RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AAMP (Homo sapiens)

Ensembl gene IDs: ENSG00000127837

Ensembl transcript IDs: ENST00000248450.9, ENST00000420660.5, ENST00000422731.1, ENST00000444053.5, ENST00000447885.1, ENST00000461911.1, ENST00000465442.1, ENST00000475678.5, ENST00000489767.5, ENST00000494720.5

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATCTTTAACTAGTATCTCTTCCTCCTTTCCACCCCCAGAGACTTaGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATA +
Preference number: 1 (lower is better)
Translates to: KSLTSISSSFPPPET*EGKEREPQTPTPHI
Trigger: TATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTCTCTGGGGGTGGAAAGGAGGAAGAGATACTAGTTAAAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248450.9
ENST00000444053.5
3UTR-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGTGCCCTACTGCCTCTaGTGGCAGACAGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHVPYCL*WQTGAG
Trigger: CCCTGCCCCTGTCTGCCAGCAGAGGCAGTAGGGCAC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCCCTACTGCCTCTGCTaGCAGACAGGGGCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNPYCLC*QTGAGV
Trigger: GACCCCTGCCCCTGTCTGCCAGCAGAGGCAGTAGGG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACAGGTCTGGACAAGGGTaGGAGGGCCCTGGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHRSGQG*EGPGLG
Trigger: ACCCAGCCCAGGGCCCTCCCACCCTTGTCCAGACCT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAGGTCTGGACAAGGGTaGGAGGGCCCTGGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRSGQG*EGPGLG
Trigger: ACCCAGCCCAGGGCCCTCCCACCCTTGTCCAGACCT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAGGGCCCACCAGGTCTaGACAAGGGTGGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKRAHQV*TRVGGP
Trigger: GGGCCCTCCCACCCTTGTCCAGACCTGGTGGGCCCT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGTGCCCTACTGCCTCTaGTGGCAGACAGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTVPYCL*WQTGAG
Trigger: CCCTGCCCCTGTCTGCCAGCAGAGGCAGTAGGGCAC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACCCTACTGCCTCTGCTaGCAGACAGGGGCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKPYCLC*QTGAGV
Trigger: GACCCCTGCCCCTGTCTGCCAGCAGAGGCAGTAGGG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAGGTCTGGACAAGGGTaGGAGGGCCCTGGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKRSGQG*EGPGLG
Trigger: ACCCAGCCCAGGGCCCTCCCACCCTTGTCCAGACCT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAGGGTGGGAGGGCCCTaGGCTGGGTCTCTAAAGAGA +
Preference number: 2 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRVGGP*AGSLKR
Trigger: TCTCTTTAGAGACCCAGCCCAGGGCCCTCCCACCCT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACAGGGTGGGAGGGCCCTaGGCTGGGTCTCTAAAGAGA +
Preference number: 2 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHRVGGP*AGSLKR
Trigger: TCTCTTTAGAGACCCAGCCCAGGGCCCTCCCACCCT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGGGAGGGCCCTGGGCTaGGTCTCTAAAGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHGRALG*VSKEKK
Trigger: TTTCTTCTCTTTAGAGACCCAGCCCAGGGCCCTCCC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGGGGAGCAAGTCAGTTaGAGAGGCTGGAAAGTCATC +
Preference number: 2 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNGEQVS*RGWKVI
Trigger: GATGACTTTCCAGCCTCTTCAACTGACTTGCTCCCC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR TCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGGGGAGCAAGTCAGTTaGAGAGGCTGGAAAGTCATC +
Preference number: 2 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHGEQVS*RGWKVI
Trigger: GATGACTTTCCAGCCTCTTCAACTGACTTGCTCCCC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAGGGAGGGCCCTGGGCTaGGTCTCTAAAGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKGRALG*VSKEKK
Trigger: TTTCTTCTCTTTAGAGACCCAGCCCAGGGCCCTCCC...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGGGAGGGCCCTGGGCTaGGTCTCTAAAGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTGRALG*VSKEKK
Trigger: TTTCTTCTCTTTAGAGACCCAGCCCAGGGCCCTCCC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR TCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAGGGGAGCAAGTCAGTTaGAGAGGCTGGAAAGTCATC +
Preference number: 2 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKGEQVS*RGWKVI
Trigger: GATGACTTTCCAGCCTCTTCAACTGACTTGCTCCCC...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR CCA 72 bp ACTAGTATCTCTTCCTCCTTTCCACCCCCAGAGACTTaGGAAGGGAAAGAACGGGAACCTCAAACACCTACT +
Preference number: 3 (lower is better)
Translates to: TSISSSFPPPET*EGKEREPQTPT
Trigger: AGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTCTCTGGGGGTGGAAAGGAGGAAGAGATACTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAGGGGAGCAAGTCAGTaGAAGAGGCTGGAAAGTCAT +
Preference number: 3 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRGASQ*KRLESH
Trigger: ATGACTTTCCAGCCTCTTCAACTGACTTGCTCCCCT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAAGGGGAGCAAGTCAGTaGAAGAGGCTGGAAAGTCAT +
Preference number: 3 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRGASQ*KRLESH
Trigger: ATGACTTTCCAGCCTCTTCAACTGACTTGCTCCCCT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
3UTR-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAGGGGAGCAAGTCAGTaGAAGAGGCTGGAAAGTCAT +
Preference number: 3 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKRGASQ*KRLESH
Trigger: ATGACTTTCCAGCCTCTTCAACTGACTTGCTCCCCT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCGGGGCCCTCCATGCTaGCGACCACCCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHRGPPC*RPPLPG
Trigger: CCCAGGAAGGGGTGGTCGGCAGCATGGAGGGCCCCG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCGTCGGGGCCCTCCATaGTGCCGACCACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHRRGPP*CRPPLP
Trigger: AGGAAGGGGTGGTCGGCAGCATGGAGGGCCCCGACG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCGTCGGGGCCCTCCATaGTGCCGACCACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRRGPP*CRPPLP
Trigger: AGGAAGGGGTGGTCGGCAGCATGGAGGGCCCCGACG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCTGGGCCAGGTCATCTaGGTCCGGCGGACCGGGATC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNLGQVI*VRRTGI
Trigger: GATCCCGGTCCGCCGGACCCAGATGACCTGGCCCAG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248450.9
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAGGGCCCACCAGGTCTaGACAAGGGTGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRAHQV*TRVGGP
Trigger: GGGCCCTCCCACCCTTGTCCAGACCTGGTGGGCCCT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACAGGGCCCACCAGGTCTaGACAAGGGTGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHRAHQV*TRVGGP
Trigger: GGGCCCTCCCACCCTTGTCCAGACCTGGTGGGCCCT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTGCCGGTGGTGGCACTaGCCAGCTTGGCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNCRWWH*PAWPGS
Trigger: ACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCCGATTCGGACTCCATaGGGCGCAAGCGGCGGATCC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNPIRTP*GASGGS
Trigger: GGATCCGCCGCTTGCGCCGCATGGAGTCCGAATCGG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248450.9
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCCCCTTCTCCCAGGCTaGGCTGGGAGGCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNPLLPG*AGRPQS
Trigger: AGACTGTGGCCTCCCAGCCCAGCCTGGGAGAAGGGG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCCCTACTGCCTCTGCTaGCAGACAGGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHPYCLC*QTGAGV
Trigger: GACCCCTGCCCCTGTCTGCCAGCAGAGGCAGTAGGG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAAGGGCCCACCAGGTCTaGACAAGGGTGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRAHQV*TRVGGP
