RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AAR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000131043

Ensembl transcript IDs: ENST00000320849.9, ENST00000373932.3, ENST00000397286.7, ENST00000679519.1, ENST00000679667.1, ENST00000680185.1, ENST00000680247.1, ENST00000680412.1, ENST00000680639.1, ENST00000680811.1, ENST00000680933.1, ENST00000681771.1

Found 1284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGTCAGGGTGGCAGGGCCTGTGTACTTGTCTAGAGAGGAACCCTaGCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAC +
Preference number: 1 (lower is better)
Translates to: DVRVAGPVYLSREEP*HTARRTPEEPGAHY
Trigger: GTAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAAGTACACAGGCCCTGCCACCCTGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CCA 90 bp GGGCACAGTCCTCAGGTTCCGCAGCAAAGTCCCACCGGAACTTCTTaGTCAGGTGAGCTTGGAACTTTTCAGCTTTCTTTCTCAGGGTGG +
Preference number: 1 (lower is better)
Translates to: GHSPQVPQQSPTGTS*SGELGTFQLSFSGW
Trigger: CCACCCTGAGAAAGAAAGCTGAAAAGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGGACTTTGCTGCGGAACCTGAGGACTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR TCA 90 bp TCCTCAGGTTCCGCAGCAAAGTCCCACCGGAACTTCTTGGTCAGGTaGGCTTGGAACTTTTCAGCTTTCTTTCTCAGGGTGGCATCCACG +
Preference number: 1 (lower is better)
Translates to: SSGSAAKSHRNFLVR*AWNFSAFFLRVAST
Trigger: CGTGGATGCCACCCTGAGAAAGAAAGCTGAAAAGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGGACTTTGCTGCGGAACCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR GCA 90 bp AGCCAGGTTAGCACCAAGGCCTGGCTGATGGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGCCTCTTTGGCAATGAAGAAATATAT +
Preference number: 1 (lower is better)
Translates to: SQVSTKAWLMGNPQM*LQDGYSLFGNEEIY
Trigger: ATATATTTCTTCATTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAACCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CCA 90 bp ACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTaGGCAGAAACCTTTCTGGTTGTTGTTGACTCTCCAGGTCATCAG +
Preference number: 1 (lower is better)
Translates to: TWKAQNFVKALRSLL*AETFLVVVDSPGHQ
Trigger: CTGATGACCTGGAGAGTCAACAACAACCAGAAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR GCA 90 bp CTTGGACTTTTGGTTCAATTCCTTCTCATTCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGC +
Preference number: 1 (lower is better)
Translates to: LGLLVQFLLIQRKYG*RVGRCLLGACVCKS
Trigger: GCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAAAAGTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CCA 90 bp CAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTTTCTTGGACTTTTGGTTCAATTCCT +
Preference number: 1 (lower is better)
Translates to: QTPWAIQGFLFPKLL*NKQSVLSWTFGSIP
Trigger: AGGAATTGAACCAAAAGTCCAAGAAAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATCACGGTGGCTCTGGTaGGGAAGGGGAGGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGESRWLW*GRGGSH
Trigger: GTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGA...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 2 (lower is better)
Translates to: PRNQELITPVTDSSTAGLHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGGAGGGTCCCACTTCTaGGTGAGGCCTCGGAATGGA +
Preference number: 2 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEGGSHF*VRPRNG
Trigger: TCCATTCCGAGGCCTCACCCAGAAGTGGGACCCTCC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 2 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTATCACGGTGGCTCTGGTaGGGAAGGGGAGGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLSRWLW*GRGGSH
Trigger: GTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGA...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp GCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGCTCCACCACCACCGGTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: ALPELAHLDALRELHHHRFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...CCGGTGGTGGTGGAGCTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGGAGGGTCCCACTTCTaGGTGAGGCCTCGGAATGGA +
Preference number: 2 (lower is better)
Translates to: PRNQELITPVTDSSTAGLGGSHF*VRPRNG
Trigger: TCCATTCCGAGGCCTCACCCAGAAGTGGGACCCTCC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGAGATGACCCACTaGGCCTCTGGACAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEWEMTH*ASGQEN
Trigger: ATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCA...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGTGGGAGATGACCCACTaGGCCTCTGGACAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGWEMTH*ASGQEN
Trigger: ATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCA...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 2 (lower is better)
Translates to: PRNQELITPVTDSSTAGLVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCTCACGGTGGCTCTGGTaGGGAAGGGGAGGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGSRWLW*GRGGSH
Trigger: GTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGA...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACATTACTCCGGTGACTaGCAGCTCCACAGCGGGACT +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGHYSGD*QLHSGT
Trigger: AGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: YLARGRRQFGLISPSPFIWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 2 (lower is better)
Translates to: PRNQELITPVTDSSTAGLGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PRNQELITPVTDSSTAGLAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAGGTGAGGCCTCGGAATaGAACAGGTGGGAGGTGACA +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLGEASE*NRWEVT
Trigger: TGTCACCTCCCACCTGTTCCATTCCGAGGCCTCACC...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGGTGAGGCCTCGGAATaGAACAGGTGGGAGGTGACA +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGGEASE*NRWEVT
Trigger: TGTCACCTCCCACCTGTTCCATTCCGAGGCCTCACC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACAGCTCATTACTCCGGTaGCTGACAGCTCCACAGCGG +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHSSLLR*LTAPQR
Trigger: CCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCT...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: PRNQELITPVTDSSTAGLFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGNVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCTGGGAGATGACCCACTaGGCCTCTGGACAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPWEMTH*ASGQEN
Trigger: ATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCA...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTATCGGAATGGAACAGGTaGGAGGTGACAGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLSEWNR*EVTAPA
Trigger: TGCTGGTGCTGTCACCTCCCACCTGTTCCATTCCGA...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCCAGCTGCCTCCCTTaGAACTCTCTTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTSSCLP*NSLPNQ
Trigger: TTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGA...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGCTTTCTGGTTGTTGTTaGCTCTCCAGGTCATCAGAA +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGLSGCC*LSRSSE
Trigger: TTCTGATGACCTGGAGAGTCAACAACAACCAGAAAG...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACATAGTACAACAGTTTaGTGTCAGGGTGGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGHSTTV*CQGGRA
Trigger: GGCCCTGCCACCCTGACATCAAACTGTTGTACTATG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGERMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGRMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGTTAAGAAGCCTGCTCTaGGCAGAAACCTTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: GPHPPWEMTHWASGQENGLRSLL*AETFLV
Trigger: AACCAGAAAGGTTTCTGCCCAGAGCAGGCTTCTTAA...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGATGTGAGCCCCAGTCTTaGAAAAGGATGGCACAGGGA +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGCEPQS*KRMAQG
Trigger: TCCCTGTGCCATCCTTTTCCAAGACTGGGGCTCACA...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTATCCAGCTGCCTCCCTTaGAACTCTCTTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLSSCLP*NSLPNQ
Trigger: TTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGA...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCTCCAGCTGCCTCCCTTaGAACTCTCTTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPSSCLP*NSLPNQ
Trigger: TTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGA...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTTCACGGTGGCTCTGGTaGGGAAGGGGAGGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFSRWLW*GRGGSH
Trigger: GTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGA...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGATGGGAAGATTTAGGCTaGCCAGGTCTTCTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGWEDLG*PGLLQH
Trigger: GTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCA...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCATAGTACAACAGTTTaGTGTCAGGGTGGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHHSTTV*CQGGRA
Trigger: GGCCCTGCCACCCTGACATCAAACTGTTGTACTATG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGATTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: PRNQELITPVTDSSTAGLRMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCGGTGAGGCCTCGGAATaGAACAGGTGGGAGGTGACA +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGGEASE*NRWEVT
Trigger: TGTCACCTCCCACCTGTTCCATTCCGAGGCCTCACC...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 2 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 2 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTCCAGCTGCCTCCCTTaGAACTCTCTTCCCAATCAA +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHSSCLP*NSLPNQ
Trigger: TTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: YLARGRRQFGLISPSPFIDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACATCCACGGCAATGCTaGAGGCAGAGGAAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGHPRQC*RQRKRK
Trigger: TTTTCTTTTCCTCTGCCTGCAGCATTGCCGTGGATG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: YLARGRRQFGLISPSPFIHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLNVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPNVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGTGAGGCCTCGGAATaGAACAGGTGGGAGGTGACA +
Preference number: 2 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEGEASE*NRWEVT
Trigger: TGTCACCTCCCACCTGTTCCATTCCGAGGCCTCACC...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTTAAGAAGCCTGCTCTaGGCAGAAACCTTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTLRSLL*AETFLV
Trigger: AACCAGAAAGGTTTCTGCCCAGAGCAGGCTTCTTAA...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGCCCACCGGAACTTCTTaGTCAGGTGAGCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLPTGTS*SGELGT
Trigger: AGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGG...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR CAA 90 bp AGGTTCCGCAGCAAAGTCCCACCGGAACTTCTTGGTCAGGTGAGCTaGGAACTTTTCAGCTTTCTTTCTCAGGGTGGCATCCACGGCAAT +
Preference number: 2 (lower is better)
