RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AACS (Homo sapiens)

Ensembl gene IDs: ENSG00000081760

Ensembl transcript IDs: ENST00000316519.11, ENST00000316543.14, ENST00000418937.6, ENST00000441247.6, ENST00000536118.5, ENST00000537477.5, ENST00000537564.5, ENST00000538851.5, ENST00000543665.2, ENST00000545511.5

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTAGCAACTCTCAGGTGGAGGCAGCACAGGGATGCGGTTCCTGGTaGGGAGGGTCCTCACTCGGTGACCACACTGCCTGGGCTCACAGC +
Preference number: 1 (lower is better)
Translates to: PSNSQVEAAQGCGSW*GGSSLGDHTAWAHS
Trigger: GCTGTGAGCCCAGGCAGTGTGGTCACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCTGAGAGTTGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR GCA 90 bp GGAGGCACGCTCTGGTTGACGGGTGACGCACAGTCCTCCAGGGCCTaGATTGCATCCATGACACAGACACACGTGAACACCCAGCCCGCC +
Preference number: 1 (lower is better)
Translates to: GGTLWLTGDAQSSRA*IASMTQTHVNTQPA
Trigger: GGCGGGCTGGGTGTTCACGTGTGTCTGTGTCATGGATGCAATGCAGGCCCTGGAGGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 90 bp CCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATaGCACCAATGCTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCT +
Preference number: 1 (lower is better)
Translates to: PAHHSHRSPGTWSSR*HQCLPQPASPRQRA
Trigger: AGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR TCA 90 bp TTCCTTGGAGGGAAGCTGGCCCGGAGGCACGCTCTGGTTGACGGGTaGCGCACAGTCCTCCAGGGCCTGCATTGCATCCATGACACAGAC +
Preference number: 1 (lower is better)
Translates to: FLGGKLARRHALVDG*RTVLQGLHCIHDTD
Trigger: GTCTGTGTCATGGATGCAATGCAGGCCCTGGAGGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR GCA 90 bp CATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATaGTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTGG +
Preference number: 1 (lower is better)
Translates to: HSHRSPGTWSSRWHQ*LPQPASPRQRAHCW
Trigger: CCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR CCA 90 bp AAATCCACTCATTCCTTGGAGGGAAGCTGGCCCGGAGGCACGCTCTaGTTGACGGGTGACGCACAGTCCTCCAGGGCCTGCATTGCATCC +
Preference number: 1 (lower is better)
Translates to: KSTHSLEGSWPGGTL*LTGDAQSSRACIAS
Trigger: GGATGCAATGCAGGCCCTGGAGGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 90 bp GAGAAAACCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTaGAGCTCCAGATGGCACCAATGCTTGCCGCAGCCAGCATCGCCT +
Preference number: 1 (lower is better)
Translates to: EKTGPAHHSHRSPGT*SSRWHQCLPQPASP
Trigger: AGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGGTTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR GCA 90 bp AGGAGTGTGTCTGTCTTCAGCACCAGCCAGCCCCACCGTTCCCGCTaGACTGTGTGTGCAAAGACACACACTCTCACCACAGTGCCACAC +
Preference number: 1 (lower is better)
Translates to: RSVSVFSTSQPHRSR*TVCAKTHTLTTVPH
Trigger: GTGTGGCACTGTGGTGAGAGTGTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAAGACAGACACACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 90 bp ACACTCTCACCACAGTGCCACACCTGCGGCCCAGACACTCCCTCCTaGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTA +
Preference number: 1 (lower is better)
Translates to: TLSPQCHTCGPDTPS*SLKARIPLVWKIQV
Trigger: TACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGGAGTGTCTGGGCCGCAGGTGTGGCACTGTGGTGAGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 90 bp ATAAAGAGATCCTGTATGAAATCCACTCATTCCTTGGAGGGAAGCTaGCCCGGAGGCACGCTCTGGTTGACGGGTGACGCACAGTCCTCC +
Preference number: 1 (lower is better)
Translates to: IKRSCMKSTHSLEGS*PGGTLWLTGDAQSS
Trigger: GGAGGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 90 bp GAGATGGGAAGGGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATaGGACAACGGGACGGGGAGGTTGAAGACAAGACCTTGGCTCAGG +
Preference number: 1 (lower is better)
Translates to: EMGREERDLHLHRAK*DNGTGRLKTRPWLR
Trigger: CCTGAGCCAAGGTCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCCCTTCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR TCA 90 bp ATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTaGAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCA +
Preference number: 1 (lower is better)
Translates to: ICTFTEQNGTTGRGG*RQDLGSGVCLSSAP
Trigger: TGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 90 bp CCAGACACTCCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTaGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGA +
Preference number: 1 (lower is better)
Translates to: PDTPSWSLKARIPLV*KIQVPTRFNKTEKR
Trigger: TCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGGAGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR TCA 90 bp GGTTGTGCTCTTTGCCATTATAGACAACAGCCTCCACAGAGAAGATaGGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCATTCA +
Preference number: 1 (lower is better)
Translates to: GCALCHYRQQPPQRR*ALAEFEKTGPAHHS
Trigger: TGAATGGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGGCTGTTGTCTATAATGGCAAAGAGCACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR CCA 90 bp CCAGAAACACACTGTTTGGAATCTTTGAAAGGTCTATGTTCTCTCTaGAGGACACATAAGGAATCACCACCACTTTCTTCAAGTCTGGTA +
Preference number: 1 (lower is better)
Translates to: PETHCLESLKGLCSL*RTHKESPPLSSSLV
Trigger: TACCAGACTTGAAGAAAGTGGTGGTGATTCCTTATGTGTCCTCCAGAGAGAACATAGACCTTTCAAAGATTCCAAACAGTGTGTTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR TCA 90 bp ATAAAAATGGACATCAGATTAGAGATACAAGTTCATACGCTGAACTaGATTGTACATACCAACTGCCTGGCTATGGAAACCCGTGACTTG +