Trigger: GGGCCCTCCCACCCTTGTCCAGACCTGGTGGGCCCT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGGCCAGGTCATCTGCTaGGTCCGGCGGACCGGGATC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTGQVIC*VRRTGI
Trigger: GATCCCGGTCCGCCGGACCCAGCAGATGACCTGGCC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444053.5
CDS-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGCAGCTCCCCATCGCTaGGCCGCCATACGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNAAPHR*AAIRRL
Trigger: AAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGCAGCTCCCCATCGCTaGGCCGCCATACGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHAAPHR*AAIRRL
Trigger: AAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACTGGCAGCAACACAGGTaGGTGGGCCCTGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHWQQHR*VGPGDP
Trigger: AGGGTCACCAGGGCCCACTCACCTGTGTTGCTGCCA...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTGGCAGCAACACAGGTaGGTGGGCCCTGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNWQQHR*VGPGDP
Trigger: AGGGTCACCAGGGCCCACTCACCTGTGTTGCTGCCA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATGCCGGTGGTGGCACTaGCCAGCTTGGCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKCRWWH*PAWPGS
Trigger: ACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGCCTCCCACAGCAGCTaGACGATGCCCGACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTASHSS*TMPDWC
Trigger: GCACCAGTCGGGCATCGTGCAGCTGCTGTGGGAGGC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTACCACGGCAGTGCCTaGCTCCCACAGCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNYHGSA*LPQQLH
Trigger: GTGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACTCGGCCACAGGTGGCTaGGCAGTTGGGACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHSATGG*AVGTLE
Trigger: TTCCAGGGTCCCAACTGCCCAGCCACCTGTGGCCGA...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACCCCTTCTCCCAGGCTaGGCTGGGAGGCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTPLLPG*AGRPQS
Trigger: AGACTGTGGCCTCCCAGCCCAGCCTGGGAGAAGGGG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACCCCTTCTCCCAGGCTaGGCTGGGAGGCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKPLLPG*AGRPQS
Trigger: AGACTGTGGCCTCCCAGCCCAGCCTGGGAGAAGGGG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACCCTACTGCCTCTGCTaGCAGACAGGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTPYCLC*QTGAGV
Trigger: GACCCCTGCCCCTGTCTGCCAGCAGAGGCAGTAGGG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAAGGTCTGGACAAGGGTaGGAGGGCCCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRSGQG*EGPGLG
Trigger: ACCCAGCCCAGGGCCCTCCCACCCTTGTCCAGACCT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAGCAGCTCCCCATCGCTaGGCCGCCATACGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKAAPHR*AAIRRL
Trigger: AAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGC...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATGGCAGCAACACAGGTaGGTGGGCCCTGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTWQQHR*VGPGDP
Trigger: AGGGTCACCAGGGCCCACTCACCTGTGTTGCTGCCA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCGCTTTGTGGTCTCCTaGCGTGGTCACCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRFVVS*RGHHQG
Trigger: TCCCTGGTGGTGACCACGTCAGGAGACCACAAAGCG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCGCTTTGTGGTCTCCTaGCGTGGTCACCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHRFVVS*RGHHQG
Trigger: TCCCTGGTGGTGACCACGTCAGGAGACCACAAAGCG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACACAGGTGCCCGAGGATaGCACTCCATCCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHTGARG*HSIHSR
Trigger: CCTGGAGTGGATGGAGTGGCATCCTCGGGCACCTGT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATACCACGGCAGTGCCTaGCTCCCACAGCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKYHGSA*LPQQLH
Trigger: GTGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATCCCAGAGTCAGCTCTaGGCGACGACGCGGAACTCG +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTSQSQL*ATTRNS
Trigger: CGAGTTCCGCGTCGTCGCGCAGAGCTGACTCTGGGA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGCGGATCCACTTCTCTaGGCCCAAACGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNADPLL*AQTPPR
Trigger: TCTGGGAGGCGTTTGGGCCCAGAGAAGTGGATCCGC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248450.9
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACCGACCACCCCTTCCTaGGGTTCTAGAACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKPTTPS*GSRTQP
Trigger: GGGCTGGGTTCTAGAACCCCAGGAAGGGGTGGTCGG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAGGTGGCTGGGCAGTTaGGACCCTGGAAGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRWLGS*DPGRSC
Trigger: GCAAGACCTTCCAGGGTCCCAACTGCCCAGCCACCT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATCGGCCACAGGTGGCTaGGCAGTTGGGACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKSATGG*AVGTLE
Trigger: TTCCAGGGTCCCAACTGCCCAGCCACCTGTGGCCGA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAGTGCAATGCAAAGGTaGCCTCGCTATCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNSAMQR*PRYRRG
Trigger: GCCCCGACGATAGCGAGGTCACCTTTGCATTGCACT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACAGTGCAATGCAAAGGTaGCCTCGCTATCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHSAMQR*PRYRRG
Trigger: GCCCCGACGATAGCGAGGTCACCTTTGCATTGCACT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACGCTTTGTGGTCTCCTaGCGTGGTCACCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKRFVVS*RGHHQG
Trigger: TCCCTGGTGGTGACCACGTCAGGAGACCACAAAGCG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAACAGGTGCCCGAGGATaGCACTCCATCCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKTGARG*HSIHSR
Trigger: CCTGGAGTGGATGGAGTGGCATCCTCGGGCACCTGT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAACAGGTGCCCGAGGATaGCACTCCATCCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTTGARG*HSIHSR
Trigger: CCTGGAGTGGATGGAGTGGCATCCTCGGGCACCTGT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACGCCAACAGGACAGGTaGCCGAGGATGCCACTCCAT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKRQQDR*PRMPLH
Trigger: ATGGAGTGGCATCCTCGGGCACCTGTCCTGTTGGCG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACGCCAACAGGACAGGTaGCCGAGGATGCCACTCCAT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRQQDR*PRMPLH
Trigger: ATGGAGTGGCATCCTCGGGCACCTGTCCTGTTGGCG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCCAGGGGCATCACACTaGAGAAGCCCAAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNPGASH*RSPRTP
Trigger: TGGAGTCCTTGGGCTTCTGCAGTGTGATGCCCCTGG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCAGGTAGCCAACAGCTaGCAGGGGCATCACACTGCA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHQVANS*QGHHTA
Trigger: TGCAGTGTGATGCCCCTGGCAGCTGTTGGCTACCTG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACCCAGAGGCGCACGATaGCATCCAGGCTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTPRGAR*HPGCRY
Trigger: ATACCTGCAGCCTGGATGGCATCGTGCGCCTCTGGG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACCCAGAGGCGCACGATaGCATCCAGGCTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKPRGAR*HPGCRY
Trigger: ATACCTGCAGCCTGGATGGCATCGTGCGCCTCTGGG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGCGGATCCACTTCTCTaGGCCCAAACGCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTADPLL*AQTPPR
Trigger: TCTGGGAGGCGTTTGGGCCCAGAGAAGTGGATCCGC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248450.9
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAGGTGGCTGGGCAGTTaGGACCCTGGAAGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKRWLGS*DPGRSC