Translates to: RFRSKVPPELLGQVS*ELFSFLSQGGIHGN
Trigger: ATTGCCGTGGATGCCACCCTGAGAAAGAAAGCTGAAAAGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGGACTTTGCTGCGGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR-3UTR TCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTACTTTCTGGTTGTTGTTaGCTCTCCAGGTCATCAGAA +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLLSGCC*LSRSSE
Trigger: TTCTGATGACCTGGAGAGTCAACAACAACCAGAAAG...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHNVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTACATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLHSEEI*LPCRQM
Trigger: CATCTGCCTACACGGCAACCATATTTCCTCTGAATG...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGHSEEI*LPCRQM
Trigger: CATCTGCCTACACGGCAACCATATTTCCTCTGAATG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTCATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSHSEEI*LPCRQM
Trigger: CATCTGCCTACACGGCAACCATATTTCCTCTGAATG...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEFPKLL*NKQSVL
Trigger: AAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAA...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLRMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGGGCAGAAACCTTTCTaGTTGTTGTTGACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHGQKPF*LLLTLQ
Trigger: CTGGAGAGTCAACAACAACCAGAAAGGTTTCTGCCC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTATTAAGAAGCCTGCTCTaGGCAGAAACCTTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLLRSLL*AETFLV
Trigger: AACCAGAAAGGTTTCTGCCCAGAGCAGGCTTCTTAA...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGATTAAGAAGCCTGCTCTaGGCAGAAACCTTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: LSREEPCHTARRTPEEPGLRSLL*AETFLV
Trigger: AACCAGAAAGGTTTCTGCCCAGAGCAGGCTTCTTAA...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTAGCTCATTACTCCGGTaGCTGACAGCTCCACAGCGG +
Preference number: 2 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPASSLLR*LTAPQR
Trigger: CCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCT...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CTTTCTTGGACTTTTGGTTCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: LSWTFGSIPSHSEEIWLPWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...CGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAAAAGTCCAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPATWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp GGACTTTTGGTTCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: GLLVQFLLIQRKYGCRVGRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...GCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAAAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 2 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 2 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTCATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCHSEEI*LPCRQM
Trigger: CATCTGCCTACACGGCAACCATATTTCCTCTGAATG...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEETSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 2 (lower is better)
Translates to: QFLLIQRKYGCRVGRCLLAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...TAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp ACATCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: TSPRKQVEAKVSTSRDSHTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...ATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: KVTNQLLRPPGQSRVSCFFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...GAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: KVTNQLLRPPGQSRVSCFWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...GAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGACTTTTGGTTCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: GLLVQFLLIQRKYGCRVGERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...GCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: YLARGRRQFGLISPSPFINVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMNVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTTGGGAGATGACCCACTaGGCCTCTGGACAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFWEMTH*ASGQEN
Trigger: ATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCA...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTTCGGAATGGAACAGGTaGGAGGTGACAGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFSEWNR*EVTAPA
Trigger: TGCTGGTGCTGTCACCTCCCACCTGTTCCATTCCGA...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTTTCTGGCTCCATCTTTaGAGGACCTGGAGAGATTGC +
Preference number: 2 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFFWLHL*RTWRDC
Trigger: GCAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAA...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp ACATCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: TSPRKQVEAKVSTSRDSHHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...ATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 2 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp ACATCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 2 (lower is better)
Translates to: TSPRKQVEAKVSTSRDSHVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...ATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTCATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: YLARGRRQFGLISPSPFIHSEEI*LPCRQM
Trigger: CATCTGCCTACACGGCAACCATATTTCCTCTGAATG...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPATSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: YLARGRRQFGLISPSPFIRMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCATGGGAGATGACCCACTaGGCCTCTGGACAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSWEMTH*ASGQEN
Trigger: ATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCA...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCATCGGAATGGAACAGGTaGGAGGTGACAGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSSEWNR*EVTAPA
Trigger: TGCTGGTGCTGTCACCTCCCACCTGTTCCATTCCGA...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTGGAGGGTCCCACTTCTaGGTGAGGCCTCGGAATGGA +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGGGSHF*VRPRNG
Trigger: TCCATTCCGAGGCCTCACCCAGAAGTGGGACCCTCC...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CAA 90 bp AGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTaGTTTCCTAAGCTCCTATGGAACAAGCAATCAGTTCTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: SHQPTSQTPWAIQGF*FPKLLWNKQSVLSW
Trigger: CCAAGAAAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTCATTACTCCGGTGACTaGCAGCTCCACAGCGGGACT +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGHYSGD*QLHSGT
Trigger: AGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATG...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAAGCTCATTACTCCGGTaGCTGACAGCTCCACAGCGG +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKSSLLR*LTAPQR
Trigger: CCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCT...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SIPSHSEEIWLPCRQMSPAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...AGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTTTCTTGGACTTTTGGTTCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: LSWTFGSIPSHSEEIWLPERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...CGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAAAAGTCCAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCCAATCAGTTCTTTCTTaGACTTTTGGTTCAATTCCT +
Preference number: 2 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPQSVLS*TFGSIP
Trigger: AGGAATTGAACCAAAAGTCCAAGAAAGAACTGATTG...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCTTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLFPKLL*NKQSVL
Trigger: AAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAA...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: SIPSHSEEIWLPCRQMSPTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...AGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKRMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp ACATCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: TSPRKQVEAKVSTSRDSHMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...ATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 2 (lower is better)
Translates to: SIPSHSEEIWLPCRQMSPMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...AGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: SIPSHSEEIWLPCRQMSPWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...AGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTTTCTTGGACTTTTGGTTCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: LSWTFGSIPSHSEEIWLPHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...CGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAAAAGTCCAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: KAQNFVKALRSLLWAETFNVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp ATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCAATCAGTTCTTTCTGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 2 (lower is better)
Translates to: IQGFLFPKLLWNKQSVLSVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...AGAAAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTCAATCAGTTCTTTCTTaGACTTTTGGTTCAATTCCT +
Preference number: 2 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCQSVLS*TFGSIP
Trigger: AGGAATTGAACCAAAAGTCCAAGAAAGAACTGATTG...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTTCGGAATGGAACAGGTaGGAGGTGACAGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGSEWNR*EVTAPA
Trigger: TGCTGGTGCTGTCACCTCCCACCTGTTCCATTCCGA...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTGGGCAGAAACCTTTCTaGTTGTTGTTGACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPAGQKPF*LLLTLQ
Trigger: CTGGAGAGTCAACAACAACCAGAAAGGTTTCTGCCC...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTTTCTGGTTGTTGTTaGCTCTCCAGGTCATCAGAA +
Preference number: 2 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPALSGCC*LSRSSE
Trigger: TTCTGATGACCTGGAGAGTCAACAACAACCAGAAAG...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp ATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCAATCAGTTCTTTCTGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 2 (lower is better)
Translates to: IQGFLFPKLLWNKQSVLSGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...AGAAAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCACAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTTCTAGAGAGGAACCCTaGCACACAGCACGAAGGACT +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGSREEP*HTARRT
Trigger: AGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGA...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPAHSEEI*LPCRQM
Trigger: CATCTGCCTACACGGCAACCATATTTCCTCTGAATG...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCTTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGFPKLL*NKQSVL