Preference number: 1 (lower is better)
Translates to: IKMDIRLEIQVHTLN*IVHTNCLAMETRDL
Trigger: CAAGTCACGGGTTTCCATAGCCAGGCAGTTGGTATGTACAATTCAGTTCAGCGTATGAACTTGTATCTCTAATCTGATGTCCATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR CCA 90 bp TCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTCACCCCGGAGGCACGCTCTaGTTGACGGGTGACGCACAG +
Preference number: 2 (lower is better)
Translates to: SQLEGSPMRDTGGHPLLHPGGTL*LTGDAQ
Trigger: CTGTGCGTCACCCGTCAACCAGAGCGTGCCTCCGGG...GTGAAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CAA 90 bp TCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTaGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTGGGTA +
Preference number: 2 (lower is better)
Translates to: SHRSPGTWSSRWHQC*PQPASPRQRAHCWV
Trigger: TACCCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR-3UTR TCA 90 bp AGGTGGAGGCAGCACAGGGATGCGGTTCCTGGTGAGGAGGGTCCTCACTCGGTGACGGGACGGGGAGGTTaGAGACAAGACCTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: RWRQHRDAVPGEEGPHSVTGRGG*RQDLGS
Trigger: TGAGCCAAGGTCTTGTCTTCAACCTCCCCGTCCCGT...CACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR TCA 90 bp AGGTGGAGGCAGCACAGGGATGCGGTTCCTGGTGAGGAGGGTCCTCACTCGGTGCCTAGCAGCCAGCTGTaGAAGCTGTGTCAAGTCACG +
Preference number: 2 (lower is better)
Translates to: RWRQHRDAVPGEEGPHSVPSSQL*KLCQVT
Trigger: CGTGACTTGACACAGCTTTCACAGCTGGCTGCTAGG...CACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR TCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGCACACGGGTGCGGCTaGGTGACACGCCAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGEAHGCG*VTRQPV
Trigger: GACTGGCTGGCGTGTCACTCAGCCGCACCCGTGTGC...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR TCA 90 bp AATAAAGAGATCCTGTATGAAATCCACTCATTCCTTGGAGGGAAGCTGGCCCGGACGGGTGCGGCTGAGTaGCACGCCAGCCAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: NKEILYEIHSFLGGKLARTGAAE*HASQSD
Trigger: GTCAGACTGGCTGGCGTGTCACTCAGCCGCACCCGT...CCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR GCA 90 bp TGGCACCAATGCTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTGGACCCATTTTCCTCATTaGTGCTGCAAACAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: WHQCLPQPASPRQRAHCWTHFPH*CCKQSH
Trigger: GTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGT...CCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR CAA 90 bp TCAGTCTGTGCAATAAAGAGATCCTGTATGAAATCCACTCATTCCTaGGAGGGAAGCTGGCCCGGAGGCACGCTCTGGTTGACGGGTGAC +
Preference number: 2 (lower is better)
Translates to: SVCAIKRSCMKSTHS*EGSWPGGTLWLTGD
Trigger: GTCACCCGTCAACCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTATTGCACAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR CCA 90 bp AATAAAGAGATCCTGTATGAAATCCACTCATTCCTTGGAGGGAAGCTGGCCCGGAGCTCAAAGGCATACTaGACCCTGAGGGAAAACAGG +
Preference number: 2 (lower is better)
Translates to: NKEILYEIHSFLGGKLARSSKAY*TLRENR
Trigger: CCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCT...CCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR GCA 90 bp CCACTCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGAACACAAAAGTTACAGTaGACACGGGTGCGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: PLVWKIQVPTRFNKTEKRTQKLQ*TRVRLS
Trigger: ACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGT...TCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR GCA 90 bp CTAAAGCTCAAAGGCATACTGGACCCTGAGGGAAAACAGGAGAGCCTGAGATGGCTACAGAACACTTGGTaGGAGCATCCTTTTACAACA +
Preference number: 2 (lower is better)
Translates to: LKLKGILDPEGKQESLRWLQNTW*EHPFTT
Trigger: TGTTGTAAAAGGATGCTCGCACCAAGTGTTCTGTAG...CCATCTCAGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR GCA 90 bp CTCCACAGAGAAGATGAGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCCATTTTCCTCATTGCTaGTGCAAACAAAGCCACTTC +
Preference number: 2 (lower is better)
Translates to: LHREDELWLNLRKPVQHTHFPHC*CKQSHF
Trigger: GAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATG...GGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR-3UTR CCA 90 bp GCCTTTAACCACCTGCTGCAGCTTTTCCATGTGGTTGTGCTCTTTGCCATTATACAGCGTGCTCACTGTTaGGTAAATAACCAACAACCC +
Preference number: 2 (lower is better)
Translates to: AFNHLLQLFHVVVLFAIIQRAHC*VNNQQP
Trigger: GGGTTGTTGGTTATTTACCCAACAGTGAGCACGCTG...TATAATGGCAAAGAGCACAACCACATGGAAAAGCTGCAGCAGGTGGTTAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR CAA 90 bp AATAACCAACAACCCGATCTCCTTTCTTCACACCCATTTTCCTCATaGCTGCTGCAAACAAAGCCACTTCTTGCCTCAGCTCTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: NNQQPDLLSSHPFSS*LLQTKPLLASALQK
Trigger: CTTTTGAAGAGCTGAGGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGTGAAGAAAGGAGATCGGGTTGTTGGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR-3UTR TCA 90 bp GAAACACACTGTTTGGAATCTTTGAAAGGTCTATGTTCTCTCTGGAGGACACATCCTCCACAGAGAAGATaGGCTTTGGCTGAATTTGAG +
Preference number: 2 (lower is better)
Translates to: ETHCLESLKGLCSLWRTHPPQRR*ALAEFE
Trigger: CTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGG...ATGTGTCCTCCAGAGAGAACATAGACCTTTCAAAGATTCCAAACAGTGTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR-3UTR GCA 90 bp CACTGTTGGGTAAATAACCAACAACCCGATCTCCTTTCTTCACACCCATTTTCCAACAAAGCCACTTCTTaGCTCAGCTCTTCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: HCWVNNQQPDLLSSHPFSNKATS*LSSSKV