Trigger: GCAAGACCTTCCAGGGTCCCAACTGCCCAGCCACCT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCTGACCAGCTTGGCCTaGCAGTCCACAGAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNLTSLA*QSTEPV
Trigger: AACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACTGTGGTCTCCTGACGTaGTCACCACCAGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHCGLLT*SPPGRH
Trigger: ATGCCTCCCTGGTGGTGACCACGTCAGGAGACCACA...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAAGGGTGGGAGGGCCCTaGGCTGGGTCTCTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRVGGP*AGSLKR
Trigger: TCTCTTTAGAGACCCAGCCCAGGGCCCTCCCACCCT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGAGAGGGTTAGAAGATaGGGCTCGGGAGGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNERVRR*GSGGGK
Trigger: CTTACCGCCTCCCGAGCCCCATCTTCTAACCCTCTC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420660.5
CDS-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGGGAGGCATCTTTGCTaGGGGCAAAGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNGRHLC*GQSPGS
Trigger: AGATCCTGGACTTTGCCCTCAGCAAAGATGCCTCCC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGGGAGGCATCTTTGCTaGGGGCAAAGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHGRHLC*GQSPGS
Trigger: AGATCCTGGACTTTGCCCTCAGCAAAGATGCCTCCC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACTTCACCCCCGGTCACTaGCAAGGTATTGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHFTPGH*QGIGLG
Trigger: CCCAAGACCAATACCTTGGCAGTGACCGGGGGTGAA...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACCAGGGGCATCACACTaGAGAAGCCCAAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKPGASH*RSPRTP
Trigger: TGGAGTCCTTGGGCTTCTGCAGTGTGATGCCCCTGG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACCAGGGGCATCACACTaGAGAAGCCCAAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTPGASH*RSPRTP
Trigger: TGGAGTCCTTGGGCTTCTGCAGTGTGATGCCCCTGG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACAGGTAGCCAACAGCTaGCAGGGGCATCACACTGCA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKQVANS*QGHHTA
Trigger: TGCAGTGTGATGCCCCTGGCAGCTGTTGGCTACCTG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAACAGCAGCTGCACGATaGCCGACTGGTGCTGACACT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKTAAAR*PTGADT
Trigger: AGTGTCAGCACCAGTCGGGCATCGTGCAGCTGCTGT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAACAGCAGCTGCACGATaGCCGACTGGTGCTGACACT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTTAAAR*PTGADT
Trigger: AGTGTCAGCACCAGTCGGGCATCGTGCAGCTGCTGT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTATATACCACGGCAGTaGCTGCCTCCCACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNYIPRQ*LPPTAA
Trigger: AGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCGATGCCATCCAGGCTaGAGGTATATACCACGGCAG +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHRCHPG*RYIPRQ
Trigger: CTGCCGTGGTATATACCTGCAGCCTGGATGGCATCG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCGATGCCATCCAGGCTaGAGGTATATACCACGGCAG +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRCHPG*RYIPRQ
Trigger: CTGCCGTGGTATATACCTGCAGCCTGGATGGCATCG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCTGGGCCAGGTCATCTaGTTTGGGGAGAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHLGQVI*FGERVR
Trigger: TCTAACCCTCTCCCCAAAGCAGATGACCTGGCCCAG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420660.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACTGACCAGCTTGGCCTaGCAGTCCACAGAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTLTSLA*QSTEPV
Trigger: AACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATGTGGTCTCCTGACGTaGTCACCACCAGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTCGLLT*SPPGRH
Trigger: ATGCCTCCCTGGTGGTGACCACGTCAGGAGACCACA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATGTGGTCTCCTGACGTaGTCACCACCAGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKCGLLT*SPPGRH
Trigger: ATGCCTCCCTGGTGGTGACCACGTCAGGAGACCACA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGGGAGGGCCCTGGGCTaGGTCTCTAAAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNGRALG*VSKEKK
Trigger: TTTCTTCTCTTTAGAGACCCAGCCCAGGGCCCTCCC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCCACCCCCAGAGACTTaGGAAGGGAAAGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNPPPET*EGKERE
Trigger: TTCCCGTTCTTTCCCTTCCCAAGTCTCTGGGGGTGG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCCACCCCCAGAGACTTaGGAAGGGAAAGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHPPPET*EGKERE
Trigger: TTCCCGTTCTTTCCCTTCCCAAGTCTCTGGGGGTGG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAGGGAGGCATCTTTGCTaGGGGCAAAGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKGRHLC*GQSPGS
Trigger: AGATCCTGGACTTTGCCCTCAGCAAAGATGCCTCCC...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATTCACCCCCGGTCACTaGCAAGGTATTGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKFTPGH*QGIGLG
Trigger: CCCAAGACCAATACCTTGGCAGTGACCGGGGGTGAA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGACCCTGGAAGGTCTTaGAGTCACCATTCGGGACTT +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHDPGRS*SHHSGL
Trigger: AAGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGACCCTGGAAGGTCTTaGAGTCACCATTCGGGACTT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNDPGRS*SHHSGL
Trigger: AAGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTGGATAGGGCTTCCCTaGTTCAGGTCCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNWIGLP*FRSQIL
Trigger: CAGGATTTGGGACCTGAAGCAGGGAAGCCCTATCCA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATATATACCACGGCAGTaGCTGCCTCCCACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTYIPRQ*LPPTAA
Trigger: AGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATATATACCACGGCAGTaGCTGCCTCCCACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKYIPRQ*LPPTAA
Trigger: AGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACGATGCCATCCAGGCTaGAGGTATATACCACGGCAG +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRCHPG*RYIPRQ
Trigger: CTGCCGTGGTATATACCTGCAGCCTGGATGGCATCG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTCACTGCCAAGGTATTaGTCTTGGGGTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNSLPRY*SWGPGS
Trigger: TGAGCCTGGACCCCAAGACCAATACCTTGGCAGTGA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCACTCATGTCCCCTGTaGCCACTAGAGTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHHSCPL*PLEWSH
Trigger: ATGACTCCACTCTAGTGGCCACAGGGGACATGAGTG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCACTCATGTCCCCTGTaGCCACTAGAGTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNHSCPL*PLEWSH
Trigger: ATGACTCCACTCTAGTGGCCACAGGGGACATGAGTG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATATCAAGCTGCCATCCTaGTTGGCAGCAACACAGGTG +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNIKLPS*LAATQV
Trigger: CACCTGTGTTGCTGCCAACCAGGATGGCAGCTTGAT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACTCAGGTCCCAAATCCTaGTGGTCCCATCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHSGPKS*WSHLHS
Trigger: GCTATGAAGATGGGACCATCAGGATTTGGGACCTGA...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGGGGAGCAAGTCAGTTaGAGAGGCTGGAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTGEQVS*RGWKVI
Trigger: GATGACTTTCCAGCCTCTTCAACTGACTTGCTCCCC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTCCTTAGTGTCCACCTaGCACACTTTCAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNSLVST*HTFKRP
Trigger: TGGCCTCTTGAAAGTGTGGCAGGTGGACACTAAGGA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGACCCTGGAAGGTCTTaGAGTCACCATTCGGGACTT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTDPGRS*SHHSGL