Trigger: AAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAA...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCTTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSFPKLL*NKQSVL
Trigger: AAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAA...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPARMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAATGGGAAGATTTAGGCTaGCCAGGTCTTCTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKWEDLG*PGLLQH
Trigger: GTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCA...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCACATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATG +
Preference number: 2 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSHSEEI*LPCRQM
Trigger: CATCTGCCTACACGGCAACCATATTTCCTCTGAATG...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTCAATCAGTTCTTTCTTaGACTTTTGGTTCAATTCCT +
Preference number: 2 (lower is better)
Translates to: YLARGRRQFGLISPSPFIQSVLS*TFGSIP
Trigger: AGGAATTGAACCAAAAGTCCAAGAAAGAACTGATTG...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGTTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: PPARLNPAASLETLFPIKFPKLL*NKQSVL
Trigger: AAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAA...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTTTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACFPKLL*NKQSVL
Trigger: AAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAA...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp ACATCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCTCATTCAAAAACATaGTGTGAGCCCCAGTCTTGG +
Preference number: 2 (lower is better)
Translates to: TSPRKQVEAKVSTSRDSHSHSKT*CEPQSW
Trigger: CCAAGACTGGGGCTCACACCATGTTTTTGAATGAGA...ATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR GCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp ATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCAATCAGTTCTTTCTAATGTGCCTTCAGGATaGGTACAGCCTCTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: IQGFLFPKLLWNKQSVLSNVPSG*VQPLWQ
Trigger: TTGCCAAAGAGGCTGTACCCATCCTGAAGGCACATT...AGAAAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTCAATCAGTTCTTTCTTaGACTTTTGGTTCAATTCCT +
Preference number: 2 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACQSVLS*TFGSIP
Trigger: AGGAATTGAACCAAAAGTCCAAGAAAGAACTGATTG...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTGGGCAGAAACCTTTCTaGTTGTTGTTGACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGGQKPF*LLLTLQ
Trigger: CTGGAGAGTCAACAACAACCAGAAAGGTTTCTGCCC...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAGGGCAGAAACCTTTCTaGTTGTTGTTGACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKGQKPF*LLLTLQ
Trigger: CTGGAGAGTCAACAACAACCAGAAAGGTTTCTGCCC...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR TCA 90 bp CCCCAAAACAGGAGAGTGGTTATACCAAGGTATAAACACAGAATGAAATATGCTGTAATCCCAACATTTTaGGAGGCCAAAGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: PQNRRVVIPRYKHRMKYAVIPTF*EAKVGG
Trigger: TCCTCCCACTTTGGCCTCTCAAAATGTTGGGATTAC...AGCATATTTCATTCTGTGTTTATACCTTGGTATAACCACTCTCCTGTTTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397286.7
3UTR-3UTR CCA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 2 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKRMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp ACATCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTTTCCTAAGCTCCTATaGAACAAGCAATCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: TSPRKQVEAKVSTSRDSHFPKLL*NKQSVL
Trigger: AAGAACTGATTGCTTGTTCCATAGGAGCTTAGGAAA...ATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CCA 90 bp TCAATTCCTTCTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTCAATCAGTTCTTTCTTaGACTTTTGGTTCAATTCCT +
Preference number: 2 (lower is better)
Translates to: SIPSHSEEIWLPCRQMSPQSVLS*TFGSIP
Trigger: AGGAATTGAACCAAAAGTCCAAGAAAGAACTGATTG...AGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGGGGTCCACACCCACCTaGGGAGATGACCCACTGGGC +
Preference number: 3 (lower is better)
Translates to: GPHPPWEMTHWASGQENGGSTPT*GDDPLG
Trigger: GCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCC...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCGGGTCCACACCCACCTaGGGAGATGACCCACTGGGC +
Preference number: 3 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPGSTPT*GDDPLG
Trigger: GCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCC...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAGGGTCCACACCCACCTaGGGAGATGACCCACTGGGC +
Preference number: 3 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLGSTPT*GDDPLG
Trigger: GCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCC...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CCA 72 bp GGCCAGGGTCCACACCCACCTTGGGAGATGACCCACTaGGCCTCTGGACAGGAGAATGGGATTTCGATGGAG +
Preference number: 3 (lower is better)
Translates to: GQGPHPPWEMTH*ASGQENGISME
Trigger: CTCCATCGAAATCCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR GCA 72 bp GTGGCAGGGCCTGTGTACTTGTCTAGAGAGGAACCCTaGCACACAGCACGAAGGACTCCCGAGGAACCAGGA +
Preference number: 3 (lower is better)
Translates to: VAGPVYLSREEP*HTARRTPEEPG
Trigger: TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAAGTACACAGGCCCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR GCA 72 bp ATCAAGGGCTCCCAAGGAGCTGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGG +
Preference number: 3 (lower is better)
Translates to: IKGSQGAAGQVL*SYLARGRRQFG
Trigger: CCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCCTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGGCAATCCAGGGTTTCTaGTTTCCTAAGCTCCTATGG +
Preference number: 3 (lower is better)
Translates to: GPHPPWEMTHWASGQENGAIQGF*FPKLLW
Trigger: CCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGC...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAACCTTTCTGGTTGTTGTaGACTCTCCAGGTCATCAGA +
Preference number: 3 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEPFWLL*TLQVIR
Trigger: TCTGATGACCTGGAGAGTCAACAACAACCAGAAAGG...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGTCAGAGGAAATATGGTaGCCGTGTAGGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: PRNQELITPVTDSSTAGLSEEIW*PCRQMS
Trigger: AGACATCTGCCTACACGGCAACCATATTTCCTCTGA...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGCAATCCAGGGTTTCTaGTTTCCTAAGCTCCTATGG +
Preference number: 3 (lower is better)
Translates to: PRNQELITPVTDSSTAGLAIQGF*FPKLLW
Trigger: CCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR TCA 72 bp AAGGACTCCCGAGGAACCAGGAGCTCATTACTCCGGTaGCTGACAGCTCCACAGCGGGACTGGGAAGATTTA +
Preference number: 3 (lower is better)
Translates to: KDSRGTRSSLLR*LTAPQRDWEDL
Trigger: TAAATCTTCCCAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGGGAGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATTCTGGCTCCATCTTaGCAGGACCTGGAGAGATTG +
Preference number: 3 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPILAPS*QDLERL
Trigger: CAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAAT...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCAGAGGAAATATGGTaGCCGTGTAGGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTSEEIW*PCRQMS
Trigger: AGACATCTGCCTACACGGCAACCATATTTCCTCTGA...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTGGGTCCACACCCACCTaGGGAGATGACCCACTGGGC +
Preference number: 3 (lower is better)
Translates to: KAQNFVKALRSLLWAETFGSTPT*GDDPLG
Trigger: GCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCC...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTCCTTTCTGGTTGTTGTaGACTCTCCAGGTCATCAGA +
Preference number: 3 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTPFWLL*TLQVIR
Trigger: TCTGATGACCTGGAGAGTCAACAACAACCAGAAAGG...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CCA 72 bp GCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAAATGTGCCTTCAGGAT +
Preference number: 3 (lower is better)
Translates to: ACVKFSQVSTKA*LMGNPQMCLQD
Trigger: ATCCTGAAGGCACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTTCAGAGGAAATATGGTaGCCGTGTAGGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSSEEIW*PCRQMS
Trigger: AGACATCTGCCTACACGGCAACCATATTTCCTCTGA...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCTCAGAGGAAATATGGTaGCCGTGTAGGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPSEEIW*PCRQMS
Trigger: AGACATCTGCCTACACGGCAACCATATTTCCTCTGA...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACCTTTCTGGTTGTTGTaGACTCTCCAGGTCATCAGA +
Preference number: 3 (lower is better)
Translates to: LSREEPCHTARRTPEEPGPFWLL*TLQVIR
Trigger: TCTGATGACCTGGAGAGTCAACAACAACCAGAAAGG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGGTCTTCTTCAGCACTaGGAAGGCACAAAACTTCGT +
Preference number: 3 (lower is better)
Translates to: LSREEPCHTARRTPEEPGGLLQH*EGTKLR
Trigger: ACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAGACC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR TCA 72 bp CTGACAGCTCCACAGCGGGACTGGGAAGATTTAGGCTaGCCAGGTCTTCTTCAGCACTTGGAAGGCACAAAA +
Preference number: 3 (lower is better)
Translates to: LTAPQRDWEDLG*PGLLQHLEGTK
Trigger: TTTTGTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGCTGTGGAGCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTTCAGAGGAAATATGGTaGCCGTGTAGGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCSEEIW*PCRQMS
Trigger: AGACATCTGCCTACACGGCAACCATATTTCCTCTGA...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCATTCTGGCTCCATCTTaGCAGGACCTGGAGAGATTG +
Preference number: 3 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSILAPS*QDLERL
Trigger: CAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAAT...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTGCAGGGCCTGTGTACTaGTCTAGAGAGGAACCCTGC +
Preference number: 3 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPAAGPVY*SREEPC
Trigger: GCAGGGTTCCTCTCTAGACAAGTACACAGGCCCTGC...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CCA 72 bp CCTCAGGTTCCGCAGCAAAGTCCCACCGGAACTTCTTaGTCAGGTGAGCTTGGAACTTTTCAGCTTTCTTTC +
Preference number: 3 (lower is better)
Translates to: PQVPQQSPTGTS*SGELGTFQLSF
Trigger: GAAAGAAAGCTGAAAAGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGGACTTTGCTGCGGAACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR-3UTR CAA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTATTCTGGCTCCATCTTaGCAGGACCTGGAGAGATTG +
Preference number: 3 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCILAPS*QDLERL
Trigger: CAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAAT...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCTCAGAGGAAATATGGTaGCCGTGTAGGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSSEEIW*PCRQMS
Trigger: AGACATCTGCCTACACGGCAACCATATTTCCTCTGA...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAGCAGGGCCTGTGTACTaGTCTAGAGAGGAACCCTGC +
Preference number: 3 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSAGPVY*SREEPC
