTTTTGTCAGCCACTACTTCTCTTCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR TCA 90 bp ATCCAGACAATAAACATAATTATCTCTACACCCAATAATGAGCATTaGTTCCAGGACCACAGGAGAAGAGAAGACTTCTCCAGGAAGTTC +
Preference number: 1 (lower is better)
Translates to: IQTINIIISTPNNEH*FQDHRRREDFSRKF
Trigger: GAACTTCCTGGAGAAGTCTTCTCTTCTCCTGTGGTCCTGGAATCAATGCTCATTATTGGGTGTAGAGATAATTATGTTTATTGTCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
3UTR CCA 90 bp TGTGAAGCCATTAGTATCTCTGACTTCAACTACTGTTCCAAGAAGTaGAAATCCCAGTTGTACAGGCAATTCACATTTGAGAGTAGAGTT +
Preference number: 1 (lower is better)
Translates to: CEAISISDFNYCSKK*KSQLYRQFTFESRV
Trigger: AACTCTACTCTCAAATGTGAATTGCCTGTACAACTGGGATTTCCACTTCTTGGAACAGTAGTTGAAGTCAGAGATACTAATGGCTTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 90 bp TTTGACTTCCCAATAAGAACTGGAGAATTTAAGCCTTTCAAATTTTaGATGTTGGTCTGTGAAACTGAGTCAGAAGGACAGGCTGAAGAG +
Preference number: 1 (lower is better)
Translates to: FDFPIRTGEFKPFKF*MLVCETESEGQAEE
Trigger: CTCTTCAGCCTGTCCTTCTGACTCAGTTTCACAGACCAACATTCAAAATTTGAAAGGCTTAAATTCTCCAGTTCTTATTGGGAAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR TCA 90 bp ATAACAGCCCACCACAATAAAGTTTCCACACTTAGATACACATGCTaGGGATTCAATTCGATCTCCCAAAATCTGTTCCCATTTTACCTT +
Preference number: 1 (lower is better)
Translates to: ITAHHNKVSTLRYTC*GFNSISQNLFPFYL
Trigger: AAGGTAAAATGGGAACAGATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGGCTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR TCA 90 bp TTCTTTCTCCACCACAATAAAGTTTCCACACTTAGATACACATGCTaGGGATTCAATTCGATCTCCCAAAATCTGTTCCCATTTTACCTT +
Preference number: 1 (lower is better)
Translates to: FFLHHNKVSTLRYTC*GFNSISQNLFPFYL
Trigger: AAGGTAAAATGGGAACAGATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGAGAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 90 bp TCTTTTCCATCATTTAGCATCAAGTTCACCTCAGTATTTTTCCAGTaGAGTCTGAAGAGCACTAGGTCATTATGTTCCACTGTAAATGTA +
Preference number: 1 (lower is better)
Translates to: SFPSFSIKFTSVFFQ*SLKSTRSLCSTVNV
Trigger: TACATTTACAGTGGAACATAATGACCTAGTGCTCTTCAGACTTCACTGGAAAAATACTGAGGTGAACTTGATGCTAAATGATGGAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAAACTTATGAGGCACTCTaGCAATCTTCGGTATCCCTG +
Preference number: 2 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQTYEAL*QSSVSL
Trigger: CAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGT...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp TGCTCTGATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACCCACTGGCTTCCTCTTaGTTAATGTCGCTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: CSDGEVHGDEKIGPLVENPLASS*LMSLSF
Trigger: GAAACTCAGCGACATTAATCAAGAGGAAGCCAGTGG...GTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp TGCTCTGATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACATCGAAGGTCAGAGGTaGAGCCAGAAACAAAACATC +
Preference number: 2 (lower is better)
Translates to: CSDGEVHGDEKIGPLVENIEGQR*SQKQNI
Trigger: GATGTTTTGTTTCTGGCTTCACCTCTGACCTTCGAT...GTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp TGCTCTGATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACCAACTTGACGGAAGTTaGTACAATAAGCAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: CSDGEVHGDEKIGPLVENQLDGS*YNKQRG
Trigger: GCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTG...GTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp TGCTCTGATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTCGCATTGTGCCAAGTaGTACTGTCACTTCATCATC +
Preference number: 2 (lower is better)
Translates to: CSDGEVHGDEKIGPLVENSHCAK*YCHFII
Trigger: GATGATGAAGTGACAGTACCACTTGGCACAATGCGA...GTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp TTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGAGGCACCACTTCCCAATAATGAGCATTaGTTCCAGGACCACAGGAGA +
Preference number: 2 (lower is better)
Translates to: FDGSNLTEVGTISREAPLPNNEH*FQDHRR
Trigger: TCTCCTGTGGTCCTGGAATCAATGCTCATTATTGGG...AAGTGGTGCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR TCA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAAGTCATGATGGCTTTCTaGTGTAAAGATGTTCCACTG +
Preference number: 2 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQVMMAF*CKDVPL
Trigger: CAGTGGAACATCTTTACATCAGAAAGCCATCATGAC...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR GCA 90 bp TGCTCTGATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACAAGCAATGTTGGTGTTaGCTGCAAAACAGTCACTCT +
Preference number: 2 (lower is better)
Translates to: CSDGEVHGDEKIGPLVENKQCWC*LQNSHS
Trigger: AGAGTGACTGTTTTGCAGGCAACACCAACATTGCTT...GTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp ACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCCTATCGCAGGTTTCCCCTTACTGTTCCAAGAAGTaGAAATCCCAGTTGTACAGG +
Preference number: 2 (lower is better)
Translates to: TSTSHVTPFSESLSQVSPYCSKK*KSQLYR
Trigger: CCTGTACAACTGGGATTTCCACTTCTTGGAACAGTA...AGGGGAAACCTGCGATAGGGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCAATTTCCACTGCAGGTaGCCTTTCATGTTACAACAG +
Preference number: 2 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCNFHCR*PFMLQQ
Trigger: CTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATT...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp ACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCCTATCGCAGGTTTCCCCTTTTTCCAGTGAAGTCTaGAGAGCACTAGGTCATTAT +
Preference number: 2 (lower is better)
Translates to: TSTSHVTPFSESLSQVSPFSSEV*RALGHY
Trigger: ATAATGACCTAGTGCTCTTCAGACTTCACTGGAAAA...AGGGGAAACCTGCGATAGGGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR GCA 90 bp GTGAAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCAAAGCTCATCCGGGACTaGATGACTTGGAAGATATTT +
Preference number: 2 (lower is better)
Translates to: VKHLHICLCLTSTSHVTPKLIRD*MTWKIF
Trigger: AAATATCTTCCAAGTCATGCAGTCCCGGATGAGCTT...TGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp GTGAAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCAGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: VKHLHICLCLTSTSHVTPVDLIS*DPNLLS
Trigger: GCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAAC...TGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp TGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGGAACCCTCTGAGAACTGTCAATaGTGGAAACGCTTCACCACC +
Preference number: 2 (lower is better)
Translates to: WTLRNLHHYLRRVTHQEPSENCQ*WKRFTT
Trigger: GGTGGTGAAGCGTTTCCATCATTGACAGTTCTCAGA...GGGTTCCTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp CCACAGGAATGTTTCCAAATAACGTTCCCAGTAGCAGGATTTACAGCCAGTAAACTCCTCTCCAGCTTCTaGGAACTGTCAATGATGGAA +
Preference number: 2 (lower is better)
Translates to: PQECFQITFPVAGFTASKLLSSF*ELSMME
Trigger: TTCCATCATTGACAGTTCTCAGAAGCTGGAGAGGAG...TTTACTGGCTGTAAATCCTGCTACTGGGAACGTTATTTGGAAACATTCCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR GCA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAAGCAACATTTCATTGCTaGCATTGTAGTTATGGAAAG +
Preference number: 2 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQATFHC*HCSYGK
Trigger: CTTTCCATAACTACAATGGCAGCAATGAAATGTTGC...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR GCA 90 bp GCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGTTTCCCATCAGTAGATaGTGCTGCCAGCAACATTTC +
Preference number: 2 (lower is better)
Translates to: AGWTLRNLHHYLRRVTHQFPISR*CCQQHF
Trigger: GAAATGTTGCTGGCAGCAGCATCTACTGATGGGAAA...CTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR CCA 90 bp AAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTCAACTTGACGGAAGTTaGTACAATAAGCAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: KHLHICLCLTSTSHVTPFQLDGS*YNKQRG
Trigger: GCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTG...AAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp AGTTTTTCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTAGGGAAAAGAGAACGCTaGCTAATTTTGATGGGAGCA +
Preference number: 2 (lower is better)
Translates to: SFSISLRSRMDFKESPPLGKRER*LILMGA
Trigger: TGCTCCCATCAAAATTAGCCAGCGTTCTCTTTTCCC...TAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp TCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGGGAAAAGAGAACGCTaGCTAATTTTGATGGGAGCA +
Preference number: 2 (lower is better)
Translates to: SLRSRMDFKESPPLFKKSGKRER*LILMGA
Trigger: TGCTCCCATCAAAATTAGCCAGCGTTCTCTTTTCCC...ACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAATTTCCACTGCAGGTaGCCTTTCATGTTACAACAG +
Preference number: 2 (lower is better)
Translates to: SISLRSRMDFKESPPLFKNFHCR*PFMLQQ
Trigger: CTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATT...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTTGCAATTGTCCACTCTaGGATTCCAAGATCCACACT +
Preference number: 2 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCCNCPL*DSKIHT
Trigger: AGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCA...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR TCA 90 bp ACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGATCAGTATTTTTCCAGTaGAGTCTGAAGAGCACTAGG +
Preference number: 2 (lower is better)
Translates to: TLANFDGSNLTEVGTISRSVFFQ*SLKSTR
Trigger: CCTAGTGCTCTTCAGACTTCACTGGAAAAATACTGA...TCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp AAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTAAAACAGTCACTCTATaGTGGGAAAAGAGAACGCTG +
Preference number: 2 (lower is better)
Translates to: KHLHICLCLTSTSHVTPFKTVTL*WEKRTL
Trigger: CAGCGTTCTCTTTTCCCATCATAGAGTGACTGTTTT...AAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAAACAGTCACTCTATaGTGGGAAAAGAGAACGCTG +
Preference number: 2 (lower is better)
Translates to: SISLRSRMDFKESPPLFKKTVTL*WEKRTL
Trigger: CAGCGTTCTCTTTTCCCATCATAGAGTGACTGTTTT...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp AATTCCCATCTACACAGCCAATACAAATATACTGTGAGCAACATTGTGGGGAAGCTCCTCTCCAGCTTCTaGGAACTGTCAATGATGGAA +
Preference number: 2 (lower is better)
Translates to: NSHLHSQYKYTVSNIVGKLLSSF*ELSMME
Trigger: TTCCATCATTGACAGTTCTCAGAAGCTGGAGAGGAG...CTTCCCCACAATGTTGCTCACAGTATATTTGTATTGGCTGTGTAGATGGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp TGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGGAACCCAATGGTCGCCCAACTTaGTACCTCTGTGATACCATA +
Preference number: 2 (lower is better)
Translates to: WTLRNLHHYLRRVTHQEPNGRPT*YLCDTI
Trigger: TATGGTATCACAGAGGTATCAAGTTGGGCGACCATT...GGGTTCCTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp CACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCGCATTAATCTCATTGTaGCAAGTGAAAGTCATGATG +
Preference number: 2 (lower is better)
Translates to: HICLCLTSTSHVTPFSESALISL*QVKVMM
Trigger: CATCATGACTTTCACTTGCCACAATGAGATTAATGC...GGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR CAA 90 bp AGGAGAAGAGAAGACTTCTCCAGGAAGTTCATAAACACTTTGCAATaGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGA +
Preference number: 2 (lower is better)
Translates to: RRREDFSRKFINTLQ*STLRFQDPHFPISR
Trigger: TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTATGAACTTCCTGGAGAAGTCTTCTCTTCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGCTGCTTTTTCTTCATTaGCATGCTCAGAACTTATGC +
Preference number: 2 (lower is better)
Translates to: SISLRSRMDFKESPPLFKLLFLH*HAQNLC
Trigger: GCATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAG...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp AAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCAAAATCTGGCCACTGCCTTCCTaGATTGTGAAGCCATTAGTA +
Preference number: 2 (lower is better)
Translates to: KFPHLDTHAEDSIRSPKIWPLPS*IVKPLV
Trigger: TACTAATGGCTTCACAATTCAGGAAGGCAGTGGCCA...GATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR CCA 90 bp AGTTTTTCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATCTTCTAAGCAATGTTaGTGTTGCCTGCAAAACAGT +
Preference number: 2 (lower is better)
Translates to: SFSISLRSRMDFKESPPLSSKQC*CCLQNS
Trigger: ACTGTTTTGCAGGCAACACCAACATTGCTTAGAAGA...TAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTCTGGAATCCTATAAATaGTCGCCCAACTTGATACCT +
Preference number: 2 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCLESYK*SPNLIP
Trigger: AGGTATCAAGTTGGGCGACCATTTATAGGATTCCAG...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGGTTAAGAGTCTTCTCTaGAATCCTATAAATGGTCGC +
Preference number: 2 (lower is better)
Translates to: SISLRSRMDFKESPPLFKVKSLL*NPINGR