Trigger: GACTTTTGAAGAGCTGAGGCAAGAAGTGGCTTTGTT...GGAAAATGGGTGTGAAGAAAGGAGATCGGGTTGTTGGTTATTTACCCAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR CCA 72 bp CATTCCTTGGAGGGAAGCTGGCCCGGAGGCACGCTCTaGTTGACGGGTGACGCACAGTCCTCCAGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: HSLEGSWPGGTL*LTGDAQSSRAC
Trigger: GCAGGCCCTGGAGGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR TCA 72 bp GGGAAGCTGGCCCGGAGGCACGCTCTGGTTGACGGGTaGCGCACAGTCCTCCAGGGCCTGCATTGCATCCAT +
Preference number: 3 (lower is better)
Translates to: GKLARRHALVDG*RTVLQGLHCIH
Trigger: ATGGATGCAATGCAGGCCCTGGAGGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCCGGGCCAGCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR GCA 72 bp GTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTTaGCGCAGCCAGCATCGCCTCGACAGCGTGCTCACT +
Preference number: 3 (lower is better)
Translates to: VRGRGAPDGTNA*RSQHRLDSVLT
Trigger: AGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR GCA 72 bp CGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATaGTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCT +
Preference number: 3 (lower is better)
Translates to: RSPGTWSSRWHQ*LPQPASPRQRA
Trigger: AGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR-3UTR CAA 90 bp TCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTCACGGAGGCACGCTCTGGTaGACGGGTGACGCACAGTCC +
Preference number: 3 (lower is better)
Translates to: SQLEGSPMRDTGGHPLLHGGTLW*TGDAQS
Trigger: GGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCC...GTGAAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 72 bp CCACAGTGCCACACCTGCGGCCCAGACACTCCCTCCTaGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: PQCHTCGPDTPS*SLKARIPLVWK
Trigger: CTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGGAGTGTCTGGGCCGCAGGTGTGGCACTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 72 bp CATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATaGCACCAATGCTTGCCGCAGCCAGCATCGCCTCGA +
Preference number: 3 (lower is better)
Translates to: HSHRSPGTWSSR*HQCLPQPASPR
Trigger: TCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR CCA 72 bp GGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTaGAGCTCCAGATGGCACCAATGCTTGCCGCAGCCA +
Preference number: 3 (lower is better)
Translates to: GPAHHSHRSPGT*SSRWHQCLPQP
Trigger: TGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR-3UTR CAA 90 bp GGCTCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTGTTGAAGACAAGACCTaGGCTCAGGAGTGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: GSQLEGSPMRDTGGHPLLVEDKT*AQECVC
Trigger: ACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAAC...AAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 72 bp TCCTGTATGAAATCCACTCATTCCTTGGAGGGAAGCTaGCCCGGAGGCACGCTCTGGTTGACGGGTGACGCA +
Preference number: 3 (lower is better)
Translates to: SCMKSTHSLEGS*PGGTLWLTGDA
Trigger: TGCGTCACCCGTCAACCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 72 bp CATGATCTCGACAAGAACCCCCTAGCAACTCTCAGGTaGAGGCAGCACAGGGATGCGGTTCCTGGTGAGGAG +
Preference number: 3 (lower is better)
Translates to: HDLDKNPLATLR*RQHRDAVPGEE
Trigger: CTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCTGAGAGTTGCTAGGGGGTTCTTGTCGAGATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR CAA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGAAGCCTACAGAACACTaGGTGCGAGCATCCTTTTAC +
Preference number: 3 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQKPTEH*VRASFY
Trigger: GTAAAAGGATGCTCGCACCAAGTGTTCTGTAGGCTT...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR-3UTR CAA 90 bp CTGCAGCTTTTCCATGTGGTTGTGCTCTTTGCCATTATAGACAACAGCCTCCACGAGCTTTGGCTGAATTaGAGAAAACCGGTCCAGCAC +
Preference number: 3 (lower is better)
Translates to: LQLFHVVVLFAIIDNSLHELWLN*RKPVQH
Trigger: GTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTC...GTGGAGGCTGTTGTCTATAATGGCAAAGAGCACAACCACATGGAAAAGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR TCA 72 bp TACATACCAACTGCCTGGCTATGGAAACCCGTGACTTaGCTTAGGGGTGCTGATGACATGATCTCGACAAGA +
Preference number: 3 (lower is better)
Translates to: YIPTAWLWKPVT*LRGADDMISTR
Trigger: TCTTGTCGAGATCATGTCATCAGCACCCCTAAGTCAAGTCACGGGTTTCCATAGCCAGGCAGTTGGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR TCA 72 bp CTTTGCCATTATAGACAACAGCCTCCACAGAGAAGATaGGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCA +
Preference number: 3 (lower is better)
Translates to: LCHYRQQPPQRR*ALAEFEKTGPA
Trigger: TGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGGCTGTTGTCTATAATGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR GCA 72 bp ACTTTCTTCAAGTCTGGTAGGCCTTTAACCACCTGCTaGAGCTTTTCCATGTGGTTGTGCTCTTTGCCATTA +
Preference number: 3 (lower is better)
Translates to: TFFKSGRPLTTC*SFSMWLCSLPL
Trigger: TAATGGCAAAGAGCACAACCACATGGAAAAGCTGCAGCAGGTGGTTAAAGGCCTACCAGACTTGAAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR TCA 72 bp GACATCAGATTAGAGATACAAGTTCATACGCTGAACTaGATTGTACATACCAACTGCCTGGCTATGGAAACC +
Preference number: 3 (lower is better)
Translates to: DIRLEIQVHTLN*IVHTNCLAMET
Trigger: GGTTTCCATAGCCAGGCAGTTGGTATGTACAATTCAGTTCAGCGTATGAACTTGTATCTCTAATCTGATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CCA 72 bp CACTGTTTGGAATCTTTGAAAGGTCTATGTTCTCTCTaGAGGACACATAAGGAATCACCACCACTTTCTTCA +
Preference number: 3 (lower is better)