Trigger: GCAGGGTTCCTCTCTAGACAAGTACACAGGCCCTGC...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTATTCTGGCTCCATCTTaGCAGGACCTGGAGAGATTG +
Preference number: 3 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFILAPS*QDLERL
Trigger: CAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAAT...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGCAATCCAGGGTTTCTaGTTTCCTAAGCTCCTATGG +
Preference number: 3 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACAIQGF*FPKLLW
Trigger: CCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGC...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGCAATCCAGGGTTTCTaGTTTCCTAAGCTCCTATGG +
Preference number: 3 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCAIQGF*FPKLLW
Trigger: CCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGC...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTATTCTGGCTCCATCTTaGCAGGACCTGGAGAGATTG +
Preference number: 3 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPAILAPS*QDLERL
Trigger: CAATCTCTCCAGGTCCTGCAAAGATGGAGCCAGAAT...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTTCAGAGGAAATATGGTaGCCGTGTAGGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFSEEIW*PCRQMS
Trigger: AGACATCTGCCTACACGGCAACCATATTTCCTCTGA...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTCTTGGTCAGGTGAGCTaGGAACTTTTCAGCTTTCTT +
Preference number: 3 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACLGQVS*ELFSFL
Trigger: AAGAAAGCTGAAAAGTTCCAAGCTCACCTGACCAAG...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
3UTR-3UTR CAA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CTTCTTCAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTGGTCTTCTTCAGCACTaGGAAGGCACAAAACTTCGT +
Preference number: 3 (lower is better)
Translates to: LLQHLEGTKLRKGLKKPAGLLQH*EGTKLR
Trigger: ACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAGACC...AGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR GCA 72 bp TTGGTTCAATTCCTTCTCATTCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LVQFLLIQRKYG*RVGRCLLGACV
Trigger: CACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: YLARGRRQFGLISPSPFIMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR CCA 72 bp ACTTTTGGTTCAATTCCTTCTCATTCAGAGGAAATATaGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTG +
Preference number: 3 (lower is better)
Translates to: TFGSIPSHSEEI*LPCRQMSPRSV
Trigger: CACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAGAAGGAATTGAACCAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTGCAATCCAGGGTTTCTaGTTTCCTAAGCTCCTATGG +
Preference number: 3 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGAIQGF*FPKLLW
Trigger: CCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGC...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACCTTTCTGGTTGTTGTaGACTCTCCAGGTCATCAGA +
Preference number: 3 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKPFWLL*TLQVIR
Trigger: TCTGATGACCTGGAGAGTCAACAACAACCAGAAAGG...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAGGTCTTCTTCAGCACTaGGAAGGCACAAAACTTCGT +
Preference number: 3 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKGLLQH*EGTKLR
Trigger: ACGAAGTTTTGTGCCTTCCAAGTGCTGAAGAAGACC...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp AAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGAAACCTTTATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: KAQNFVKALRSLLWAETFMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...AAAGGTTTCTGCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR TCA 72 bp ACAGGAGAGTGGTTATACCAAGGTATAAACACAGAATaGAATATGCTGTGGCAGATAAAAGTGATGCCGTGG +
Preference number: 3 (lower is better)
Translates to: TGEWLYQGINTE*NMLWQIKVMPW
Trigger: CCACGGCATCACTTTTATCTGCCACAGCATATTTCATTCTGTGTTTATACCTTGGTATAACCACTCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
3UTR-3UTR CAA 90 bp TCTCCAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: SPRKQVEAKVSTSRDSHSMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...TGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp GTTCCCCAAAACAGGAGAGTGGTTATACCAAGGTATAAACACAGAATGAAATATTGTAATCCCAACATTTaGAGAGGCCAAAGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: VPQNRRVVIPRYKHRMKYCNPNI*RGQSGR
Trigger: CCTCCCACTTTGGCCTCTCAAAATGTTGGGATTACA...ATATTTCATTCTGTGTTTATACCTTGGTATAACCACTCTCCTGTTTTGGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397286.7
3UTR-3UTR CAA 90 bp AACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAACATGGTATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: NKWKQKSQPAGILIQKHGMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...ACCATGTTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
3UTR-3UTR CAA 90 bp CAAGGAAACAAGTGGAAGCAAAAGTCTCAACCAGCAGGGATTCTCATTCAAAAAATGGGTACAGCCTCTTaGGCAATGAAGAAATATATT +
Preference number: 3 (lower is better)
Translates to: QGNKWKQKSQPAGILIQKMGTAS*AMKKYI
Trigger: AATATATTTCTTCATTGCCAAAGAGGCTGTACCCAT...TTTTTGAATGAGAATCCCTGCTGGTTGAGACTTTTGCTTCCACTTGTTTCCTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCCTCGCAGCTGAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGTGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSQLRALPELAHLDALREWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...CTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGCTCTCAGCTGCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR TCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAACACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGCTCCACCACCAGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: ESAPRVSPSRCPQGAPPPGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...TGGTGGTGGAGCTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR TCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGCTGCGTGGGCAGCTCTaGGAAGCGGATCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGLRGQL*EADLCP
Trigger: GGGACAGAGATCCGCTTCTCAGAGCTGCCCACGCAG...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGCTCCACCACCAGTCAGCCCCCGCTGGTaGAGGCTAAGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: ESAPRVSPSRCPQGAPPPVSPRW*RLRKKP
Trigger: GGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGAC...TGGTGGTGGAGCTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR GCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGTGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGCTCCACCACCAGGAGGGTCCCACTTCTaGGTGAGGCCTCGGAATGGA +
Preference number: 4 (lower is better)
Translates to: ESAPRVSPSRCPQGAPPPGGSHF*VRPRNG
Trigger: TCCATTCCGAGGCCTCACCCAGAAGTGGGACCCTCC...TGGTGGTGGAGCTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR TCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGCTGCGTGGGCAGCTCTaGGAAGCGGATCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLLRGQL*EADLCP
Trigger: GGGACAGAGATCCGCTTCTCAGAGCTGCCCACGCAG...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp ATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGCTGCGTGGGCAGCTCTaGGAAGCGGATCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MLWQIKVMPWAGCGDSRLLRGQL*EADLCP
Trigger: GGGACAGAGATCCGCTTCTCAGAGCTGCCCACGCAG...CAGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR TCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCACGGTGGCTCTGGTaGGGAAGGGGAGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTSRWLW*GRGGSH
Trigger: GTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGA...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TCCACCACCACCGGGGCACAGTCCTCAGGTTCCGCAGCAAAGTCCCACCGGAACCTCAGACTCTGGGGCTaGGGACAGGTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: STTTGAQSSGSAAKSHRNLRLWG*GQVYLF
Trigger: GAAGAGGTAGACCTGTCCCCAGCCCCAGAGTCTGAG...GTTCCGGTGGGACTTTGCTGCGGAACCTGAGGACTGTGCCCCGGTGGTGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGGCCCCACGCGGTCCTTaGTGTGCTTCATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGAPRGP*CASWRA
Trigger: TGCTCTCCATGAAGCACACCAAGGACCGCGTGGGGC...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGCATCATGGCTGCTTCTaGCCGGCACAGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGHHGCF*PAQEVQ
Trigger: CTGAACCTCCTGTGCCGGTCAGAAGCAGCCATGATG...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGGAAGAATGGCCCGTaGCTGCAGGTTCCGCCGGAT +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGKNGP*LQVPPD
Trigger: ATCCGGCGGAACCTGCAGGCACGGGCCATTCTTCCC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680639.1
CDS-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTTCTGCACGGCAGCCATaGGGCCAGTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSSARQP*GQWWVT
Trigger: GGTCACCCACCACTGGCCCCATGGCTGCCGTGCAGA...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAACTCAGACTCTGGGGCTaGGGACAGGTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGELRLWG*GQVYLF
Trigger: GAAGAGGTAGACCTGTCCCCAGCCCCAGAGTCTGAG...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp ATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGGGAGGTTGGCCCTCATaGCCTCCACCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: MLWQIKVMPWAGCGDSRLGGWPS*PPPQTL
Trigger: CAGAGTCTGAGGTGGAGGCCATGAGGGCCAACCTCC...CAGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAACTGGGAACATCTGCGTaGGCAGCTCTGAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGELGTSA*AALRSG
Trigger: TCCGCTTCTCAGAGCTGCCCACGCAGATGTTCCCAG...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGCTCCACCACCAGGTCCATGCTGTGCTTaGTTATCTCAGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ESAPRVSPSRCPQGAPPPGPCCA*LSQLAW
Trigger: CCACGCCAGCTGAGATAACCAAGCACAGCATGGACC...TGGTGGTGGAGCTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGGGTGAGGCCTCGGAATaGAACAGGTGGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGGEASE*NRWEVT
Trigger: TGTCACCTCCCACCTGTTCCATTCCGAGGCCTCACC...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCCTCGCAGCTGAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGTGTGAGCCCCAGTCTTaGAAAAGGATGGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PSQLRALPELAHLDALRECEPQS*KRMAQG
Trigger: TCCCTGTGCCATCCTTTTCCAAGACTGGGGCTCACA...CTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGCTCTCAGCTGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGCTTTGGCGTCTGACTaGAGCGACGGGGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTALASD*SDGGSG
Trigger: ACCGCTTCCCCCGTCGCTCCAGTCAGACGCCAAAGC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680639.1
CDS-3UTR TCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGTCTACCTCTTCCCTaGGTGTGCTCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGLPLP*VCSSAA
Trigger: TGCTGCGCTGGAGCACACTCAGGGAAGAGGTAGACC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCACTGCGTGGGCAGCTCTaGGAAGCGGATCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPLRGQL*EADLCP