Trigger: AAGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATGGATAGGGCTTCCCTaGTTCAGGTCCCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTWIGLP*FRSQIL
Trigger: CAGGATTTGGGACCTGAAGCAGGGAAGCCCTATCCA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCAGTTAGGATCAAGCTaGCATCCTGGTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHQLGSS*HPGWQQ
Trigger: TTGCTGCCAACCAGGATGGCAGCTTGATCCTAACTG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCCAAGGTATTGGTCTTaGGGTCCAGGCTCACACAAA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHPRYWS*GPGSHK
Trigger: TTTGTGTGAGCCTGGACCCCAAGACCAATACCTTGG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCCAAGGTATTGGTCTTaGGGTCCAGGCTCACACAAA +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNPRYWS*GPGSHK
Trigger: TTTGTGTGAGCCTGGACCCCAAGACCAATACCTTGG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATCACTGCCAAGGTATTaGTCTTGGGGTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKSLPRY*SWGPGS
Trigger: TGAGCCTGGACCCCAAGACCAATACCTTGGCAGTGA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGTCCCTTTCAGTACATaGATAGGGCTTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHVPFST*IGLPCF
Trigger: GAAGCAGGGAAGCCCTATCCATGTACTGAAAGGGAC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGTCCCTTTCAGTACATaGATAGGGCTTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNVPFST*IGLPCF
Trigger: GAAGCAGGGAAGCCCTATCCATGTACTGAAAGGGAC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACACATCTTCCATCTCCTaGGCCAGGTCATCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHTSSIS*ARSSAL
Trigger: CAAAGCAGATGACCTGGCCCAGGAGATGGAAGATGT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420660.5
CDS-3UTR TCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATCAGGTCCCAAATCCTaGTGGTCCCATCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKSGPKS*WSHLHS
Trigger: GCTATGAAGATGGGACCATCAGGATTTGGGACCTGA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAACACAGATGCTGAGTaGAATGCAAAGGTGACCTCG +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNNTDAE*NAKVTS
Trigger: CGAGGTCACCTTTGCATTGCACTCAGCATCTGTGTT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATCCTTAGTGTCCACCTaGCACACTTTCAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTSLVST*HTFKRP
Trigger: TGGCCTCTTGAAAGTGTGGCAGGTGGACACTAAGGA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATCCTTAGTGTCCACCTaGCACACTTTCAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKSLVST*HTFKRP
Trigger: TGGCCTCTTGAAAGTGTGGCAGGTGGACACTAAGGA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACAGTTAGGATCAAGCTaGCATCCTGGTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTQLGSS*HPGWQQ
Trigger: TTGCTGCCAACCAGGATGGCAGCTTGATCCTAACTG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACCAAGGTATTGGTCTTaGGGTCCAGGCTCACACAAA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKPRYWS*GPGSHK
Trigger: TTTGTGTGAGCCTGGACCCCAAGACCAATACCTTGG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGTCACAGAGTCTTTATaGCCTGCACACTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHVTESL*PAHSKS
Trigger: GCTCTTTGAGTGTGCAGGCCATAAAGACTCTGTGAC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACACTAGAGTGGAGTCATaGCTGAAACCAGCACAAGTC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHTRVES*LKPAQV
Trigger: GACTTGTGCTGGTTTCAGCCATGACTCCACTCTAGT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACAATACTTTCGCTTTGTaGTCTCCTGACGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHNTFAL*SPDVVT
Trigger: GGTGACCACGTCAGGAGACCACAAAGCGAAAGTATT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAAAACACAGATGCTaGGTGCAATGCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNTKHRC*VQCKGD
Trigger: GTCACCTTTGCATTGCACTCAGCATCTGTGTTTTGT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAAGAGTCTTTATGGCCTaGACACTCAAAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRVFMA*TLKEQL
Trigger: GAGCTGCTCTTTGAGTGTGCAGGCCATAAAGACTCT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR GCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAGAGTCTTTATGGCCTaGACACTCAAAGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKRVFMA*TLKEQL
Trigger: GAGCTGCTCTTTGAGTGTGCAGGCCATAAAGACTCT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGTCACAGAGTCTTTATaGCCTGCACACTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTVTESL*PAHSKS
Trigger: GCTCTTTGAGTGTGCAGGCCATAAAGACTCTGTGAC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAACTAGAGTGGAGTCATaGCTGAAACCAGCACAAGTC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTTRVES*LKPAQV
Trigger: GACTTGTGCTGGTTTCAGCCATGACTCCACTCTAGT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAATACTTTCGCTTTGTaGTCTCCTGACGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKNTFAL*SPDVVT
Trigger: GGTGACCACGTCAGGAGACCACAAAGCGAAAGTATT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACCAAATACACACCCCATaGCTCACACCAGCAAATGAA +
Preference number: 4 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHQIHTP*LTPANE
Trigger: TTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTG...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAACAAAACACAGATGCTaGGTGCAATGCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKTKHRC*VQCKGD
Trigger: GTCACCTTTGCATTGCACTCAGCATCTGTGTTTTGT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR TCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAACAAAACACAGATGCTaGGTGCAATGCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTTKHRC*VQCKGD
Trigger: GTCACCTTTGCATTGCACTCAGCATCTGTGTTTTGT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAATCTCTTCATCACCATaGAAGCTTAGGGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTISSSP*KLRVSS
Trigger: ACTGGAGACCCTAAGCTTCCATGGTGATGAAGAGAT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248450.9
ENST00000444053.5
CDS-3UTR CCA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACAAATACACACCCCATaGCTCACACCAGCAAATGAA +
Preference number: 4 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTQIHTP*LTPANE
Trigger: TTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CCA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACAAATACACACCCCATaGCTCACACCAGCAAATGAA +
Preference number: 4 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKQIHTP*LTPANE
Trigger: TTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS GCA 90 bp GGCGGCCGGTCCGGGCGTCCCAGAGGCGCACGATGCCATCCAGGCTaGAGGTATATACCACGGCAGTGCCTGCCTCCCACAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GGRSGRPRGARCHPG*RYIPRQCLPPTAAA
Trigger: TGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATACCTGCAGCCTGGATGGCATCGTGCGCCTCTGGGACGCCCGGACCGGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS TCA 90 bp GCCCCAGCCGGGCTCCAGGTCCACTCACCTTGCCGGTGGTGGCACTaGCCAGCTTGGCCTGGCAGTCCACAGAGCCAGTTAGGATCAAGC +
Preference number: 5 (lower is better)
Translates to: APAGLQVHSPCRWWH*PAWPGSPQSQLGSS
Trigger: GCTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGAGTGGACCTGGAGCCCGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CCA 90 bp TTCCGATTCGGACTCCATGCGGCGCAAGCGGCGGATCCACTTCTCTaGGCCCAAACGCCTCCCAGAGTCAGCTCTGCGCGACGACGCGGA +
Preference number: 5 (lower is better)
Translates to: FRFGLHAAQAADPLL*AQTPPRVSSARRRG
Trigger: TCCGCGTCGTCGCGCAGAGCTGACTCTGGGAGGCGTTTGGGCCCAGAGAAGTGGATCCGCCGCTTGCGCCGCATGGAGTCCGAATCGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444053.5
CDS TCA 90 bp GTAGCCAACAGCTGCCAGGGGCATCCTGGCCAGAGGAGCGTACCATaGAGACTCATGAGGGCCTGGACTCACACGCCCTGCCGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VANSCQGHPGQRSVP*RLMRAWTHTPCRPP