Trigger: GCGACCATTTATAGGATTCCAGAGAAGACTCTTAAC...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp CACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCTCAAATTTTGAATGTTaGTCTGTGAAACTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: HICLCLTSTSHVTPFSESSNFEC*SVKLSQ
Trigger: CTGACTCAGTTTCACAGACCAACATTCAAAATTTGA...GGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp TTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCTGTTGCATAGACCCTTaGAGTAGTTTCAAATTTCCA +
Preference number: 2 (lower is better)
Translates to: LWGREEWFSTGMFPNNVPCCIDP*SSFKFP
Trigger: TGGAAATTTGAAACTACTTCAAGGGTCTATGCAACA...GGGAACGTTATTTGGAAACATTCCTGTGGAAAACCACTCTTCTCTTCCCCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp GCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGAAACATCTTCTTGTGTaGTGTCAAAAAGTACCCGAA +
Preference number: 2 (lower is better)
Translates to: AGWTLRNLHHYLRRVTHQKHLLV*CQKVPE
Trigger: TTCGGGTACTTTTTGACATCACACAAGAAGATGTTT...CTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp TCAGGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: SGTLKRSSGRFRVDFHKYVDLIS*DPNLLS
Trigger: GCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAAC...GTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp AACTCAGAAACATCAATTTTGCCGTGGGATGTAAATGGTAGAGAGTCGATCAATAATGGTCGCCCAACTTaGTACCTCTGTGATACCATA +
Preference number: 2 (lower is better)
Translates to: NSETSILPWDVNGRESINNGRPT*YLCDTI
Trigger: TATGGTATCACAGAGGTATCAAGTTGGGCGACCATT...ATTGATCGACTCTCTACCATTTACATCCCACGGCAAAATTGATGTTTCTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp AACTCAGAAACATCAATTTTGCCGTGGGATGTAAATGGTAGAGAGTCGATCAATGTTTGCCATGACGTTTaGTCTGACTGTCTTTTCGTC +
Preference number: 2 (lower is better)
Translates to: NSETSILPWDVNGRESINVCHDV*SDCLFV
Trigger: GACGAAAAGACAGTCAGATCAAACGTCATGGCAAAC...ATTGATCGACTCTCTACCATTTACATCCCACGGCAAAATTGATGTTTCTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp AAACACACTTCTTTCTCCACCACAATAAAGTTTCCACACTTAGATACACATGCTTCATCCGGGACTGCATaGCTTGGAAGATATTTCTGC +
Preference number: 2 (lower is better)
Translates to: KHTSFSTTIKFPHLDTHASSGTA*LGRYFC
Trigger: GCAGAAATATCTTCCAAGTCATGCAGTCCCGGATGA...AGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGAGAAAGAAGTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp AAAATACAAATGATGTGGAATCAGGTTCAAACACGGAGAGGAAAAGACAGTTCCGGTACTATACACTTATaGGGCACTCTGACAATCTTC +
Preference number: 2 (lower is better)
Translates to: KIQMMWNQVQTRRGKDSSGTIHL*GTLTIF
Trigger: GAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACC...GGAACTGTCTTTTCCTCTCCGTGTTTGAACCTGATTCCACATCATTTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR TCA 90 bp ACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCACAGGATGGATCTTTTaGCTTCCCAATAAGAACTGG +
Preference number: 2 (lower is better)
Translates to: TIKFPHLDTHAEDSIRSPTGWIF*LPNKNW
Trigger: CCAGTTCTTATTGGGAAGTCAAAAGATCCATCCTGT...GGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR GCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAGCAACATTTCATTGCTaGCATTGTAGTTATGGAAAG +
Preference number: 2 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRATFHC*HCSYGK
Trigger: CTTTCCATAACTACAATGGCAGCAATGAAATGTTGC...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp TTTTTCCCAAAGGTCCTCTTTCCCACTGAGCTTATTCTCAGACTTCAAGTTTATGTTAAGAGTCTTCTCTaGAATCCTATAAATGGTCGC +
Preference number: 2 (lower is better)
Translates to: FFPKVLFPTELILRLQVYVKSLL*NPINGR
Trigger: GCGACCATTTATAGGATTCCAGAGAAGACTCTTAAC...ATAAACTTGAAGTCTGAGAATAAGCTCAGTGGGAAAGAGGACCTTTGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp AAAATACAAATGATGTGGAATCAGGTTCAAACACGGAGAGGAAAAGACAGTTCCACATCAATTTTGCCGTaGGATGTAAATGGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: KIQMMWNQVQTRRGKDSSTSILP*DVNGRE
Trigger: CTCTCTACCATTTACATCCCACGGCAAAATTGATGT...GGAACTGTCTTTTCCTCTCCGTGTTTGAACCTGATTCCACATCATTTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR GCA 90 bp AACTCAGAAACATCAATTTTGCCGTGGGATGTAAATGGTAGAGAGTCGATCAATTCTTCAGCAACCTGTTaGACAAGTTCAATGTTAAGA +
Preference number: 2 (lower is better)
Translates to: NSETSILPWDVNGRESINSSATC*TSSMLR
Trigger: TCTTAACATTGAACTTGTGCAACAGGTTGCTGAAGA...ATTGATCGACTCTCTACCATTTACATCCCACGGCAAAATTGATGTTTCTGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR GCA 90 bp AAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCAAAATCAAATTTGACTCCCTCTaGTCAGTACAACAAAAGCAT +
Preference number: 2 (lower is better)
Translates to: KFPHLDTHAEDSIRSPKIKFDSL*SVQQKH
Trigger: ATGCTTTTGTTGTACTGAGCAGAGGGAGTCAAATTT...GATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR GCA 90 bp CTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAATCATGGGAACCAAAAGAGTAAAAGTCAACTaGCTTCATTCTATGAGAATG +
Preference number: 2 (lower is better)
Translates to: LQVTFHVTTVDKAIMGTKRVKVN*LHSMRM
Trigger: CATTCTCATAGAATGAAGGCAGTTGACTTTTACTCT...TTTGGTTCCCATGATTGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CCA 90 bp AATTCCCATCTACACAGCCAATACAAATATACTGTGAGCAACATTGTGGGGAAGTCAAATTTTGAATGTTaGTCTGTGAAACTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: NSHLHSQYKYTVSNIVGKSNFEC*SVKLSQ
Trigger: CTGACTCAGTTTCACAGACCAACATTCAAAATTTGA...CTTCCCCACAATGTTGCTCACAGTATATTTGTATTGGCTGTGTAGATGGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR TCA 90 bp AAACACACTTCTTTCTCCACCACAATAAAGTTTCCACACTTAGATACACATGCTTGTTGCATAGACCCTTaGAGTAGTTTCAAATTTCCA +
Preference number: 2 (lower is better)
Translates to: KHTSFSTTIKFPHLDTHACCIDP*SSFKFP
Trigger: TGGAAATTTGAAACTACTTCAAGGGTCTATGCAACA...AGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGAGAAAGAAGTGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 72 bp GTGTCTGACCTCCACCTCACATGTAACTCCATTTTCTaGGTCCCTATCGCAGGTTTCCCCTCTTCAGAAACT +
Preference number: 3 (lower is better)
Translates to: VSDLHLTCNSIF*VPIAGFPSSET
Trigger: AGTTTCTGAAGAGGGGAAACCTGCGATAGGGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGTCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR GCA 72 bp TGGGTATTACAACCAGCGGTGAAGCATCTACACATTTaGCTGTGTCTGACCTCCACCTCACATGTAACTCCA +
Preference number: 3 (lower is better)
Translates to: WVLQPAVKHLHI*LCLTSTSHVTP
Trigger: TGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTCACCGCTGGTTGTAATACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAAATTCAGAGACAAAATTaGACTCCCTCTGCTCAGTAC +
Preference number: 3 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQIQRQN*TPSAQY
Trigger: GTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAAT...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR TCA 72 bp AAGCATATGCGTGCTGGTCATGAGATCCAATGTAAATaGGTCCTGTGGTTGGATCCATGGTTGCCGAGCTTT +
Preference number: 3 (lower is better)
Translates to: KHMRAGHEIQCK*VLWLDPWLPSF
Trigger: AAAGCTCGGCAACCATGGATCCAACCACAGGACTCATTTACATTGGATCTCATGACCAGCACGCATATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR CAA 90 bp AAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTCCGGGACTGCATGACTaGGAAGATATTTCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: KHLHICLCLTSTSHVTPFPGLHD*EDISAV
Trigger: AACTGCAGAAATATCTTCCAAGTCATGCAGTCCCGG...AAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAATCAGAAACATCAATTTaGCCGTGGGATGTAAATGGT +
Preference number: 3 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQSETSI*PWDVNG
Trigger: ACCATTTACATCCCACGGCAAAATTGATGTTTCTGA...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR TCA 72 bp CAGGTACTGATGTACCAACAAGTTTTTCAATCTCACTaGGGAGCCGGATGGACTTTAAGGAATCTCCACCAC +
Preference number: 3 (lower is better)
Translates to: QVLMYQQVFQSH*GAGWTLRNLHH
Trigger: GTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACTTGTTGGTACATCAGTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR CCA 72 bp AGTCACAAAGTCTCCTGTAGCTCGCATTGTGCCAAGTaGTACTGTCACTTCATCATCAAGAAAACACACTCT +
Preference number: 3 (lower is better)
Translates to: SHKVSCSSHCAK*YCHFIIKKTHS
Trigger: AGAGTGTGTTTTCTTGATGATGAAGTGACAGTACCACTTGGCACAATGCGAGCTACAGGAGACTTTGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 72 bp ACCCGAAAATGCTGGATATTTGGTACTATACACTTATaGGGCACTCTGACAATCTTCGGTATCCCTGTAGTC +
Preference number: 3 (lower is better)
Translates to: TRKCWIFGTIHL*GTLTIFGIPVV
Trigger: GACTACAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACCAAATATCCAGCATTTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 72 bp GGAACTGCTGAGAATAATTTCCAGAAGCCCAGGTACTaGTGTACCAACAAGTTTTTCAATCTCACTGAGGAG +
Preference number: 3 (lower is better)
Translates to: GTAENNFQKPRY*CTNKFFNLTEE
Trigger: CTCCTCAGTGAGATTGAAAAACTTGTTGGTACATCAGTACCTGGGCTTCTGGAAATTATTCTCAGCAGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp TTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGAGGCACCACTTAAGTTCATAAACACTTaGCAATTGTCCACTCTGAGA +
Preference number: 3 (lower is better)
Translates to: FDGSNLTEVGTISREAPLKFINT*QLSTLR
Trigger: TCTCAGAGTGGACAATTGCAAAGTGTTTATGAACTT...AAGTGGTGCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR CAA 90 bp TTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCACAGGCAATTCACATTaGAGAGTAGAGTTAAGAGTC +
Preference number: 3 (lower is better)
Translates to: LWGREEWFSTGMFPNNVPTGNSH*RVELRV
Trigger: GACTCTTAACTCTACTCTCAAATGTGAATTGCCTGT...GGGAACGTTATTTGGAAACATTCCTGTGGAAAACCACTCTTCTCTTCCCCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 72 bp GAAGTAGTGGCTGACAAAACAGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGCAATGTTGGTGTTGCC +
Preference number: 3 (lower is better)
Translates to: EVVADKTVDLIS*DPNLLSNVGVA
Trigger: GGCAACACCAACATTGCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAACTGTTTTGTCAGCCACTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp GCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGATAAACACTTTGCAATaGTCCACTCTGAGATTCCAA +
Preference number: 3 (lower is better)
Translates to: AGWTLRNLHHYLRRVTHQINTLQ*STLRFQ
Trigger: TTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT...CTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR CAA 90 bp ACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCTCCACTGGCTTCCTCTaGATTAATGTCGCTGAGTTT +
Preference number: 3 (lower is better)
Translates to: TIKFPHLDTHAEDSIRSPSTGFL*INVAEF
Trigger: AAACTCAGCGACATTAATCAAGAGGAAGCCAGTGGA...GGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAAGCTCTTCAGCAACTaGAGAGTAGAGTTAAGAGTC +
Preference number: 3 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIKLFSN*RVELRV
Trigger: GACTCTTAACTCTACTCTCAAGTTGCTGAAGAGCTT...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
3UTR-3UTR CAA 90 bp AAAATACAAATGATGTGGAATCAGGTTCAAACACGGAGAGGAAAAGACAGTTCCTTTGATGGGAGCAACTaGACGGAAGTTGGTACAATA +
Preference number: 3 (lower is better)
Translates to: KIQMMWNQVQTRRGKDSSFDGSN*TEVGTI
Trigger: TATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA...GGAACTGTCTTTTCCTCTCCGTGTTTGAACCTGATTCCACATCATTTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp AAAATACAAATGATGTGGAATCAGGTTCAAACACGGAGAGGAAAAGACAGTTCCATTCAGAGACAAAATTaGACTCCCTCTGCTCAGTAC +
Preference number: 3 (lower is better)
Translates to: KIQMMWNQVQTRRGKDSSIQRQN*TPSAQY
Trigger: GTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAAT...GGAACTGTCTTTTCCTCTCCGTGTTTGAACCTGATTCCACATCATTTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR TCA 72 bp CACCACAATAAAGTTTCCACACTTAGATACACATGCTaGGGATTCAATTCGATCTCCCAAAATCTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: HHNKVSTLRYTC*GFNSISQNLFP
Trigger: TGGGAACAGATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCATAAACACTTTGCAATaGTCCACTCTGAGATTCCAA +
Preference number: 3 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIINTLQ*STLRFQ
Trigger: TTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
3UTR-3UTR CAA 90 bp TTTTTCCCAAAGGTCCTCTTTCCCACTGAGCTTATTCTCAGACTTCAAGTTTATAAGTGGAAATCCCAGTaGTACAGGCAATTCACATTT +
Preference number: 3 (lower is better)
Translates to: FFPKVLFPTELILRLQVYKWKSQ*YRQFTF
Trigger: AAATGTGAATTGCCTGTACAACTGGGATTTCCACTT...ATAAACTTGAAGTCTGAGAATAAGCTCAGTGGGAAAGAGGACCTTTGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR CCA 72 bp ATTAGTATCTCTGACTTCAACTACTGTTCCAAGAAGTaGAAATCCCAGTTGTACAGGCAATTCACATTTGAG +
Preference number: 3 (lower is better)
Translates to: ISISDFNYCSKK*KSQLYRQFTFE
Trigger: CTCAAATGTGAATTGCCTGTACAACTGGGATTTCCACTTCTTGGAACAGTAGTTGAAGTCAGAGATACTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR-3UTR CAA 90 bp ACTTCTTTCTCCACCACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCTGCTTTTTCTTCATaGACATGCTCAGAACTTATG +