Trigger: GGGACAGAGATCCGCTTCTCAGAGCTGCCCACGCAG...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TCCACCACCACCGGGGCACAGTCCTCAGGTTCCGCAGCAAAGTCCCACCGGAACCATAGTACAACAGTTTaGTGTCAGGGTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: STTTGAQSSGSAAKSHRNHSTTV*CQGGRA
Trigger: GGCCCTGCCACCCTGACATCAAACTGTTGTACTATG...GTTCCGGTGGGACTTTGCTGCGGAACCTGAGGACTGTGCCCCGGTGGTGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR GCA 90 bp TATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTAGCTCAGGATCCATCTaGACGGCAGCCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: YAVADKSDAVGRVWRLTPSSGSI*TAAMGP
Trigger: TGGCCCCATGGCTGCCGTGCAGATGGATCCTGAGCT...AGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR GCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTCAGCGGGGTAGATTCTaGCCCACGCGGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSQRGRF*PTRSLV
Trigger: CACCAAGGACCGCGTGGGGCAGAATCTACCCCGCTG...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGGGCTGCTGGGGAACTaGTTGTTGAGCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLGLLGN*LLSTVS
Trigger: GGAGACTGTGCTCAACAAGCAGTTCCCCAGCAGCCC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTAGAATGGCCCGTGCCTaGAGGTTCCGCCGGATGCAA +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTRMARA*RFRRMQ
Trigger: TTGCATCCGGCGGAACCTGCAGGCACGGGCCATTCT...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680639.1
CDS-3UTR CCA 90 bp AAATATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGTCTGCACGGCAGCCATaGGGCCAGTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: KYAVADKSDAVGRVWRLTSARQP*GQWWVT
Trigger: GGTCACCCACCACTGGCCCCATGGCTGCCGTGCAGA...CGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTTCACGCCCCGGAACTTaGGCCCGACCTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCSRPGT*ARPPRS
Trigger: ACTCCTGGGAGGTCGGGCCCAAGTTCCGGGGCGTGA...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTCACGCCCCGGAACTTaGGCCCGACCTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHSRPGT*ARPPRS
Trigger: ACTCCTGGGAGGTCGGGCCCAAGTTCCGGGGCGTGA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGCCCCACGCGGTCCTTaGTGTGCTTCATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: YAVADKSDAVGRVWRLTPAPRGP*CASWRA
Trigger: TGCTCTCCATGAAGCACACCAAGGACCGCGTGGGGC...AGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCTGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGAGGGTCCCACTTCTaGGTGAGGCCTCGGAATGGA +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGGSHF*VRPRNG
Trigger: TCCATTCCGAGGCCTCACCCAGAAGTGGGACCCTCC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCGGGTCGCGGGAAGAATaGCCCGTGCCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLGSREE*PVPAGS
Trigger: GGAACCTGCAGGCACGGGCCATTCTTCCCGCGACCC...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680639.1
CDS-3UTR TCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTGGTCTACCTCTTCCCTaGGTGTGCTCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSGLPLP*VCSSAA
Trigger: TGCTGCGCTGGAGCACACTCAGGGAAGAGGTAGACC...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCAGCGGGGTAGATTCTaGCCCACGCGGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHQRGRF*PTRSLV
Trigger: CACCAAGGACCGCGTGGGGCAGAATCTACCCCGCTG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGCCTCTTGGTAGCTTTTaGACTCAATGCCACAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGPLGSF*TQCHSG
Trigger: CCCGCTGTGGCATTGAGTGCAAAAGCTACCAAGAGG...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGGCTGCTGGGGAACTaGTTGTTGAGCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGLLGN*LLSTVS
Trigger: GGAGACTGTGCTCAACAAGCAGTTCCCCAGCAGCCC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTCAGCCATGGGGCCAGTaGTGGGTGACCAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTQPWGQ*WVTKRT
Trigger: GGTTCTTTTGGTCACCCACCACTGGCCCCATGGCTG...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTCTGCACGGCAGCCATaGGGCCAGTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLSARQP*GQWWVT
Trigger: GGTCACCCACCACTGGCCCCATGGCTGCCGTGCAGA...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGACTGTCAGCCCCCGCTaGTGCAGGCTAAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLTVSPR*CRLRKK
Trigger: TTTCTTCCTTAGCCTGCACCAGCGGGGGCTGACAGT...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACTCCACCTCAGACTCTaGGGCTGGGGACAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGLHLRL*GWGQVY
Trigger: GTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCCTCCACCTCAGACTCTaGGGCTGGGGACAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPLHLRL*GWGQVY
Trigger: GTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAG...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGGAGGTTGGCCCTCATaGCCTCCACCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPGGWPS*PPPQTL
Trigger: CAGAGTCTGAGGTGGAGGCCATGAGGGCCAACCTCC...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCGGAGGTTGGCCCTCATaGCCTCCACCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPGGWPS*PPPQTL
Trigger: CAGAGTCTGAGGTGGAGGCCATGAGGGCCAACCTCC...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAAACTGGTCCAGCTCCTaGAGGTTGGCCCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPNWSSS*RLALMA
Trigger: GGCCATGAGGGCCAACCTCCAGGAGCTGGACCAGTT...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAACTGGTCCAGCTCCTaGAGGTTGGCCCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPNWSSS*RLALMA
Trigger: GGCCATGAGGGCCAACCTCCAGGAGCTGGACCAGTT...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGCTTCAGGGTGGCATATaGGTAAGGCCCCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLLQGGI*VRPQEL
Trigger: CAGTTCCTGGGGCCTTACCCATATGCCACCCTGAAG...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATCCACTTCTTCAGGGTaGCATATGGGTAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGESTSSG*HMGKAP
Trigger: TGGGGCCTTACCCATATGCCACCCTGAAGAAGTGGA...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCGCCCCACGCGGTCCTTaGTGTGCTTCATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPAPRGP*CASWRA
Trigger: TGCTCTCCATGAAGCACACCAAGGACCGCGTGGGGC...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGCCCCACGCGGTCCTTaGTGTGCTTCATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPAPRGP*CASWRA
Trigger: TGCTCTCCATGAAGCACACCAAGGACCGCGTGGGGC...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGGGTCCATGCTGTGCTTaGTTATCTCAGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLGPCCA*LSQLAW
Trigger: CCACGCCAGCTGAGATAACCAAGCACAGCATGGACC...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGGGATCTCACCAAGCTaGTGGTACAGGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEGISPS*WYRMEM
Trigger: CATCTCCATCCTGTACCACCAGCTTGGTGAGATCCC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: YLARGRRQFGLISPSPFIRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGETSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGTCGGAATGGAACAGGTaGGAGGTGACAGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLSEWNR*EVTAPA
Trigger: TGCTGGTGCTGTCACCTCCCACCTGTTCCATTCCGA...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGGAGGGTCCCACTTCTaGGTGAGGCCTCGGAATGGA +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPGGSHF*VRPRNG
Trigger: TCCATTCCGAGGCCTCACCCAGAAGTGGGACCCTCC...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCGGTCTACCTCTTCCCTaGGTGTGCTCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLGLPLP*VCSSAA
Trigger: TGCTGCGCTGGAGCACACTCAGGGAAGAGGTAGACC...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTAGCTCAGGATCCATCTaGACGGCAGCCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCSSGSI*TAAMGP
Trigger: TGGCCCCATGGCTGCCGTGCAGATGGATCCTGAGCT...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGTCAGCCCCCGCTGGTaGAGGCTAAGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHVSPRW*RLRKKP
Trigger: GGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGAC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AAATATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGGTCAGCCCCCGCTGGTaGAGGCTAAGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: KYAVADKSDAVGRVWRLTVSPRW*RLRKKP
Trigger: GGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGAC...CGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGTCAGCCCCCGCTGGTaGAGGCTAAGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCVSPRW*RLRKKP
Trigger: GGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGAC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp ATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGCCTCTTGGTAGCTTTTaGACTCAATGCCACAGCGGG +
Preference number: 4 (lower is better)
Translates to: MLWQIKVMPWAGCGDSRLPLGSF*TQCHSG
Trigger: CCCGCTGTGGCATTGAGTGCAAAAGCTACCAAGAGG...CAGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR GCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGCCTCTTGGTAGCTTTTaGACTCAATGCCACAGCGGG +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLPLGSF*TQCHSG
Trigger: CCCGCTGTGGCATTGAGTGCAAAAGCTACCAAGAGG...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAGGGCTGCTGGGGAACTaGTTGTTGAGCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLGLLGN*LLSTVS
Trigger: GGAGACTGTGCTCAACAAGCAGTTCCCCAGCAGCCC...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAAGGAGCCGCTTCCAATaGTCAAATGCCTCGTACACA +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGERSRFQ*SNASYT
Trigger: TGTGTACGAGGCATTTGAGCATTGGAAGCGGCTCCT...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CTTGGAACTTTTCAGCTTTCTTTCTCAGGGTGGCATCCACGGCAATGCTGCAGGTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGTFQLSFSGWHPRQCCRWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...CCTGCAGCATTGCCGTGGATGCCACCCTGAGAAAGAAAGCTGAAAAGTTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR GCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCCAGCCATGGGGCCAGTaGTGGGTGACCAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPQPWGQ*WVTKRT
Trigger: GGTTCTTTTGGTCACCCACCACTGGCCCCATGGCTG...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGTCTGCACGGCAGCCATaGGGCCAGTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMSARQP*GQWWVT
Trigger: GGTCACCCACCACTGGCCCCATGGCTGCCGTGCAGA...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCTCTGCACGGCAGCCATaGGGCCAGTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSSARQP*GQWWVT
Trigger: GGTCACCCACCACTGGCCCCATGGCTGCCGTGCAGA...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGTCACGCCCCGGAACTTaGGCCCGACCTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMSRPGT*ARPPRS
Trigger: ACTCCTGGGAGGTCGGGCCCAAGTTCCGGGGCGTGA...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGAGGAAGTGGATGCCTaGAGGGATCATCTTCACGCC +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTEEVDA*RDHLHA
Trigger: GGCGTGAAGATGATCCCTCCAGGCATCCACTTCCTC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCACTCAGACTCTGGGGCTaGGGACAGGTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPLRLWG*GQVYLF