Translates to: HCLESLKGLCSL*RTHKESPPLSS
Trigger: TGAAGAAAGTGGTGGTGATTCCTTATGTGTCCTCCAGAGAGAACATAGACCTTTCAAAGATTCCAAACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACCGAGGGCCGGGGACCTaGGACCGGAGGAAGCGACGG +
Preference number: 4 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHRGPGT*DRRKRR
Trigger: CCGTCGCTTCCTCCGGTCCCAGGTCCCCGGCCCTCG...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp GGCTCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTCACTCCGGCCAAGCATaGCGATGCCCCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GSQLEGSPMRDTGGHPLLHSGQA*RCPRSW
Trigger: CCAAGACCGGGGGCATCGTCATGCTTGGCCGGAGTG...AAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp AGGTGGAGGCAGCACAGGGATGCGGTTCCTGGTGAGGAGGGTCCTCACTCGGTGGCTCTGGTTGACGGGTaGCGCACAGTCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWRQHRDAVPGEEGPHSVALVDG*RTVLQG
Trigger: GCCCTGGAGGACTGTGCGTCACCCGTCAACCAGAGC...CACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp TCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTCACTCCAGCTGCGGGGCCTaGTCACTGGTGCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SQLEGSPMRDTGGHPLLHSSCGA*SLVPVA
Trigger: TGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGA...GTGAAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CAA 72 bp AGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTaGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPGTWSSRWHQC*PQPASPRQRAH
Trigger: GTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp CCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCTCCAGATGGCACCAATaGTTGCCGCAGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: PVQHTIHTEVRGRGAPDGSRWHQ*LPQPAS
Trigger: CGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGA...GCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR TCA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCGAGGCACGCTCTGGTTaGCGGGTGACGCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPEARSG*RVTHSP
Trigger: AGGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTC...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp ATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTTGCCGCGATGGCACCAATGCTTaGCGCAGCCAGCATCGCCTC +
Preference number: 4 (lower is better)
Translates to: IHTEVRGRGAPDGTNACRDGTNA*RSQHRL
Trigger: GAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATC...GCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp TCCAGATGGCACCAATGCTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACGGCAGGGCCACTCACTaGCTGTTTCCAGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SRWHQCLPQPASPRQRAHGRATH*LFPVVW
Trigger: CCAAACCACTGGAAACAGGCAGTGAGTGGCCCTGCC...GTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp TGGCACCAATGCTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTGGACGTGGAGCTCCAGATaGCACCAATGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: WHQCLPQPASPRQRAHCWTWSSR*HQCLPQ
Trigger: CTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGT...CCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR TCA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACGCCCGTGGTGCCCGATaGGAACATGATGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHARGAR*EHDEQW
Trigger: CCACTGTTCATCATGTTCTCATCGGGCACCACGGGC...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACCCCCGGTCTTGGGGTTaGTTCTGCAGTAGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHPRSWG*FCSSRH
Trigger: ATGGCGACTACTGCAGAATCAACCCCAAGACCGGGG...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCGATGGCACCAATGCTTaGCGCAGCCAGCATCGCCTC +
Preference number: 4 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPDGTNA*RSQHRL
Trigger: GAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATC...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp ACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTTGCCGCAGCCGCTCACTGGTGCCGGTaGCAAGAAAGTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TPKSGDVELQMAPMLAAAAHWCR*QESHPE
Trigger: TTCTGGATGACTTTCTTGCCACCGGCACCAGTGAGC...GGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp AGGTGGAGGCAGCACAGGGATGCGGTTCCTGGTGAGGAGGGTCCTCACTCGGTGAGAATCCCACTCGTGTaGAAGATCCAGGTACCCACC +
Preference number: 4 (lower is better)
Translates to: RWRQHRDAVPGEEGPHSVRIPLV*KIQVPT
Trigger: GGTGGGTACCTGGATCTTCCACACGAGTGGGATTCT...CACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGTCCTTGGAGGGAAGCTaGCCCGGAGGCACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQSLEGS*PGGTLW
Trigger: CCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGA...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp GCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGGATGCGGTTCCTGGTaGGGAGGGTCCTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: AKWDNGTGRLKTRPWLRSGCGSW*GGSSLG
Trigger: ACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCC...ACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGCAGCGGAATGCACCATaGACTTGGGTGCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQQRNAP*TWVRPW
Trigger: CCACGGGCGCACCCAAGTGCATGGTGCATTCCGCTG...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACATGATGAACAGTGGGTaGCTGAAGGGCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHMMNSG*LKGSCS
Trigger: CGAGCAGCTGCCCTTCAGCCACCCACTGTTCATCAT...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACGGAGGATGTCACTGCTaGTCATGTTGCCGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHGGCHC*SCCRAA