Preference number: 3 (lower is better)
Translates to: TSFSTTIKFPHLDTHAEDSAFSS*TCSELM
Trigger: CATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAGA...ATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGAGAAAGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
3UTR TCA 72 bp GCATCTTTAGACACCATGAAGAGAATTAATTTTTCCTaGTTATACCATGTAACTGCACAAGACTCCACTTGC +
Preference number: 3 (lower is better)
Translates to: ASLDTMKRINFS*LYHVTAQDSTC
Trigger: GCAAGTGGAGTCTTGTGCAGTTACATGGTATAATCAGGAAAAATTAATTCTCTTCATGGTGTCTAAAGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TGCTCTGATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACCAAGACTCCACTTGCTaGAGCTCTTCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: CSDGEVHGDEKIGPLVENQDSTC*SSSATC
Trigger: ACAGGTTGCTGAAGAGCTTCAGCAAGTGGAGTCTTG...GTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp GTTCAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGAAATCCAGGGACTCTTaGCCCCAAGGCCCACAATAT +
Preference number: 4 (lower is better)
Translates to: VQIQGLLTPRPTILISTGKSRDS*PQGPQY
Trigger: ATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTT...CCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
3UTR CAA 72 bp GTGGGTATTACAACCAGCGGTGAAGCATCTACACATTaGCCTGTGTCTGACCTCCACCTCACATGTAACTCC +
Preference number: 4 (lower is better)
Translates to: VGITTSGEASTH*PVSDLHLTCNS
Trigger: GGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTCACCGCTGGTTGTAATACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp GTTCAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTCTGAGAACTGTCAATaGTGGAAACGCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: VQIQGLLTPRPTILISTGSENCQ*WKRFTT
Trigger: GGTGGTGAAGCGTTTCCATCATTGACAGTTCTCAGA...CCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAACTCCTCTCCAGCTTCTaGGAACTGTCAATGATGGAA +
Preference number: 4 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQLLSSF*ELSMME
Trigger: TTCCATCATTGACAGTTCTCAGAAGCTGGAGAGGAG...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCCTATCGCAGGTTTCCCCTTGGCCACTGCCTTCCTaGATTGTGAAGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: TSTSHVTPFSESLSQVSPWPLPS*IVKPLV
Trigger: TACTAATGGCTTCACAATTCAGGAAGGCAGTGGCCA...AGGGGAAACCTGCGATAGGGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp ACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCCTATCGCAGGTTTCCCCTCCCAATAATGAGCATTaGTTCCAGGACCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSTSHVTPFSESLSQVSPPNNEH*FQDHRR
Trigger: TCTCCTGTGGTCCTGGAATCAATGCTCATTATTGGG...AGGGGAAACCTGCGATAGGGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR GCA 90 bp TGCTCTGATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACAAGCATCTACACATTTaGCTGTGTCTGACCTCCACC +
Preference number: 4 (lower is better)
Translates to: CSDGEVHGDEKIGPLVENKHLHI*LCLTST
Trigger: GGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT...GTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAACCACTGGTAGAGAACTaGCAAACCTGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQPLVEN*QTCSPK
Trigger: CTTTGGAGAACAGGTTTGGCAGTTCTCTACCAGTGG...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTTATGAGGCACTCTaGCAATCTTCGGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: QIQGLLTPRPTILISTGLTYEAL*QSSVSL
Trigger: CAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGT...TAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp CAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTACTCCTCTCCAGCTTCTaGGAACTGTCAATGATGGAA +
Preference number: 4 (lower is better)
Translates to: QIQGLLTPRPTILISTGLLLSSF*ELSMME
Trigger: TTCCATCATTGACAGTTCTCAGAAGCTGGAGAGGAG...TAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp GTTCAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGAATGGTCGCCCAACTTaGTACCTCTGTGATACCATA +
Preference number: 4 (lower is better)
Translates to: VQIQGLLTPRPTILISTGNGRPT*YLCDTI
Trigger: TATGGTATCACAGAGGTATCAAGTTGGGCGACCATT...CCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp GTGAAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATCATCCGGGACTGCATaGCTTGGAAGATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: VKHLHICLCLTSTSHVTPSSGTA*LGRYFC
Trigger: GCAGAAATATCTTCCAAGTCATGCAGTCCCGGATGA...TGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp GTTCAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGGTTTTTCAATCTCACTaGGGAGCCGGATGGACTTTA +
Preference number: 4 (lower is better)
Translates to: VQIQGLLTPRPTILISTGVFQSH*GAGWTL
Trigger: TAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAAC...CCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp CAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAGTTTGCCATGACGTTTaGTCTGACTGTCTTTTCGTC +
Preference number: 4 (lower is better)
Translates to: QIQGLLTPRPTILISTGLVCHDV*SDCLFV
Trigger: GACGAAAAGACAGTCAGATCAAACGTCATGGCAAAC...TAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCCAGAAGCCCAGGTACTaGTGTACCAACAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCQKPRY*CTNKFF
Trigger: GAAAAACTTGTTGGTACATCAGTACCTGGGCTTCTG...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AGCCCAGGTACTGATGTACCAACAAGTTTTTCAATCTCACTGAGGAGCCGGATGTGTAACTCCATTTTCTaGGTCCCTATCGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SPGTDVPTSFSISLRSRMCNSIF*VPIAGF
Trigger: GAAACCTGCGATAGGGACTCAGAAAATGGAGTTACA...CATCCGGCTCCTCAGTGAGATTGAAAAACTTGTTGGTACATCAGTACCTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCTTTCCCATCAGTAGATaGTGCTGCCAGCAACATTTC +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCFPISR*CCQQHF
Trigger: GAAATGTTGCTGGCAGCAGCATCTACTGATGGGAAA...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAAGTAGGTGTAGTAAACTaGAAGCTGGTTGTTGCATTC +
Preference number: 4 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQVGVVN*KLVVAF
Trigger: GAATGCAACAACCAGCTTCCAGTTTACTACACCTAC...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp CCTCTCCAGCTTCTGAGAACTGTCAATGATGGAAACGCTTCACCACCAAGGGCTGTTAAGAGTCTTCTCTaGAATCCTATAAATGGTCGC +
Preference number: 4 (lower is better)
Translates to: PLQLLRTVNDGNASPPRAVKSLL*NPINGR
Trigger: GCGACCATTTATAGGATTCCAGAGAAGACTCTTAAC...AGCCCTTGGTGGTGAAGCGTTTCCATCATTGACAGTTCTCAGAAGCTGGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp TTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCAATGAGTCCTGTGGTTaGATCCATGGTTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LWGREEWFSTGMFPNNVPNESCG*IHGCRA
Trigger: AGCTCGGCAACCATGGATCCAACCACAGGACTCATT...GGGAACGTTATTTGGAAACATTCCTGTGGAAAACCACTCTTCTCTTCCCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR TCA 90 bp GTTCAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTATGCACCAATTCCTaGAGAGTCATTTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: VQIQGLLTPRPTILISTGLCTNS*RVISLK
Trigger: CTTCAGTGAAATGACTCTTCAGGAATTGGTGCATAA...CCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCTCAGTATTTTTCCAGTaGAGTCTGAAGAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCSVFFQ*SLKSTR
Trigger: CCTAGTGCTCTTCAGACTTCACTGGAAAAATACTGA...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGACTTATGAGGCACTCTaGCAATCTTCGGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: SISLRSRMDFKESPPLFKTYEAL*QSSVSL
Trigger: CAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGT...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCGGTACTATACACTTATaGGGCACTCTGACAATCTTC +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCGTIHL*GTLTIF
Trigger: GAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACC...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp CCAGGTACTGATGTACCAACAAGTTTTTCAATCTCACTGAGGAGCCGGATGGACAAAACAGTCACTCTATaGTGGGAAAAGAGAACGCTG +
Preference number: 4 (lower is better)
Translates to: PGTDVPTSFSISLRSRMDKTVTL*WEKRTL
Trigger: CAGCGTTCTCTTTTCCCATCATAGAGTGACTGTTTT...GTCCATCCGGCTCCTCAGTGAGATTGAAAAACTTGTTGGTACATCAGTACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CACAGTCACAAAGTCTCCTGTAGCTCGCATTGTGCCAAGTGGTACTGTCACTTCGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: HSHKVSCSSHCAKWYCHFVDLIS*DPNLLS
Trigger: GCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAAC...GAAGTGACAGTACCACTTGGCACAATGCGAGCTACAGGAGACTTTGTGACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGTCTGAGAACTGTCAATaGTGGAAACGCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLSENCQ*WKRFTT
Trigger: GGTGGTGAAGCGTTTCCATCATTGACAGTTCTCAGA...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTCCACTGGCTTCCTCTTaGTTAATGTCGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SLRSRMDFKESPPLFKKSPLASS*LMSLSF
Trigger: GAAACTCAGCGACATTAATCAAGAGGAAGCCAGTGG...ACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp GATGGTGAGGTACACGGGGATGAAAAGATTGGTCCACTGGTAGAGAACTGCCAAACCTGTTCTCCAAAGTaGGTAAAGCAGAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: DGEVHGDEKIGPLVENCQTCSPK*VKQSKF
Trigger: GAATTTACTCTGCTTTACTCACTTTGGAGAACAGGT...TTGGCAGTTCTCTACCAGTGGACCAATCTTTTCATCCCCGTGTACCTCACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCAAGCTCATCCGGGACTaGATGACTTGGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCKLIRD*MTWKIF
Trigger: AAATATCTTCCAAGTCATGCAGTCCCGGATGAGCTT...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AGCCCAGGTACTGATGTACCAACAAGTTTTTCAATCTCACTGAGGAGCCGGATGAAGCTCATCCGGGACTaGATGACTTGGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: SPGTDVPTSFSISLRSRMKLIRD*MTWKIF
Trigger: AAATATCTTCCAAGTCATGCAGTCCCGGATGAGCTT...CATCCGGCTCCTCAGTGAGATTGAAAAACTTGTTGGTACATCAGTACCTGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp GCAAGAAATATTTCCACAACAGAAGGATCGAAGGTCAGAGGTGAAGCCAGAAACAAGCATCTACACATTTaGCTGTGTCTGACCTCCACC +
Preference number: 4 (lower is better)
Translates to: ARNISTTEGSKVRGEARNKHLHI*LCLTST
Trigger: GGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT...GTTTCTGGCTTCACCTCTGACCTTCGATCCTTCTGTTGTGGAAATATTTCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTGGTTGGATCCATGGTTaGCGAGCTTTTGACAGCATC +
Preference number: 4 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCGWIHG*RAFDSI
Trigger: GATGCTGTCAAAAGCTCGGCAACCATGGATCCAACC...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR GCA 90 bp TTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCCCACTGGTAGAGAACTaGCAAACCTGTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LWGREEWFSTGMFPNNVPPLVEN*QTCSPK
Trigger: CTTTGGAGAACAGGTTTGGCAGTTCTCTACCAGTGG...GGGAACGTTATTTGGAAACATTCCTGTGGAAAACCACTCTTCTCTTCCCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp ATACCATGTAACTGCACAAGACTCCACTTGCTGAAGCTCTTCAGCAACCTGTTGTCGCATTGTGCCAAGTaGTACTGTCACTTCATCATC +
Preference number: 4 (lower is better)
Translates to: IPCNCTRLHLLKLFSNLLSHCAK*YCHFII
Trigger: GATGATGAAGTGACAGTACCACTTGGCACAATGCGA...CAACAGGTTGCTGAAGAGCTTCAGCAAGTGGAGTCTTGTGCAGTTACATGGTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CCA 90 bp GTTCAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGATGACTTATCAAAAGTaGGTATTACAACCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: VQIQGLLTPRPTILISTGMTYQK*VLQPAV
Trigger: CACCGCTGGTTGTAATACCCACTTTTGATAAGTCAT...CCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
3UTR CAA 72 bp GAAAAGAGAACGCTGGCTAATTTTGATGGGAGCAACTaGACGGAAGTTGGTACAATAAGCAGAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: EKRTLANFDGSN*TEVGTISREAP
Trigger: TGGTGCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGTTCTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCTTTTCCAGTGAAGTCTaGAGAGCACTAGGTCATTAT +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCFSSEV*RALGHY
Trigger: ATAATGACCTAGTGCTCTTCAGACTTCACTGGAAAA...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCCTGCTTTTTCTTCATTaGCATGCTCAGAACTTATGC +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCLLFLH*HAQNLC
Trigger: GCATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAG...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAACTTATGAGGCACTCTaGCAATCTTCGGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRTYEAL*QSSVSL
Trigger: CAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGT...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp AGTTTTTCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTAATCGAAGGTCAGAGGTaGAGCCAGAAACAAAACATC +
Preference number: 4 (lower is better)