Trigger: GAAGAGGTAGACCTGTCCCCAGCCCCAGAGTCTGAG...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AAATATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCTCCACCTCAGACTCTaGGGCTGGGGACAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: KYAVADKSDAVGRVWRLTLHLRL*GWGQVY
Trigger: GTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAG...CGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCTCCACCTCAGACTCTaGGGCTGGGGACAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHLHLRL*GWGQVY
Trigger: GTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTCTCCACCTCAGACTCTaGGGCTGGGGACAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCLHLRL*GWGQVY
Trigger: GTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAG...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGGAGGTTGGCCCTCATaGCCTCCACCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCGGWPS*PPPQTL
Trigger: CAGAGTCTGAGGTGGAGGCCATGAGGGCCAACCTCC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AAATATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGAACTGGTCCAGCTCCTaGAGGTTGGCCCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: KYAVADKSDAVGRVWRLTNWSSS*RLALMA
Trigger: GGCCATGAGGGCCAACCTCCAGGAGCTGGACCAGTT...CGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACAACTGGTCCAGCTCCTaGAGGTTGGCCCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHNWSSS*RLALMA
Trigger: GGCCATGAGGGCCAACCTCCAGGAGCTGGACCAGTT...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTCTTCAGGGTGGCATATaGGTAAGGCCCCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: YAVADKSDAVGRVWRLTPLQGGI*VRPQEL
Trigger: CAGTTCCTGGGGCCTTACCCATATGCCACCCTGAAG...AGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAACCTTGGTGTGCTTCATaGAGAGCACAGGTAGCACAT +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEPWCAS*RAQVAH
Trigger: ATGTGCTACCTGTGCTCTCCATGAAGCACACCAAGG...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGCCCCACGCGGTCCTTaGTGTGCTTCATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCAPRGP*CASWRA
Trigger: TGCTCTCCATGAAGCACACCAAGGACCGCGTGGGGC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACTGGGAACATCTGCGTaGGCAGCTCTGAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGLGTSA*AALRSG
Trigger: TCCGCTTCTCAGAGCTGCCCACGCAGATGTTCCCAG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTCTTGGTTATCTCAGCTaGCGTGGCACCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YAVADKSDAVGRVWRLTPLGYLS*RGTLWE
Trigger: TTCCCAGAGGGTGCCACGCCAGCTGAGATAACCAAG...AGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp TATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGGTCCATGCTGTGCTTaGTTATCTCAGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: YAVADKSDAVGRVWRLTPGPCCA*LSQLAW
Trigger: CCACGCCAGCTGAGATAACCAAGCACAGCATGGACC...AGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGTGTGGTGCTTCATCATaGCTGCTTCTGACCGGCACA +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLCGASS*LLLTGT
Trigger: TGTGCCGGTCAGAAGCAGCCATGATGAAGCACCACA...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGCCCACCGGAACTTCTTaGTCAGGTGAGCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLPTGTS*SGELGT
Trigger: AGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGG...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTAGGACTGCAGCCCTGTaGGAAGGGGCCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCRTAAL*EGAPRS
Trigger: GCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGTCCT...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTCATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTTGGGCATGTTCAGGATaGCCACAGTGGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSWACSG*PQWPLQ
Trigger: TTGAAGGGGCCACTGTGGTCATCCTGAACATGCCCA...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGATGGGCATGTTCAGGATaGCCACAGTGGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGWACSG*PQWPLQ
Trigger: TTGAAGGGGCCACTGTGGTCATCCTGAACATGCCCA...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAGATGAAGTTGGTGAGTaGGATCCACTTCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEDEVGE*DPLLQG
Trigger: ACCCTGAAGAAGTGGATCTCACTCACCAACTTCATC...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCTGGGGAACTGCTTGTTaGGCACAGTCTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPWGTAC*AQSPGH
Trigger: ATGCCCTGGAGACTGTGCTCAACAAGCAGTTCCCCA...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTCATCATGGCTGCTTCTaGCCGGCACAGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCHHGCF*PAQEVQ
Trigger: CTGAACCTCCTGTGCCGGTCAGAAGCAGCCATGATG...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCATCATGGCTGCTTCTaGCCGGCACAGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHHHGCF*PAQEVQ
Trigger: CTGAACCTCCTGTGCCGGTCAGAAGCAGCCATGATG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTTCACGGTGGCTCTGGTaGGGAAGGGGAGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCSRWLW*GRGGSH
Trigger: GTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGA...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCATTACTCCGGTGACTaGCAGCTCCACAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLHYSGD*QLHSGT
Trigger: AGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATG...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCAGCTCATTACTCCGGTaGCTGACAGCTCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLSSLLR*LTAPQR
Trigger: CCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCT...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp ATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGAGTGGAGGAAGTGGATaGCTGGAGGGATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: MLWQIKVMPWAGCGDSRLSGGSG*LEGSSS
Trigger: TGAAGATGATCCCTCCAGGCATCCACTTCCTCCACT...CAGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR GCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGAGTGGAGGAAGTGGATaGCTGGAGGGATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLSGGSG*LEGSSS
Trigger: TGAAGATGATCCCTCCAGGCATCCACTTCCTCCACT...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGGTCAGCCCCCGCTGGTaGAGGCTAAGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLVSPRW*RLRKKP
Trigger: GGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGAC...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCCAGCGGGGTAGATTCTaGCCCACGCGGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSQRGRF*PTRSLV
Trigger: CACCAAGGACCGCGTGGGGCAGAATCTACCCCGCTG...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAAAGCTTTTGCACTCAATaGCACAGCGGGGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGESFCTQ*HSGVDS
Trigger: AGAATCTACCCCGCTGTGGCATTGAGTGCAAAAGCT...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGGGCTGCTGGGGAACTaGTTGTTGAGCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHGLLGN*LLSTVS
Trigger: GGAGACTGTGCTCAACAAGCAGTTCCCCAGCAGCCC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KVTNQLLRPPGQSRVSCFWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...GAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTTGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAATGGAGAGGCCAGGACTaGAGCCCTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEWRGQD*SPVGRG
Trigger: GCCCCTTCCCACAGGGCTGCAGTCCTGGCCTCTCCA...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTTCTGCACGGCAGCCATaGGGCCAGTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCSARQP*GQWWVT
Trigger: GGTCACCCACCACTGGCCCCATGGCTGCCGTGCAGA...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAATCACGCCCCGGAACTTaGGCCCGACCTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEESRPGT*ARPPRS
Trigger: ACTCCTGGGAGGTCGGGCCCAAGTTCCGGGGCGTGA...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTTCACGCCCCGGAACTTaGGCCCGACCTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCSRPGT*ARPPRS
Trigger: ACTCCTGGGAGGTCGGGCCCAAGTTCCGGGGCGTGA...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGAGGAAGTGGATGCCTaGAGGGATCATCTTCACGCC +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPEEVDA*RDHLHA
Trigger: GGCGTGAAGATGATCCCTCCAGGCATCCACTTCCTC...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTACTGTCAGCCCCCGCTaGTGCAGGCTAAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSTVSPR*CRLRKK
Trigger: TTTCTTCCTTAGCCTGCACCAGCGGGGGCTGACAGT...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAACTGTCAGCCCCCGCTaGTGCAGGCTAAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPTVSPR*CRLRKK
Trigger: TTTCTTCCTTAGCCTGCACCAGCGGGGGCTGACAGT...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTACTTCAGGGTGGCATATaGGTAAGGCCCCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLLQGGI*VRPQEL
Trigger: CAGTTCCTGGGGCCTTACCCATATGCCACCCTGAAG...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCCTTCAGGGTGGCATATaGGTAAGGCCCCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPLQGGI*VRPQEL
Trigger: CAGTTCCTGGGGCCTTACCCATATGCCACCCTGAAG...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACTTCAGGGTGGCATATaGGTAAGGCCCCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGLQGGI*VRPQEL
Trigger: CAGTTCCTGGGGCCTTACCCATATGCCACCCTGAAG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTCTCTGTCCCGGCTCTaGGCTTCATCTCTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHSLSRL*ASSLVA
Trigger: GGCTACCAGAGATGAAGCCCAGAGCCGGGACAGAGA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AAATATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCTGGGAACATCTGCGTaGGCAGCTCTGAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: KYAVADKSDAVGRVWRLTLGTSA*AALRSG
Trigger: TCCGCTTCTCAGAGCTGCCCACGCAGATGTTCCCAG...CGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCTGGGAACATCTGCGTaGGCAGCTCTGAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLLGTSA*AALRSG
Trigger: TCCGCTTCTCAGAGCTGCCCACGCAGATGTTCCCAG...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCTGGGAACATCTGCGTaGGCAGCTCTGAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHLGTSA*AALRSG
Trigger: TCCGCTTCTCAGAGCTGCCCACGCAGATGTTCCCAG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCTGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTTGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: YLARGRRQFGLISPSPFIWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCACTTGGTTATCTCAGCTaGCGTGGCACCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPLGYLS*RGTLWE
Trigger: TTCCCAGAGGGTGCCACGCCAGCTGAGATAACCAAG...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTCTTGGTTATCTCAGCTaGCGTGGCACCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSLGYLS*RGTLWE
Trigger: TTCCCAGAGGGTGCCACGCCAGCTGAGATAACCAAG...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCCTTGGTTATCTCAGCTaGCGTGGCACCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPLGYLS*RGTLWE
Trigger: TTCCCAGAGGGTGCCACGCCAGCTGAGATAACCAAG...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCAGGTCCATGCTGTGCTTaGTTATCTCAGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPGPCCA*LSQLAW
