RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AAGAB (Homo sapiens)

Ensembl gene IDs: ENSG00000103591

Ensembl transcript IDs: ENST00000261880.10, ENST00000538028.1, ENST00000542650.5, ENST00000558725.5, ENST00000560362.1, ENST00000561229.1, ENST00000561452.5

Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTaGTCAGGAATTCATCGCCTAACATTTCACTTCCCCACCCACCCC +
Preference number: 1 (lower is better)
Translates to: LEGQRGATNLGRKTR*SGIHRLTFHFPTHP
Trigger: GGGGTGGGTGGGGAAGTGAAATGTTAGGCGATGAATTCCTGAGCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR TCA 90 bp TCACCCAGGAAAGGTGACACAACTCCTGATGTGCAGTATCAAGTGTaGATGCTGGAAATGCTACTTAAAAGGTTGACCAGGAATGGCCTG +
Preference number: 1 (lower is better)
Translates to: SPRKGDTTPDVQYQV*MLEMLLKRLTRNGL
Trigger: CAGGCCATTCCTGGTCAACCTTTTAAGTAGCATTTCCAGCATTCACACTTGATACTGCACATCAGGAGTTGTGTCACCTTTCCTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR TCA 90 bp AATCCCAGAGCCAACTTCCCTAATGCAATCACCTCAAAGAAACACTaGTGGGCTGGTGGTGAACCACAGACTCAAAGTCTTTCAGAACAG +
Preference number: 1 (lower is better)
Translates to: NPRANFPNAITSKKH*WAGGEPQTQSLSEQ
Trigger: CTGTTCTGAAAGACTTTGAGTCTGTGGTTCACCACCAGCCCATCAGTGTTTCTTTGAGGTGATTGCATTAGGGAAGTTGGCTCTGGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR TCA 90 bp TGTTTCAGGTTCTGCAGTGCTTATAAGGTAGTGTCTGGAGGGGTGTaGGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCAT +
Preference number: 1 (lower is better)
Translates to: CFRFCSAYKVVSGGV*ALFLSAPNPTCFFH
Trigger: ATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAGACACTACCTTATAAGCACTGCAGAACCTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR CCA 90 bp AATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATaGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACAT +
Preference number: 1 (lower is better)
Translates to: NFFMKITVCYHILSP*PIQGLLKVLSNIQH
Trigger: ATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR CCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCGCAACAACACAGCTCTaGCATCTCAAGCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFATTQL*HLKQQG
Trigger: CCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGC...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR TCA 90 bp TGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGGGGAGAACTCTAGAGCTACAAGCTCCTTaGATGGAGAAAACCCAAATC +
Preference number: 2 (lower is better)
Translates to: CRCATTQLWHLKQQGRTLELQAP*MEKTQI
Trigger: GATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTC...TAGAGTTCTCCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR TCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCTGCTACTTAAAAGGTTaGCCAGGAATGGCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFCYLKG*PGMAWR
Trigger: CCTCCAGGCCATTCCTGGTCAACCTTTTAAGTAGCA...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR TCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCGTGCAGTATCAAGTGTaGATGCTGGAAATGCTACTT +
Preference number: 2 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCVQYQV*MLEMLL
Trigger: AAGTAGCATTTCCAGCATTCACACTTGATACTGCAC...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR GCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCCTTGTTTTGCAGGTGTaGAACAACACAGCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFLVLQV*NNTALA
Trigger: TGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAG...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR GCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCAAATGTGCCTTGTTTTaGAGGTGTGCAACAACACAG +
Preference number: 2 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCKCALF*RCATTQ
Trigger: CTGTGTTGTTGCACACCTGCAAAACAAGGCACATTT...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR GCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCAGAAAGGGGGAAATGTaGCTTGTTTTGCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFRKGEM*LVLQVC
Trigger: GCACACCTGCAAAACAAGGCACATTTCCCCCTTTCT...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR TCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGGTTGTCTTCAACTTaGGTAAATCACACAGACCTC +
Preference number: 2 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSRLSST*VNHTDL
Trigger: GAGGTCTGTGTGATTTACTCAAGTTGAAGACAACCT...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR GCA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATACACAACTCCTGATGTaGAGTATCAAGTGTGAATGC +
Preference number: 2 (lower is better)
Translates to: ERGKCALFCRCATTQLWHTQLLM*SIKCEC
Trigger: GCATTCACACTTGATACTGCACATCAGGAGTTGTGT...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR CCA 90 bp TGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCACAAGGTTGACCAGGAATaGCCTGGAGGTTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: WPIQGLLKVLSNIQHIPHKVDQE*PGGCLQ
Trigger: TTGAAGACAACCTCCAGGCCATTCCTGGTCAACCTT...GTGGGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR TCA 90 bp AGGTTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAAATCACACAGACCTCTaGGATTTATCCTACCCTCAT +
Preference number: 2 (lower is better)
Translates to: RLQAWKGREELRTLEEKQNHTDL*DLSYPH
Trigger: ATGAGGGTAGGATAAATCTCAGAGGTCTGTGTGATT...TTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR CCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTAGGTTTTCTTCCCACTaGAATAGAAATCCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: LQAWKGREELRTLEEKQGRFSSH*NRNPLP
Trigger: AGGCAAAGGATTTCTATTCCAGTGGGAAGAAAACCT...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR CAA 90 bp CTACTTAAAAGGTTGACCAGGAATGGCCTGGAGGTTGTCTTCAACTaGAGTAAATCACACAGACCTCTGAGATTTATCCTACCCTCATTC +
Preference number: 2 (lower is better)
Translates to: LLKRLTRNGLEVVFN*SKSHRPLRFILPSF
Trigger: GAATGAGGGTAGGATAAATCTCAGAGGTCTGTGTGATTTACTCAAGTTGAAGACAACCTCCAGGCCATTCCTGGTCAACCTTTTAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR TCA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCAAATCACACAGACCTCTaGGATTTATCCTACCCTCAT +
Preference number: 2 (lower is better)
Translates to: TLPLKTCHLLISSSGADPNHTDL*DLSYPH
Trigger: ATGAGGGTAGGATAAATCTCAGAGGTCTGTGTGATT...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR GCA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCAAAATGTGCCTTGTTTTaGAGGTGTGCAACAACACAG +
Preference number: 2 (lower is better)
Translates to: TLPLKTCHLLISSSGADPKCALF*RCATTQ
Trigger: CTGTGTTGTTGCACACCTGCAAAACAAGGCACATTT...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR CCA 90 bp GAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATGAGGTTTTCTTCCCACTaGAATAGAAATCCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: EGCEPYFFLLLTQPVSFMRFSSH*NRNPLP
Trigger: AGGCAAAGGATTTCTATTCCAGTGGGAAGAAAACCT...CATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR TCA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATGAGCTACAAGCTCCTTaGATGGAGAAAACCCAAATC +
Preference number: 2 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHELQAP*MEKTQI
Trigger: GATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTC...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR TCA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATAGGTTGTCTTCAACTTaGGTAAATCACACAGACCTC +
Preference number: 2 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHRLSST*VNHTDL
Trigger: GAGGTCTGTGTGATTTACTCAAGTTGAAGACAACCT...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR CCA 72 bp TGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTaGCATCTCAAGCAGCAGGGGAGAACTCTAAGACAG +
Preference number: 3 (lower is better)
Translates to: CALFCRCATTQL*HLKQQGRTLRQ
Trigger: CTGTCTTAGAGTTCTCCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR CAA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCATGATAAGGGCAATTTaGGCAAAATATGACTGGGCT +
Preference number: 3 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCMIRAI*AKYDWA
Trigger: AGCCCAGTCATATTTTGCCAAAATTGCCCTTATCAT...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR CAA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGAGGTTGTCTTCAACTaGAGTAAATCACACAGACCT +
Preference number: 3 (lower is better)
Translates to: MCLVLQVCNNTALASQAAEVVFN*SKSHRP
Trigger: AGGTCTGTGTGATTTACTCAAGTTGAAGACAACCTC...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR TCA 72 bp TTCTGCAGTGCTTATAAGGTAGTGTCTGGAGGGGTGTaGGCCTTATTTCTTTCTGCTCCTAACCCAACCTGT +
Preference number: 3 (lower is better)
Translates to: FCSAYKVVSGGV*ALFLSAPNPTC
Trigger: ACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAGACACTACCTTATAAGCACTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR TCA 72 bp GCCAACTTCCCTAATGCAATCACCTCAAAGAAACACTaGTGGGCTGGTGGTGAACCACAGACTCAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: ANFPNAITSKKH*WAGGEPQTQSL
Trigger: AAGACTTTGAGTCTGTGGTTCACCACCAGCCCATCAGTGTTTCTTTGAGGTGATTGCATTAGGGAAGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR CAA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGGAGGTTGTCTTCAACTaGAGTAAATCACACAGACCT +
Preference number: 3 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPREVVFN*SKSHRP
Trigger: AGGTCTGTGTGATTTACTCAAGTTGAAGACAACCTC...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
3UTR-3UTR CAA 90 bp GAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATGATCCACACTGGCTTTTaGATTCTTTCTAGCATGAGC +
Preference number: 3 (lower is better)
Translates to: EGCEPYFFLLLTQPVSFMIHTGF*ILSSMS
Trigger: GCTCATGCTAGAAAGAATCAAAAAGCCAGTGTGGAT...CATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR CAA 90 bp CCAGCTGGCAATTCTGTAACAACTTGTGGTAGCATGAACATAGGTCACTTTAGAGGCAGTGATCTCTCTTaGGCTTTAAAGAGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: PAGNSVTTCGSMNIGHFRGSDLS*ALKRKG
Trigger: CCCCTTTCTCTTTAAAGCCAAAGAGAGATCACTGCC...TCTAAAGTGACCTATGTTCATGCTACCACAAGTTGTTACAGAATTGCCAGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261880.10
3UTR-3UTR CAA 90 bp ATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATACAAGGACTCATGATAAGGGCAATTTaGGCAAAATATGACTGGGCT +
Preference number: 3 (lower is better)
Translates to: MKITVCYHILSPWPIQGLMIRAI*AKYDWA
Trigger: AGCCCAGTCATATTTTGCCAAAATTGCCCTTATCAT...GAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp TCACTTCCCCACCCACCCCTTAGTGCTCCCACTTTGGCAGTGATCTCTCTTTGGGAACGCAGGGCCCGCTaGGGGGACAAGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SLPHPPLSAPTLAVISLWERRAR*GDKAQR