Translates to: SFSISLRSRMDFKESPPLIEGQR*SQKQNI
Trigger: GATGTTTTGTTTCTGGCTTCACCTCTGACCTTCGAT...TAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TCAGGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTCTGAGAACTGTCAATaGTGGAAACGCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: SGTLKRSSGRFRVDFHKYSENCQ*WKRFTT
Trigger: GGTGGTGAAGCGTTTCCATCATTGACAGTTCTCAGA...GTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGCTCCTCTCCAGCTTCTaGGAACTGTCAATGATGGAA +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQLLSSF*ELSMME
Trigger: TTCCATCATTGACAGTTCTCAGAAGCTGGAGAGGAG...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTAATGGTCGCCCAACTTaGTACCTCTGTGATACCATA +
Preference number: 4 (lower is better)
Translates to: SLRSRMDFKESPPLFKKSNGRPT*YLCDTI
Trigger: TATGGTATCACAGAGGTATCAAGTTGGGCGACCATT...ACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGGCCACTGCCTTCCTaGATTGTGAAGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRWPLPS*IVKPLV
Trigger: TACTAATGGCTTCACAATTCAGGAAGGCAGTGGCCA...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCCAAGACTCCACTTGCTaGAGCTCTTCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIQDSTC*SSSATC
Trigger: ACAGGTTGCTGAAGAGCTTCAGCAAGTGGAGTCTTG...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp TTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCGTTTTTCAATCTCACTaGGGAGCCGGATGGACTTTA +
Preference number: 4 (lower is better)
Translates to: LWGREEWFSTGMFPNNVPVFQSH*GAGWTL
Trigger: TAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAAC...GGGAACGTTATTTGGAAACATTCCTGTGGAAAACCACTCTTCTCTTCCCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AGTTTTTCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTACAGAAGCCCAGGTACTaGTGTACCAACAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SFSISLRSRMDFKESPPLQKPRY*CTNKFF
Trigger: GAAAAACTTGTTGGTACATCAGTACCTGGGCTTCTG...TAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGCCACTGGCTTCCTCTTaGTTAATGTCGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQPLASS*LMSLSF
Trigger: GAAACTCAGCGACATTAATCAAGAGGAAGCCAGTGG...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TCAGGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACCCACTGGCTTCCTCTTaGTTAATGTCGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGTLKRSSGRFRVDFHKYPLASS*LMSLSF
Trigger: GAAACTCAGCGACATTAATCAAGAGGAAGCCAGTGG...GTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGAGGCACCACTTACAGGATGGATCTTTTaGCTTCCCAATAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: FDGSNLTEVGTISREAPLTGWIF*LPNKNW
Trigger: CCAGTTCTTATTGGGAAGTCAAAAGATCCATCCTGT...AAGTGGTGCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTTGTAACTCCATTTTCTaGGTCCCTATCGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SLRSRMDFKESPPLFKKSCNSIF*VPIAGF
Trigger: GAAACCTGCGATAGGGACTCAGAAAATGGAGTTACA...ACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGTATTACAACCAGCGGTaGAGCATCTACACATTTGCC +
Preference number: 4 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLYYNQR*SIYTFA
Trigger: GGCAAATGTGTAGATGCTTCACCGCTGGTTGTAATA...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGATATTACAACCAGCGGTaGAGCATCTACACATTTGCC +
Preference number: 4 (lower is better)
Translates to: TLANFDGSNLTEVGTISRYYNQR*SIYTFA
Trigger: GGCAAATGTGTAGATGCTTCACCGCTGGTTGTAATA...TCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGTGCAATTGTCCACTCTaGGATTCCAAGATCCACACT +
Preference number: 4 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLCNCPL*DSKIHT
Trigger: AGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCA...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGGGGAAAAGAGAACGCTaGCTAATTTTGATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLGKRER*LILMGA
Trigger: TGCTCCCATCAAAATTAGCCAGCGTTCTCTTTTCCC...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp ACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGGGAAAAGAGAACGCTaGCTAATTTTGATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TLANFDGSNLTEVGTISRGKRER*LILMGA
Trigger: TGCTCCCATCAAAATTAGCCAGCGTTCTCTTTTCCC...TCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp CACAGTCACAAAGTCTCCTGTAGCTCGCATTGTGCCAAGTGGTACTGTCACTTCGCATTAATCTCATTGTaGCAAGTGAAAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: HSHKVSCSSHCAKWYCHFALISL*QVKVMM
Trigger: CATCATGACTTTCACTTGCCACAATGAGATTAATGC...GAAGTGACAGTACCACTTGGCACAATGCGAGCTACAGGAGACTTTGTGACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CCA 90 bp CACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCATGACTTATCAAAAGTaGGTATTACAACCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: HICLCLTSTSHVTPFSESMTYQK*VLQPAV
Trigger: CACCGCTGGTTGTAATACCCACTTTTGATAAGTCAT...GGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAAAACATCTTCTTGTGTaGTGTCAAAAAGTACCCGAA +
Preference number: 4 (lower is better)
Translates to: QIQGLLTPRPTILISTGLKHLLV*CQKVPE
Trigger: TTCGGGTACTTTTTGACATCACACAAGAAGATGTTT...TAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGAAAACAGTCACTCTATaGTGGGAAAAGAGAACGCTG +
Preference number: 4 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLKTVTL*WEKRTL
Trigger: CAGCGTTCTCTTTTCCCATCATAGAGTGACTGTTTT...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AATTCCCATCTACACAGCCAATACAAATATACTGTGAGCAACATTGTGGGGAAGTCTGAGAACTGTCAATaGTGGAAACGCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: NSHLHSQYKYTVSNIVGKSENCQ*WKRFTT
Trigger: GGTGGTGAAGCGTTTCCATCATTGACAGTTCTCAGA...CTTCCCCACAATGTTGCTCACAGTATATTTGTATTGGCTGTGTAGATGGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAATCATGGGAACCAAACTCCTCTCCAGCTTCTaGGAACTGTCAATGATGGAA +
Preference number: 4 (lower is better)
Translates to: LQVTFHVTTVDKAIMGTKLLSSF*ELSMME
Trigger: TTCCATCATTGACAGTTCTCAGAAGCTGGAGAGGAG...TTTGGTTCCCATGATTGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGAATGGTCGCCCAACTTaGTACCTCTGTGATACCATA +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQNGRPT*YLCDTI
Trigger: TATGGTATCACAGAGGTATCAAGTTGGGCGACCATT...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAGTTTGCCATGACGTTTaGTCTGACTGTCTTTTCGTC +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRVCHDV*SDCLFV
Trigger: GACGAAAAGACAGTCAGATCAAACGTCATGGCAAAC...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCACAAGACTCCACTTGCTaGAGCTCTTCAGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPQDSTC*SSSATC
Trigger: ACAGGTTGCTGAAGAGCTTCAGCAAGTGGAGTCTTG...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCTCATCCGGGACTGCATaGCTTGGAAGATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPISSGTA*LGRYFC
Trigger: GCAGAAATATCTTCCAAGTCATGCAGTCCCGGATGA...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CAGCCCACCACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTTCATCCGGGACTGCATaGCTTGGAAGATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: QPTTIKFPHLDTHAEDSISSGTA*LGRYFC
Trigger: GCAGAAATATCTTCCAAGTCATGCAGTCCCGGATGA...AATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR TCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTGTTTTTCAATCTCACTaGGGAGCCGGATGGACTTTA +
Preference number: 4 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCVFQSH*GAGWTL
Trigger: TAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAAC...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGGTCATGATGGCTTTCTaGTGTAAAGATGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SISLRSRMDFKESPPLFKVMMAF*CKDVPL
Trigger: CAGTGGAACATCTTTACATCAGAAAGCCATCATGAC...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp GGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTCAGAGACAAAATTTaGCTCCCTCTGCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: GTLDPKAHNINQHRVNYNFRDKI*LPLLST
Trigger: TGTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAA...ATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp GCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGTTCAGAGACAAAATTTaGCTCCCTCTGCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: AGWTLRNLHHYLRRVTHQFRDKI*LPLLST
Trigger: TGTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAA...CTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAACAGGATGGATCTTTTaGCTTCCCAATAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: TLANFDGSNLTEVGTISRTGWIF*LPNKNW
Trigger: CCAGTTCTTATTGGGAAGTCAAAAGATCCATCCTGT...TCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCGTACACAGTTGTAGATaGCTTATCAAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCVHSCR*LIKSGY
Trigger: ATACCCACTTTTGATAAGTCATCTACAACTGTGTAC...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCCTTAGATACACATGCTaGGGATTCAATTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: LWGREEWFSTGMFPNNVPLRYTC*GFNSIS
Trigger: GGAGATCGAATTGAATCCTCAGCATGTGTATCTAAG...GGGAACGTTATTTGGAAACATTCCTGTGGAAAACCACTCTTCTCTTCCCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGAGGCACCACTTACCTGTTCTCCAAAGTaGGTAAAGCAGAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: FDGSNLTEVGTISREAPLTCSPK*VKQSKF
Trigger: GAATTTACTCTGCTTTACTCACTTTGGAGAACAGGT...AAGTGGTGCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp GTTCAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGAGAGTAAAAGTCAACTaGCTTCATTCTATGAGAATG +
Preference number: 4 (lower is better)
Translates to: VQIQGLLTPRPTILISTGRVKVN*LHSMRM
Trigger: CATTCTCATAGAATGAAGGCAGTTGACTTTTACTCT...CCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATTTCCCATCAGTAGATaGTGCTGCCAGCAACATTTC +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRFPISR*CCQQHF
Trigger: GAAATGTTGCTGGCAGCAGCATCTACTGATGGGAAA...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGGGGAAAAGAGAACGCTaGCTAATTTTGATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQGKRER*LILMGA
Trigger: TGCTCCCATCAAAATTAGCCAGCGTTCTCTTTTCCC...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATCGCATTGTGCCAAGTaGTACTGTCACTTCATCATC +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRSHCAK*YCHFII
Trigger: GATGATGAAGTGACAGTACCACTTGGCACAATGCGA...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR CCA 90 bp CCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGGGACTTCGCATTGTGCCAAGTaGTACTGTCACTTCATCATC +
Preference number: 4 (lower is better)
Translates to: PKVTEFIIAIQVGSNPGTSHCAK*YCHFII
Trigger: GATGATGAAGTGACAGTACCACTTGGCACAATGCGA...AGTCCCTGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
3UTR CAA 72 bp ATGAGTCCTGTGGTTGGATCCATGGTTGCCGAGCTTTaGACAGCATCTTCAGTAGTAAACATCCAGTATTTT +
Preference number: 4 (lower is better)
Translates to: MSPVVGSMVAEL*TASSVVNIQYF
Trigger: AAAATACTGGATGTTTACTACTGAAGATGCTGTCAAAAGCTCGGCAACCATGGATCCAACCACAGGACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR TCA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGTTATGCACCAATTCCTaGAGAGTCATTTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: SISLRSRMDFKESPPLFKLCTNS*RVISLK
Trigger: CTTCAGTGAAATGACTCTTCAGGAATTGGTGCATAA...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTCTGCTTTTTCTTCATTaGCATGCTCAGAACTTATGC +
Preference number: 4 (lower is better)
Translates to: SLRSRMDFKESPPLFKKSLLFLH*HAQNLC
Trigger: GCATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAG...ACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp CCACAGGAATGTTTCCAAATAACGTTCCCAGTAGCAGGATTTACAGCCAGTAAAGGTACTATACACTTATaGGGCACTCTGACAATCTTC +
Preference number: 4 (lower is better)
Translates to: PQECFQITFPVAGFTASKGTIHL*GTLTIF
Trigger: GAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACC...TTTACTGGCTGTAAATCCTGCTACTGGGAACGTTATTTGGAAACATTCCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp GACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAATCGAAGGTCAGAGGTaGAGCCAGAAACAAAACATC +
Preference number: 4 (lower is better)
Translates to: DPKAHNINQHRVNYNFWTIEGQR*SQKQNI
Trigger: GATGTTTTGTTTCTGGCTTCACCTCTGACCTTCGAT...TGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAAAAACAGTCACTCTATaGTGGGAAAAGAGAACGCTG +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRKTVTL*WEKRTL
Trigger: CAGCGTTCTCTTTTCCCATCATAGAGTGACTGTTTT...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGGGACTAAAACAGTCACTCTATaGTGGGAAAAGAGAACGCTG +
Preference number: 4 (lower is better)
Translates to: PKVTEFIIAIQVGSNPGTKTVTL*WEKRTL