Trigger: GGGAGGACGGCAGGGCGTGTGAGTCCAGGCCCTCATGAGTCTTCATGGTACGCTCCTCTGGCCAGGATGCCCCTGGCAGCTGTTGGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465442.1
ENST00000494720.5
CDS GCA 90 bp CCACATCCAGGTGTTGCCGTCAGCTGTGCCCGCCAACAGGACAGGTaGCCGAGGATGCCACTCCATCCACTGGACAGGGAGGAAGGGGCA +
Preference number: 5 (lower is better)
Translates to: PHPGVAVSCARQQDR*PRMPLHPLDREEGA
Trigger: TGCCCCTTCCTCCCTGTCCAGTGGATGGAGTGGCATCCTCGGGCACCTGTCCTGTTGGCGGGCACAGCTGACGGCAACACCTGGATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465442.1
CDS GCA 90 bp GCGCACGATGCCATCCAGGCTGCAGGTATATACCACGGCAGTGCCTaGCTCCCACAGCAGCTGCACGATGCCCGACTGGTGCTGACACTG +
Preference number: 5 (lower is better)
Translates to: AHDAIQAAGIYHGSA*LPQQLHDARLVLTL
Trigger: CAGTGTCAGCACCAGTCGGGCATCGTGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATACCTGCAGCCTGGATGGCATCGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS GCA 90 bp AGAGGCGCACGATGCCATCCAGGCTGCAGGTATATACCACGGCAGTaGCTGCCTCCCACAGCAGCTGCACGATGCCCGACTGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: RGARCHPGCRYIPRQ*LPPTAAARCPTGAD
Trigger: GTCAGCACCAGTCGGGCATCGTGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATACCTGCAGCCTGGATGGCATCGTGCGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CCA 90 bp AAGGGAGGTGCTCTCACCATCAGGGAGGACTCGGCCACAGGTGGCTaGGCAGTTGGGACCCTGGAAGGTCTTGCAGTCACCATTCGGGAC +
Preference number: 5 (lower is better)
Translates to: KGGALTIREDSATGG*AVGTLEGLAVTIRD
Trigger: GTCCCGAATGGTGACTGCAAGACCTTCCAGGGTCCCAACTGCCCAGCCACCTGTGGCCGAGTCCTCCCTGATGGTGAGAGCACCTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS TCA 90 bp AAGCTGCCATCCTGGTTGGCAGCAACACAGGTGAGTGGGCCCTGGTaGCCCTCAGTCCCTAGCATAGAGCAGGGAGGCAGCTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: KLPSWLAATQVSGPW*PSVPSIEQGGSSGF
Trigger: GAAGCCTGAGCTGCCTCCCTGCTCTATGCTAGGGACTGAGGGTCACCAGGGCCCACTCACCTGTGTTGCTGCCAACCAGGATGGCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS GCA 90 bp GGAAGGTCTTGCAGTCACCATTCGGGACTTTCCACATCCAGGTGTTaGCGTCAGCTGTGCCCGCCAACAGGACAGGTGCCCGAGGATGCC +
Preference number: 5 (lower is better)
Translates to: GRSCSHHSGLSTSRC*RQLCPPTGQVPEDA
Trigger: GGCATCCTCGGGCACCTGTCCTGTTGGCGGGCACAGCTGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCAAGACCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS GCA 90 bp GGACTCGGCCACAGGTGGCTGGGCAGTTGGGACCCTGGAAGGTCTTaGAGTCACCATTCGGGACTTTCCACATCCAGGTGTTGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: GLGHRWLGSWDPGRS*SHHSGLSTSRCCRQ
Trigger: CTGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTCCCAACTGCCCAGCCACCTGTGGCCGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS GCA 90 bp CAGAGCTGGCTTGGCGCAATAAAGGCAGAACTGGCCTCCCAAGCTTaGACCCCCAACAACCCAAGGCCCCACAGAGCTGACTCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: QSWLGAIKAELASQA*TPNNPRPHRADSRS
Trigger: AGAGCGGGAGTCAGCTCTGTGGGGCCTTGGGTTGTTGGGGGTGCAAGCTTGGGAGGCCAGTTCTGCCTTTATTGCGCCAAGCCAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465442.1
CDS GCA 90 bp GCAGGAAGGAGGCGCTGTGAACTTTGGGGCCCAGGAGGTCAGCACTaGAAACAGCAGGCCTCAGATTTTGCCGGCTGTGACCCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: AGRRRCELWGPGGQH*KQQASDFAGCDPEG
Trigger: GCCTTCTGGGTCACAGCCGGCAAAATCTGAGGCCTGCTGTTTGCAGTGCTGACCTCCTGGGCCCCAAAGTTCACAGCGCCTCCTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS CCA 90 bp TACCACAGCTCTCTTCCCATCAGGGAGGACTCGGCCACAGGTGGCTaGGCAGTTGGGACCCTGGAAGGTCTTGCAGTCACCATTCGGGAC +
Preference number: 5 (lower is better)
Translates to: YHSSLPIREDSATGG*AVGTLEGLAVTIRD
Trigger: GTCCCGAATGGTGACTGCAAGACCTTCCAGGGTCCCAACTGCCCAGCCACCTGTGGCCGAGTCCTCCCTGATGGGAAGAGAGCTGTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000489767.5
CDS CCA 90 bp CCAGGTCCACTCACCTTGCCGGTGGTGGCACTGACCAGCTTGGCCTaGCAGTCCACAGAGCCAGTTAGGATCAAGCTGCCATCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PGPLTLPVVALTSLA*QSTEPVRIKLPSWL
Trigger: CAACCAGGATGGCAGCTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGAGTGGACCTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CCA 90 bp TGGCCAAGGTCCCATCCAGGTAGCCAACAGCTGCCAGGGGCATCCTaGCCAGAGGAGCGTACCATGAAGACTCATGAGGGCCTGGACTCA +
Preference number: 5 (lower is better)
Translates to: WPRSHPGSQQLPGAS*PEERTMKTHEGLDS
Trigger: TGAGTCCAGGCCCTCATGAGTCTTCATGGTACGCTCCTCTGGCCAGGATGCCCCTGGCAGCTGTTGGCTACCTGGATGGGACCTTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465442.1
ENST00000494720.5
CDS GCA 90 bp AGTCACCATTCGGGACTTTCCACATCCAGGTGTTGCCGTCAGCTGTaGCCGCCAACAGGACAGGTGCCCGAGGATGCCACTCCATCCACT +
Preference number: 5 (lower is better)
Translates to: SHHSGLSTSRCCRQL*PPTGQVPEDATPST
Trigger: AGTGGATGGAGTGGCATCCTCGGGCACCTGTCCTGTTGGCGGGCACAGCTGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS GCA 90 bp TGCAAACAGCAGGCCTCAGATTTTGCCGGCTGTGACCCAGAAGGCTaGTCTGGGAGGTGTATATCCCGGGATTCGGCCTCTGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: CKQQASDFAGCDPEG*SGRCISRDSASAPR
Trigger: CCTGGGTGCAGAGGCCGAATCCCGGGATATACACCTCCCAGAGCAGCCTTCTGGGTCACAGCCGGCAAAATCTGAGGCCTGCTGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS TCA 90 bp AGGAGGTCAGCACTGCAAACAGCAGGCCTCAGATTTTGCCGGCTGTaGCCCAGAAGGCTGCTCTGGGAGGTGTATATCCCGGGATTCGGC +
Preference number: 5 (lower is better)
Translates to: RRSALQTAGLRFCRL*PRRLLWEVYIPGFG
Trigger: GCCGAATCCCGGGATATACACCTCCCAGAGCAGCCTTCTGGGTCACAGCCGGCAAAATCTGAGGCCTGCTGTTTGCAGTGCTGACCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS CCA 90 bp AAAACACCCACCACCTTGCCGGTGGTGGCACTGACCAGCTTGGCCTaGCAGTCCACAGAGCCAGTTAGGATCAAGCTGCCATCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KTPTTLPVVALTSLA*QSTEPVRIKLPSWL
Trigger: CAACCAGGATGGCAGCTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGGTGGGTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
CDS TCA 90 bp CAGAGTCTTTATGGCCTGCACACTCAAAGAGCAGCTCCCCATCGCTaGGCCGCCATACGAAGGCTTTGTCATCTTCACCCCCGGTCACTG +
Preference number: 5 (lower is better)
Translates to: QSLYGLHTQRAAPHR*AAIRRLCHLHPRSL
Trigger: CAGTGACCGGGGGTGAAGATGACAAAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGCTCTTTGAGTGTGCAGGCCATAAAGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000475678.5
ENST00000489767.5
CDS GCA 90 bp TTCTTCCTCAAAGTCCACATCTTCCATCTCCTGGGCCAGGTCATCTaGTTTGGGGAGAGGGTTAGAAGATGGGGCTCGGGAGGCGGTAAG +
Preference number: 5 (lower is better)
Translates to: FFLKVHIFHLLGQVI*FGERVRRWGSGGGK
Trigger: CTTACCGCCTCCCGAGCCCCATCTTCTAACCCTCTCCCCAAAGCAGATGACCTGGCCCAGGAGATGGAAGATGTGGACTTTGAGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420660.5
CDS CCA 90 bp AGGCCCAGGCTAACACTTCCCCCACCTCTGATACCTTTCAGTACATaGATAGGGCTTCCCTGCTTCAGGTCCCAAATCCTGATGGTCCCA +
Preference number: 5 (lower is better)
Translates to: RPRLTLPPPLIPFST*IGLPCFRSQILMVP
Trigger: TGGGACCATCAGGATTTGGGACCTGAAGCAGGGAAGCCCTATCCATGTACTGAAAGGTATCAGAGGTGGGGGAAGTGTTAGCCTGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTTCCACATCCAGGTGTaGCCGTCAGCTGTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNFHIQV*PSAVPA
Trigger: GGCGGGCACAGCTGACGGCAACACCTGGATGTGGAA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS TCA 90 bp AGAGGCCACTCATGTCCCCTGTGGCCACTAGAGTGGAGTCATGGCTaGAACCAGCACAAGTCACAGAGTCTTTATGGCCTGCACACTCAA +
Preference number: 5 (lower is better)
Translates to: RGHSCPLWPLEWSHG*NQHKSQSLYGLHTQ
Trigger: TTGAGTGTGCAGGCCATAAAGACTCTGTGACTTGTGCTGGTTTCAGCCATGACTCCACTCTAGTGGCCACAGGGGACATGAGTGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000475678.5
ENST00000489767.5
CDS TCA 90 bp ACGGTCAGGCCTTTGGACACAAAATACTTTCGCTTTGTGGTCTCCTaGCGTGGTCACCACCAGGGAGGCATCTTTGCTGAGGGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: TVRPLDTKYFRFVVS*RGHHQGGIFAEGKV