Trigger: TGCTGCACGGCAACATGACCAGCAGTGACATCCTCC...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp ACACCCATTTTCCTCATTGCTGCTGCAAACAAAGCCACTTCTTGCCTCAGCTCTCGAGGGCCGGGGACCTaGGACCGGAGGAAGCGACGG +
Preference number: 4 (lower is better)
Translates to: TPIFLIAAANKATSCLSSRGPGT*DRRKRR
Trigger: CCGTCGCTTCCTCCGGTCCCAGGTCCCCGGCCCTCG...AGAGCTGAGGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCACGTGGAGCTCCAGATaGCACCAATGCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPTWSSR*HQCLPQ
Trigger: CTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGT...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGCCTTCAGATGCTGGATaGGGGTGCCCCCAGCGGAAT +
Preference number: 4 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQPSDAG*GCPQRN
Trigger: ATTCCGCTGGGGGCACCCTCATCCAGCATCTGAAGG...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGAGGGTCCTCACTCGGTaGCCACACTGCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGERVLTR*PHCLGS
Trigger: TGAGCCCAGGCAGTGTGGTCACCGAGTGAGGACCCT...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AGGTGGAGGCAGCACAGGGATGCGGTTCCTGGTGAGGAGGGTCCTCACTCGGTGCCTTTAACCACCTGCTaGAGCTTTTCCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RWRQHRDAVPGEEGPHSVPLTTC*SFSMWL
Trigger: CAACCACATGGAAAAGCTGCAGCAGGTGGTTAAAGG...CACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCCTTCACAGAGCAAAATaGGACAACGGGACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPLHRAK*DNGTGR
Trigger: CCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAG...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp CTAAAGCTCAAAGGCATACTGGACCCTGAGGGAAAACAGGAGAGCCTGAGATGGCCCGGAGGCACGCTCTaGTTGACGGGTGACGCACAG +
Preference number: 4 (lower is better)
Translates to: LKLKGILDPEGKQESLRWPGGTL*LTGDAQ
Trigger: CTGTGCGTCACCCGTCAACCAGAGCGTGCCTCCGGG...CCATCTCAGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GGCTCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTCAGCGTGCTCACTGTTaGGTAAATAACCAACAACCC +
Preference number: 4 (lower is better)
Translates to: GSQLEGSPMRDTGGHPLLQRAHC*VNNQQP
Trigger: GGGTTGTTGGTTATTTACCCAACAGTGAGCACGCTG...AAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp AATAAAGAGATCCTGTATGAAATCCACTCATTCCTTGGAGGGAAGCTGGCCCGGGCACACGGGTGCGGCTaGGTGACACGCCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: NKEILYEIHSFLGGKLARAHGCG*VTRQPV
Trigger: GACTGGCTGGCGTGTCACTCAGCCGCACCCGTGTGC...CCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp ATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTTGCCGCAGTGCCCATGGGCTTTaGAAATACATGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IHTEVRGRGAPDGTNACRSAHGL*KYMEAW
Trigger: CCAGGCTTCCATGTATTTTCAAAGCCCATGGGCACT...GCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp CTAAAGCTCAAAGGCATACTGGACCCTGAGGGAAAACAGGAGAGCCTGAGATGGTGCTCGAACTCCAGCTaGGGGGCCTGCTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: LKLKGILDPEGKQESLRWCSNSS*GACSLV
Trigger: CACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCA...CCATCTCAGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCCATTTTCCTCATTaGTGCTGCAAACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PVQHTIHTEVRGRGAPDGTHFPH*CCKQSH
Trigger: GTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGT...GCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp TGGCACCAATGCTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTGGCCTTTAACCACCTGCTaGAGCTTTTCCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: WHQCLPQPASPRQRAHCWPLTTC*SFSMWL
Trigger: CAACCACATGGAAAAGCTGCAGCAGGTGGTTAAAGG...CCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp CTAAAGCTCAAAGGCATACTGGACCCTGAGGGAAAACAGGAGAGCCTGAGATGGAATGCACCATGCACTTaGGTGCGCCCGTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LKLKGILDPEGKQESLRWNAPCT*VRPWCP
Trigger: CGGGCACCACGGGCGCACCCAAGTGCATGGTGCATT...CCATCTCAGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GGCTCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTATGAGCCCAGATACCTaGGAATTTGGAGAAATACGC +
Preference number: 4 (lower is better)
Translates to: GSQLEGSPMRDTGGHPLLMSPDT*EFGEIR
Trigger: GCGTATTTCTCCAAATTCCCAGGTATCTGGGCTCAT...AAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp CCACTCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGAACGGTCAGGAGCGCCTaGCGGGCTGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: PLVWKIQVPTRFNKTEKRTVRSA*RAGSAT
Trigger: CGTCGCTGACCCAGCCCGCCAGGCGCTCCTGACCGT...TCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCACGGGTGCGGCTGAGTaGCACGCCAGCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSTGAAE*HASQSD
Trigger: GTCAGACTGGCTGGCGTGTCACTCAGCCGCACCCGT...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGAGGCATACTGGACCCTaGGGGAAAACAGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQRHTGP*GKTGEP
Trigger: AGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCT...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAACACTCTCACCACAGTaGCACACCTGCGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: KGFAPSQSKMGQRDGEVETLSPQ*HTCGPD
Trigger: GTCTGGGCCGCAGGTGTGGCACTGTGGTGAGAGTGT...TTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp ACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTTGCCGCAGCCAACAAAGCCACTTCTTaGCTCAGCTCTTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: TPKSGDVELQMAPMLAAANKATS*LSSSKV