Trigger: CAGCGTTCTCTTTTCCCATCATAGAGTGACTGTTTT...AGTCCCTGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCATCATCCGGGACTGCATaGCTTGGAAGATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: RPTILISTGLTIIFGQQPSSGTA*LGRYFC
Trigger: GCAGAAATATCTTCCAAGTCATGCAGTCCCGGATGA...TGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCGTTTTTCAATCTCACTaGGGAGCCGGATGGACTTTA +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIVFQSH*GAGWTL
Trigger: TAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAAC...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAGTCATGATGGCTTTCTaGTGTAAAGATGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRVMMAF*CKDVPL
Trigger: CAGTGGAACATCTTTACATCAGAAAGCCATCATGAC...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGACAGGATGGATCTTTTaGCTTCCCAATAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQTGWIF*LPNKNW
Trigger: CCAGTTCTTATTGGGAAGTCAAAAGATCCATCCTGT...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCTGTAACTCCATTTTCTaGGTCCCTATCGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPICNSIF*VPIAGF
Trigger: GAAACCTGCGATAGGGACTCAGAAAATGGAGTTACA...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGAGGCACCACTTGTACACAGTTGTAGATaGCTTATCAAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: FDGSNLTEVGTISREAPLVHSCR*LIKSGY
Trigger: ATACCCACTTTTGATAAGTCATCTACAACTGTGTAC...AAGTGGTGCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGACTTAGATACACATGCTaGGGATTCAATTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRLRYTC*GFNSIS
Trigger: GGAGATCGAATTGAATCCTCAGCATGTGTATCTAAG...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGGGACTCTTAGATACACATGCTaGGGATTCAATTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: PKVTEFIIAIQVGSNPGTLRYTC*GFNSIS
Trigger: GGAGATCGAATTGAATCCTCAGCATGTGTATCTAAG...AGTCCCTGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAAATTTCCACTGCAGGTaGCCTTTCATGTTACAACAG +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRNFHCR*PFMLQQ
Trigger: CTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATT...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGGAACCCAATTTCCACTGCAGGTaGCCTTTCATGTTACAACAG +
Preference number: 4 (lower is better)
Translates to: WTLRNLHHYLRRVTHQEPNFHCR*PFMLQQ
Trigger: CTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATT...GGGTTCCTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp CCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGGGACTAAGCTCATCCGGGACTaGATGACTTGGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: PKVTEFIIAIQVGSNPGTKLIRD*MTWKIF
Trigger: AAATATCTTCCAAGTCATGCAGTCCCGGATGAGCTT...AGTCCCTGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTAAGCTCATCCGGGACTaGATGACTTGGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCKLIRD*MTWKIF
Trigger: AAATATCTTCCAAGTCATGCAGTCCCGGATGAGCTT...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGATCAGTAGATGCTGCTaGCAGCAACATTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQISRCC*QQHFIA
Trigger: AGCAATGAAATGTTGCTGGCAGCAGCATCTACTGAT...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR GCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAATCAGTAGATGCTGCTaGCAGCAACATTTCATTGCT +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRISRCC*QQHFIA
Trigger: AGCAATGAAATGTTGCTGGCAGCAGCATCTACTGAT...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR GCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCCCACTGGTAGAGAACTaGCAAACCCACCACAATAAA +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIPLVEN*QTHHNK
Trigger: TTTATTGTGGTGGGTTTGGCAGTTCTCTACCAGTGG...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR CCA 90 bp CCACAGGAATGTTTCCAAATAACGTTCCCAGTAGCAGGATTTACAGCCAGTAAAGTAGGTGTAGTAAACTaGAAGCTGGTTGTTGCATTC +
Preference number: 4 (lower is better)
Translates to: PQECFQITFPVAGFTASKVGVVN*KLVVAF
Trigger: GAATGCAACAACCAGCTTCCAGTTTACTACACCTAC...TTTACTGGCTGTAAATCCTGCTACTGGGAACGTTATTTGGAAACATTCCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCCAACTTGACGGAAGTTaGTACAATAAGCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIQLDGS*YNKQRG
Trigger: GCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTG...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp ACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGATCTTCTAAGCAATGTTaGTGTTGCCTGCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: TLANFDGSNLTEVGTISRSSKQC*CCLQNS
Trigger: ACTGTTTTGCAGGCAACACCAACATTGCTTAGAAGA...TCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGACTGGAATCCTATAAATaGTCGCCCAACTTGATACCT +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRLESYK*SPNLIP
Trigger: AGGTATCAAGTTGGGCGACCATTTATAGGATTCCAG...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp CCACAGGAATGTTTCCAAATAACGTTCCCAGTAGCAGGATTTACAGCCAGTAAACTGGAATCCTATAAATaGTCGCCCAACTTGATACCT +
Preference number: 4 (lower is better)
Translates to: PQECFQITFPVAGFTASKLESYK*SPNLIP
Trigger: AGGTATCAAGTTGGGCGACCATTTATAGGATTCCAG...TTTACTGGCTGTAAATCCTGCTACTGGGAACGTTATTTGGAAACATTCCTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGGTTAAGAGTCTTCTCTaGAATCCTATAAATGGTCGC +
Preference number: 4 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLVKSLL*NPINGR
Trigger: GCGACCATTTATAGGATTCCAGAGAAGACTCTTAAC...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp CCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGGGACTTACTGTTCCAAGAAGTaGAAATCCCAGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: PKVTEFIIAIQVGSNPGTYCSKK*KSQLYR
Trigger: CCTGTACAACTGGGATTTCCACTTCTTGGAACAGTA...AGTCCCTGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp AAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTATGACTTATCAAAAGTaGGTATTACAACCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: KHLHICLCLTSTSHVTPFMTYQK*VLQPAV
Trigger: CACCGCTGGTTGTAATACCCACTTTTGATAAGTCAT...AAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTTATGCACCAATTCCTaGAGAGTCATTTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQLCTNS*RVISLK
Trigger: CTTCAGTGAAATGACTCTTCAGGAATTGGTGCATAA...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCATTTCCCGAATTCCTTaGAAGTCACAGTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIISRIP*KSQCNS
Trigger: GCTGTTACACTGTGACTTTCAAGGAATTCGGGAAAT...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AATTCCCATCTACACAGCCAATACAAATATACTGTGAGCAACATTGTGGGGAAGTCAGTATTTTTCCAGTaGAGTCTGAAGAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: NSHLHSQYKYTVSNIVGKSVFFQ*SLKSTR
Trigger: CCTAGTGCTCTTCAGACTTCACTGGAAAAATACTGA...CTTCCCCACAATGTTGCTCACAGTATATTTGTATTGGCTGTGTAGATGGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp ACTTCTTTCTCCACCACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATATCGAAGGTCAGAGGTaGAGCCAGAAACAAAACATC +
Preference number: 4 (lower is better)
Translates to: TSFSTTIKFPHLDTHAEDIEGQR*SQKQNI
Trigger: GATGTTTTGTTTCTGGCTTCACCTCTGACCTTCGAT...ATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGAGAAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAATGGCCACTGCCTTCCTaGATTGTGAAGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKWPLPS*IVKPLV
Trigger: TACTAATGGCTTCACAATTCAGGAAGGCAGTGGCCA...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AAAATACAAATGATGTGGAATCAGGTTCAAACACGGAGAGGAAAAGACAGTTCCGTTTGCCATGACGTTTaGTCTGACTGTCTTTTCGTC +
Preference number: 4 (lower is better)
Translates to: KIQMMWNQVQTRRGKDSSVCHDV*SDCLFV
Trigger: GACGAAAAGACAGTCAGATCAAACGTCATGGCAAAC...GGAACTGTCTTTTCCTCTCCGTGTTTGAACCTGATTCCACATCATTTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCACAGAAGCCCAGGTACTaGTGTACCAACAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPQKPRY*CTNKFF
Trigger: GAAAAACTTGTTGGTACATCAGTACCTGGGCTTCTG...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp ACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCCAGAAGCCCAGGTACTaGTGTACCAACAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TIKFPHLDTHAEDSIRSPQKPRY*CTNKFF
Trigger: GAAAAACTTGTTGGTACATCAGTACCTGGGCTTCTG...GGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACCCACTGGCTTCCTCTTaGTTAATGTCGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTILISTGLTIIFGQQPNPLASS*LMSLSF
Trigger: GAAACTCAGCGACATTAATCAAGAGGAAGCCAGTGG...GTTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCATATTACAACCAGCGGTaGAGCATCTACACATTTGCC +
Preference number: 4 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPYYNQR*SIYTFA
Trigger: GGCAAATGTGTAGATGCTTCACCGCTGGTTGTAATA...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AAAATACAAATGATGTGGAATCAGGTTCAAACACGGAGAGGAAAAGACAGTTCCTATTACAACCAGCGGTaGAGCATCTACACATTTGCC +
Preference number: 4 (lower is better)
Translates to: KIQMMWNQVQTRRGKDSSYYNQR*SIYTFA
Trigger: GGCAAATGTGTAGATGCTTCACCGCTGGTTGTAATA...GGAACTGTCTTTTCCTCTCCGTGTTTGAACCTGATTCCACATCATTTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGTGTTGCATAGACCCTTaGAGTAGTTTCAAATTTCCA +
Preference number: 4 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLCCIDP*SSFKFP
Trigger: TGGAAATTTGAAACTACTTCAAGGGTCTATGCAACA...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCTGCAATTGTCCACTCTaGGATTCCAAGATCCACACT +
Preference number: 4 (lower is better)
Translates to: TIKFPHLDTHAEDSIRSPCNCPL*DSKIHT
Trigger: AGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCA...GGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR TCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCACCCAATAATGAGCATTaGTTCCAGGACCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAPNNEH*FQDHRR
Trigger: TCTCCTGTGGTCCTGGAATCAATGCTCATTATTGGG...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR GCA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGACTGGAAGCTGGTTGTTaGATTCATCAAAACATACAG +
Preference number: 4 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRLEAGC*IHQNIQ
Trigger: CTGTATGTTTTGATGAATGCAACAACCAGCTTCCAG...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR GCA 90 bp TCAGGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACCTGGAAGCTGGTTGTTaGATTCATCAAAACATACAG +
Preference number: 4 (lower is better)
Translates to: SGTLKRSSGRFRVDFHKYLEAGC*IHQNIQ
Trigger: CTGTATGTTTTGATGAATGCAACAACCAGCTTCCAG...GTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp CCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGGGACTATTATACCATGTAACTaGACAAGACTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PKVTEFIIAIQVGSNPGTIIPCN*TRLHLL
Trigger: CAGCAAGTGGAGTCTTGTGCAGTTACATGGTATAAT...AGTCCCTGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTATTATACCATGTAACTaGACAAGACTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCIIPCN*TRLHLL
Trigger: CAGCAAGTGGAGTCTTGTGCAGTTACATGGTATAAT...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AGTTTTTCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTAAAATTTGACTCCCTCTaGTCAGTACAACAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SFSISLRSRMDFKESPPLKFDSL*SVQQKH
Trigger: ATGCTTTTGTTGTACTGAGCAGAGGGAGTCAAATTT...TAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAAAGCATCTACACATTTaGCTGTGTCTGACCTCCACC +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAKHLHI*LCLTST
Trigger: GGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAAAAGCATCTACACATTTaGCTGTGTCTGACCTCCACC +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKKHLHI*LCLTST
Trigger: GGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp AGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAGGGAAAAGAGAACGCTaGCTAATTTTGATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPTILISTGLTIIFGQQPGKRER*LILMGA
Trigger: TGCTCCCATCAAAATTAGCCAGCGTTCTCTTTTCCC...TGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp GACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACACTGGAATCCTATAAATaGTCGCCCAACTTGATACCT +
Preference number: 4 (lower is better)
Translates to: DPKAHNINQHRVNYNFWTLESYK*SPNLIP
Trigger: AGGTATCAAGTTGGGCGACCATTTATAGGATTCCAG...TGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp TCAGGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACGTTAAGAGTCTTCTCTaGAATCCTATAAATGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGTLKRSSGRFRVDFHKYVKSLL*NPINGR
Trigger: GCGACCATTTATAGGATTCCAGAGAAGACTCTTAAC...GTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTACATCAATTTTGCCGTaGGATGTAAATGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCTSILP*DVNGRE