Trigger: GACTTTGCCCTCAGCAAAGATGCCTCCCTGGTGGTGACCACGTCAGGAGACCACAAAGCGAAAGTATTTTGTGTCCAAAGGCCTGACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CCA 90 bp TTCAAGAGGCCACTCATGTCCCCTGTGGCCACTAGAGTGGAGTCATaGCTGAAACCAGCACAAGTCACAGAGTCTTTATGGCCTGCACAC +
Preference number: 5 (lower is better)
Translates to: FKRPLMSPVATRVES*LKPAQVTESLWPAH
Trigger: GTGTGCAGGCCATAAAGACTCTGTGACTTGTGCTGGTTTCAGCCATGACTCCACTCTAGTGGCCACAGGGGACATGAGTGGCCTCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000475678.5
ENST00000489767.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATTCCACATCCAGGTGTaGCCGTCAGCTGTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTFHIQV*PSAVPA
Trigger: GGCGGGCACAGCTGACGGCAACACCTGGATGTGGAA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATTCCACATCCAGGTGTaGCCGTCAGCTGTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKFHIQV*PSAVPA
Trigger: GGCGGGCACAGCTGACGGCAACACCTGGATGTGGAA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGTGGCACTGACCAGCTaGGCCTGGCAGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTVALTS*AWQSTE
Trigger: CTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCAC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAGTGGCACTGACCAGCTaGGCCTGGCAGTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKVALTS*AWQSTE
Trigger: CTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCAC...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAAAACACCCACCACCTaGCCGGTGGTGGCACTGACC +
Preference number: 5 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNKTPTT*PVVALT
Trigger: GGTCAGTGCCACCACCGGCAAGGTGGTGGGTGTTTT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCGCCATACGAAGGCTTaGTCATCTTCACCCCCGGTC +
Preference number: 5 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNRHTKA*SSSPPV
Trigger: GACCGGGGGTGAAGATGACAAAGCCTTCGTATGGCG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGGACCCTGGAAGGTCTaGCAGTCACCATTCGGGACT +
Preference number: 5 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHGPWKV*QSPFGT
Trigger: AGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTCC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAAAAACACCCACCACCTaGCCGGTGGTGGCACTGACC +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTKTPTT*PVVALT
Trigger: GGTCAGTGCCACCACCGGCAAGGTGGTGGGTGTTTT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAAAACACCCACCACCTaGCCGGTGGTGGCACTGACC +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKKTPTT*PVVALT
Trigger: GGTCAGTGCCACCACCGGCAAGGTGGTGGGTGTTTT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATAAGGACTCCACCGAGTaGGACTCACTCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNKDSTE*DSLSSP
Trigger: AGGGGAGGAGAGTGAGTCCAACTCGGTGGAGTCCTT...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACAAGGACTCCACCGAGTaGGACTCACTCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHKDSTE*DSLSSP
Trigger: AGGGGAGGAGAGTGAGTCCAACTCGGTGGAGTCCTT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACACCAGGGAGGCATCTTaGCTGAGGGCAAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHTREAS*LRAKSR
Trigger: CCTGGACTTTGCCCTCAGCAAAGATGCCTCCCTGGT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACTCCACCCCCAGAGACTaGGGAAGGGAAAGAACGGGA +
Preference number: 5 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHSTPRD*GRERTG
Trigger: TCCCGTTCTTTCCCTTCCCAAGTCTCTGGGGGTGGA...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACGCCAAGGTATTGGTCTaGGGGTCCAGGCTCACACAA +
Preference number: 5 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHAKVLV*GSRLTQ
Trigger: TTGTGTGAGCCTGGACCCCAAGACCAATACCTTGGC...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATGCCAAGGTATTGGTCTaGGGGTCCAGGCTCACACAA +
Preference number: 5 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNAKVLV*GSRLTQ
Trigger: TTGTGTGAGCCTGGACCCCAAGACCAATACCTTGGC...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAGTCACTGCCAAGGTATaGGTCTTGGGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKVTAKV*VLGSRL
Trigger: GAGCCTGGACCCCAAGACCAATACCTTGGCAGTGAC...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGTCACTGCCAAGGTATaGGTCTTGGGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTVTAKV*VLGSRL
Trigger: GAGCCTGGACCCCAAGACCAATACCTTGGCAGTGAC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACGCCATACGAAGGCTTaGTCATCTTCACCCCCGGTC +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTRHTKA*SSSPPV
Trigger: GACCGGGGGTGAAGATGACAAAGCCTTCGTATGGCG...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGGACCCTGGAAGGTCTaGCAGTCACCATTCGGGACT +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTGPWKV*QSPFGT
Trigger: AGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTCC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACAAGCTGCCATCCTGGTaGGCAGCAACACAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHKLPSW*AATQVS
Trigger: ACTCACCTGTGTTGCTGCCAACCAGGATGGCAGCTT...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAAAGGACTCCACCGAGTaGGACTCACTCTCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKKDSTE*DSLSSP
Trigger: AGGGGAGGAGAGTGAGTCCAACTCGGTGGAGTCCTT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAACCAGGGAGGCATCTTaGCTGAGGGCAAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKTREAS*LRAKSR
Trigger: CCTGGACTTTGCCCTCAGCAAAGATGCCTCCCTGGT...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAACCAGGGAGGCATCTTaGCTGAGGGCAAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTTREAS*LRAKSR
Trigger: CCTGGACTTTGCCCTCAGCAAAGATGCCTCCCTGGT...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAATCCACCCCCAGAGACTaGGGAAGGGAAAGAACGGGA +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKSTPRD*GRERTG
Trigger: TCCCGTTCTTTCCCTTCCCAAGTCTCTGGGGGTGGA...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACAGCCAAGGTATTGGTCTaGGGGTCCAGGCTCACACAA +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTAKVLV*GSRLTQ
Trigger: TTGTGTGAGCCTGGACCCCAAGACCAATACCTTGGC...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAAGCCAGGTCATCTGCTTaGGGGAGAGGGTTAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKARSSA*GRGLED
Trigger: ATCTTCTAACCCTCTCCCCAAAGCAGATGACCTGGC...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420660.5
CDS-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATCAAAATACTTTCGCTTaGTGGTCTCCTGACGTGGTC +
Preference number: 5 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNQNTFA*WSPDVV
Trigger: GACCACGTCAGGAGACCACAAAGCGAAAGTATTTTG...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp CTCCCCACATACAAATACACACCCCATGGCTCACACCAGCAAATGAAAGTGAAACAAAATACTTTCGCTTaGTGGTCTCCTGACGTGGTC +
Preference number: 5 (lower is better)
Translates to: LPTYKYTPHGSHQQMKVKQNTFA*WSPDVV
Trigger: GACCACGTCAGGAGACCACAAAGCGAAAGTATTTTG...TTTCACTTTCATTTGCTGGTGTGAGCCATGGGGTGTGTATTTGTATGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GACTTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATTTAACGGTCAGGCCTTaGGACACAAAATACTTTCGC +
Preference number: 5 (lower is better)
Translates to: DLGRERTGTSNTYSPHTNLTVRP*DTKYFR
Trigger: GCGAAAGTATTTTGTGTCCAAAGGCCTGACCGTTAA...ATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp GGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACACACTTAACGGTCAGGCCTTaGGACACAAAATACTTTCGC +
Preference number: 5 (lower is better)
Translates to: GRERTGTSNTYSPHTNTHLTVRP*DTKYFR
Trigger: GCGAAAGTATTTTGTGTCCAAAGGCCTGACCGTTAA...GTGTGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS-3UTR CAA 90 bp TTGGGAAGGGAAAGAACGGGAACCTCAAACACCTACTCCCCACATACAAATACATTAACGGTCAGGCCTTaGGACACAAAATACTTTCGC +