Trigger: TCTCTGGGCCTTGTCCCCGCAGCGGGCCCTGCGTTC...CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAGGGGTGGGTGGGGAAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR CCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCGGCCCAGAGAGGCCGTaGTGCTGGGTCCGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCGPERP*CWVRRP
Trigger: CGGGCGACGGACCCAGCACCACGGCCTCTCTGGGCC...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR GCA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATGCCAGCAGCCATAGCTaGGCTCGCGAGCCGGTTCCG +
Preference number: 4 (lower is better)
Translates to: ERGKCALFCRCATTQLWHASSHS*AREPVP
Trigger: CGGAACCGGCTCGCGAGCGCAGCTATGGCTGCTGGC...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGAGAGGCCGTGGTGCTaGGTCCGTCGCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRTLEEKQGERPWC*VRRPLR
Trigger: CCTCAGCGGGCGACGGACCCAGCACCACGGCCTCTC...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR TCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGGGTCCGTCGCCCGCTaGGGCTCAGGGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLGSVAR*GSGALE
Trigger: CTCCAAGGCCCCTGAGCCTCAGCGGGCGACGGACCC...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR GCA 90 bp TCACTTCCCCACCCACCCCTTAGTGCTCCCACTTTGGCAGTGATCTCTCTTTGGAGTTCTCAGCTGGTGTaGGGGCACCTTCCATCCACT +
Preference number: 4 (lower is better)
Translates to: SLPHPPLSAPTLAVISLWSSQLV*GHLPST
Trigger: AGTGGATGGAAGGTGCCCGCACACCAGCTGAGAACT...CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAGGGGTGGGTGGGGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR GCA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGCCAGAGAGGCCGTGGTaGTGGGTCCGTCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QNMTGLSREVSQRQLASLPERPW*WVRRPL
Trigger: CAGCGGGCGACGGACCCAGCACCACGGCCTCTCTGG...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR CCA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCAGAGGCTCAGGGGCCTTaGAGGTCGGCCCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TLPLKTCHLLISSSGADPEAQGP*RSAQAP
Trigger: AGGCGCCTGGGCCGACCTCCAAGGCCCCTGAGCCTC...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR TCA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCGGAGGAGCAGCTGGTaGCTAACGCACAGGGTACGC +
Preference number: 4 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPRRSSW*LTHRVR
Trigger: GCGTACCCTGTGCGTTAGTCACCAGCTGCTCCTCCG...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCTGCCAGTGGAAGCCATaGGGAGACACTATCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCCQWKP*GDTIKA
Trigger: GGCCTTGATAGTGTCTCCTCATGGCTTCCACTGGCA...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp CCAGCTGGCAATTCTGTAACAACTTGTGGTAGCATGAACATAGGTCACTTTAGAGCCAGCAGCCATAGCTaGGCTCGCGAGCCGGTTCCG +
Preference number: 4 (lower is better)
Translates to: PAGNSVTTCGSMNIGHFRASSHS*AREPVP
Trigger: CGGAACCGGCTCGCGAGCGCAGCTATGGCTGCTGGC...TCTAAAGTGACCTATGTTCATGCTACCACAAGTTGTTACAGAATTGCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCTGTTCCAAGGATATCTaGGGAGACTGGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCCSKDI*GDWAPP
Trigger: TGGAGGCGCCCAGTCTCCCCAGATATCCTTGGAACA...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR TCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCTGCCAGTGGAAGCCATaGGGAGACACTATCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPCQWKP*GDTIKA
Trigger: GGCCTTGATAGTGTCTCCTCATGGCTTCCACTGGCA...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp TGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGGGGAGAACTCTAGTGACAGGGATCTGCTaGCCCAATGCTATGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CRCATTQLWHLKQQGRTLVTGIC*PNAMVC
Trigger: ACAAACCATAGCATTGGGTCAGCAGATCCCTGTCAC...TAGAGTTCTCCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp TCACTTCCCCACCCACCCCTTAGTGCTCCCACTTTGGCAGTGATCTCTCTTTGGACATGGGATCCACAATaGTATCAACCTGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: SLPHPPLSAPTLAVISLWTWDPQ*YQPGHL
Trigger: CAGATGCCCAGGTTGATAGCATTGTGGATCCCATGT...CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAGGGGTGGGTGGGGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATACAAGGACTCGGCGCCTCCACTGACTaGAGGAAGAACGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MKITVCYHILSPWPIQGLGASTD*RKNAGP
Trigger: GGGCCCTGCGTTCTTCCTCCAGTCAGTGGAGGCGCC...GAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR CCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGATATCTGGGGAGACTaGGCGCCTCCACTGACTGGA +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRTLEEKQGDIWGD*APPLTG
Trigger: TCCAGTCAGTGGAGGCGCCCAGTCTCCCCAGATATC...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR TCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGATGCACCACCCCGATaGTCAGAGAGGGATTCAGTA +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPDAPPR*SERDSV
Trigger: TACTGAATCCCTCTCTGATCATCGGGGTGGTGCATC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp TCACTTCCCCACCCACCCCTTAGTGCTCCCACTTTGGCAGTGATCTCTCTTTGGGAGCTACAAGCTCCTTaGATGGAGAAAACCCAAATC +
Preference number: 4 (lower is better)
Translates to: SLPHPPLSAPTLAVISLWELQAP*MEKTQI
Trigger: GATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTC...CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAGGGGTGGGTGGGGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCACAGTTCCTCTGGGGCTaGCCCACTCAAACAAGACAA +
Preference number: 4 (lower is better)
Translates to: MCLVLQVCNNTALASQAAQFLWG*PTQTRQ
Trigger: TTGTCTTGTTTGAGTGGGTCAGCCCCAGAGGAACTG...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGAATGCTCCAGTCACTaGGCTGTCCCCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLECSSH*AVPSLW
Trigger: CCACAGGGAGGGGACAGCTCAGTGACTGGAGCATTC...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR TCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCTGGAAAGCCTCTTCCTaGATGCTCCAGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSWKASS*MLQSLS
Trigger: GCTCAGTGACTGGAGCATTCAGGAAGAGGCTTTCCA...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCAGTACTATCTGCTGCTaGCAAATGGGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCSTICC*QMGLLW
Trigger: CCAGAGCAACCCCATTTGCCAGCAGCAGATAGTACT...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp GCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAAGGTGCAACAACACAGCTCTaGCATCTCAAGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AQSYKLLEWRKPKSPRKGATTQL*HLKQQG
Trigger: CCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGC...ACCTTTCCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGTGACAGGGATCTGCTaGCCCAATGCTATGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPVTGIC*PNAMVC
Trigger: ACAAACCATAGCATTGGGTCAGCAGATCCCTGTCAC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCGATGCACCACCCCGATaGTCAGAGAGGGATTCAGTA +
Preference number: 4 (lower is better)
Translates to: MTGLSREVSQRQLASLLVDAPPR*SERDSV
Trigger: TACTGAATCCCTCTCTGATCATCGGGGTGGTGCATC...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCTGCTACTTAAAAGGTTaGCCAGGAATGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSCYLKG*PGMAWR
Trigger: CCTCCAGGCCATTCCTGGTCAACCTTTTAAGTAGCA...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGTGTCTGGAGGGGTGTaGGCCTTATTTCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPVSGGV*ALFLSA
Trigger: AGCAGAAAGAAATAAGGCTCACACCCCTCCAGACAC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATATATGTTGGACCAGCTaGTCTCCTGAGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: ERGKCALFCRCATTQLWHICWTS*SPEKTE
Trigger: CTCCGTCTTCTCAGGAGACCAGCTGGTCCAACATAT...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCGTTCCAAGGATATGTTaGACCAGCTGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSVPRIC*TSWSPE
Trigger: CTCAGGAGACCAGCTGGTCCAACATATCCTTGGAAC...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATAGTACTATCTGCTGCTaGCAAATGGGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ERGKCALFCRCATTQLWHSTICC*QMGLLW
Trigger: CCAGAGCAACCCCATTTGCCAGCAGCAGATAGTACT...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCCCATCCAGAATGCTTTaGCCACCTTTTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCPSRML*PPFLHA
Trigger: TGCATGCAGAAAAGGTGGCCAAAGCATTCTGGATGG...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGGCAACAACACAGCTCTaGCATCTCAAGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRATTQL*HLKQQG
Trigger: CCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGC...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp TGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCACTCACGTTGGACCAGCTaGTCTCCTGAGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: WPIQGLLKVLSNIQHIPHSRWTS*SPEKTE
Trigger: CTCCGTCTTCTCAGGAGACCAGCTGGTCCAACGTGA...GTGGGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS-3UTR CCA 90 bp GCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAAGGTCCTATCTACTCACGTTaGACCAGCTGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: AQSYKLLEWRKPKSPRKGPIYSR*TSWSPE
Trigger: CTCAGGAGACCAGCTGGTCCAACGTGAGTAGATAGG...ACCTTTCCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561452.5
3UTR CAA 72 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTaGGAAGAAAAACAAGGTGCTCAGGAATTCATCGCC +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRT*EEKQGAQEFIA
Trigger: GGCGATGAATTCCTGAGCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATCGGAGGAGCAGCTGGTaGCTAACGCACAGGGTACGC +
Preference number: 4 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHRRSSW*LTHRVR
Trigger: GCGTACCCTGTGCGTTAGTCACCAGCTGCTCCTCCG...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCGTTTGTTCCAGTCAATaGGTTGAGAAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCVCSSQ*VEKAKA
Trigger: GGCTTTAGCCTTCTCAACTCATTGACTGGAACAAAC...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCGATGCACCACCCCGATaGTCAGAGAGGGATTCAGTA +
Preference number: 4 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPDAPPR*SERDSV
Trigger: TACTGAATCCCTCTCTGATCATCGGGGTGGTGCATC...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCTTCAGTACTATCTGCTaGTGGCAAATGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPFSTIC*WQMGLL