Trigger: CTCTCTACCATTTACATCCCACGGCAAAATTGATGT...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGATGACTTATCAAAAGTaGGTATTACAACCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQMTYQK*VLQPAV
Trigger: CACCGCTGGTTGTAATACCCACTTTTGATAAGTCAT...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAGGTACTATACACTTATaGGGCACTCTGACAATCTTC +
Preference number: 4 (lower is better)
Translates to: RPTILISTGLTIIFGQQPGTIHL*GTLTIF
Trigger: GAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACC...TGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGAAACATCTTCTTGTGTaGTGTCAAAAAGTACCCGAA +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQKHLLV*CQKVPE
Trigger: TTCGGGTACTTTTTGACATCACACAAGAAGATGTTT...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR TCA 90 bp TGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGGAACCCAAACATCTTCTTGTGTaGTGTCAAAAAGTACCCGAA +
Preference number: 4 (lower is better)
Translates to: WTLRNLHHYLRRVTHQEPKHLLV*CQKVPE
Trigger: TTCGGGTACTTTTTGACATCACACAAGAAGATGTTT...GGGTTCCTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAATCGAAGGTCAGAGGTaGAGCCAGAAACAAAACATC +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAIEGQR*SQKQNI
Trigger: GATGTTTTGTTTCTGGCTTCACCTCTGACCTTCGAT...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAAATGGTCGCCCAACTTaGTACCTCTGTGATACCATA +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKANGRPT*YLCDTI
Trigger: TATGGTATCACAGAGGTATCAAGTTGGGCGACCATT...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAGTCATGATGGCTTTCTaGTGTAAAGATGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: RPTILISTGLTIIFGQQPVMMAF*CKDVPL
Trigger: CAGTGGAACATCTTTACATCAGAAAGCCATCATGAC...TGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AACTCAGAAACATCAATTTTGCCGTGGGATGTAAATGGTAGAGAGTCGATCAATGTCATGATGGCTTTCTaGTGTAAAGATGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: NSETSILPWDVNGRESINVMMAF*CKDVPL
Trigger: CAGTGGAACATCTTTACATCAGAAAGCCATCATGAC...ATTGATCGACTCTCTACCATTTACATCCCACGGCAAAATTGATGTTTCTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp ACTTCTTTCTCCACCACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTTCAGAGACAAAATTTaGCTCCCTCTGCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: TSFSTTIKFPHLDTHAEDFRDKI*LPLLST
Trigger: TGTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAA...ATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGAGAAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAATGTAACTCCATTTTCTaGGTCCCTATCGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKCNSIF*VPIAGF
Trigger: GAAACCTGCGATAGGGACTCAGAAAATGGAGTTACA...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGGTACACAGTTGTAGATaGCTTATCAAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQVHSCR*LIKSGY
Trigger: ATACCCACTTTTGATAAGTCATCTACAACTGTGTAC...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AACTCAGAAACATCAATTTTGCCGTGGGATGTAAATGGTAGAGAGTCGATCAATCTTAGATACACATGCTaGGGATTCAATTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: NSETSILPWDVNGRESINLRYTC*GFNSIS
Trigger: GGAGATCGAATTGAATCCTCAGCATGTGTATCTAAG...ATTGATCGACTCTCTACCATTTACATCCCACGGCAAAATTGATGTTTCTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTTGTTGCATAGACCCTTaGAGTAGTTTCAAATTTCCA +
Preference number: 4 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCCCIDP*SSFKFP
Trigger: TGGAAATTTGAAACTACTTCAAGGGTCTATGCAACA...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAAAGCAATGTTGGTGTTaGCTGCAAAACAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPKQCWC*LQNSHS
Trigger: AGAGTGACTGTTTTGCAGGCAACACCAACATTGCTT...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTCTTCAGCAACCTGTTaGACAAGTTCAATGTTAAGA +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQSSATC*TSSMLR
Trigger: TCTTAACATTGAACTTGTGCAACAGGTTGCTGAAGA...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR GCA 90 bp AATTCCCATCTACACAGCCAATACAAATATACTGTGAGCAACATTGTGGGGAAGATTATACCATGTAACTaGACAAGACTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: NSHLHSQYKYTVSNIVGKIIPCN*TRLHLL
Trigger: CAGCAAGTGGAGTCTTGTGCAGTTACATGGTATAAT...CTTCCCCACAATGTTGCTCACAGTATATTTGTATTGGCTGTGTAGATGGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGAAATTTGACTCCCTCTaGTCAGTACAACAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQKFDSL*SVQQKH
Trigger: ATGCTTTTGTTGTACTGAGCAGAGGGAGTCAAATTT...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR GCA 90 bp ACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAAGAGTAAAAGTCAACTaGCTTCATTCTATGAGAATG +
Preference number: 4 (lower is better)
Translates to: TLANFDGSNLTEVGTISRRVKVN*LHSMRM
Trigger: CATTCTCATAGAATGAAGGCAGTTGACTTTTACTCT...TCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGGCAACATTTCATTGCTaGCATTGTAGTTATGGAAAG +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQATFHC*HCSYGK
Trigger: CTTTCCATAACTACAATGGCAGCAATGAAATGTTGC...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp TTTTTCCCAAAGGTCCTCTTTCCCACTGAGCTTATTCTCAGACTTCAAGTTTATTACTGTTCCAAGAAGTaGAAATCCCAGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: FFPKVLFPTELILRLQVYYCSKK*KSQLYR
Trigger: CCTGTACAACTGGGATTTCCACTTCTTGGAACAGTA...ATAAACTTGAAGTCTGAGAATAAGCTCAGTGGGAAAGAGGACCTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CCA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGGCATTAATCTCATTGTaGCAAGTGAAAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQALISL*QVKVMM
Trigger: CATCATGACTTTCACTTGCCACAATGAGATTAATGC...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp TCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTTCAAATTTTGAATGTTaGTCTGTGAAACTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SLRSRMDFKESPPLFKKSSNFEC*SVKLSQ
Trigger: CTGACTCAGTTTCACAGACCAACATTCAAAATTTGA...ACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
3UTR CAA 72 bp GACTTCAACTACTGTTCCAAGAAGTGGAAATCCCAGTaGTACAGGCAATTCACATTTGAGAGTAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: DFNYCSKKWKSQ*YRQFTFESRVK
Trigger: CTTAACTCTACTCTCAAATGTGAATTGCCTGTACAACTGGGATTTCCACTTCTTGGAACAGTAGTTGAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR TCA 90 bp CCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACTCAGTATTTTTCCAGTaGAGTCTGAAGAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: PTILISTGLTIIFGQQPNSVFFQ*SLKSTR
Trigger: CCTAGTGCTCTTCAGACTTCACTGGAAAAATACTGA...GTTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPVDLIS*DPNLLS
Trigger: GCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAAC...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCAAAATCGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: KFPHLDTHAEDSIRSPKIVDLIS*DPNLLS
Trigger: GCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAAC...GATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCATTCAGAGACAAAATTTaGCTCCCTCTGCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAFRDKI*LPLLST
Trigger: TGTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAA...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACACAGGATGGATCTTTTaGCTTCCCAATAAGAACTGG +
Preference number: 4 (lower is better)
Translates to: PTILISTGLTIIFGQQPNTGWIF*LPNKNW
Trigger: CCAGTTCTTATTGGGAAGTCAAAAGATCCATCCTGT...GTTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAAAGCAATGTTGGTGTTaGCTGCAAAACAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAKQCWC*LQNSHS
Trigger: AGAGTGACTGTTTTGCAGGCAACACCAACATTGCTT...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp GACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACATCTTCAGCAACCTGTTaGACAAGTTCAATGTTAAGA +
Preference number: 4 (lower is better)
Translates to: DPKAHNINQHRVNYNFWTSSATC*TSSMLR
Trigger: TCTTAACATTGAACTTGTGCAACAGGTTGCTGAAGA...TGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp AATTCCCATCTACACAGCCAATACAAATATACTGTGAGCAACATTGTGGGGAAGTCTTCAGCAACCTGTTaGACAAGTTCAATGTTAAGA +
Preference number: 4 (lower is better)
Translates to: NSHLHSQYKYTVSNIVGKSSATC*TSSMLR
Trigger: TCTTAACATTGAACTTGTGCAACAGGTTGCTGAAGA...CTTCCCCACAATGTTGCTCACAGTATATTTGTATTGGCTGTGTAGATGGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR GCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCGCAACATTTCATTGCTaGCATTGTAGTTATGGAAAG +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIATFHC*HCSYGK
Trigger: CTTTCCATAACTACAATGGCAGCAATGAAATGTTGC...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAGTAGGTGTAGTAAACTaGAAGCTGGTTGTTGCATTC +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAVGVVN*KLVVAF
Trigger: GAATGCAACAACCAGCTTCCAGTTTACTACACCTAC...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAAGTAGGTGTAGTAAACTaGAAGCTGGTTGTTGCATTC +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKVGVVN*KLVVAF
Trigger: GAATGCAACAACCAGCTTCCAGTTTACTACACCTAC...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp AGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCATCTTCTAAGCAATGTTaGTGTTGCCTGCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: RPTILISTGLTIIFGQQPSSKQC*CCLQNS
Trigger: ACTGTTTTGCAGGCAACACCAACATTGCTTAGAAGA...TGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp AAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCAAAATCTCTTCTAAGCAATGTTaGTGTTGCCTGCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: KFPHLDTHAEDSIRSPKISSKQC*CCLQNS
Trigger: ACTGTTTTGCAGGCAACACCAACATTGCTTAGAAGA...GATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGTTAAGAGTCTTCTCTaGAATCCTATAAATGGTCGC +
Preference number: 4 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPVKSLL*NPINGR
Trigger: GCGACCATTTATAGGATTCCAGAGAAGACTCTTAAC...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCATACTGTTCCAAGAAGTaGAAATCCCAGTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAYCSKK*KSQLYR
Trigger: CCTGTACAACTGGGATTTCCACTTCTTGGAACAGTA...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000503808.5
CDS-3UTR CCA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAACATCAATTTTGCCGTaGGATGTAAATGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPTSILP*DVNGRE
Trigger: CTCTCTACCATTTACATCCCACGGCAAAATTGATGT...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp AACTCAGAAACATCAATTTTGCCGTGGGATGTAAATGGTAGAGAGTCGATCAATACATCAATTTTGCCGTaGGATGTAAATGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: NSETSILPWDVNGRESINTSILP*DVNGRE
Trigger: CTCTCTACCATTTACATCCCACGGCAAAATTGATGT...ATTGATCGACTCTCTACCATTTACATCCCACGGCAAAATTGATGTTTCTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp GACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCATTAATCTCATTGTaGCAAGTGAAAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: DPKAHNINQHRVNYNFWTALISL*QVKVMM
Trigger: CATCATGACTTTCACTTGCCACAATGAGATTAATGC...TGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CCA 90 bp CTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAATCATGGGAACCAAAGCATTAATCTCATTGTaGCAAGTGAAAGTCATGATG +
Preference number: 4 (lower is better)
Translates to: LQVTFHVTTVDKAIMGTKALISL*QVKVMM
Trigger: CATCATGACTTTCACTTGCCACAATGAGATTAATGC...TTTGGTTCCCATGATTGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp TGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGGAACCCTCAAATTTTGAATGTTaGTCTGTGAAACTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: WTLRNLHHYLRRVTHQEPSNFEC*SVKLSQ
Trigger: CTGACTCAGTTTCACAGACCAACATTCAAAATTTGA...GGGTTCCTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCATTATGCACCAATTCCTaGAGAGTCATTTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKALCTNS*RVISLK
Trigger: CTTCAGTGAAATGACTCTTCAGGAATTGGTGCATAA...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp CCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACTTTTCCAGTGAAGTCTaGAGAGCACTAGGTCATTAT +
Preference number: 4 (lower is better)
Translates to: PTILISTGLTIIFGQQPNFSSEV*RALGHY
Trigger: ATAATGACCTAGTGCTCTTCAGACTTCACTGGAAAA...GTTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCATTTTCCAGTGAAGTCTaGAGAGCACTAGGTCATTAT +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAFSSEV*RALGHY
Trigger: ATAATGACCTAGTGCTCTTCAGACTTCACTGGAAAA...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000503808.5
CDS-3UTR TCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACTGCTTTTTCTTCATTaGCATGCTCAGAACTTATGC +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKLLFLH*HAQNLC
Trigger: GCATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAG...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR TCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAVDLIS*DPNLLS