Trigger: CCACGCCAGCTGAGATAACCAAGCACAGCATGGACC...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGGTCCATGCTGTGCTTaGTTATCTCAGCTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGGPCCA*LSQLAW
Trigger: CCACGCCAGCTGAGATAACCAAGCACAGCATGGACC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp ATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGATCTCACCAAGCTGGTaGTACAGGATGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: MLWQIKVMPWAGCGDSRLISPSW*YRMEMR
Trigger: CCTCATCTCCATCCTGTACCACCAGCTTGGTGAGAT...CAGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTGGGATCTCACCAAGCTaGTGGTACAGGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTGISPS*WYRMEM
Trigger: CATCTCCATCCTGTACCACCAGCTTGGTGAGATCCC...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGATGGGAAGAAGTAAATaGAGAGGCCAGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLMGRSK*RGQDCS
Trigger: GCTGCAGTCCTGGCCTCTCCATTTACTTCTTCCCAT...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGAGAGATTGCTGCCCTaGCAGGTCCCAGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCERLLP*QVPGWE
Trigger: TTCCCATCCTGGGACCTGCCAGGGCAGCAATCTCTC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTACATCTTTGCAGGACCTaGAGAGATTGCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLHLCRT*RDCCPG
Trigger: GCCAGGGCAGCAATCTCTCCAGGTCCTGCAAAGATG...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTGTTAGCACCAAGGCCTaGCTGATGGGGAACCCACAA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSVSTKA*LMGNPQ
Trigger: TTGTGGGTTCCCCATCAGCCAGGCCTTGGTGCTAAC...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGAGCTCCACCACCAAGAATGGGATTTCGATaGAGAAAGCTGAAGCTGACC +
Preference number: 4 (lower is better)
Translates to: ESAPRVSPSRCPQGAPPPRMGFR*RKLKLT
Trigger: GGTCAGCTTCAGCTTTCTCCATCGAAATCCCATTCT...TGGTGGTGGAGCTCCCTGAGGGCATCGAGATGGGCTAACTCGGGGAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680412.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATGGGAGATGACCCACTaGGCCTCTGGACAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPWEMTH*ASGQEN
Trigger: ATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCA...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCACCCTTCATTGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: YLARGRRQFGLISPSPFIGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...AATGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTGTGAGCCCCAGTCTTaGAAAAGGATGGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTCEPQS*KRMAQG
Trigger: TCCCTGTGCCATCCTTTTCCAAGACTGGGGCTCACA...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGCTGCGTGGGCAGCTCTaGGAAGCGGATCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PPARLNPAASLETLFPIKLRGQL*EADLCP
Trigger: GGGACAGAGATCCGCTTCTCAGAGCTGCCCACGCAG...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAACTGCGTGGGCAGCTCTaGGAAGCGGATCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEELRGQL*EADLCP
Trigger: GGGACAGAGATCCGCTTCTCAGAGCTGCCCACGCAG...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTGGGGAACTGCTTGTTaGGCACAGTCTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHWGTAC*AQSPGH
Trigger: ATGCCCTGGAGACTGTGCTCAACAAGCAGTTCCCCA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGCATCATGGCTGCTTCTaGCCGGCACAGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLHHGCF*PAQEVQ
Trigger: CTGAACCTCCTGTGCCGGTCAGAAGCAGCCATGATG...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACCTGTAAGGTGCTGGTaGGGAAGTTGTCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGPVRCW*GSCLGR
Trigger: TCTCCCAAGACAACTTCCTCACCAGCACCTTACAGG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGGGCGGCAATTCGGGCTaGTCTCCCCATCACCCTTCA +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMGGNSG*SPHHPS
Trigger: TGAAGGGTGATGGGGAGATCAGCCCGAATTGCCGCC...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCACCAGCAAGGCCTCTaGGGCCAGGGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFHQQGL*GQGPHP
Trigger: TGGGTGTGGACCCTGGCCTCAGAGGCCTTGCTGGTG...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp AGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCCATAGTACAACAGTTTaGTGTCAGGGTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPLLLFSKRQAAIRADLPHSTTV*CQGGRA
Trigger: GGCCCTGCCACCCTGACATCAAACTGTTGTACTATG...GGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATTTTGGATGTTTGATTaGAGGCTGTCATCGCCACGA +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGEFWMFD*RLSSPR
Trigger: TCGTGGCGATGACAGCCTTCAATCAAACATCCAAAA...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000679667.1
ENST00000680247.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAACAGCGGGGTAGATTCTaGCCCACGCGGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEQRGRF*PTRSLV
Trigger: CACCAAGGACCGCGTGGGGCAGAATCTACCCCGCTG...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCAGCGGGGTAGATTCTaGCCCACGCGGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KVTNQLLRPPGQSRVSCFQRGRF*PTRSLV
Trigger: CACCAAGGACCGCGTGGGGCAGAATCTACCCCGCTG...GAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTACCTCTTGGTAGCTTTTaGACTCAATGCCACAGCGGG +
Preference number: 4 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLPLGSF*TQCHSG
Trigger: CCCGCTGTGGCATTGAGTGCAAAAGCTACCAAGAGG...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp ATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGCCTGCATAGCTCAGGTCCATaGTGTGCTTGGTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: MLWQIKVMPWAGCGDSRLHSSGP*CAWLSQ
Trigger: CTGAGATAACCAAGCACAGCATGGACCTGAGCTATG...CAGGCGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTAGGAGCCGCTTCCAATaGTCAAATGCCTCGTACACA +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTRSRFQ*SNASYT
Trigger: TGTGTACGAGGCATTTGAGCATTGGAAGCGGCTCCT...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCTAGAGAGGAACCCTaGCACACAGCACGAAGGACT +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPSREEP*HTARRT
Trigger: AGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGA...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATCAGTAAAGGTTCCTTaGCCTGGGGCTAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPSVKVP*PGARSG
Trigger: ACCTGACCTAGCCCCAGGGCAAGGAACCTTTACTGA...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000679667.1
ENST00000680247.1
ENST00000680639.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGCAGCCATGGGGCCAGTaGTGGGTGACCAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLQPWGQ*WVTKRT
Trigger: GGTTCTTTTGGTCACCCACCACTGGCCCCATGGCTG...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTTCTGCACGGCAGCCATaGGGCCAGTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFSARQP*GQWWVT
Trigger: GGTCACCCACCACTGGCCCCATGGCTGCCGTGCAGA...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AAATATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACTCACGGAGGAAGTGGATGCCTaGAGGGATCATCTTCACGCC +
Preference number: 4 (lower is better)
Translates to: KYAVADKSDAVGRVWRLTEEVDA*RDHLHA
Trigger: GGCGTGAAGATGATCCCTCCAGGCATCCACTTCCTC...CGTGAGTCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR CCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCACTGTCAGCCCCCGCTaGTGCAGGCTAAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLTVSPR*CRLRKK
Trigger: TTTCTTCCTTAGCCTGCACCAGCGGGGGCTGACAGT...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGCTCAGACTCTGGGGCTaGGGACAGGTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLLRLWG*GQVYLF
Trigger: GAAGAGGTAGACCTGTCCCCAGCCCCAGAGTCTGAG...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCCTCCACCTCAGACTCTaGGGCTGGGGACAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSLHLRL*GWGQVY
Trigger: GTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAG...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGCTCCACCTCAGACTCTaGGGCTGGGGACAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMLHLRL*GWGQVY
Trigger: GTAGACCTGTCCCCAGCCCCAGAGTCTGAGGTGGAG...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTCTTCAGGGTGGCATATaGGTAAGGCCCCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCLQGGI*VRPQEL
Trigger: CAGTTCCTGGGGCCTTACCCATATGCCACCCTGAAG...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGATCCACTTCTTCAGGGTaGCATATGGGTAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGSTSSG*HMGKAP
Trigger: TGGGGCCTTACCCATATGCCACCCTGAAGAAGTGGA...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGGCCCCACGCGGTCCTTaGTGTGCTTCATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMAPRGP*CASWRA
Trigger: TGCTCTCCATGAAGCACACCAAGGACCGCGTGGGGC...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGCTGGGAACATCTGCGTaGGCAGCTCTGAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLLGTSA*AALRSG
Trigger: TCCGCTTCTCAGAGCTGCCCACGCAGATGTTCCCAG...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAATGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTTGGCGTGGCACCCTCTaGGAACATCTGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSEEIWLPCRQMSPRSVCWRGTL*EHLRGQ
Trigger: CTGCCCACGCAGATGTTCCCAGAGGGTGCCACGCCA...ACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACCTTGGTTATCTCAGCTaGCGTGGCACCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHLGYLS*RGTLWE
Trigger: TTCCCAGAGGGTGCCACGCCAGCTGAGATAACCAAG...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCATGTGGTGCTTCATCATaGCTGCTTCTGACCGGCACA +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPCGASS*LLLTGT
Trigger: TGTGCCGGTCAGAAGCAGCCATGATGAAGCACCACA...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTATCTCACCAAGCTGGTaGTACAGGATGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTISPSW*YRMEMR
Trigger: CCTCATCTCCATCCTGTACCACCAGCTTGGTGAGAT...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGGGATCTCACCAAGCTaGTGGTACAGGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGGISPS*WYRMEM
Trigger: CATCTCCATCCTGTACCACCAGCTTGGTGAGATCCC...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCCACCCACCGGAACTTCTTaGTCAGGTGAGCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: VLCSYLARGRRQFGLISPPTGTS*SGELGT
Trigger: AGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGG...TGGGGAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTCTAGAGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGACCCACCGGAACTTCTTaGTCAGGTGAGCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: LSREEPCHTARRTPEEPGPTGTS*SGELGT
Trigger: AGTTCCAAGCTCACCTGACCAAGAAGTTCCGGTGGG...TCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTGGCAGGTCCCAGGATaGGAAGAAGTAAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTWQVPG*EEVNGE
Trigger: CTCTCCATTTACTTCTTCCCATCCTGGGACCTGCCA...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp AGAGGAACCCTGCCACACAGCACGAAGGACTCCCGAGGAACCAGGAGCTCATTAACTTCTCAGACCCCCTaGGCAATCCAGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RGTLPHSTKDSRGTRSSLTSQTP*AIQGFL