Trigger: GACTTTTGAAGAGCTGAGGCAAGAAGTGGCTTTGTT...GGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCAGGCCTTTAACCACCTaGTGCAGCTTTTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPRPLTT*CSFSMW
Trigger: CCACATGGAAAAGCTGCAGCAGGTGGTTAAAGGCCT...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AGATGGCACCAATGCTTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTCACAATTTCCTCTTTaGCTTCCCCAGCCCCATATG +
Preference number: 4 (lower is better)
Translates to: RWHQCLPQPASPRQRAHCSQFPL*LPQPHM
Trigger: CATATGGGGCTGGGGAAGGCAAAGAGGAAATTGTGA...ACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp AATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTGACACGGCGGGGCCTGCTCACTaGTGCCGGTGGCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: NFLSTQKLQCTRVRLSDTAGPAH*CRWQES
Trigger: ACTTTCTTGCCACCGGCACCAGTGAGCAGGCCCCGC...CGTGTCACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGCTAGCAACTCTCAGGTaGAGGCAGCACAGGGATGCG +
Preference number: 4 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGELATLR*RQHRDA
Trigger: CGCATCCCTGTGCTGCCTCCACCTGAGAGTTGCTAG...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGGGGTGCTGATGACATaGTCTCGACAAGAACCCCCT +
Preference number: 4 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGEGVLMT*SRQEPP
Trigger: AGGGGGTTCTTGTCGAGATCATGTCATCAGCACCCC...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCGTGCCCCCAGCGGAATaGACCATGCACTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSVPPAE*TMHLGA
Trigger: CGCACCCAAGTGCATGGTGCATTCCGCTGGGGGCAC...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACATTGTACATACCAACTaGCTGGCTATGGAAACCCGT +
Preference number: 4 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHIVHTN*LAMETR
Trigger: ACGGGTTTCCATAGCCAGGCAGTTGGTATGTACAAT...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGCCACTCGGGGACATCTaGGATTCCTTTCGATGTGTC +
Preference number: 4 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQPLGDI*DSFRCV
Trigger: GACACATCGAAAGGAATCGCAGATGTCCCCGAGTGG...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGCCGCAGGAGGTTTTCTaGATAGTTGAGCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGEPQEVF*IVEPTA
Trigger: GGCAGTCGGCTCAACTATGCAGAAAACCTCCTGCGG...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp TCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTCACCATTTTCCTCATTGCTaGTGCAAACAAAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: SQLEGSPMRDTGGHPLLHHFPHC*CKQSHF
Trigger: GAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATG...GTGAAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGCCAGACACTCCCTCCTaGTCTCTGAAGGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGEPDTPS*SLKARI
Trigger: GATTCTGGCCTTCAGAGACCAGGAGGGAGTGTCTGG...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGCATGAGGGACACGGGTaGACACCCACTGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGEHEGHG*TPTASH
Trigger: ATGTGAAGCAGTGGGTGTCCACCCGTGTCCCTCATG...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp CCACCTGCTGCAGCTTTTCCATGTGGTTGTGCTCTTTGCCATTATAGACAACAGCTGCACAGGGGCTGCTaGTCCTTCCCACGATGGCAG +
Preference number: 4 (lower is better)
Translates to: PPAAAFPCGCALCHYRQQLHRGC*SFPRWQ
Trigger: CTGCCATCGTGGGAAGGACCAGCAGCCCCTGTGCAG...CTGTTGTCTATAATGGCAAAGAGCACAACCACATGGAAAAGCTGCAGCAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR TCA 90 bp AACCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGCTCATCATACACACGTaGGAAGACAATTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: NRSSTPFTPKSGDVELQMLIIHT*EDNSTE
Trigger: TTCAGTGGAATTGTCTTCTCACGTGTGTATGATGAG...CATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp TTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGATATAGATTTCCGAGCTaGCGAACCGCACCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LHLHRAKWDNGTGRLKTRYRFPS*RTAPRW
Trigger: CCAACGGGGTGCGGTTCGGCAGCTCGGAAATCTATA...TCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCCTCTTTGCCTTCCCTTaGAATGTAAAGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPLFAFP*NVKGNS
Trigger: AGAGTTGCCCTTTACATTGCAAGGGAAGGCAAAGAG...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AACCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGCATTTTCCTCATTGCTaGTGCAAACAAAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: NRSSTPFTPKSGDVELQMHFPHC*CKQSHF
Trigger: GAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATG...CATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp ACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTTGCCGCAGCCTTTCTTGTGCTGATTTaGAATGTAAAGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: TPKSGDVELQMAPMLAAAFLVLI*NVKGNS
Trigger: AGAGTTGCCCTTTACATTGCAAATCAGCACAAGAAA...GGCTGCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp TTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGAGTGGACAGGATCGTGTaGAGCATCTGGAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LHLHRAKWDNGTGRLKTRVDRIV*SIWRLW
Trigger: CCACAGTCTCCAGATGCTCCACACGATCCTGTCCAC...TCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GAAACACACTGTTTGGAATCTTTGAAAGGTCTATGTTCTCTCTGGAGGACACATACGGTCAGGAGCGCCTaGCGGGCTGGGTCAGCGACG +
Preference number: 4 (lower is better)
Translates to: ETHCLESLKGLCSLWRTHTVRSA*RAGSAT