Trigger: GAGCAACCCCATTTGCCAGCAGCAGATAGTACTGAA...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp TGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCACTCTGTCTCCCCCGATTaGCATCCAGAATGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: WPIQGLLKVLSNIQHIPHSVSPD*HPECFG
Trigger: GCCAAAGCATTCTGGATGGCAATCGGGGGAGACAGA...GTGGGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCTCTGTCTCCCCCGATTaGCATCCAGAATGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPSVSPD*HPECFG
Trigger: GCCAAAGCATTCTGGATGGCAATCGGGGGAGACAGA...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCCTTGTTTTGCAGGTGTaGAACAACACAGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSLVLQV*NNTALA
Trigger: TGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAG...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp TGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGGGGAGAACTCTAAAATGTGCCTTGTTTTaGAGGTGTGCAACAACACAG +
Preference number: 4 (lower is better)
Translates to: CRCATTQLWHLKQQGRTLKCALF*RCATTQ
Trigger: CTGTGTTGTTGCACACCTGCAAAACAAGGCACATTT...TAGAGTTCTCCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCCATTGGACCACACATTaGCATTCAGGGCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPHWTTH*HSGLGQ
Trigger: TTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATG...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCCATCCAGAATGCTTTaGCCACCTTTTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: ERGKCALFCRCATTQLWHPSRML*PPFLHA
Trigger: TGCATGCAGAAAAGGTGGCCAAAGCATTCTGGATGG...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAAGGTTGACCAGGAATaGCCTGGAGGTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSKVDQE*PGGCLQ
Trigger: TTGAAGACAACCTCCAGGCCATTCCTGGTCAACCTT...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CAATTTTGGCAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTATGCCAGTGGAAGCCATaGGGAGACACTATCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QFWQNMTGLSREVSQRQLCQWKP*GDTIKA
Trigger: GGCCTTGATAGTGTCTCCTCATGGCTTCCACTGGCA...TAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTGCCAAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp TGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGGGGAGAACTCTAATTCAAAGCCATGTTTaGTGCACCATTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: CRCATTQLWHLKQQGRTLIQSHV*CTILEL
Trigger: AAGCTCAAGAATGGTGCATCAAACATGGCTTTGAAT...TAGAGTTCTCCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGTTTGTTCCAGTCAATaGGTTGAGAAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPVCSSQ*VEKAKA
Trigger: GGCTTTAGCCTTCTCAACTCATTGACTGGAACAAAC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAACTTTTCTTTGCTCATaGGGAAGCGTCGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKTFLCS*GSVAAL
Trigger: CAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAAGT...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp TGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGGGGAGAACTCTAGGTCAAACCCTAGTATaGATAATTCAGTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CRCATTQLWHLKQQGRTLGQTLV*IIQCSS
Trigger: TGAAGAGCACTGAATTATTCATACTAGGGTTTGACC...TAGAGTTCTCCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGTGCTACTTAAAAGGTTaGCCAGGAATGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRCYLKG*PGMAWR
Trigger: CCTCCAGGCCATTCCTGGTCAACCTTTTAAGTAGCA...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCTGCTTGGACAGATTCTaGAATCTCTGCAGTAACAAG +
Preference number: 4 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCCLDRF*NLCSNK
Trigger: CTTGTTACTGCAGAGATTGCAGAATCTGTCCAAGCA...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGATCTGCTGACCCAATaGTATGGTTTGTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPDLLTQ*YGLFQS
Trigger: TGACTGGAACAAACCATAGCATTGGGTCAGCAGATC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTACATGGGATCCACAATaGTATCAACCTGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRTLEEKQGTWDPQ*YQPGHL
Trigger: CAGATGCCCAGGTTGATAGCATTGTGGATCCCATGT...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCGATTGCCATCCAGAATaGTTTGGCCACCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: MTGLSREVSQRQLASLLVDCHPE*FGHLFC
Trigger: GCAGAAAAGGTGGCCAAAGCATTCTGGATGGCAATC...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGTCTGTCTCCCCCGATTaGCATCCAGAATGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLSVSPD*HPECFG
Trigger: GCCAAAGCATTCTGGATGGCAATCGGGGGAGACAGA...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp GCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAAGGTCTTGTTTTGCAGGTGTaGAACAACACAGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AQSYKLLEWRKPKSPRKGLVLQV*NNTALA
Trigger: TGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAG...ACCTTTCCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp AGGTTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAAGAAAGGGGGAAATGTaGCTTGTTTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RLQAWKGREELRTLEEKQRKGEM*LVLQVC
Trigger: GCACACCTGCAAAACAAGGCACATTTCCCCCTTTCT...TTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCATCCACTGTACTATGTaGCAGTTCAGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: MTGLSREVSQRQLASLLVIHCTM*QFRATA
Trigger: TGCTGTGGCTCTGAACTGGCACATAGTACAGTGGAT...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCCTCAGGCAACTCCTCTaGACTAAGTTCTACCAATTC +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPLRQLL*TKFYQF
Trigger: GAATTGGTAGAACTTAGTCCAGAGGAGTTGCCTGAG...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCTTGGCATTCAGGGCTTaGACAATTCGCTTTACTCCT +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPLAFRA*TIRFTP
Trigger: AGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAA...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGGTGACAGGGATCTGCTaGCCCAATGCTATGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QNMTGLSREVSQRQLASLVTGIC*PNAMVC
Trigger: ACAAACCATAGCATTGGGTCAGCAGATCCCTGTCAC...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGACTTTTCTTTGCTCATaGGGAAGCGTCGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLTFLCS*GSVAAL
Trigger: CAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAAGT...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAAATCACACAGACCTCTaGGATTTATCCTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: MCLVLQVCNNTALASQAANHTDL*DLSYPH
Trigger: ATGAGGGTAGGATAAATCTCAGAGGTCTGTGTGATT...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAAGGTTGTCTTCAACTTaGGTAAATCACACAGACCTC +
Preference number: 4 (lower is better)
Translates to: MCLVLQVCNNTALASQAARLSST*VNHTDL
Trigger: GAGGTCTGTGTGATTTACTCAAGTTGAAGACAACCT...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGGCCCGATTTTTGTGTaGTGTCAAAGTAAACCACAA +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPGPIFV*CQSKPQ
Trigger: TTGTGGTTTACTTTGACAGCACACAAAAATCGGGCC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATGGCCCGATTTTTGTGTaGTGTCAAAGTAAACCACAA +
Preference number: 4 (lower is better)
Translates to: ERGKCALFCRCATTQLWHGPIFV*CQSKPQ
Trigger: TTGTGGTTTACTTTGACAGCACACAAAAATCGGGCC...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGATCTGCTGACCCAATaGTATGGTTTGTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRTLEEKQGDLLTQ*YGLFQS
Trigger: TGACTGGAACAAACCATAGCATTGGGTCAGCAGATC...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCATCTGTTGTGTTAGATaGACCACCCCGATGATCAGA +
Preference number: 4 (lower is better)
Translates to: MTGLSREVSQRQLASLLVICCVR*TTPMIR
Trigger: TCTGATCATCGGGGTGGTGCATCTAACACAACAGAT...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp GCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAAGGTATCTGTTGTGTTAGATaGACCACCCCGATGATCAGA +
Preference number: 4 (lower is better)
Translates to: AQSYKLLEWRKPKSPRKGICCVR*TTPMIR
Trigger: TCTGATCATCGGGGTGGTGCATCTAACACAACAGAT...ACCTTTCCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAACATGGGATCCACAATaGTATCAACCTGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKTWDPQ*YQPGHL
Trigger: CAGATGCCCAGGTTGATAGCATTGTGGATCCCATGT...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAGATTGCCATCCAGAATaGTTTGGCCACCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKDCHPE*FGHLFC
Trigger: GCAGAAAAGGTGGCCAAAGCATTCTGGATGGCAATC...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAACACAACTCCTGATGTaGAGTATCAAGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: MCLVLQVCNNTALASQAATQLLM*SIKCEC
Trigger: GCATTCACACTTGATACTGCACATCAGGAGTTGTGT...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCACACAACTCCTGATGTaGAGTATCAAGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSTQLLM*SIKCEC
Trigger: GCATTCACACTTGATACTGCACATCAGGAGTTGTGT...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp AGGTTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAACTCAGGCAACTCCTCTaGACTAAGTTCTACCAATTC +
Preference number: 4 (lower is better)
Translates to: RLQAWKGREELRTLEEKQLRQLL*TKFYQF
Trigger: GAATTGGTAGAACTTAGTCCAGAGGAGTTGCCTGAG...TTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp GCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAAGGTTACTCCTGTAGATTCTaGGAAGTCATCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AQSYKLLEWRKPKSPRKGYSCRF*EVIILL
Trigger: GAGGAGGATGATGACTTCCCAGAATCTACAGGAGTA...ACCTTTCCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCTTGGCATTCAGGGCTTaGACAATTCGCTTTACTCCT +
Preference number: 4 (lower is better)
Translates to: MTGLSREVSQRQLASLLVLAFRA*TIRFTP
Trigger: AGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAA...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp TGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCACCATTGGACCACACATTaGCATTCAGGGCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: WPIQGLLKVLSNIQHIPHHWTTH*HSGLGQ
Trigger: TTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATG...GTGGGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp AGGTTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGCTGACCCAATGCTATaGTTTGTTCCAGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: RLQAWKGREELRTLEEKQADPML*FVPVNE
Trigger: CTCATTGACTGGAACAAACCATAGCATTGGGTCAGC...TTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGAGTACTATCTGCTGCTaGCAAATGGGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QNMTGLSREVSQRQLASLSTICC*QMGLLW