Trigger: CAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGT...TAATGAGCTCCTGGTTCCTCGGGAGTCCTTCGTGCTGTGTGGCAGGGTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTGGGAGATGACCCACTaGGCCTCTGGACAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHWEMTH*ASGQEN
Trigger: ATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGTCCACACCCACCTTaGGAGATGACCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEGPHPP*EMTHWA
Trigger: GGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGGGAGGGTCCCACTTCTaGGTGAGGCCTCGGAATGGA +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMGGSHF*VRPRNG
Trigger: TCCATTCCGAGGCCTCACCCAGAAGTGGGACCCTCC...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGAGTCTTGGAAAAGGATaGCACAGGGACTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGSLGKG*HRDCDH
Trigger: ATGATCACAGTCCCTGTGCCATCCTTTTCCAAGACT...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTTGTGAGCCCCAGTCTTaGAAAAGGATGGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSCEPQS*KRMAQG
Trigger: TCCCTGTGCCATCCTTTTCCAAGACTGGGGCTCACA...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp CCAGGGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATCTCATTCAAAAACATaGTGTGAGCCCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGSTPTLGDDPLGLWTGESHSKT*CEPQSW
Trigger: CCAAGACTGGGGCTCACACCATGTTTTTGAATGAGA...TTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR CCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGAAGTTCTCCAGCTTTaGCGTCTGACTGGAGCGACG +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCEVLQL*RLTGAT
Trigger: CGTCGCTCCAGTCAGACGCCAAAGCTGGAGAACTTC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680639.1
CDS-3UTR CCA 90 bp GGTCCACACCCACCTTGGGAGATGACCCACTGGGCCTCTGGACAGGAGAATGGGTCCTGTGATATAATCTaGGGTGCCTTGTACCTTTCC +
Preference number: 4 (lower is better)
Translates to: GPHPPWEMTHWASGQENGSCDII*GALYLS
Trigger: GGAAAGGTACAAGGCACCCCAGATTATATCACAGGA...CCCATTCTCCTGTCCAGAGGCCCAGTGGGTCATCTCCCAAGGTGGGTGTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679667.1
ENST00000680247.1
ENST00000680639.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CTCATTCAGAGGAAATATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGGTCTACCTCTTCCCTaGGTGTGCTCCAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LIQRKYGCRVGRCLLGACGLPLP*VCSSAA
Trigger: TGCTGCGCTGGAGCACACTCAGGGAAGAGGTAGACC...ACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATATTTCCTCTGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp AGAATGAAATATGCTGTGGCAGATAAAAGTGATGCCGTGGGCCGGGTGTGGCGACATCATGGCTGCTTCTaGCCGGCACAGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RMKYAVADKSDAVGRVWRHHGCF*PAQEVQ
Trigger: CTGAACCTCCTGTGCCGGTCAGAAGCAGCCATGATG...TCGCCACACCCGGCCCACGGCATCACTTTTATCTGCCACAGCATATTTCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397286.7
CDS-3UTR TCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCCTGTAAGGTGCTGGTaGGGAAGTTGTCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLPVRCW*GSCLGR
Trigger: TCTCCCAAGACAACTTCCTCACCAGCACCTTACAGG...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCGCACCAAGGCCTGGCTaGTGGGGAACCCACAAATGT +
Preference number: 4 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGAPRPG*WGTHKC
Trigger: ACATTTGTGGGTTCCCCATCAGCCAGGCCTTGGTGC...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TATGGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGGACCACCTGCTAGATTaGATCCAGCTGCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: YGCRVGRCLLGACVCKSLDHLLD*IQLPPL
Trigger: CAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGGTC...CAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TTGTTGTTGACTCTCCAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: LLLTLQVIRNSHGGSGEEGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...TTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTGGAGAGTCAACAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGGGTCCCACTTCTGGGTaGGGCCTCGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: PPARLNPAASLETLFPIKGPTSG*GLGMEQ
Trigger: CTGTTCCATTCCGAGGCCTCACCCAGAAGTGGGACC...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCGAGGAACCAGGAGCTCATTACTCCGGTGACTGACAGCTCCACAGCGGGACTGCTTTCTGGTTGTTGTTaGCTCTCCAGGTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: PRNQELITPVTDSSTAGLLSGCC*LSRSSE
Trigger: TTCTGATGACCTGGAGAGTCAACAACAACCAGAAAG...CAGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCTCCTGGTTCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp GTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTTCTTGGGAAGATTTAGGCTaGCCAGGTCTTCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: VIRNSHGGSGEEGEGPTSWEDLG*PGLLQH
Trigger: GTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCA...AGAAGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGCATTACTCCGGTGACTaGCAGCTCCACAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMHYSGD*QLHSGT
Trigger: AGTCCCGCTGTGGAGCTGTCAGTCACCGGAGTAATG...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CAGCACTTGGAAGGCACAAAACTTCGTAAAGGCCTTAAGAAGCCTGCTCTGGGCAGCTCATTACTCCGGTaGCTGACAGCTCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: QHLEGTKLRKGLKKPALGSSLLR*LTAPQR
Trigger: CCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCT...GCCCAGAGCAGGCTTCTTAAGGCCTTTACGAAGTTTTGTGCCTTCCAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGAGCTCATTACTCCGGTaGCTGACAGCTCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMSSLLR*LTAPQR
Trigger: CCGCTGTGGAGCTGTCAGTCACCGGAGTAATGAGCT...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCCATAGTACAACAGTTTaGTGTCAGGGTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLHSTTV*CQGGRA
Trigger: GGCCCTGCCACCCTGACATCAAACTGTTGTACTATG...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR TCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTTCCAGCTTTGGCGTCTaGCTGGAGCGACGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFSSFGV*LERRGK
Trigger: CTTCCCCCGTCGCTCCAGTCAGACGCCAAAGCTGGA...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000680639.1
CDS-3UTR GCA 90 bp AAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCAGCTCAGGATCCATCTaGACGGCAGCCATGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KVTNQLLRPPGQSRVSCFSSGSI*TAAMGP
Trigger: TGGCCCCATGGCTGCCGTGCAGATGGATCCTGAGCT...GAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CCACCTGCTAGATTGAATCCAGCTGCCTCCCTTGAAACTCTCTTCCCAATCAAGGTCAGCCCCCGCTGGTaGAGGCTAAGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: PPARLNPAASLETLFPIKVSPRW*RLRKKP
Trigger: GGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGAC...CTTGATTGGGAAGAGAGTTTCAAGGGAGGCAGCTGGATTCAATCTAGCAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCGTCAGCCCCCGCTGGTaGAGGCTAAGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: KVTNQLLRPPGQSRVSCFVSPRW*RLRKKP
Trigger: GGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGAC...GAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTAGCTTTTGCACTCAATaGCACAGCGGGGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTSFCTQ*HSGVDS
Trigger: AGAATCTACCCCGCTGTGGCATTGAGTGCAAAAGCT...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTCCTCTTGGTAGCTTTTaGACTCAATGCCACAGCGGG +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCPLGSF*TQCHSG
Trigger: CCCGCTGTGGCATTGAGTGCAAAAGCTACCAAGAGG...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTCATAGCTCAGGTCCATaGTGTGCTTGGTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTHSSGP*CAWLSQ
Trigger: CTGAGATAACCAAGCACAGCATGGACCTGAGCTATG...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp TGTGTAAGAGCCTGTGTGAAATTCAGCCAGGTTAGCACCAAGGCCTGGCTGATGGGGCTGCTGGGGAACTaGTTGTTGAGCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CVRACVKFSQVSTKAWLMGLLGN*LLSTVS
Trigger: GGAGACTGTGCTCAACAAGCAGTTCCCCAGCAGCCC...CATCAGCCAGGCCTTGGTGCTAACCTGGCTGAATTTCACACAGGCTCTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTCATCCACGGCAATGCTaGAGGCAGAGGAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTHPRQC*RQRKRK
Trigger: TTTTCTTTTCCTCTGCCTGCAGCATTGCCGTGGATG...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCCTAAGCTCCTATGGAACAAGCACCTGGAGAGATTGCTaGCCTGGCAGGTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RPPGQSRVSCFLSSYGTSTWRDC*PGRSQD
Trigger: ATCCTGGGACCTGCCAGGGCAGCAATCTCTCCAGGT...GCTTGTTCCATAGGAGCTTAGGAAACAAGAAACCCTGGATTGCCCAGGGGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTCAGGACCTGGAGAGATTaGTGCCCTGGCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KVTNQLLRPPGQSRVSCFRTWRD*CPGRSQ
Trigger: CTGGGACCTGCCAGGGCAGCAATCTCTCCAGGTCCT...GAAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGGGAACCCACAAATGTaGCTTCAGGATGGGTACAGC +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCGNPQM*LQDGYS
Trigger: GCTGTACCCATCCTGAAGGCACATTTGTGGGTTCCC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CAGGTCATCAGAAACAGTCACGGTGGCTCTGGTGAGGAAGGGGAGGGTCCCACTCAGAGGAAATATGGTTaGCGTGTAGGCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: QVIRNSHGGSGEEGEGPTQRKYG*RVGRCL
Trigger: GAGACATCTGCCTACACGGCAACCATATTTCCTCTG...AGTGGGACCCTCCCCTTCCTCACCAGAGCCACCGTGACTGTTTCTGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTGCAGGCCAAGTCCTCTaGTCCTATTTAGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCAGQVL*SYLARG
Trigger: GCCTCTTGCTAAATAGGAGCAGAGGACTTGGCCTGC...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp AAAAGTCACCAACCAACTTCTCAGACCCCCTGGGCAATCCAGGGTTTCTTGTTTGGGCTCCCAAGGAGCTaGAGGCCAAGTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KSHQPTSQTPWAIQGFLFGLPRS*RPSPLL
Trigger: GAGCAGAGGACTTGGCCTGCAGCTCCTTGGGAGCCC...AAACAAGAAACCCTGGATTGCCCAGGGGGTCTGAGAAGTTGGTTGGTGACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GGTTGCCGTGTAGGCAGATGTCTCCTAGGAGCGTGTGTGTGTAAGAGCCTGTGTTCTAGAGAGGAACCCTaGCACACAGCACGAAGGACT +
Preference number: 4 (lower is better)
Translates to: GCRVGRCLLGACVCKSLCSREEP*HTARRT
Trigger: AGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGA...ACACAGGCTCTTACACACACACGCTCCTAGGAGACATCTGCCTACACGGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp CCAAGTCCTCTGCTCCTATTTAGCAAGAGGCAGGCGGCAATTCGGGCTGATCTCTCTAGAGAGGAACCCTaGCACACAGCACGAAGGACT +
Preference number: 4 (lower is better)
Translates to: PSPLLLFSKRQAAIRADLSREEP*HTARRT
Trigger: AGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGA...GAGATCAGCCCGAATTGCCGCCTGCCTCTTGCTAAATAGGAGCAGAGGACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3
ENST00000679519.1
ENST00000679667.1
ENST00000680247.1
ENST00000680412.1
ENST00000680639.1
ENST00000680811.1
ENST00000680933.1
CDS-3UTR GCA 90 bp GCGGGACTGGGAAGATTTAGGCTGACCAGGTCTTCTTCAGCACTTGGAAGGCACTCTAGAGAGGAACCCTaGCACACAGCACGAAGGACT +
Preference number: 4 (lower is better)
Translates to: AGLGRFRLTRSSSALGRHSREEP*HTARRT
Trigger: AGTCCTTCGTGCTGTGTGGCAGGGTTCCTCTCTAGA...GTGCCTTCCAAGTGCTGAAGAAGACCTGGTCAGCCTAAATCTTCCCAGTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320849.9
ENST00000373932.3