Preference number: 5 (lower is better)
Translates to: LGRERTGTSNTYSPHTNTLTVRP*DTKYFR
Trigger: GCGAAAGTATTTTGTGTCCAAAGGCCTGACCGTTAA...TGTATTTGTATGTGGGGAGTAGGTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
CDS GCA 72 bp GCAGGCGGCCGGTCCGGGCGTCCCAGAGGCGCACGATaGCATCCAGGCTGCAGGTATATACCACGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: AGGRSGRPRGAR*HPGCRYIPRQC
Trigger: GCACTGCCGTGGTATATACCTGCAGCCTGGATGGCATCGTGCGCCTCTGGGACGCCCGGACCGGCCGCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CAA 90 bp AGTCGGGAAAGCGGAGGCCCCAGCCGGGCTCCAGGTCCACTCACCTaGCCGGTGGTGGCACTGACCAGCTTGGCCTGGCAGTCCACAGAG +
Preference number: 6 (lower is better)
Translates to: SRESGGPSRAPGPLT*PVVALTSLAWQSTE
Trigger: CTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGAGTGGACCTGGAGCCCGGCTGGGGCCTCCGCTTTCCCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS GCA 72 bp ACTTCTCTGGGCCCAAACGCCTCCCAGAGTCAGCTCTaGGCGACGACGCGGAACTCGAGCCCCTCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: TSLGPNASQSQL*ATTRNSSPSSR
Trigger: CCGGGAGGAGGGGCTCGAGTTCCGCGTCGTCGCGCAGAGCTGACTCTGGGAGGCGTTTGGGCCCAGAGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444053.5
CDS CCA 72 bp GGACTCCATGCGGCGCAAGCGGCGGATCCACTTCTCTaGGCCCAAACGCCTCCCAGAGTCAGCTCTGCGCGA +
Preference number: 6 (lower is better)
Translates to: GLHAAQAADPLL*AQTPPRVSSAR
Trigger: TCGCGCAGAGCTGACTCTGGGAGGCGTTTGGGCCCAGAGAAGTGGATCCGCCGCTTGCGCCGCATGGAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444053.5
CDS TCA 72 bp GGCATCCTGGCCAGAGGAGCGTACCATGAAGACTCATaGGGGCCTGGACTCACACGCCCTGCCGTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: GILARGAYHEDS*GPGLTRPAVLP
Trigger: CGGGAGGACGGCAGGGCGTGTGAGTCCAGGCCCTCATGAGTCTTCATGGTACGCTCCTCTGGCCAGGATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465442.1
ENST00000494720.5
CDS GCA 72 bp TGTCAGCAGCAGCCCCGCTTTCCGATTCGGACTCCATaGGGCGCAAGCGGCGGATCCACTTCTCTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: CQQQPRFPIRTP*GASGGSTSLGP
Trigger: TGGGCCCAGAGAAGTGGATCCGCCGCTTGCGCCGCATGGAGTCCGAATCGGAAAGCGGGGCTGCTGCTGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248450.9
ENST00000444053.5
ENST00000461911.1
CDS GCA 72 bp GGTGTTGCCGTCAGCTGTGCCCGCCAACAGGACAGGTaGCCGAGGATGCCACTCCATCCACTGGACAGGGAG +
Preference number: 6 (lower is better)
Translates to: GVAVSCARQQDR*PRMPLHPLDRE
Trigger: CTCCCTGTCCAGTGGATGGAGTGGCATCCTCGGGCACCTGTCCTGTTGGCGGGCACAGCTGACGGCAACACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465442.1
CDS CCA 72 bp TCGTCGGGGCCCTCCATGCTGCCGACCACCCCTTCCTaGGGTTCTAGAACCCAGCCCTCTTCGTTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: SSGPSMLPTTPS*GSRTQPSSLPS
Trigger: AGAGGGCAACGAAGAGGGCTGGGTTCTAGAACCCCAGGAAGGGGTGGTCGGCAGCATGGAGGGCCCCGACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000461911.1
ENST00000475678.5
ENST00000489767.5
CDS TCA 72 bp GGGCTCCAGGTCCACTCACCTTGCCGGTGGTGGCACTaGCCAGCTTGGCCTGGCAGTCCACAGAGCCAGTTA +
Preference number: 6 (lower is better)
Translates to: GLQVHSPCRWWH*PAWPGSPQSQL
Trigger: TAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGAGTGGACCTGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS TCA 72 bp AGCTGCCAGGGGCATCCTGGCCAGAGGAGCGTACCATaGAGACTCATGAGGGCCTGGACTCACACGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SCQGHPGQRSVP*RLMRAWTHTPC
Trigger: GCAGGGCGTGTGAGTCCAGGCCCTCATGAGTCTTCATGGTACGCTCCTCTGGCCAGGATGCCCCTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465442.1
ENST00000494720.5
CDS GCA 72 bp GCCATCCAGGCTGCAGGTATATACCACGGCAGTGCCTaGCTCCCACAGCAGCTGCACGATGCCCGACTGGTG +
Preference number: 6 (lower is better)
Translates to: AIQAAGIYHGSA*LPQQLHDARLV
Trigger: CACCAGTCGGGCATCGTGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATACCTGCAGCCTGGATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS GCA 72 bp CGGCCTCTGCACCCAGGAAAGGTCACTCAAGGGAGGTaGTCTCACCATCAGGGAGGACTCGGCCACAGGTGG +
Preference number: 6 (lower is better)
Translates to: RPLHPGKVTQGR*SHHQGGLGHRW
Trigger: CCACCTGTGGCCGAGTCCTCCCTGATGGTGAGAGCACCTCCCTTGAGTGACCTTTCCTGGGTGCAGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS CAA 90 bp CGGGCTCCAGGTCCACTCACCTTGCCGGTGGTGGCACTGACCAGCTaGGCCTGGCAGTCCACAGAGCCAGTTAGGATCAAGCTGCCATCC +
Preference number: 6 (lower is better)
Translates to: RAPGPLTLPVVALTS*AWQSTEPVRIKLPS
Trigger: GGATGGCAGCTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGAGTGGACCTGGAGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS TCA 72 bp TCCTGGTTGGCAGCAACACAGGTGAGTGGGCCCTGGTaGCCCTCAGTCCCTAGCATAGAGCAGGGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SWLAATQVSGPW*PSVPSIEQGGS
Trigger: GCTGCCTCCCTGCTCTATGCTAGGGACTGAGGGTCACCAGGGCCCACTCACCTGTGTTGCTGCCAACCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS GCA 72 bp TCAGCTGTGCCCGCCAACAGGACAGGTGCCCGAGGATaGCACTCCATCCACTCCAGGTCTCCCGCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: SAVPANRTGARG*HSIHSRSPASK
Trigger: CTTTGAAGCGGGAGACCTGGAGTGGATGGAGTGGCATCCTCGGGCACCTGTCCTGTTGGCGGGCACAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000475678.5
ENST00000489767.5
CDS GCA 72 bp CGATGCCATCCAGGCTGCAGGTATATACCACGGCAGTaGCTGCCTCCCACAGCAGCTGCACGATGCCCGACT +
Preference number: 6 (lower is better)
Translates to: RCHPGCRYIPRQ*LPPTAAARCPT
Trigger: AGTCGGGCATCGTGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTATATACCTGCAGCCTGGATGGCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS GCA 72 bp TGCAGTCACCATTCGGGACTTTCCACATCCAGGTGTTaGCGTCAGCTGTGCCCGCCAACAGGACAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: CSHHSGLSTSRC*RQLCPPTGQVP
Trigger: GGGCACCTGTCCTGTTGGCGGGCACAGCTGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS CCA 72 bp ACCACCTTGCCGGTGGTGGCACTGACCAGCTTGGCCTaGCAGTCCACAGAGCCAGTTAGGATCAAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: TTLPVVALTSLA*QSTEPVRIKLP
Trigger: TGGCAGCTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
CDS CCA 72 bp CTCACCTTGCCGGTGGTGGCACTGACCAGCTTGGCCTaGCAGTCCACAGAGCCAGTTAGGATCAAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: LTLPVVALTSLA*QSTEPVRIKLP
Trigger: TGGCAGCTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CAA 72 bp ACACCCACCACCTTGCCGGTGGTGGCACTGACCAGCTaGGCCTGGCAGTCCACAGAGCCAGTTAGGATCAAG +
Preference number: 6 (lower is better)
Translates to: TPTTLPVVALTS*AWQSTEPVRIK
Trigger: CTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGGTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
CDS CAA 72 bp GGTCCACTCACCTTGCCGGTGGTGGCACTGACCAGCTaGGCCTGGCAGTCCACAGAGCCAGTTAGGATCAAG +
Preference number: 6 (lower is better)
Translates to: GPLTLPVVALTS*AWQSTEPVRIK
Trigger: CTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGAGTGGACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CAA 90 bp TGGAAGGTCTTGCAGTCACCATTCGGGACTTTCCACATCCAGGTGTaGCCGTCAGCTGTGCCCGCCAACAGGACAGGTGCCCGAGGATGC +
Preference number: 6 (lower is better)
Translates to: WKVLQSPFGTFHIQV*PSAVPANRTGARGC
Trigger: GCATCCTCGGGCACCTGTCCTGTTGGCGGGCACAGCTGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCAAGACCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS CAA 90 bp AGGACTCGGCCACAGGTGGCTGGGCAGTTGGGACCCTGGAAGGTCTaGCAGTCACCATTCGGGACTTTCCACATCCAGGTGTTGCCGTCA +
Preference number: 6 (lower is better)
Translates to: RTRPQVAGQLGPWKV*QSPFGTFHIQVLPS
Trigger: TGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTCCCAACTGCCCAGCCACCTGTGGCCGAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS GCA 72 bp CTGCTCTGGGAGGTGTATATCCCGGGATTCGGCCTCTaGACCCAGGAAAGGTCACTCAAGGGAGGTGCTCTC +