Trigger: CCAGAGCAACCCCATTTGCCAGCAGCAGATAGTACT...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCTACAAGCTCCTTGAATaGAGAAAACCCAAATCACCC +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPYKLLE*RKPKSP
Trigger: GGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTA...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGCACCACACATAGATTaGTGTCTGCTGAATAGTATT +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPAPHID*CLLNSI
Trigger: AATACTATTCAGCAGACATCAATCTATGTGTGGTGC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAGTTTGTTCCAGTCAATaGGTTGAGAAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKVCSSQ*VEKAKA
Trigger: GGCTTTAGCCTTCTCAACTCATTGACTGGAACAAAC...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp CCAGCTGGCAATTCTGTAACAACTTGTGGTAGCATGAACATAGGTCACTTTAGAACTTTTCTTTGCTCATaGGGAAGCGTCGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PAGNSVTTCGSMNIGHFRTFLCS*GSVAAL
Trigger: CAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAAGT...TCTAAAGTGACCTATGTTCATGCTACCACAAGTTGTTACAGAATTGCCAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR TCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGTGCTCTTCATCAGATaGAAGGCCTTCAATTTCATC +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRTLEEKQGVLFIR*KAFNFI
Trigger: GATGAAATTGAAGGCCTTTCATCTGATGAAGAGCAC...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTAATCACACAGACCTCTaGGATTTATCCTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRTLEEKQGNHTDL*DLSYPH
Trigger: ATGAGGGTAGGATAAATCTCAGAGGTCTGTGTGATT...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCGTGCAGTATCAAGTGTaGATGCTGGAAATGCTACTT +
Preference number: 4 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFVQYQV*MLEMLL
Trigger: AAGTAGCATTTCCAGCATTCACACTTGATACTGCAC...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR GCA 90 bp GCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAAGGTTGCTTGGACAGATTCTaGAATCTCTGCAGTAACAAG +
Preference number: 4 (lower is better)
Translates to: AQSYKLLEWRKPKSPRKGCLDRF*NLCSNK
Trigger: CTTGTTACTGCAGAGATTGCAGAATCTGTCCAAGCA...ACCTTTCCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGGCCCGATTTTTGTGTaGTGTCAAAGTAAACCACAA +
Preference number: 4 (lower is better)
Translates to: LQAWKGREELRTLEEKQGGPIFV*CQSKPQ
Trigger: TTGTGGTTTACTTTGACAGCACACAAAAATCGGGCC...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCATTCAGTACTATCTGCTaGTGGCAAATGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TLPLKTCHLLISSSGADPFSTIC*WQMGLL
Trigger: GAGCAACCCCATTTGCCAGCAGCAGATAGTACTGAA...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAATACTCCTGTAGATTCTaGGAAGTCATCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKYSCRF*EVIILL
Trigger: GAGGAGGATGATGACTTCCCAGAATCTACAGGAGTA...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp AAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCACTCAAACAAGACTTGGCATTCAGGGCTTaGACAATTCGCTTTACTCCT +
Preference number: 4 (lower is better)
Translates to: KTCHLLISSSGADPLKQDLAFRA*TIRFTP
Trigger: AGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAA...GTCTTGTTTGAGTGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCTCTTCATCACTACATTaGACCACACATTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: GLSREVSQRQLASLLVKPSSSLH*TTHWHS
Trigger: TGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGA...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp GAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATGGCTGACCCAATGCTATaGTTTGTTCCAGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: EGCEPYFFLLLTQPVSFMADPML*FVPVNE
Trigger: CTCATTGACTGGAACAAACCATAGCATTGGGTCAGC...CATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAGCTGACCCAATGCTATaGTTTGTTCCAGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKADPML*FVPVNE
Trigger: CTCATTGACTGGAACAAACCATAGCATTGGGTCAGC...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCACAATGCTATCAACCTaGGCATCTGTTGTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSTMLST*ASVVLD
Trigger: ATCTAACACAACAGATGCCCAGGTTGATAGCATTGT...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGCCATCCAGAATGCTTTaGCCACCTTTTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLPSRML*PPFLHA
Trigger: TGCATGCAGAAAAGGTGGCCAAAGCATTCTGGATGG...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAAGGTTTTCTTCCCACTaGAATAGAAATCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: MCLVLQVCNNTALASQAARFSSH*NRNPLP
Trigger: AGGCAAAGGATTTCTATTCCAGTGGGAAGAAAACCT...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATTCAAAGCCATGTTTaGTGCACCATTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFIQSHV*CTILEL
Trigger: AAGCTCAAGAATGGTGCATCAAACATGGCTTTGAAT...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR TCA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGACTGGCTAATTCTTaGATATCCAGATCTAACATG +
Preference number: 4 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSRLANS*ISRSNM
Trigger: CATGTTAGATCTGGATATTCAAGAATTAGCCAGTCT...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCGTGCTCTTCATCAGATaGAAGGCCTTCAATTTCATC +
Preference number: 4 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPVLFIR*KAFNFI
Trigger: GATGAAATTGAAGGCCTTTCATCTGATGAAGAGCAC...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATCAGTTCCTCTGGGGCTaGCCCACTCAAACAAGACAA +
Preference number: 4 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHQFLWG*PTQTRQ
Trigger: TTGTCTTGTTTGAGTGGGTCAGCCCCAGAGGAACTG...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGATCTGCTGACCCAATaGTATGGTTTGTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLDLLTQ*YGLFQS
Trigger: TGACTGGAACAAACCATAGCATTGGGTCAGCAGATC...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGATCTGTTGTGTTAGATaGACCACCCCGATGATCAGA +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLICCVR*TTPMIR
Trigger: TCTGATCATCGGGGTGGTGCATCTAACACAACAGAT...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp ATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATACAAGGACTCGATTGCCATCCAGAATaGTTTGGCCACCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: MKITVCYHILSPWPIQGLDCHPE*FGHLFC
Trigger: GCAGAAAAGGTGGCCAAAGCATTCTGGATGGCAATC...GAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAATGTGCCTTGTTTTaGAGGTGTGCAACAACACAG +
Preference number: 4 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRKCALF*RCATTQ
Trigger: CTGTGTTGTTGCACACCTGCAAAACAAGGCACATTT...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp CAATTTTGGCAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAAGAAAGGGGGAAATGTaGCTTGTTTTGCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: QFWQNMTGLSREVSQRQLRKGEM*LVLQVC
Trigger: GCACACCTGCAAAACAAGGCACATTTCCCCCTTTCT...TAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTGCCAAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAAGAAGCAGGACTTTCTaGCTCTGGGAAAACTCTAAA +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKRSRTF*LWENSK
Trigger: TTTAGAGTTTTCCCAGAGGCAGAAAGTCCTGCTTCT...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542650.5
CDS-3UTR CCA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCACTCAGGCAACTCCTCTaGACTAAGTTCTACCAATTC +
Preference number: 4 (lower is better)
Translates to: TLPLKTCHLLISSSGADPLRQLL*TKFYQF
Trigger: GAATTGGTAGAACTTAGTCCAGAGGAGTTGCCTGAG...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATACAAGGACTCCATTGGACCACACATTaGCATTCAGGGCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: MKITVCYHILSPWPIQGLHWTTH*HSGLGQ
Trigger: TTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATG...GAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAGAAGGCTAAAGCCTTaGTTCCTATCATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: MTGLSREVSQRQLASLLVRRLKP*FLSFFI
Trigger: GATGAAGAATGATAGGAACCAAGGCTTTAGCCTTCT...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATTATCCAGATCTAACATaGGATCCACAATGCTATCAA +
Preference number: 4 (lower is better)
Translates to: ERGKCALFCRCATTQLWHYPDLT*DPQCYQ
Trigger: TTGATAGCATTGTGGATCCCATGTTAGATCTGGATA...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGTACAAGCTCCTTGAATaGAGAAAACCCAAATCACCC +
Preference number: 4 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRYKLLE*RKPKSP
Trigger: GGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTA...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAAGGACTTTCTGCCTCTaGGAAAACTCTAAAACCGTT +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKRTFCL*ENSKTV
Trigger: AACGGTTTTAGAGTTTTCCCAGAGGCAGAAAGTCCT...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542650.5
CDS-3UTR TCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAGCACCACACATAGATTaGTGTCTGCTGAATAGTATT +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKAPHID*CLLNSI
Trigger: AATACTATTCAGCAGACATCAATCTATGTGTGGTGC...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTGCTCTTCATCAGATaGAAGGCCTTCAATTTCATC +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLVLFIR*KAFNFI
Trigger: GATGAAATTGAAGGCCTTTCATCTGATGAAGAGCAC...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAGGTCAAACCCTAGTATaGATAATTCAGTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKGQTLV*IIQCSS
Trigger: TGAAGAGCACTGAATTATTCATACTAGGGTTTGACC...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGAGGTTGTCTTCAACTTaGGTAAATCACACAGACCTC +
Preference number: 4 (lower is better)
Translates to: QNMTGLSREVSQRQLASLRLSST*VNHTDL
Trigger: GAGGTCTGTGTGATTTACTCAAGTTGAAGACAACCT...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCGAGGTCTTAAAAACATaGCATTACATATGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFEVLKT*HYICRV
Trigger: TACCCTGCATATGTAATGTCATGTTTTTAAGACCTC...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR GCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGTGCTTGGACAGATTCTaGAATCTCTGCAGTAACAAG +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLCLDRF*NLCSNK
Trigger: CTTGTTACTGCAGAGATTGCAGAATCTGTCCAAGCA...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGAGAGGCCAATATCCCTaGATAGCTGAGGTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QNMTGLSREVSQRQLASLRGQYP*IAEVLK
Trigger: TTTTAAGACCTCAGCTATGCAGGGATATTGGCCTCT...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp GAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATGTCTTCATCACTACATTaGACCACACATTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: EGCEPYFFLLLTQPVSFMSSSLH*TTHWHS