Trigger: CGTCGCTGACCCAGCCCGCCAGGCGCTCCTGACCGT...ATGTGTCCTCCAGAGAGAACATAGACCTTTCAAAGATTCCAAACAGTGTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCCGAAGTCCGGGGACGTaGAGCTCCAGATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSRSPGT*SSRWHQ
Trigger: TTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCG...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp AACCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGGTCTATGTTCTCTCTaGAGGACACATAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: NRSSTPFTPKSGDVELQMGLCSL*RTHKES
Trigger: TGATTCCTTATGTGTCCTCCAGAGAGAACATAGACC...CATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
3UTR CAA 72 bp GCAATAAAGAGATCCTGTATGAAATCCACTCATTCCTaGGAGGGAAGCTGGCCCGGAGGCACGCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AIKRSCMKSTHS*EGSWPGGTLWL
Trigger: CAACCAGAGCGTGCCTCCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp CCACTCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGAGATGTCGGTGCCTCCTaGGATGGAGCCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLVWKIQVPTRFNKTEKRDVGAS*DGAQED
Trigger: ATCCTCCTGGGCTCCATCTCAGGAGGCACCGACATC...TCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp TTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTGGGTAAATAACCAACCTCCACAGAGAAGATaGGCTTTGGCTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: LPQPASPRQRAHCWVNNQPPQRR*ALAEFE
Trigger: CTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGG...TTGGTTATTTACCCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp CTAAAGCTCAAAGGCATACTGGACCCTGAGGGAAAACAGGAGAGCCTGAGATGGCTCCAGGGCCTGCATTaGATCCATGACACAGACACA +
Preference number: 4 (lower is better)
Translates to: LKLKGILDPEGKQESLRWLQGLH*IHDTDT
Trigger: TGTGTCTGTGTCATGGATGCAATGCAGGCCCTGGAG...CCATCTCAGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CTCCACAGAGAAGATGAGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCCCGCAGGAGGTTTTCTaGATAGTTGAGCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: LHREDELWLNLRKPVQHTPQEVF*IVEPTA
Trigger: GGCAGTCGGCTCAACTATGCAGAAAACCTCCTGCGG...GGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCTCCAGATGGCACCAATaGTTGCCGCAGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSSRWHQ*LPQPAS
Trigger: CGATGCTGGCTGCGGCAAGCATTGGTGCCATCTGGA...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp AATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTGACACGTCATCCAGCCGACCGTaGTGTAGCACAGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: NFLSTQKLQCTRVRLSDTSSSRP*CSTGGC
Trigger: ACATCCTCCTGTGCTACACCACGGTCGGCTGGATGA...CGTGTCACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp CTAAAGCTCAAAGGCATACTGGACCCTGAGGGAAAACAGGAGAGCCTGAGATGGCAGTTACCAGGACAGTaGTGCCTATCCTGTCAACCA +
Preference number: 4 (lower is better)
Translates to: LKLKGILDPEGKQESLRWQLPGQ*CLSCQP
Trigger: TGGTTGACAGGATAGGCATCACTGTCCTGGTAACTG...CCATCTCAGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp AAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAGGAGGATGCTGCTCTTaGTGCACCTGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: KGFAPSQSKMGQRDGEVEGGCCS*CTCRHT
Trigger: AGTATGTCTACAGGTGCATCAAGAGCAGCATCCTCC...TTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp CTGTATAATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTACGGGACGGGGAGGTTaGAGACAAGACCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LYNFLSTQKLQCTRVRLSTGRGG*RQDLGS
Trigger: TGAGCCAAGGTCTTGTCTTCAACCTCCCCGTCCCGT...ACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATTATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp AACCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGACTGTTTGGAATCTTTaGAAGGTCTATGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NRSSTPFTPKSGDVELQMTVWNL*KVYVLS
Trigger: AGAGAGAACATAGACCTTTCAAAGATTCCAAACAGT...CATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp TCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCCCCCACCGTTCCCGCTaGACTGTGTGTGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: SCGRSRYPPDLTKQRNDPPHRSR*TVCAKT
Trigger: TGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGG...GGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACAAGCCATTCAGTCTGTaGAATAAAGAGATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHKPFSL*NKEILY
Trigger: ATACAGGATCTCTTTATTGCACAGACTGAATGGCTT...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CTCCACAGAGAAGATGAGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCCCACTCGGGGACATCTaGGATTCCTTTCGATGTGTC +
Preference number: 4 (lower is better)
Translates to: LHREDELWLNLRKPVQHTPLGDI*DSFRCV
Trigger: GACACATCGAAAGGAATCGCAGATGTCCCCGAGTGG...GGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp AAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAAGCTCAAAGGCATACTaGACCCTGAGGGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: KGFAPSQSKMGQRDGEVESSKAY*TLRENR
Trigger: CCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCT...TTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp CACTGTTGGGTAAATAACCAACAACCCGATCTCCTTTCTTCACACCCATTTTCCCGAAGTCCGGGGACGTaGAGCTCCAGATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: HCWVNNQQPDLLSSHPFSRSPGT*SSRWHQ
Trigger: TTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCG...GGAAAATGGGTGTGAAGAAAGGAGATCGGGTTGTTGGTTATTTACCCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp ACACCCATTTTCCTCATTGCTGCTGCAAACAAAGCCACTTCTTGCCTCAGCTCTAAATACATGGAAGCCTaGGCCCCAGCCCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TPIFLIAAANKATSCLSSKYMEA*APAPED