Trigger: GCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAAC...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR TCA 90 bp TTTTTCCCAAAGGTCCTCTTTCCCACTGAGCTTATTCTCAGACTTCAAGTTTATTGTTGCATAGACCCTTaGAGTAGTTTCAAATTTCCA +
Preference number: 4 (lower is better)
Translates to: FFPKVLFPTELILRLQVYCCIDP*SSFKFP
Trigger: TGGAAATTTGAAACTACTTCAAGGGTCTATGCAACA...ATAAACTTGAAGTCTGAGAATAAGCTCAGTGGGAAAGAGGACCTTTGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACTGGAAGCTGGTTGTTaGATTCATCAAAACATACAG +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKLEAGC*IHQNIQ
Trigger: CTGTATGTTTTGATGAATGCAACAACCAGCTTCCAG...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAATTATACCATGTAACTaGACAAGACTCCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAIIPCN*TRLHLL
Trigger: CAGCAAGTGGAGTCTTGTGCAGTTACATGGTATAAT...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGAGTAAAAGTCAACTaGCTTCATTCTATGAGAATG +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIRVKVN*LHSMRM
Trigger: CATTCTCATAGAATGAAGGCAGTTGACTTTTACTCT...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCATCTTCTAAGCAATGTTaGTGTTGCCTGCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKASSKQC*CCLQNS
Trigger: ACTGTTTTGCAGGCAACACCAACATTGCTTAGAAGA...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAACATCAATTTTGCCGTaGGATGTAAATGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKATSILP*DVNGRE
Trigger: CTCTCTACCATTTACATCCCACGGCAAAATTGATGT...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CCA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCTCAAATTTTGAATGTTaGTCTGTGAAACTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: INTLQLSTLRFQDPHFPISNFEC*SVKLSQ
Trigger: CTGACTCAGTTTCACAGACCAACATTCAAAATTTGA...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR TCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAAGTACACAGTTGTAGATaGCTTATCAAAAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKVHSCR*LIKSGY
Trigger: ATACCCACTTTTGATAAGTCATCTACAACTGTGTAC...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAAAAATTTGACTCCCTCTaGTCAGTACAACAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKKFDSL*SVQQKH
Trigger: ATGCTTTTGTTGTACTGAGCAGAGGGAGTCAAATTT...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR GCA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAAAATTTGACTCCCTCTaGTCAGTACAACAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKAKFDSL*SVQQKH
Trigger: ATGCTTTTGTTGTACTGAGCAGAGGGAGTCAAATTT...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451613.5
ENST00000503808.5
ENST00000514745.5
CDS-3UTR GCA 90 bp AAACACACTTCTTTCTCCACCACAATAAAGTTTCCACACTTAGATACACATGCTAGAGTAAAAGTCAACTaGCTTCATTCTATGAGAATG +
Preference number: 4 (lower is better)
Translates to: KHTSFSTTIKFPHLDTHARVKVN*LHSMRM
Trigger: CATTCTCATAGAATGAAGGCAGTTGACTTTTACTCT...AGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGAGAAAGAAGTGTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CCA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAATCAAATTTTGAATGTTaGTCTGTGAAACTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AHNINQHRVNYNFWTATKSNFEC*SVKLSQ
Trigger: CTGACTCAGTTTCACAGACCAACATTCAAAATTTGA...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCTCTCGCGGATTAGGTTaGATCGCATTCGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCSRGLG*IAFGPF
Trigger: GAAAGGGCCGAATGCGATCAAACCTAATCCGCGAGA...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp CAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTACAAATCCAGGGACTCTaGACCCCAAGGCCCACAATA +
Preference number: 5 (lower is better)
Translates to: QIQGLLTPRPTILISTGLQIQGL*TPRPTI
Trigger: TATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG...TAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp CACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCCCGGGACTGCATGACTaGGAAGATATTTCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: HICLCLTSTSHVTPFSESPGLHD*EDISAV
Trigger: AACTGCAGAAATATCTTCCAAGTCATGCAGTCCCGG...GGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ATACCATGTAACTGCACAAGACTCCACTTGCTGAAGCTCTTCAGCAACCTGTTGGAAGCATCTACACATTaGCCTGTGTCTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: IPCNCTRLHLLKLFSNLLEASTH*PVSDLH
Trigger: GTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTC...CAACAGGTTGCTGAAGAGCTTCAGCAAGTGGAGTCTTGTGCAGTTACATGGTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CAA 90 bp CCTCTCCAGCTTCTGAGAACTGTCAATGATGGAAACGCTTCACCACCAAGGGCTAAGCTCTTCAGCAACTaGAGAGTAGAGTTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: PLQLLRTVNDGNASPPRAKLFSN*RVELRV
Trigger: GACTCTTAACTCTACTCTCAAGTTGCTGAAGAGCTT...AGCCCTTGGTGGTGAAGCGTTTCCATCATTGACAGTTCTCAGAAGCTGGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS CCA 90 bp CTGGGGGACAATTGGCAATGTCTGGAGATTTTTGGTTGTTATGACTaGGAGGTGCTACTGAGGTCTAGCGAGTGGAGGTCAAATATATTG +
Preference number: 5 (lower is better)
Translates to: LGDNWQCLEIFGCYD*EVLLRSSEWRSNIL
Trigger: CAATATATTTGACCTCCACTCGCTAGACCTCAGTAGCACCTCCCAGTCATAACAACCAAAAATCTCCAGACATTGCCAATTGTCCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510012.1
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATCTCGCGGATTAGGTTaGATCGCATTCGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRSRGLG*IAFGPF
Trigger: GAAAGGGCCGAATGCGATCAAACCTAATCCGCGAGA...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCCTATCGCAGGTTTCCCCTTTTGATGGGAGCAACTaGACGGAAGTTGGTACAATA +
Preference number: 5 (lower is better)
Translates to: TSTSHVTPFSESLSQVSPFDGSN*TEVGTI
Trigger: TATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA...AGGGGAAACCTGCGATAGGGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp AGTTTTTCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTAGAAGCATCTACACATTaGCCTGTGTCTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: SFSISLRSRMDFKESPPLEASTH*PVSDLH
Trigger: GTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTC...TAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp CACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTTCTGAGTCCTTTGATGGGAGCAACTaGACGGAAGTTGGTACAATA +
Preference number: 5 (lower is better)
Translates to: HICLCLTSTSHVTPFSESFDGSN*TEVGTI
Trigger: TATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA...GGACTCAGAAAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp CACAGTCACAAAGTCTCCTGTAGCTCGCATTGTGCCAAGTGGTACTGTCACTTCAAGTGGAAATCCCAGTaGTACAGGCAATTCACATTT +
Preference number: 5 (lower is better)
Translates to: HSHKVSCSSHCAKWYCHFKWKSQ*YRQFTF
Trigger: AAATGTGAATTGCCTGTACAACTGGGATTTCCACTT...GAAGTGACAGTACCACTTGGCACAATGCGAGCTACAGGAGACTTTGTGACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CAA 90 bp TTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATGCTGCTGCCTCTTCAGCAACCTGTaGCACAAGTTCAATGTTAAG +
Preference number: 5 (lower is better)
Translates to: LSTLRFQDPHFPISRCCCLFSNL*HKFNVK
Trigger: CTTAACATTGAACTTGTGCAACAGGTTGCTGAAGAG...GCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR CAA 90 bp CAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTACCTCTTCAGAAACTTTaGCAACACAGGATGGATCTT +
Preference number: 5 (lower is better)
Translates to: QIQGLLTPRPTILISTGLPLQKL*QHRMDL
Trigger: AAGATCCATCCTGTGTTGCAAAAGTTTCTGAAGAGG...TAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp AGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCATCTCGCGGATTAGGTTaGATCGCATTCGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: RPTILISTGLTIIFGQQPSRGLG*IAFGPF
Trigger: GAAAGGGCCGAATGCGATCAAACCTAATCCGCGAGA...TGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp AAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCAAAATCTCTCGCGGATTAGGTTaGATCGCATTCGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: KFPHLDTHAEDSIRSPKISRGLG*IAFGPF
Trigger: GAAAGGGCCGAATGCGATCAAACCTAATCCGCGAGA...GATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGACCGGGACTGCATGACTaGGAAGATATTTCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRPGLHD*EDISAV
Trigger: AACTGCAGAAATATCTTCCAAGTCATGCAGTCCCGG...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTCCGGGACTGCATGACTaGGAAGATATTTCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCPGLHD*EDISAV
Trigger: AACTGCAGAAATATCTTCCAAGTCATGCAGTCCCGG...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp GGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTCCACTGGCTTCCTCTaGATTAATGTCGCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: GTLDPKAHNINQHRVNYNSTGFL*INVAEF
Trigger: AAACTCAGCGACATTAATCAAGAGGAAGCCAGTGGA...ATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp GCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGTCCACTGGCTTCCTCTaGATTAATGTCGCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: AGWTLRNLHHYLRRVTHQSTGFL*INVAEF
Trigger: AAACTCAGCGACATTAATCAAGAGGAAGCCAGTGGA...CTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp TCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTTCCACTGGCTTCCTCTaGATTAATGTCGCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: SLRSRMDFKESPPLFKKSSTGFL*INVAEF
Trigger: AAACTCAGCGACATTAATCAAGAGGAAGCCAGTGGA...ACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp TTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGAGAGGCACCACTTCCTCTTCAGAAACTTTaGCAACACAGGATGGATCTT +
Preference number: 5 (lower is better)
Translates to: FDGSNLTEVGTISREAPLPLQKL*QHRMDL
Trigger: AAGATCCATCCTGTGTTGCAAAAGTTTCTGAAGAGG...AAGTGGTGCCTCTCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCGAAGCATCTACACATTaGCCTGTGTCTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIEASTH*PVSDLH
Trigger: GTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTC...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ATACCATGTAACTGCACAAGACTCCACTTGCTGAAGCTCTTCAGCAACCTGTTGCAGTTCCTCCACATTTaGACTTCCAAACACACTTCT +
Preference number: 5 (lower is better)
Translates to: IPCNCTRLHLLKLFSNLLQFLHI*TSKHTS
Trigger: AGAAGTGTGTTTGGAAGTCAAAATGTGGAGGAACTG...CAACAGGTTGCTGAAGAGCTTCAGCAAGTGGAGTCTTGTGCAGTTACATGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS TCA 90 bp TGTTGGTGTTGCCGAAAATGCTGGATATTTGGTACTATACACTTATaGGGCACTCTGACAATCTTCGGTATCCCTGTAGTCCCTGATGTA +
Preference number: 5 (lower is better)
Translates to: CWCCRKCWIFGTIHL*GTLTIFGIPVVPDV
Trigger: TACATCAGGGACTACAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACCAAATATCCAGCATTTTCGGCAACACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510762.1
CDS-3UTR CAA 90 bp CAAATCCAGGGACTCTTGACCCCAAGGCCCACAATATTAATCAGCACAGGGTTATCTGCTTTTTCTTCATaGACATGCTCAGAACTTATG +
Preference number: 5 (lower is better)
Translates to: QIQGLLTPRPTILISTGLSAFSS*TCSELM
Trigger: CATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAGA...TAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTCAAGAGTCCCTGGATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGTTTGATGGGAGCAACTaGACGGAAGTTGGTACAATA +
Preference number: 5 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLFDGSN*TEVGTI
Trigger: TATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATCCACTGGCTTCCTCTaGATTAATGTCGCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRSTGFL*INVAEF
Trigger: AAACTCAGCGACATTAATCAAGAGGAAGCCAGTGGA...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp AAGCATCTACACATTTGCCTGTGTCTGACCTCCACCTCACATGTAACTCCATTTATTCAGAGACAAAATTaGACTCCCTCTGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: KHLHICLCLTSTSHVTPFIQRQN*TPSAQY
Trigger: GTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAAT...AAATGGAGTTACATGTGAGGTGGAGGTCAGACACAGGCAAATGTGTAGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp TCAATCTCACTGAGGAGCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGCCTCTTCAGAAACTTTaGCAACACAGGATGGATCTT +
Preference number: 5 (lower is better)
Translates to: SISLRSRMDFKESPPLFKPLQKL*QHRMDL
Trigger: AAGATCCATCCTGTGTTGCAAAAGTTTCTGAAGAGG...CTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGCTCCTCAGTGAGATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAATGGTTGCCGAGCTTTaGACAGCATCTTCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRMVAEL*TASSVV
Trigger: TACTACTGAAGATGCTGTCAAAAGCTCGGCAACCAT...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR CAA 90 bp ACGCTGGCTAATTTTGATGGGAGCAACTTGACGGAAGTTGGTACAATAAGCAGACAGTTCCTCCACATTTaGACTTCCAAACACACTTCT +