Trigger: TGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGA...CATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCTCTTCATCACTACATTaGACCACACATTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPSSSLH*TTHWHS
Trigger: TGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGA...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCAGAAGGCTAAAGCCTTaGTTCCTATCATTCTTCATC +
Preference number: 4 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPRRLKP*FLSFFI
Trigger: GATGAAGAATGATAGGAACCAAGGCTTTAGCCTTCT...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAACAATGCTATCAACCTaGGCATCTGTTGTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKTMLST*ASVVLD
Trigger: ATCTAACACAACAGATGCCCAGGTTGATAGCATTGT...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCTATCCAGATCTAACATaGGATCCACAATGCTATCAA +
Preference number: 4 (lower is better)
Translates to: MTGLSREVSQRQLASLLVYPDLT*DPQCYQ
Trigger: TTGATAGCATTGTGGATCCCATGTTAGATCTGGATA...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CCA 90 bp AGGTTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAATATCCAGATCTAACATaGGATCCACAATGCTATCAA +
Preference number: 4 (lower is better)
Translates to: RLQAWKGREELRTLEEKQYPDLT*DPQCYQ
Trigger: TTGATAGCATTGTGGATCCCATGTTAGATCTGGATA...TTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGATTCAAAGCCATGTTTaGTGCACCATTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLIQSHV*CTILEL
Trigger: AAGCTCAAGAATGGTGCATCAAACATGGCTTTGAAT...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAAGACTGGCTAATTCTTaGATATCCAGATCTAACATG +
Preference number: 4 (lower is better)
Translates to: TGLSREVSQRQLASLLVKRLANS*ISRSNM
Trigger: CATGTTAGATCTGGATATTCAAGAATTAGCCAGTCT...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR TCA 90 bp TGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCACAGACTGGCTAATTCTTaGATATCCAGATCTAACATG +
Preference number: 4 (lower is better)
Translates to: WPIQGLLKVLSNIQHIPHRLANS*ISRSNM
Trigger: CATGTTAGATCTGGATATTCAAGAATTAGCCAGTCT...GTGGGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp ATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATACAAGGACTCGTGCAGTATCAAGTGTaGATGCTGGAAATGCTACTT +
Preference number: 4 (lower is better)
Translates to: MKITVCYHILSPWPIQGLVQYQV*MLEMLL
Trigger: AAGTAGCATTTCCAGCATTCACACTTGATACTGCAC...GAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp CTGGAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCAAAGTAAACCACAAATaGTTGGACAGATTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LEGCEPYFFLLLTQPVSFKVNHK*LDRFCN
Trigger: ATTGCAGAATCTGTCCAAGCATTTGTGGTTTACTTT...GAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCAACAATGCTATCAACCTaGGCATCTGTTGTGTTAGAT +
Preference number: 4 (lower is better)
Translates to: TLPLKTCHLLISSSGADPTMLST*ASVVLD
Trigger: ATCTAACACAACAGATGCCCAGGTTGATAGCATTGT...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATAAGGTTGACCAGGAATaGCCTGGAGGTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHKVDQE*PGGCLQ
Trigger: TTGAAGACAACCTCCAGGCCATTCCTGGTCAACCTT...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CCA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGAGGTTTTCTTCCCACTaGAATAGAAATCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: QNMTGLSREVSQRQLASLRFSSH*NRNPLP
Trigger: AGGCAAAGGATTTCTATTCCAGTGGGAAGAAAACCT...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CAATTTTGGCAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCACCACACATAGATTaGTGTCTGCTGAATAGTATT +
Preference number: 4 (lower is better)
Translates to: QFWQNMTGLSREVSQRQLAPHID*CLLNSI
Trigger: AATACTATTCAGCAGACATCAATCTATGTGTGGTGC...TAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTGCCAAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR TCA 90 bp CCAGCTGGCAATTCTGTAACAACTTGTGGTAGCATGAACATAGGTCACTTTAGAATATCCCTGCATAGCTaGGGTCTTAAAAACATGACA +
Preference number: 4 (lower is better)
Translates to: PAGNSVTTCGSMNIGHFRISLHS*GLKNMT
Trigger: TGTCATGTTTTTAAGACCTCAGCTATGCAGGGATAT...TCTAAAGTGACCTATGTTCATGCTACCACAAGTTGTTACAGAATTGCCAGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR GCA 90 bp ATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATACAAGGACTCATCTGTTTCAGGTTCTaGAGTGCTTATAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: MKITVCYHILSPWPIQGLICFRF*SAYKVV
Trigger: CACTACCTTATAAGCACTGCAGAACCTGAAACAGAT...GAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CCA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATTACTCCTGTAGATTCTaGGAAGTCATCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHYSCRF*EVIILL
Trigger: GAGGAGGATGATGACTTCCCAGAATCTACAGGAGTA...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGAAAGTAAACCACAAATaGTTGGACAGATTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: NMTGLSREVSQRQLASLLKVNHK*LDRFCN
Trigger: ATTGCAGAATCTGTCCAAGCATTTGTGGTTTACTTT...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR GCA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCAAAAGTAAACCACAAATaGTTGGACAGATTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TLPLKTCHLLISSSGADPKVNHK*LDRFCN
Trigger: ATTGCAGAATCTGTCCAAGCATTTGTGGTTTACTTT...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR GCA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGAACCTGTTTCTTTCATaGTGTGTAAATGGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: QNMTGLSREVSQRQLASLNLFLS*CVNGSR
Trigger: TCTAGAACCATTTACACAGCATGAAAGAAACAGGTT...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS TCA 90 bp GGGGACAAGGCCCAGAGAGGCCGTGGTGCTGGGTCCGTCGCCCGCTaGGGCTCAGGGGCCTTGGAGGTCGGCCCAGGCGCCTATCTACTC +
Preference number: 5 (lower is better)
Translates to: GDKAQRGRGAGSVAR*GSGALEVGPGAYLL
Trigger: GAGTAGATAGGCGCCTGGGCCGACCTCCAAGGCCCCTGAGCCTCAGCGGGCGACGGACCCAGCACCACGGCCTCTCTGGGCCTTGTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS CCA 90 bp GAGGCCGTGGTGCTGGGTCCGTCGCCCGCTGAGGCTCAGGGGCCTTaGAGGTCGGCCCAGGCGCCTATCTACTCACGTTGGACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EAVVLGPSPAEAQGP*RSAQAPIYSRWTSW
Trigger: CCAGCTGGTCCAACGTGAGTAGATAGGCGCCTGGGCCGACCTCCAAGGCCCCTGAGCCTCAGCGGGCGACGGACCCAGCACCACGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS CCA 90 bp GCTCAGGGGCCTTGGAGGTCGGCCCAGGCGCCTATCTACTCACGTTaGACCAGCTGGTCTCCTGAGAAGACGGAGGAGCAGCTGGTGACT +
Preference number: 5 (lower is better)
Translates to: AQGPWRSAQAPIYSR*TSWSPEKTEEQLVT
Trigger: AGTCACCAGCTGCTCCTCCGTCTTCTCAGGAGACCAGCTGGTCCAACGTGAGTAGATAGGCGCCTGGGCCGACCTCCAAGGCCCCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS CCA 90 bp CTTCTGTTCCAAGGATATCTGGGGAGACTGGGCGCCTCCACTGACTaGAGGAAGAACGCAGGGCCCGCTGCGGGGACAAGGCCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LLFQGYLGRLGASTD*RKNAGPAAGTRPRE
Trigger: CTCTCTGGGCCTTGTCCCCGCAGCGGGCCCTGCGTTCTTCCTCCAGTCAGTGGAGGCGCCCAGTCTCCCCAGATATCCTTGGAACAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS TCA 90 bp AGATCTTCTGTTCCAAGGATATCTGGGGAGACTGGGCGCCTCCACTaGCTGGAGGAAGAACGCAGGGCCCGCTGCGGGGACAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RSSVPRISGETGRLH*LEEERRARCGDKAQ
Trigger: CTGGGCCTTGTCCCCGCAGCGGGCCCTGCGTTCTTCCTCCAGTCAGTGGAGGCGCCCAGTCTCCCCAGATATCCTTGGAACAGAAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS CCA 90 bp CCTTGGAGGTCGGCCCAGGCGCCTATCTACTCACGTTGGACCAGCTaGTCTCCTGAGAAGACGGAGGAGCAGCTGGTGACTAACGCACAG +
Preference number: 5 (lower is better)
Translates to: PWRSAQAPIYSRWTS*SPEKTEEQLVTNAQ
Trigger: CTGTGCGTTAGTCACCAGCTGCTCCTCCGTCTTCTCAGGAGACCAGCTGGTCCAACGTGAGTAGATAGGCGCCTGGGCCGACCTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS CCA 90 bp CGGAGAGCCTTCAGGTTCATCTCAACGGATCCTCGCAAAAACCTGTaGCCTGGGCTGAGCAGAGCGGGAAATCAGTCTCACTTTACACAG +
Preference number: 5 (lower is better)
Translates to: RRAFRFISTDPRKNL*PGLSRAGNQSHFTQ
Trigger: CTGTGTAAAGTGAGACTGATTTCCCGCTCTGCTCAGCCCAGGCCACAGGTTTTTGCGAGGATCCGTTGAGATGAACCTGAAGGCTCTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561229.1
CDS-3UTR CAA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCTGCTGGCAAATGGGGTaGCTCTGGGTGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCCWQMG*LWVTGI
Trigger: GATCCCTGTCACCCAGAGCAACCCCATTTGCCAGCA...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp TCACTTCCCCACCCACCCCTTAGTGCTCCCACTTTGGCAGTGATCTCTCTTTGGGCCATCCAGAATGCTTaGGCCACCTTTTCTGCATGC +
Preference number: 5 (lower is better)
Translates to: SLPHPPLSAPTLAVISLWAIQNA*ATFSAC
Trigger: GCATGCAGAAAAGGTGGCCAAAGCATTCTGGATGGC...CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAGGGGTGGGTGGGGAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCTGCTGGCAAATGGGGTaGCTCTGGGTGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: GLSREVSQRQLASLLVKPCWQMG*LWVTGI
Trigger: GATCCCTGTCACCCAGAGCAACCCCATTTGCCAGCA...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCGCCATCCAGAATGCTTaGGCCACCTTTTCTGCATGC +
Preference number: 5 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCAIQNA*ATFSAC
Trigger: GCATGCAGAAAAGGTGGCCAAAGCATTCTGGATGGC...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp TGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGGGGAGAACTCTAGGAAGCGTCGCAGCCTaGTCTTTCATTTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: CRCATTQLWHLKQQGRTLGSVAA*SFISFN
Trigger: GTTAAAGGAAATGAAAGACAAGGCTGCGACGCTTCC...TAGAGTTCTCCCCTGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCTGCATGCACTTTTCTTaGCTCATGAGGAAGCGTCGC +
Preference number: 5 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCCMHFS*LMRKRR
Trigger: GCGACGCTTCCTCATGAGCAAAGAAAAGTGCATGCA...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGCCATCCAGAATGCTTaGGCCACCTTTTCTGCATGC +
Preference number: 5 (lower is better)
Translates to: GLSREVSQRQLASLLVKPAIQNA*ATFSAC
Trigger: GCATGCAGAAAAGGTGGCCAAAGCATTCTGGATGGC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCCTCTGTCTCCCCCGATaGCCATCCAGAATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: MTGLSREVSQRQLASLLVLCLPR*PSRMLW
Trigger: CCAAAGCATTCTGGATGGCAATCGGGGGAGACAGAG...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS TCA 90 bp ATGCTATCAACCTGGGCATCTGTTGTGTTAGATGCACCACCCCGATaGTCAGAGAGGGATTCAGTACTATCTGCTGCTGGCAAATGGGGT +