Preference number: 6 (lower is better)
Translates to: LLWEVYIPGFGL*TQERSLKGGAL
Trigger: GAGAGCACCTCCCTTGAGTGACCTTTCCTGGGTGCAGAGGCCGAATCCCGGGATATACACCTCCCAGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS GCA 72 bp CAGGCCTCAGATTTTGCCGGCTGTGACCCAGAAGGCTaGTCTGGGAGGTGTATATCCCGGGATTCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: QASDFAGCDPEG*SGRCISRDSAS
Trigger: AGAGGCCGAATCCCGGGATATACACCTCCCAGAGCAGCCTTCTGGGTCACAGCCGGCAAAATCTGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS GCA 72 bp AGGCGCTGTGAACTTTGGGGCCCAGGAGGTCAGCACTaGAAACAGCAGGCCTCAGATTTTGCCGGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: RRCELWGPGGQH*KQQASDFAGCD
Trigger: GTCACAGCCGGCAAAATCTGAGGCCTGCTGTTTGCAGTGCTGACCTCCTGGGCCCCAAAGTTCACAGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS CCA 72 bp GGCCAGGTCATCTGCTTTGGGGAGAGGGTTAGAAGATaGGGCTCGGGAGGCGGTAAGAGGTACGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: GQVICFGERVRR*GSGGGKRYGEK
Trigger: CTTCTCTCCGTACCTCTTACCGCCTCCCGAGCCCCATCTTCTAACCCTCTCCCCAAAGCAGATGACCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420660.5
CDS CCA 72 bp TCCTGTGCCTTGGGGCGCATTGGCTCAGAGCTGGCTTaGCGCAATAAAGGCAGAACTGGCCTCCCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: SCALGRIGSELA*RNKGRTGLPSL
Trigger: CAAGCTTGGGAGGCCAGTTCTGCCTTTATTGCGCCAAGCCAGCTCTGAGCCAATGCGCCCCAAGGCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465442.1
CDS CAA 72 bp TTGCAGTCACCATTCGGGACTTTCCACATCCAGGTGTaGCCGTCAGCTGTGCCCGCCAACAGGACAGGTGCC +
Preference number: 6 (lower is better)
Translates to: LQSPFGTFHIQV*PSAVPANRTGA
Trigger: GGCACCTGTCCTGTTGGCGGGCACAGCTGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS CAA 72 bp CAGGAGGTCAGCACTGCAAACAGCAGGCCTCAGATTTaGCCGGCTGTGACCCAGAAGGCTGCTCTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: QEVSTANSRPQI*PAVTQKAALGG
Trigger: ACCTCCCAGAGCAGCCTTCTGGGTCACAGCCGGCAAAATCTGAGGCCTGCTGTTTGCAGTGCTGACCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS CAA 90 bp GGTCTAAAAACACCCACCACCTTGCCGGTGGTGGCACTGACCAGCTaGGCCTGGCAGTCCACAGAGCCAGTTAGGATCAAGCTGCCATCC +
Preference number: 6 (lower is better)
Translates to: GLKTPTTLPVVALTS*AWQSTEPVRIKLPS
Trigger: GGATGGCAGCTTGATCCTAACTGGCTCTGTGGACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGGTGGGTGTTTTTAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
CDS CAA 90 bp TTTGGGGCCCAGGAGGTCAGCACTGCAAACAGCAGGCCTCAGATTTaGCCGGCTGTGACCCAGAAGGCTGCTCTGGGAGGTGTATATCCC +
Preference number: 6 (lower is better)
Translates to: FGAQEVSTANSRPQI*PAVTQKAALGGVYP
Trigger: GGGATATACACCTCCCAGAGCAGCCTTCTGGGTCACAGCCGGCAAAATCTGAGGCCTGCTGTTTGCAGTGCTGACCTCCTGGGCCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS CAA 90 bp CACTCAAAGAGCAGCTCCCCATCGCTGAGCCGCCATACGAAGGCTTaGTCATCTTCACCCCCGGTCACTGCCAAGGTATTGGTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: HSKSSSPSLSRHTKA*SSSPPVTAKVLVLG
Trigger: CCCCAAGACCAATACCTTGGCAGTGACCGGGGGTGAAGATGACAAAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGCTCTTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000461911.1
ENST00000475678.5
ENST00000489767.5
CDS TCA 72 bp CCTCACCTGCACACTCAAAGAGCAGCTCCCCATCGCTaGGCCGCCATACGAAGGCTTTGTCATCTTCACCCC +
Preference number: 6 (lower is better)
Translates to: PHLHTQRAAPHR*AAIRRLCHLHP
Trigger: GGGGTGAAGATGACAAAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGCTCTTTGAGTGTGCAGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461911.1
CDS TCA 72 bp GCACTGCAAACAGCAGGCCTCAGATTTTGCCGGCTGTaGCCCAGAAGGCTGCTCTGGGAGGTGTATATCCCG +
Preference number: 6 (lower is better)
Translates to: ALQTAGLRFCRL*PRRLLWEVYIP
Trigger: CGGGATATACACCTCCCAGAGCAGCCTTCTGGGTCACAGCCGGCAAAATCTGAGGCCTGCTGTTTGCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475678.5
CDS GCA 72 bp CACAGGTGGCTGGGCAGTTGGGACCCTGGAAGGTCTTaGAGTCACCATTCGGGACTTTCCACATCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: HRWLGSWDPGRS*SHHSGLSTSRC
Trigger: ACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCAAGACCTTCCAGGGTCCCAACTGCCCAGCCACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000465442.1
ENST00000475678.5
ENST00000489767.5
CDS GCA 72 bp ATAGATGGCCAAGGTCCCATCCAGGTAGCCAACAGCTaGCAGGGGCATCACACTGCAGAAGCCCAAGGACTC +
Preference number: 6 (lower is better)
Translates to: IDGQGPIQVANS*QGHHTAEAQGL
Trigger: GAGTCCTTGGGCTTCTGCAGTGTGATGCCCCTGGCAGCTGTTGGCTACCTGGATGGGACCTTGGCCATCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
CDS CAA 72 bp AGCAGCTCCCCATCGCTGAGCCGCCATACGAAGGCTTaGTCATCTTCACCCCCGGTCACTGCCAAGGTATTG +
Preference number: 6 (lower is better)
Translates to: SSSPSLSRHTKA*SSSPPVTAKVL
Trigger: CAATACCTTGGCAGTGACCGGGGGTGAAGATGACAAAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000461911.1
ENST00000475678.5
ENST00000489767.5
CDS CAA 90 bp TCCGCGGGGACTTTCCAGGTAGCAGGTAGATATTCTTCCTGTGCCTaGGGGCGCATTGGCTCAGAGCTGGCTTGGCGCAATAAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SAGTFQVAGRYSSCA*GRIGSELAWRNKGR
Trigger: TCTGCCTTTATTGCGCCAAGCCAGCTCTGAGCCAATGCGCCCCAAGGCACAGGAAGAATATCTACCTGCTACCTGGAAAGTCCCCGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465442.1
CDS TCA 72 bp TATGGCCTGCACACTCAAAGAGCAGCTCCCCATCGCTaGGCCGCCATACGAAGGCTTTGTCATCTTCACCCC +
Preference number: 6 (lower is better)
Translates to: YGLHTQRAAPHR*AAIRRLCHLHP
Trigger: GGGGTGAAGATGACAAAGCCTTCGTATGGCGGCTCAGCGATGGGGAGCTGCTCTTTGAGTGTGCAGGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000475678.5
ENST00000489767.5
CDS TCA 72 bp TCCTGGTTGGCAGCAACACAGGTGAGTGGGCCCTGGTaGCCCTCAGTCCCTCTGATACCTTTCAGTACATGG +
Preference number: 6 (lower is better)
Translates to: SWLAATQVSGPW*PSVPLIPFSTW
Trigger: CCATGTACTGAAAGGTATCAGAGGGACTGAGGGTCACCAGGGCCCACTCACCTGTGTTGCTGCCAACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422731.1
CDS GCA 72 bp CCATACGAAGGCTTTGTCATCTTCACCCCCGGTCACTaGCAAGGTATTGGTCTTGGGGTCCAGGCTCACACA +
Preference number: 6 (lower is better)
Translates to: PYEGFVIFTPGH*QGIGLGVQAHT
Trigger: TGTGTGAGCCTGGACCCCAAGACCAATACCTTGGCAGTGACCGGGGGTGAAGATGACAAAGCCTTCGTATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000461911.1
ENST00000475678.5
ENST00000489767.5
CDS CCA 72 bp CGGTCAGGCCTTTGGACACAAAATACTTTCGCTTTGTaGTCTCCTGACGTGGTCACCACCAGGGAGGCATCT +
Preference number: 6 (lower is better)
Translates to: RSGLWTQNTFAL*SPDVVTTREAS
Trigger: AGATGCCTCCCTGGTGGTGACCACGTCAGGAGACCACAAAGCGAAAGTATTTTGTGTCCAAAGGCCTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS TCA 72 bp TCATGTCCCCTGTGGCCACTAGAGTGGAGTCATGGCTaGAACCAGCACAAGTCACAGAGTCTTTATGGCCTG +
Preference number: 6 (lower is better)
Translates to: SCPLWPLEWSHG*NQHKSQSLYGL
Trigger: CAGGCCATAAAGACTCTGTGACTTGTGCTGGTTTCAGCCATGACTCCACTCTAGTGGCCACAGGGGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000444053.5
ENST00000447885.1
ENST00000475678.5
ENST00000489767.5
CDS TCA 72 bp CCTTTGGACACAAAATACTTTCGCTTTGTGGTCTCCTaGCGTGGTCACCACCAGGGAGGCATCTTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PLDTKYFRFVVS*RGHHQGGIFAE
Trigger: CTCAGCAAAGATGCCTCCCTGGTGGTGACCACGTCAGGAGACCACAAAGCGAAAGTATTTTGTGTCCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000248450.9
ENST00000420660.5
ENST00000422731.1
ENST00000444053.5
ENST00000475678.5
ENST00000489767.5
ENST00000494720.5
CDS CCA 72 bp CTAACACTTCCCCCACCTCTGATACCTTTCAGTACATaGATAGGGCTTCCCTGCTTCAGGTCCCAAATCCTG +
Preference number: 6 (lower is better)
Translates to: LTLPPPLIPFST*IGLPCFRSQIL
Trigger: CAGGATTTGGGACCTGAAGCAGGGAAGCCCTATCCATGTACTGAAAGGTATCAGAGGTGGGGGAAGTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475678.5