Preference number: 5 (lower is better)
Translates to: TLANFDGSNLTEVGTISRQFLHI*TSKHTS
Trigger: AGAAGTGTGTTTGGAAGTCAAAATGTGGAGGAACTG...TCTGCTTATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAAATTAGCCAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp GGAACCCTCAAAAGATCTTCTGGGAGATTCAGAGTAGACTTCCACAAATACTGTCTCTTCAGCAACCTGTaGCACAAGTTCAATGTTAAG +
Preference number: 5 (lower is better)
Translates to: GTLKRSSGRFRVDFHKYCLFSNL*HKFNVK
Trigger: CTTAACATTGAACTTGTGCAACAGGTTGCTGAAGAG...ACAGTATTTGTGGAAGTCTACTCTGAATCTCCCAGAAGATCTTTTGAGGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CAA 90 bp GCCGGATGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGTCAGAAACATCAATTTaGCCGTGGGATGTAAATGGT +
Preference number: 5 (lower is better)
Translates to: AGWTLRNLHHYLRRVTHQSETSI*PWDVNG
Trigger: ACCATTTACATCCCACGGCAAAATTGATGTTTCTGA...CTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCATCCGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGACCTCTTCAGAAACTTTaGCAACACAGGATGGATCTT +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRPLQKL*QHRMDL
Trigger: AAGATCCATCCTGTGTTGCAAAAGTTTCTGAAGAGG...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp CCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACGAAGCATCTACACATTaGCCTGTGTCTGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PTILISTGLTIIFGQQPNEASTH*PVSDLH
Trigger: GTGGAGGTCAGACACAGGCAAATGTGTAGATGCTTC...GTTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp GACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAAAGAGGTTCAGTAACTaGCCAAAGGTCACAGAGTTC +
Preference number: 5 (lower is better)
Translates to: DPKAHNINQHRVNYNFWTKRFSN*PKVTEF
Trigger: GAACTCTGTGACCTTTGGCAAGTTACTGAACCTCTT...TGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS TCA 90 bp ACTCGAAGAGAAGTAGTGGCTGACAAAACAGTTGACTTGATAAGCTaGGATCCAAATCTTCTAAGCAATGTTGGTGTTGCCGAAAATGCT +
Preference number: 5 (lower is better)
Translates to: TRREVVADKTVDLIS*DPNLLSNVGVAENA
Trigger: AGCATTTTCGGCAACACCAACATTGCTTAGAAGATTTGGATCTCAGCTTATCAAGTCAACTGTTTTGTCAGCCACTACTTCTCTTCGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510762.1
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAACTGGAAGCTGGTTGTaGCATTCATCAAAACATACA +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRTGSWL*HSSKHT
Trigger: TGTATGTTTTGATGAATGCAACAACCAGCTTCCAGT...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp CCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAGGGACTACAGGCAATTCACATTaGAGAGTAGAGTTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: PKVTEFIIAIQVGSNPGTTGNSH*RVELRV
Trigger: GACTCTTAACTCTACTCTCAAATGTGAATTGCCTGT...AGTCCCTGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp TGGACTTTAAGGAATCTCCACCACTATTTAAGAAGAGTGACTCATCAGGAACCCACAGGCAATTCACATTaGAGAGTAGAGTTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: WTLRNLHHYLRRVTHQEPTGNSH*RVELRV
Trigger: GACTCTTAACTCTACTCTCAAATGTGAATTGCCTGT...GGGTTCCTGATGAGTCACTCTTCTTAAATAGTGGTGGAGATTCCTTAAAGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGAAAGTGGAAATCCCAGTaGTACAGGCAATTCACATTT +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRKWKSQ*YRQFTF
Trigger: AAATGTGAATTGCCTGTACAACTGGGATTTCCACTT...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR CAA 90 bp GACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACACTCTTCAGCAACCTGTaGCACAAGTTCAATGTTAAG +
Preference number: 5 (lower is better)
Translates to: DPKAHNINQHRVNYNFWTLFSNL*HKFNVK
Trigger: CTTAACATTGAACTTGTGCAACAGGTTGCTGAAGAG...TGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp GCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACCGGGACTGCATGACTaGGAAGATATTTCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: AHNINQHRVNYNFWTATKPGLHD*EDISAV
Trigger: AACTGCAGAAATATCTTCCAAGTCATGCAGTCCCGG...TTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp ACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGTAGATCAGAAACATCAATTTaGCCGTGGGATGTAAATGGT +
Preference number: 5 (lower is better)
Translates to: TLQLSTLRFQDPHFPISRSETSI*PWDVNG
Trigger: ACCATTTACATCCCACGGCAAAATTGATGTTTCTGA...TCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCATTCAGAGACAAAATTaGACTCCCTCTGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIIQRQN*TPSAQY
Trigger: GTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAAT...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp TTGTGGGGAAGAGAAGAGTGGTTTTCCACAGGAATGTTTCCAAATAACGTTCCCATAAACACTTTGCAATaGTCCACTCTGAGATTCCAA +
Preference number: 5 (lower is better)
Translates to: LWGREEWFSTGMFPNNVPINTLQ*STLRFQ
Trigger: TTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT...GGGAACGTTATTTGGAAACATTCCTGTGGAAAACCACTCTTCTCTTCCCCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514745.5
CDS-3UTR CAA 90 bp CTGCCAGCAACATTTCATTGCTGCCATTGTAGTTATGGAAAGCAAACGGTGTTGAAGTTCATAAACACTTaGCAATTGTCCACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: LPATFHCCHCSYGKQTVLKFINT*QLSTLR
Trigger: TCTCAGAGTGGACAATTGCAAAGTGTTTATGAACTT...CAACACCGTTTGCTTTCCATAACTACAATGGCAGCAATGAAATGTTGCTGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS TCA 90 bp TGCCAAACCCACCACAATAAAGTTTCCACACTTAGATACACATGCTaGGGATTCAATTCGATCTCCCAAAATCTGTTCCCATTTTACCTT +
Preference number: 5 (lower is better)
Translates to: CQTHHNKVSTLRYTC*GFNSISQNLFPFYL
Trigger: AAGGTAAAATGGGAACAGATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGGTTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR CAA 90 bp AGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCATTTGATGGGAGCAACTaGACGGAAGTTGGTACAATA +
Preference number: 5 (lower is better)
Translates to: RPTILISTGLTIIFGQQPFDGSN*TEVGTI
Trigger: TATTGTACCAACTTCCGTCAAGTTGCTCCCATCAAA...TGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCACAGGCAATTCACATTaGAGAGTAGAGTTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: INTLQLSTLRFQDPHFPITGNSH*RVELRV
Trigger: GACTCTTAACTCTACTCTCAAATGTGAATTGCCTGT...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451613.5
CDS-3UTR CAA 90 bp CTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCAATCATGGGAACCAAATCAGAAACATCAATTTaGCCGTGGGATGTAAATGGT +
Preference number: 5 (lower is better)
Translates to: LQVTFHVTTVDKAIMGTKSETSI*PWDVNG
Trigger: ACCATTTACATCCCACGGCAAAATTGATGTTTCTGA...TTTGGTTCCCATGATTGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp AACTCAGAAACATCAATTTTGCCGTGGGATGTAAATGGTAGAGAGTCGATCAATATTCAGAGACAAAATTaGACTCCCTCTGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: NSETSILPWDVNGRESINIQRQN*TPSAQY
Trigger: GTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAAT...ATTGATCGACTCTCTACCATTTACATCCCACGGCAAAATTGATGTTTCTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503808.5
ENST00000514745.5
CDS-3UTR CAA 90 bp AAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAGATAAACACTTTGCAATaGTCCACTCTGAGATTCCAA +
Preference number: 5 (lower is better)
Translates to: KHFAIVHSEIPRSTLSHQINTLQ*STLRFQ
Trigger: TTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT...CTGATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCAAAGTGGAAATCCCAGTaGTACAGGCAATTCACATTT +
Preference number: 5 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPKWKSQ*YRQFTF
Trigger: AAATGTGAATTGCCTGTACAACTGGGATTTCCACTT...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp AACTTGCCAAAGGTCACAGAGTTCATAATAGCTATACAGGTAGGTTCAAATCCATCAGAAACATCAATTTaGCCGTGGGATGTAAATGGT +
Preference number: 5 (lower is better)
Translates to: NLPKVTEFIIAIQVGSNPSETSI*PWDVNG
Trigger: ACCATTTACATCCCACGGCAAAATTGATGTTTCTGA...TGGATTTGAACCTACCTGTATAGCTATTATGAACTCTGTGACCTTTGGCAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp CCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACAGCAACCAAACATTCAGAGACAAAATTaGACTCCCTCTGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: PTILISTGLTIIFGQQPNIQRQN*TPSAQY
Trigger: GTACTGAGCAGAGGGAGTCAAATTTTGTCTCTGAAT...GTTTGGTTGCTGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp ATAAACACTTTGCAATTGTCCACTCTGAGATTCCAAGATCCACACTTTCCCATCAAGTTCATAAACACTTaGCAATTGTCCACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: INTLQLSTLRFQDPHFPIKFINT*QLSTLR
Trigger: TCTCAGAGTGGACAATTGCAAAGTGTTTATGAACTT...GATGGGAAAGTGTGGATCTTGGAATCTCAGAGTGGACAATTGCAAAGTGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000514745.5
CDS-3UTR CAA 90 bp GACCCCAAGGCCCACAATATTAATCAGCACAGGGTTAACTATAATTTTTGGACATTGTGTTGTTCTAGGTaGTTGAGTTTTGGGGTATTT +
Preference number: 5 (lower is better)
Translates to: DPKAHNINQHRVNYNFWTLCCSR*LSFGVF
Trigger: AAATACCCCAAAACTCAACAACCTAGAACAACACAA...TGTCCAAAAATTATAGTTAACCCTGTGCTGATTAATATTGTGGGCCTTGGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS TCA 90 bp AAACTTACCCACCACAATAAAGTTTCCACACTTAGATACACATGCTaGGGATTCAATTCGATCTCCCAAAATCTGTTCCCATTTTACCTT +
Preference number: 5 (lower is better)
Translates to: KLTHHNKVSTLRYTC*GFNSISQNLFPFYL
Trigger: AAGGTAAAATGGGAACAGATTTTGGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGTGGTGGGTAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502617.1
CDS-3UTR CAA 90 bp ACAATAAAGTTTCCACACTTAGATACACATGCTGAGGATTCAATTCGATCTCCCTCTGCTTTTTCTTCATaGACATGCTCAGAACTTATG +
Preference number: 5 (lower is better)
Translates to: TIKFPHLDTHAEDSIRSPSAFSS*TCSELM
Trigger: CATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAGA...GGGAGATCGAATTGAATCCTCAGCATGTGTATCTAAGTGTGGAAACTTTATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503808.5
CDS-3UTR CAA 90 bp AGTTTCAAATTTCCACTGCAGGTGACCTTTCATGTTACAACAGTAGATAAAGCATCTGCTTTTTCTTCATaGACATGCTCAGAACTTATG +
Preference number: 5 (lower is better)
Translates to: SFKFPLQVTFHVTTVDKASAFSS*TCSELM
Trigger: CATAAGTTCTGAGCATGTCAATGAAGAAAAAGCAGA...TGCTTTATCTACTGTTGTAACATGAAAGGTCACCTGCAGTGGAAATTTGAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451613.5
ENST00000503808.5
CDS CAA 72 bp GTAGCACAGAACCTTAGCAAGTCTCGCGGATTAGGTTaGATCGCATTCGGCCCTTTCCCGGATAGCTCGTCG +
Preference number: 6 (lower is better)
Translates to: VAQNLSKSRGLG*IAFGPFPDSSS
Trigger: CGACGAGCTATCCGGGAAAGGGCCGAATGCGATCAAACCTAATCCGCGAGACTTGCTAAGGTTCTGTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205214.11
ENST00000451613.5
ENST00000502617.1
ENST00000503808.5
ENST00000510012.1
ENST00000514745.5
ENST00000602986.5
CDS CAA 72 bp GACTTGGAGAATTTTAGCAAGTCTCGCGGATTAGGTTaGATCGCATTCGGCCCTTTCCCGGATAGCTCGTCG +
Preference number: 6 (lower is better)
Translates to: DLENFSKSRGLG*IAFGPFPDSSS
Trigger: CGACGAGCTATCCGGGAAAGGGCCGAATGCGATCAAACCTAATCCGCGAGACTTGCTAAAATTCTCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513376.5
CDS CAA 90 bp CATCAATTTGTAGCACAGAACCTTAGCAAGTCTCGCGGATTAGGTTaGATCGCATTCGGCCCTTTCCCGGATAGCTCGTCGCGGATACTT +
Preference number: 6 (lower is better)
Translates to: HQFVAQNLSKSRGLG*IAFGPFPDSSSRIL
Trigger: AAGTATCCGCGACGAGCTATCCGGGAAAGGGCCGAATGCGATCAAACCTAATCCGCGAGACTTGCTAAGGTTCTGTGCTACAAATTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205214.11
ENST00000451613.5
ENST00000502617.1
ENST00000503808.5
ENST00000510012.1
ENST00000514745.5
ENST00000602986.5
CDS TCA 72 bp TGCCGAAAATGCTGGATATTTGGTACTATACACTTATaGGGCACTCTGACAATCTTCGGTATCCCTGTAGTC +
Preference number: 6 (lower is better)
Translates to: CRKCWIFGTIHL*GTLTIFGIPVV
Trigger: GACTACAGGGATACCGAAGATTGTCAGAGTGCCTCATAAGTGTATAGTACCAAATATCCAGCATTTTCGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510762.1
CDS CCA 72 bp AGCAGCATTAACCACAGTCTTGTAGGTGTAGTAAACTaGAAGCTGGTTGTTGCATTCATCAAAACATACAGC +
Preference number: 6 (lower is better)
Translates to: SSINHSLVGVVN*KLVVAFIKTYS
Trigger: GCTGTATGTTTTGATGAATGCAACAACCAGCTTCCAGTTTACTACACCTACAAGACTGTGGTTAATGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000205214.11
ENST00000451613.5
ENST00000502617.1
ENST00000503808.5
ENST00000510012.1
ENST00000514745.5
ENST00000514796.1
ENST00000602986.5
CDS GCA 72 bp CAGTCTTGTAGGTGTAGTAAACTGGAAGCTGGTTGTTaGATTCATCAAAACATACAGCTACTCTGTCCATAT +
Preference number: 6 (lower is better)
Translates to: QSCRCSKLEAGC*IHQNIQLLCPY
Trigger: ATATGGACAGAGTAGCTGTATGTTTTGATGAATGCAACAACCAGCTTCCAGTTTACTACACCTACAAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000205214.11
ENST00000451613.5
ENST00000502617.1
ENST00000503808.5
ENST00000510012.1
ENST00000514745.5
ENST00000514796.1
ENST00000602986.5