Preference number: 5 (lower is better)
Translates to: MLSTWASVVLDAPPR*SERDSVLSAAGKWG
Trigger: ACCCCATTTGCCAGCAGCAGATAGTACTGAATCCCTCTCTGATCATCGGGGTGGTGCATCTAACACAACAGATGCCCAGGTTGATAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS GCA 90 bp CATGGGATCCACAATGCTATCAACCTGGGCATCTGTTGTGTTAGATaGACCACCCCGATGATCAGAGAGGGATTCAGTACTATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HGIHNAINLGICCVR*TTPMIREGFSTICC
Trigger: GCAGCAGATAGTACTGAATCCCTCTCTGATCATCGGGGTGGTGCATCTAACACAACAGATGCCCAGGTTGATAGCATTGTGGATCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp TCACTTCCCCACCCACCCCTTAGTGCTCCCACTTTGGCAGTGATCTCTCTTTGGTTCTTCATCACTACATaGGACCACACATTGGCATTC +
Preference number: 5 (lower is better)
Translates to: SLPHPPLSAPTLAVISLWFFITT*DHTLAF
Trigger: GAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAA...CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAGGGGTGGGTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp TCACTTCCCCACCCACCCCTTAGTGCTCCCACTTTGGCAGTGATCTCTCTTTGGGAGAAGGCTAAAGCCTaGGTTCCTATCATTCTTCAT +
Preference number: 5 (lower is better)
Translates to: SLPHPPLSAPTLAVISLWEKAKA*VPIILH
Trigger: ATGAAGAATGATAGGAACCAAGGCTTTAGCCTTCTC...CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAGGGGTGGGTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGTGCTGGCAAATGGGGTaGCTCTGGGTGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: NMTGLSREVSQRQLASLLCWQMG*LWVTGI
Trigger: GATCCCTGTCACCCAGAGCAACCCCATTTGCCAGCA...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCAGGTAACCATGCTTTaGCCAGTGGAAGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPQVTML*PVEAMR
Trigger: CCTCATGGCTTCCACTGGCAAAAGCATGGTTACCTG...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACAGGTAACCATGCTTTaGCCAGTGGAAGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: TGLSREVSQRQLASLLVKQVTML*PVEAMR
Trigger: CCTCATGGCTTCCACTGGCAAAAGCATGGTTACCTG...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAATTGGCATTCAGGGCTaGGACAATTCGCTTTACTCC +
Preference number: 5 (lower is better)
Translates to: MCLVLQVCNNTALASQAAIGIQG*DNSLYS
Trigger: GGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAAT...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATGTTCCAGTCAATGAGTaGAGAAGGCTAAAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ERGKCALFCRCATTQLWHVPVNE*RRLKPW
Trigger: CCAAGGCTTTAGCCTTCTCAACTCATTGACTGGAAC...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp TTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTTGCATGCACTTTTCTTaGCTCATGAGGAAGCGTCGC +
Preference number: 5 (lower is better)
Translates to: LQAWKGREELRTLEEKQGCMHFS*LMRKRR
Trigger: GCGACGCTTCCTCATGAGCAAAGAAAAGTGCATGCA...ACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGCTCTGTCTCCCCCGATaGCCATCCAGAATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: QNMTGLSREVSQRQLASLLCLPR*PSRMLW
Trigger: CCAAAGCATTCTGGATGGCAATCGGGGGAGACAGAG...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp AATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCGGCAGTGATCTCTCTTaGGCTTTAAAGAGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: NVPCFAGVQQHSSGISSSGSDLS*ALKRKG
Trigger: CCCCTTTCTCTTTAAAGCCAAAGAGAGATCACTGCC...GCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCCTTAGTGCTCCCACTTaGGCAGTGATCTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: MTGLSREVSQRQLASLLVLSAPT*AVISLW
Trigger: CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAG...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATGAGGAGCTACGAACCTaGGAAGAAAAACAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: ERGKCALFCRCATTQLWHEELRT*EEKQGA
Trigger: AGCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTC...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGCAGGTAACCATGCTTTaGCCAGTGGAAGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: NMTGLSREVSQRQLASLLQVTML*PVEAMR
Trigger: CCTCATGGCTTCCACTGGCAAAAGCATGGTTACCTG...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCATTGGCATTCAGGGCTaGGACAATTCGCTTTACTCC +
Preference number: 5 (lower is better)
Translates to: MTGLSREVSQRQLASLLVIGIQG*DNSLYS
Trigger: GGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAAT...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp TGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCCACACATTGGACCACACATaGGCATTCAGGGCTTGGACA +
Preference number: 5 (lower is better)
Translates to: WPIQGLLKVLSNIQHIPHTLDHT*AFRAWT
Trigger: TGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGT...GTGGGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAATGCATGCACTTTTCTTaGCTCATGAGGAAGCGTCGC +
Preference number: 5 (lower is better)
Translates to: TGLSREVSQRQLASLLVKCMHFS*LMRKRR
Trigger: GCGACGCTTCCTCATGAGCAAAGAAAAGTGCATGCA...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp CAATTTTGGCAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTACTCTGTCTCCCCCGATaGCCATCCAGAATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: QFWQNMTGLSREVSQRQLLCLPR*PSRMLW
Trigger: CCAAAGCATTCTGGATGGCAATCGGGGGAGACAGAG...TAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTGCCAAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp AGGTTACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGCAGTGATCTCTCTTaGGCTTTAAAGAGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RLQAWKGREELRTLEEKQGSDLS*ALKRKG
Trigger: CCCCTTTCTCTTTAAAGCCAAAGAGAGATCACTGCC...TTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGTAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATGCTTAGTGCTCCCACTTaGGCAGTGATCTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: EGCEPYFFLLLTQPVSFMLSAPT*AVISLW
Trigger: CCAAAGAGAGATCACTGCCAAAGTGGGAGCACTAAG...CATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CAA 90 bp ACAGGCTTGGAAGGGCAGAGAGGAGCTACGAACCTTGGAAGAAAAACAAGGTGCAATCTCACAGCATCATaGGAAGTCACTTCCACAATA +
Preference number: 5 (lower is better)
Translates to: TGLEGQRGATNLGRKTRCNLTAS*EVTSTI
Trigger: TATTGTGGAAGTGACTTCCAATGATGCTGTGAGATT...GCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTCTCTGCCCTTCCAAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATATCAAGGCCCGATTTTaGTGTGCTGTCAAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: ERGKCALFCRCATTQLWHIKARF*CAVKVN
Trigger: GTTTACTTTGACAGCACACAAAAATCGGGCCTTGAT...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGATTGGCATTCAGGGCTaGGACAATTCGCTTTACTCC +
Preference number: 5 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRIGIQG*DNSLYS
Trigger: GGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAAT...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGACATTGGACCACACATaGGCATTCAGGGCTTGGACA +
Preference number: 5 (lower is better)
Translates to: NMTGLSREVSQRQLASLLTLDHT*AFRAWT
Trigger: TGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGT...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ACTCTTCCTTTAAAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCAACATTGGACCACACATaGGCATTCAGGGCTTGGACA +
Preference number: 5 (lower is better)
Translates to: TLPLKTCHLLISSSGADPTLDHT*AFRAWT
Trigger: TGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGT...TGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAAAGGAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAGTTCCAGTCAATGAGTaGAGAAGGCTAAAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: TGLSREVSQRQLASLLVKVPVNE*RRLKPW
Trigger: CCAAGGCTTTAGCCTTCTCAACTCATTGACTGGAAC...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATATCCACACTGGCTTTTaGATTCTTTCTAGCATGAGC +
Preference number: 5 (lower is better)
Translates to: ERGKCALFCRCATTQLWHIHTGF*ILSSMS
Trigger: GCTCATGCTAGAAAGAATCAAAAAGCCAGTGTGGAT...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGGAGGAGCTACGAACCTaGGAAGAAAAACAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPREELRT*EEKQGA
Trigger: AGCACCTTGTTTTTCTTCCAAGGTTCGTAGCTCCTC...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS TCA 90 bp AGACAATTCCCATTCTTCCCATCCCCTTGGTCATTTCAGTCTCCCTaGGGTAAACCTTTCCCAATTCTGTTGGAACTTTCTTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: RQFPFFPSPWSFQSP*GKPFPILLELSSPP
Trigger: AGGAGGTGAAGAAAGTTCCAACAGAATTGGGAAAGGTTTACCTCAGGGAGACTGAAATGACCAAGGGGATGGGAAGAATGGGAATTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538028.1
CDS-3UTR CAA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCAGCAGTAACAAGAAATTaGTTTGGCACCACACATAGA +
Preference number: 5 (lower is better)
Translates to: MCLVLQVCNNTALASQAAAVTRN*FGTTHR
Trigger: TCTATGTGTGGTGCCAAACAAATTTCTTGTTACTGC...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCGCAGTAACAAGAAATTaGTTTGGCACCACACATAGA +
Preference number: 5 (lower is better)
Translates to: GLSREVSQRQLASLLVKPAVTRN*FGTTHR
Trigger: TCTATGTGTGGTGCCAAACAAATTTCTTGTTACTGC...GGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp GCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGAAAGGTTTCTTCATCACTACATaGGACCACACATTGGCATTC +
Preference number: 5 (lower is better)
Translates to: AQSYKLLEWRKPKSPRKGFFITT*DHTLAF
Trigger: GAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAA...ACCTTTCCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGGAAGCGTCGCAGCCTaGTCTTTCATTTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: NMTGLSREVSQRQLASLLGSVAA*SFISFN
Trigger: GTTAAAGGAAATGAAAGACAAGGCTGCGACGCTTCC...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATCTCAAGCAGCATTAAAAACTTGCCATTaGCTTATCAGTTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: MCLVLQVCNNTALASQAALKTCH*LISSSG
Trigger: CCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAA...TGCTGCTTGAGATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GAAAGGGGGAAATGTGCCTTGTTTTGCAGGTGTGCAACAACACAGCTCTGGCATTTAAAAACTTGCCATTaGCTTATCAGTTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ERGKCALFCRCATTQLWHLKTCH*LISSSG
Trigger: CCCAGAGGAACTGATAAGCAAATGGCAAGTTTTTAA...ATGCCAGAGCTGTGTTGTTGCACACCTGCAAAACAAGGCACATTTCCCCCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS CCA 90 bp TCATTCTTCATCACTACATTGGACCACACATTGGCATTCAGGGCTTaGACAATTCGCTTTACTCCTGTAGATTCTGGGAAGTCATCATCC +
Preference number: 5 (lower is better)
Translates to: SFFITTLDHTLAFRA*TIRFTPVDSGKSSS
Trigger: GGATGATGACTTCCCAGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS CCA 90 bp ACATTCTTCATCACTACATTGGACCACACATTGGCATTCAGGGCTTaGACAATTCGCTTTACTCCTGTAGATTCTGGGAAGTCATCATCC +
Preference number: 5 (lower is better)
Translates to: TFFITTLDHTLAFRA*TIRFTPVDSGKSSS
Trigger: GGATGATGACTTCCCAGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558725.5
CDS-3UTR CAA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAATCTCACAGCATCATaGGAAGTCACTTCCACAATA +
Preference number: 5 (lower is better)
Translates to: MTGLSREVSQRQLASLLVNLTAS*EVTSTI
Trigger: TATTGTGGAAGTGACTTCCAATGATGCTGTGAGATT...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGGTAAACCACAAATGCTaGGACAGATTCTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRVNHKC*DRFCNL
Trigger: GAGATTGCAGAATCTGTCCAAGCATTTGTGGTTTAC...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAGTAAACCACAAATGCTaGGACAGATTCTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: TGLSREVSQRQLASLLVKVNHKC*DRFCNL
Trigger: GAGATTGCAGAATCTGTCCAAGCATTTGTGGTTTAC...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp CCATGGCCCATACAAGGACTCCTTAAGGTTCTCTCTAACATACAACATATCCCCGTAAACCACAAATGCTaGGACAGATTCTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: PWPIQGLLKVLSNIQHIPVNHKC*DRFCNL
Trigger: GAGATTGCAGAATCTGTCCAAGCATTTGTGGTTTAC...GGGGATATGTTGTATGTTAGAGAGAACCTTAAGGAGTCCTTGTATGGGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCCCATTCTTGAGCTTTTaGTCGGTTTATACCATCTTC +
Preference number: 5 (lower is better)
Translates to: MTGLSREVSQRQLASLLVPFLSF*SVYTIF
Trigger: GAAGATGGTATAAACCGACAAAAAGCTCAAGAATGG...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp GAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATGGAGAAGGCTAAAGCCTaGGTTCCTATCATTCTTCAT +
Preference number: 5 (lower is better)
Translates to: EGCEPYFFLLLTQPVSFMEKAKA*VPIILH
Trigger: ATGAAGAATGATAGGAACCAAGGCTTTAGCCTTCTC...CATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS-3UTR CAA 90 bp ATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATACAAGGACTCGTTCCAGTCAATGAGTaGAGAAGGCTAAAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: MKITVCYHILSPWPIQGLVPVNE*RRLKPW
Trigger: CCAAGGCTTTAGCCTTCTCAACTCATTGACTGGAAC...GAGTCCTTGTATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GAGGGGTGTGAGCCTTATTTCTTTCTGCTCCTAACCCAACCTGTTTCTTTCATGGAGGTTGTCTTCAACTaGAGTAAATCACACAGACCT +
Preference number: 5 (lower is better)
Translates to: EGCEPYFFLLLTQPVSFMEVVFN*SKSHRP
Trigger: AGGTCTGTGTGATTTACTCAAGTTGAAGACAACCTC...CATGAAAGAAACAGGTTGGGTTAGGAGCAGAAAGAAATAAGGCTCACACCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS TCA 90 bp AAATTCTCCACATCTCCTCCTCCAGTGGTAAGACTGGCTAATTCTTaGATATCCAGATCTAACATGGGATCCACAATGCTATCAACCTGG +
Preference number: 5 (lower is better)
Translates to: KFSTSPPPVVRLANS*ISRSNMGSTMLSTW
Trigger: CCAGGTTGATAGCATTGTGGATCCCATGTTAGATCTGGATATTCAAGAATTAGCCAGTCTTACCACTGGAGGAGGAGATGTGGAGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS GCA 90 bp CCAAGGATATCCCAGTCTTCTGGTGCAAGTTTATGCAGTATTTGTTaGAGTTTATATGACAGGTCGATCACTGGAGTAGTATGGACTTGC +
Preference number: 5 (lower is better)
Translates to: PRISQSSGASLCSIC*SLYDRSITGVVWTC
Trigger: GCAAGTCCATACTACTCCAGTGATCGACCTGTCATATAAACTGCAACAAATACTGCATAAACTTGCACCAGAAGACTGGGATATCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560362.1
CDS-3UTR CAA 90 bp AAAACTTGCCATTTGCTTATCAGTTCCTCTGGGGCTGACCCACTCAAACAAGACAATCTCACAGCATCATaGGAAGTCACTTCCACAATA +
Preference number: 5 (lower is better)
Translates to: KTCHLLISSSGADPLKQDNLTAS*EVTSTI
Trigger: TATTGTGGAAGTGACTTCCAATGATGCTGTGAGATT...GTCTTGTTTGAGTGGGTCAGCCCCAGAGGAACTGATAAGCAAATGGCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGATCAAGGCCCGATTTTaGTGTGCTGTCAAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: NMTGLSREVSQRQLASLLIKARF*CAVKVN
Trigger: GTTTACTTTGACAGCACACAAAAATCGGGCCTTGAT...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCATTCTTGAGCTTTTaGTCGGTTTATACCATCTTC +
Preference number: 5 (lower is better)
Translates to: TGLSREVSQRQLASLLVKPFLSF*SVYTIF
Trigger: GAAGATGGTATAAACCGACAAAAAGCTCAAGAATGG...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCTTTGATGCACCATTCTaGAGCTTTTTGTCGGTTTAT +
Preference number: 5 (lower is better)
Translates to: MTGLSREVSQRQLASLLVFDAPF*SFLSVY
Trigger: ATAAACCGACAAAAAGCTCAAGAATGGTGCATCAAA...GACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGTTCTTCATCACTACATaGGACCACACATTGGCATTC +
Preference number: 5 (lower is better)
Translates to: NMTGLSREVSQRQLASLLFFITT*DHTLAF
Trigger: GAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAA...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp CAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGGAGAAGGCTAAAGCCTaGGTTCCTATCATTCTTCAT +
Preference number: 5 (lower is better)
Translates to: QNMTGLSREVSQRQLASLEKAKA*VPIILH
Trigger: ATGAAGAATGATAGGAACCAAGGCTTTAGCCTTCTC...CAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS-3UTR CAA 90 bp ACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAAATGATAAGGGCAATTTaGGCAAAATATGACTGGGCT +
Preference number: 5 (lower is better)
Translates to: TGLSREVSQRQLASLLVKMIRAI*AKYDWA
Trigger: AGCCCAGTCATATTTTGCCAAAATTGCCCTTATCAT...TTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp CAATTTTGGCAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAATCAAGGCCCGATTTTaGTGTGCTGTCAAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: QFWQNMTGLSREVSQRQLIKARF*CAVKVN
Trigger: GTTTACTTTGACAGCACACAAAAATCGGGCCTTGAT...TAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTGCCAAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGTTTGATGCACCATTCTaGAGCTTTTTGTCGGTTTAT +
Preference number: 5 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRFDAPF*SFLSVY
Trigger: ATAAACCGACAAAAAGCTCAAGAATGGTGCATCAAA...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATGGAAGCGTCGCAGCCTaGTCTTTCATTTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHGSVAA*SFISFN
Trigger: GTTAAAGGAAATGAAAGACAAGGCTGCGACGCTTCC...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp CAATTTTGGCAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAATCCACACTGGCTTTTaGATTCTTTCTAGCATGAGC +
Preference number: 5 (lower is better)
Translates to: QFWQNMTGLSREVSQRQLIHTGF*ILSSMS
Trigger: GCTCATGCTAGAAAGAATCAAAAAGCCAGTGTGGAT...TAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTGCCAAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp ATCATAGCTCAGAGCTACAAGCTCCTTGAATGGAGAAAACCCAAATCACCCAGGTCTAAAATAGTGAGCTaGACAGACTCTTCCACTATT +
Preference number: 5 (lower is better)
Translates to: IIAQSYKLLEWRKPKSPRSKIVS*TDSSTI
Trigger: AATAGTGGAAGAGTCTGTCAAGCTCACTATTTTAGA...CCTGGGTGATTTGGGTTTTCTCCATTCAAGGAGCTTGTAGCTCTGAGCTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261880.10
CDS GCA 90 bp AGATCTTCTGTTCCAAGGATATCCCAGTCTTCTGGTGCAAGTTTATaGAGTATTTGTTGCAGTTTATATGACAGGTCGATCACTGGAGTA +
Preference number: 5 (lower is better)
Translates to: RSSVPRISQSSGASL*SICCSLYDRSITGV
Trigger: TACTCCAGTGATCGACCTGTCATATAAACTGCAACAAATACTGCATAAACTTGCACCAGAAGACTGGGATATCCTTGGAACAGAAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560362.1
CDS CCA 90 bp ATGCTATGGTTTGTTCCAGTCAATGAGTTGAGAAGGCTAAAGCCTTaGTTCCTATTGTGTGAATATGAGCATGTTACTCTTCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: MLWFVPVNELRRLKP*FLLCEYEHVTLPLW
Trigger: CCAAAGAGGAAGAGTAACATGCTCATATTCACACAATAGGAACCAAGGCTTTAGCCTTCTCAACTCATTGACTGGAACAAACCATAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538028.1
CDS-3UTR CAA 90 bp CAATTTTGGCAAAATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTACCATTCTTGAGCTTTTaGTCGGTTTATACCATCTTC +
Preference number: 5 (lower is better)
Translates to: QFWQNMTGLSREVSQRQLPFLSF*SVYTIF
Trigger: GAAGATGGTATAAACCGACAAAAAGCTCAAGAATGG...TAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATTTTGCCAAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS-3UTR CAA 90 bp AATATGACTGGGCTGAGTAGAGAGGTATCTCAGAGACAGCTAGCATCTTTGTTGTTTGATGCACCATTCTaGAGCTTTTTGTCGGTTTAT +
Preference number: 5 (lower is better)
Translates to: NMTGLSREVSQRQLASLLFDAPF*SFLSVY
Trigger: ATAAACCGACAAAAAGCTCAAGAATGGTGCATCAAA...CAACAAAGATGCTAGCTGTCTCTGAGATACCTCTCTACTCAGCCCAGTCATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS TCA 90 bp GGTATCTCAGAGACAGCTAGCATCTTTGTTGGTCAAACCCTAGTATaGATAATTCAGTGCTCTTCATCAGATGAAAGGCCTTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: GISETASIFVGQTLV*IIQCSSSDERPSIS
Trigger: TGAAATTGAAGGCCTTTCATCTGATGAAGAGCACTGAATTATTCATACTAGGGTTTGACCAACAAAGATGCTAGCTGTCTCTGAGATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS GCA 90 bp ACTATCAAGGCCCGATTTTTGTGTGCTGTCAAAGTAAACCACAAATaGTTGGACAGATTCTGCAATCTCTGCAGTAACAAGAAATTTGTT +
Preference number: 5 (lower is better)
Translates to: TIKARFLCAVKVNHK*LDRFCNLCSNKKFV
Trigger: AACAAATTTCTTGTTACTGCAGAGATTGCAGAATCTGTCCAAGCATTTGTGGTTTACTTTGACAGCACACAAAAATCGGGCCTTGATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000558725.5
ENST00000560362.1
ENST00000561452.5
CDS-3UTR CAA 90 bp GAATTTCTTCATGAAAATCACGGTATGTTATCACATACTGTCTCCATGGCCCATATGATAAGGGCAATTTaGGCAAAATATGACTGGGCT +
Preference number: 5 (lower is better)
Translates to: EFLHENHGMLSHTVSMAHMIRAI*AKYDWA
Trigger: AGCCCAGTCATATTTTGCCAAAATTGCCCTTATCAT...ATGGGCCATGGAGACAGTATGTGATAACATACCGTGATTTTCATGAAGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261880.10
ENST00000561452.5
CDS TCA 72 bp GCCCAGAGAGGCCGTGGTGCTGGGTCCGTCGCCCGCTaGGGCTCAGGGGCCTTGGAGGTCGGCCCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: AQRGRGAGSVAR*GSGALEVGPGA
Trigger: GGCGCCTGGGCCGACCTCCAAGGCCCCTGAGCCTCAGCGGGCGACGGACCCAGCACCACGGCCTCTCTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS CCA 72 bp CAGGGCCCGCTGCGGGGACAAGGCCCAGAGAGGCCGTaGTGCTGGGTCCGTCGCCCGCTGAGGCTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: QGPLRGQGPERP*CWVRRPLRLRG
Trigger: GCCCCTGAGCCTCAGCGGGCGACGGACCCAGCACCACGGCCTCTCTGGGCCTTGTCCCCGCAGCGGGCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS GCA 72 bp GGCCCGCTGCGGGGACAAGGCCCAGAGAGGCCGTGGTaGTGGGTCCGTCGCCCGCTGAGGCTCAGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: GPLRGQGPERPW*WVRRPLRLRGL
Trigger: AAGGCCCCTGAGCCTCAGCGGGCGACGGACCCAGCACCACGGCCTCTCTGGGCCTTGTCCCCGCAGCGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS CCA 72 bp CAAGGATATCTGGGGAGACTGGGCGCCTCCACTGACTaGAGGAAGAACGCAGGGCCCGCTGCGGGGACAAGG +
Preference number: 6 (lower is better)
Translates to: QGYLGRLGASTD*RKNAGPAAGTR
Trigger: CCTTGTCCCCGCAGCGGGCCCTGCGTTCTTCCTCCAGTCAGTGGAGGCGCCCAGTCTCCCCAGATATCCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561452.5
CDS CCA 72 bp CCTTGGAGGTCGGCCCAGGCGCCTATCTACTCACGTTaGACCAGCTGGTCTCCTGAGAAGACGGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: PWRSAQAPIYSR*TSWSPEKTEEQ
Trigger: CTGCTCCTCCGTCTTCTCAGGAGACCAGCTGGTCCAACGTGAGTAGATAGGCGCCTGGGCCGACCTCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS CCA 72 bp TCGGCCCAGGCGCCTATCTACTCACGTTGGACCAGCTaGTCTCCTGAGAAGACGGAGGAGCAGCTGGTGACT +
Preference number: 6 (lower is better)
Translates to: SAQAPIYSRWTS*SPEKTEEQLVT
Trigger: AGTCACCAGCTGCTCCTCCGTCTTCTCAGGAGACCAGCTGGTCCAACGTGAGTAGATAGGCGCCTGGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561229.1
ENST00000561452.5
CDS TCA 72 bp TCTCAACGGATCCTCGCAAAAACCTGTGGCCTGGGCTaGGCAGAGCGGGAAATCAGTCTCACTTTACACAGG +
Preference number: 6 (lower is better)
Translates to: SQRILAKTCGLG*AEREISLTLHR
Trigger: CCTGTGTAAAGTGAGACTGATTTCCCGCTCTGCTCAGCCCAGGCCACAGGTTTTTGCGAGGATCCGTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561229.1
CDS CCA 72 bp TTCAGGTTCATCTCAACGGATCCTCGCAAAAACCTGTaGCCTGGGCTGAGCAGAGCGGGAAATCAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: FRFISTDPRKNL*PGLSRAGNQSH
Trigger: GTGAGACTGATTTCCCGCTCTGCTCAGCCCAGGCCACAGGTTTTTGCGAGGATCCGTTGAGATGAACCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561229.1
CDS TCA 72 bp ACCTGGGCATCTGTTGTGTTAGATGCACCACCCCGATaGTCAGAGAGGGATTCAGTACTATCTGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: TWASVVLDAPPR*SERDSVLSAAG
Trigger: GCCAGCAGCAGATAGTACTGAATCCCTCTCTGATCATCGGGGTGGTGCATCTAACACAACAGATGCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS CAA 72 bp CGCAGACCAAGATCATCACCTCAGGTAACCATGCTTTaGCCAGTGGAAGCCATGAGGAGACACTATCAAGGC +
Preference number: 6 (lower is better)
Translates to: RRPRSSPQVTML*PVEAMRRHYQG
Trigger: GCCTTGATAGTGTCTCCTCATGGCTTCCACTGGCAAAAGCATGGTTACCTGAGGTGATGATCTTGGTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000558725.5
ENST00000560362.1
ENST00000561452.5
CDS GCA 72 bp CACAATGCTATCAACCTGGGCATCTGTTGTGTTAGATaGACCACCCCGATGATCAGAGAGGGATTCAGTACT +
Preference number: 6 (lower is better)
Translates to: HNAINLGICCVR*TTPMIREGFST
Trigger: AGTACTGAATCCCTCTCTGATCATCGGGGTGGTGCATCTAACACAACAGATGCCCAGGTTGATAGCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS CAA 90 bp ACACTCTATCGCAGACCAAGATCATCACCTCAGGTAACCATGCTTTaGCCAGTGGAAGCCATGAGGAGACACTATCAAGGCCCGATTTTT +
Preference number: 6 (lower is better)
Translates to: TLYRRPRSSPQVTML*PVEAMRRHYQGPIF
Trigger: AAAAATCGGGCCTTGATAGTGTCTCCTCATGGCTTCCACTGGCAAAAGCATGGTTACCTGAGGTGATGATCTTGGTCTGCGATAGAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000558725.5
ENST00000560362.1
ENST00000561452.5
CDS CAA 72 bp GAATGCTTTGGCCACCTTTTCTGCATGCACTTTTCTTaGCTCATGAGGAAGCGTCGCAGCCTTGTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: ECFGHLFCMHFS*LMRKRRSLVFH
Trigger: ATGAAAGACAAGGCTGCGACGCTTCCTCATGAGCAAAGAAAAGTGCATGCAGAAAAGGTGGCCAAAGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS CCA 72 bp ATCACTACATTGGACCACACATTGGCATTCAGGGCTTaGACAATTCGCTTTACTCCTGTAGATTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: ITTLDHTLAFRA*TIRFTPVDSGK
Trigger: CTTCCCAGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000558725.5
ENST00000561452.5
CDS CAA 72 bp CATCACTACATTGGACCACACATTGGCATTCAGGGCTaGGACAATTCGCTTTACTCCTGTAGATTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: HHYIGPHIGIQG*DNSLYSCRFWE
Trigger: TTCCCAGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000558725.5
ENST00000561452.5
CDS CCA 72 bp TCCTATCATTCTTCATCACTACATTGGACCACACATTaGCATTCAGGGCTTGGACAATTCGCTTTACTCCTG +
Preference number: 6 (lower is better)
Translates to: SYHSSSLHWTTH*HSGLGQFALLL
Trigger: CAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS CAA 90 bp ATCATTCTTCATCACTACATTGGACCACACATTGGCATTCAGGGCTaGGACAATTCGCTTTACTCCTGTAGATTCTGGGAAGTCATCATC +
Preference number: 6 (lower is better)
Translates to: IILHHYIGPHIGIQG*DNSLYSCRFWEVII
Trigger: GATGATGACTTCCCAGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS CAA 90 bp AAGCCTTGGTTCCTATCATTCTTCATCACTACATTGGACCACACATaGGCATTCAGGGCTTGGACAATTCGCTTTACTCCTGTAGATTCT +
Preference number: 6 (lower is better)
Translates to: KPWFLSFFITTLDHT*AFRAWTIRFTPVDS
Trigger: AGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGATAGGAACCAAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS CAA 90 bp AACATTCTTCATCACTACATTGGACCACACATTGGCATTCAGGGCTaGGACAATTCGCTTTACTCCTGTAGATTCTGGGAAGTCATCATC +
Preference number: 6 (lower is better)
Translates to: NILHHYIGPHIGIQG*DNSLYSCRFWEVII
Trigger: GATGATGACTTCCCAGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558725.5
CDS CCA 72 bp AAGAAACATTCTTCATCACTACATTGGACCACACATTaGCATTCAGGGCTTGGACAATTCGCTTTACTCCTG +
Preference number: 6 (lower is better)
Translates to: KKHSSSLHWTTH*HSGLGQFALLL
Trigger: CAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558725.5
CDS CAA 72 bp TTCCTATCATTCTTCATCACTACATTGGACCACACATaGGCATTCAGGGCTTGGACAATTCGCTTTACTCCT +
Preference number: 6 (lower is better)
Translates to: FLSFFITTLDHT*AFRAWTIRFTP
Trigger: AGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGATAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS CAA 72 bp CTAAAGCCTTGGTTCCTATCATTCTTCATCACTACATaGGACCACACATTGGCATTCAGGGCTTGGACAATT +
Preference number: 6 (lower is better)
Translates to: LKPWFLSFFITT*DHTLAFRAWTI
Trigger: AATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGATAGGAACCAAGGCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000561452.5
CDS CAA 72 bp CAAGAAACATTCTTCATCACTACATTGGACCACACATaGGCATTCAGGGCTTGGACAATTCGCTTTACTCCT +
Preference number: 6 (lower is better)
Translates to: QETFFITTLDHT*AFRAWTIRFTP
Trigger: AGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGTTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558725.5
CDS TCA 72 bp GAGACAGCTAGCATCTTTGTTGGTCAAACCCTAGTATaGATAATTCAGTGCTCTTCATCAGATGAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: ETASIFVGQTLV*IIQCSSSDERP
Trigger: AGGCCTTTCATCTGATGAAGAGCACTGAATTATTCATACTAGGGTTTGACCAACAAAGATGCTAGCTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261880.10
ENST00000538028.1
ENST00000542650.5
ENST00000561452.5
CDS TCA 72 bp TGGTGCAAGTTTATGCAGTATTTGTTGCAGTTTATATaGCAGGTCGATCACTGGAGTAGTATGGACTTGCTG +
Preference number: 6 (lower is better)
Translates to: WCKFMQYLLQFI*QVDHWSSMDLL
Trigger: CAGCAAGTCCATACTACTCCAGTGATCGACCTGTCATATAAACTGCAACAAATACTGCATAAACTTGCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560362.1
CDS GCA 72 bp GTTCCAAGGATATCCCAGTCTTCTGGTGCAAGTTTATaGAGTATTTGTTGCAGTTTATATGACAGGTCGATC +
Preference number: 6 (lower is better)
Translates to: VPRISQSSGASL*SICCSLYDRSI
Trigger: GATCGACCTGTCATATAAACTGCAACAAATACTGCATAAACTTGCACCAGAAGACTGGGATATCCTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560362.1
CDS CAA 72 bp GTCAATGAGTTGAGAAGGCTAAAGCCTTGGTTCCTATaGTGTGAATATGAGCATGTTACTCTTCCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: VNELRRLKPWFL*CEYEHVTLPLW
Trigger: CCAAAGAGGAAGAGTAACATGCTCATATTCACACAATAGGAACCAAGGCTTTAGCCTTCTCAACTCATTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538028.1
CDS CAA 90 bp TTTGTTCCAGTCAATGAGTTGAGAAGGCTAAAGCCTTGGTTCCTATaGTGTGAATATGAGCATGTTACTCTTCCTCTTTGGGTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: FVPVNELRRLKPWFL*CEYEHVTLPLWVLF
Trigger: AAACAGGACCCAAAGAGGAAGAGTAACATGCTCATATTCACACAATAGGAACCAAGGCTTTAGCCTTCTCAACTCATTGACTGGAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538028.1
CDS CAA 90 bp ATCAATGTCCAAGAAACATTCTTCATCACTACATTGGACCACACATaGGCATTCAGGGCTTGGACAATTCGCTTTACTCCTGTAGATTCT +
Preference number: 6 (lower is better)
Translates to: INVQETFFITTLDHT*AFRAWTIRFTPVDS
Trigger: AGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGTGGTCCAATGTAGTGATGAAGAATGTTTCTTGGACATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558725.5
CDS GCA 72 bp GCTGTCAAAGTAAACCACAAATGCTTGGACAGATTCTaGAATCTCTGCAGTAACAAGAAATTTGTTTGGCAC +
Preference number: 6 (lower is better)
Translates to: AVKVNHKCLDRF*NLCSNKKFVWH
Trigger: GTGCCAAACAAATTTCTTGTTACTGCAGAGATTGCAGAATCTGTCCAAGCATTTGTGGTTTACTTTGACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000558725.5
ENST00000560362.1
ENST00000561452.5
CDS CCA 72 bp AATTCCCATATAGATAACACATCCAATTTATCTGGGTaGAGGGCAGGAAGGAATGCAATTCATCTCTTACGT +
Preference number: 6 (lower is better)
Translates to: NSHIDNTSNLSG*RAGRNAIHLLR
Trigger: ACGTAAGAGATGAATTGCATTCCTTCCTGCCCTCCACCCAGATAAATTGGATGTGTTATCTATATGGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558725.5
CDS CCA 72 bp TTTGTTCCAGTCAATGAGTTGAGAAGGCTAAAGCCTTaGTTCCTATTGTGTGAATATGAGCATGTTACTCTT +
Preference number: 6 (lower is better)
Translates to: FVPVNELRRLKP*FLLCEYEHVTL
Trigger: AAGAGTAACATGCTCATATTCACACAATAGGAACCAAGGCTTTAGCCTTCTCAACTCATTGACTGGAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538028.1
CDS CAA 72 bp TTCTACCAATTCAAAGCCATGTTTGATGCACCATTCTaGAGCTTTTTGTCGGTTTATACCATCTTCAGACAC +
Preference number: 6 (lower is better)
Translates to: FYQFKAMFDAPF*SFLSVYTIFRH
Trigger: GTGTCTGAAGATGGTATAAACCGACAAAAAGCTCAAGAATGGTGCATCAAACATGGCTTTGAATTGGTAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261880.10
ENST00000542650.5
ENST00000558725.5
ENST00000560362.1
ENST00000561452.5
CDS CAA 90 bp CACCCTGTAATACAGATTCCAGCTAAATCTCTTCTCAGCTCTGGTTaGTCCACACTTATTTATTATATTAGACAATTCCCATTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: HPVIQIPAKSLLSSG*STLIYYIRQFPFFP
Trigger: TGGGAAGAATGGGAATTGTCTAATATAATAAATAAGTGTGGACAAACCAGAGCTGAGAAGAGATTTAGCTGGAATCTGTATTACAGGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538028.1
CDS CAA 72 bp ATACAGATTCCAGCTAAATCTCTTCTCAGCTCTGGTTaGTCCACACTTATTTATTATATTAGACAATTCCCA +
Preference number: 6 (lower is better)
Translates to: IQIPAKSLLSSG*STLIYYIRQFP
Trigger: TGGGAATTGTCTAATATAATAAATAAGTGTGGACAAACCAGAGCTGAGAAGAGATTTAGCTGGAATCTGTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538028.1