Trigger: ATCTTCCGGGGCTGGGGCCCAGGCTTCCATGTATTT...AGAGCTGAGGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR TCA 90 bp TCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCCCTAGCAGCCAGCTGTaGAAGCTGTGTCAAGTCACG +
Preference number: 4 (lower is better)
Translates to: SCGRSRYPPDLTKQRNDPPSSQL*KLCQVT
Trigger: CGTGACTTGACACAGCTTTCACAGCTGGCTGCTAGG...GGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CAGAACACTTGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTTCTGTATAATTTGGCTGAAGGGCAGCTaGTCGAACTCCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: QNTWCEHPFTTAVGFCIIWLKGS*SNSSCG
Trigger: CCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCA...AATTATACAGAAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AATAAAGAGATCCTGTATGAAATCCACTCATTCCTTGGAGGGAAGCTGGCCCGGCGGGTGGACACCCACTaGTTCACATGCCTAATTCAC +
Preference number: 4 (lower is better)
Translates to: NKEILYEIHSFLGGKLARRVDTH*FTCLIH
Trigger: GTGAATTAGGCATGTGAAGCAGTGGGTGTCCACCCG...CCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp TCTGGTAGGCCTTTAACCACCTGCTGCAGCTTTTCCATGTGGTTGTGCTCTTTGCGGAAGCGGTCCATCTaGGTGTTCTTCTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: SGRPLTTCCSFSMWLCSLRKRSI*VFFLLS
Trigger: TGACAGTAAGAAGAACACGCAGATGGACCGCTTCCG...CAAAGAGCACAACCACATGGAAAAGCTGCAGCAGGTGGTTAAAGGCCTACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp AGCCTCCACAGAGAAGATGAGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACAGGCCTTTAACCACCTaGTGCAGCTTTTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: SLHREDELWLNLRKPVQHRPLTT*CSFSMW
Trigger: CCACATGGAAAAGCTGCAGCAGGTGGTTAAAGGCCT...GTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCGCTCACTGGTGCCGGTaGCAAGAAAGTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSAHWCR*QESHPE
Trigger: TTCTGGATGACTTTCTTGCCACCGGCACCAGTGAGC...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp CAGAACACTTGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTTCTGTATAATTCGGTGCCTCCTGAGATaGAGCCCAGGAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: QNTWCEHPFTTAVGFCIIRCLLR*SPGGCC
Trigger: GCAGCATCCTCCTGGGCTCCATCTCAGGAGGCACCG...AATTATACAGAAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp AAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAATTGAAGACAAGACCTTaGCTCAGGAGTGTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: KGFAPSQSKMGQRDGEVELKTRP*LRSVSV
Trigger: GACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAA...TTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp GCCTTTAACCACCTGCTGCAGCTTTTCCATGTGGTTGTGCTCTTTGCCATTATAGGCTTTGAAAATACATaGAAGCCTGGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AFNHLLQLFHVVVLFAIIGFENT*KPGPQP
Trigger: GGGCTGGGGCCCAGGCTTCCATGTATTTTCAAAGCC...TATAATGGCAAAGAGCACAACCACATGGAAAAGCTGCAGCAGGTGGTTAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR TCA 90 bp TCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTGGAAACCCGTGACTTaGCTTAGGGGTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: SCGRSRYPPDLTKQRNDPWKPVT*LRGADD
Trigger: GTCATCAGCACCCCTAAGTCAAGTCACGGGTTTCCA...GGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGGGAAGAAAGGGATTTaGACCTTCACAGAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGEGKKGI*TFTEQN
Trigger: ATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCCC...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTGACACGCTGTCATTCTCTTTGTaGCGCAGGAGGTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NFLSTQKLQCTRVRLSDTLSFSL*RRRFSA
Trigger: TGCAGAAAACCTCCTGCGGCACAAAGAGAATGACAG...CGTGTCACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp TTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGAAGCCTACAGAACACTTaGTGCGAGCATCCTTTTACA +
Preference number: 4 (lower is better)
Translates to: LHLHRAKWDNGTGRLKTRSLQNT*CEHPFT
Trigger: TGTAAAAGGATGCTCGCACCAAGTGTTCTGTAGGCT...TCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CAA 72 bp ACAGAGAAACGATCCCTCCCCAAGCCTACAGAACACTaGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: TEKRSLPKPTEH*VRASFYNSCRF
Trigger: AAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTGTAGGCTTGGGGAGGGATCGTTTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
3UTR CAA 72 bp CAACCCGATCTCCTTTCTTCACACCCATTTTCCTCATaGCTGCTGCAAACAAAGCCACTTCTTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QPDLLSSHPFSS*LLQTKPLLASA
Trigger: AGCTGAGGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGTGAAGAAAGGAGATCGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp TCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCCGGAAGCGGTCCATCTaGGTGTTCTTCTTACTGTCA +
Preference number: 4 (lower is better)
Translates to: SCGRSRYPPDLTKQRNDPRKRSI*VFFLLS
Trigger: TGACAGTAAGAAGAACACGCAGATGGACCGCTTCCG...GGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp TTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGATGTGGTTGTGCTCTTTaGCATTATAGACAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LHLHRAKWDNGTGRLKTRCGCAL*HYRQQP
Trigger: AGGCTGTTGTCTATAATGGCAAAGAGCACAACCACA...TCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CCA 90 bp AATAAAGAGATCCTGTATGAAATCCACTCATTCCTTGGAGGGAAGCTGGCCCGGTACATACCAACTGCCTaGCTATGGAAACCCGTGACT +
Preference number: 4 (lower is better)
Translates to: NKEILYEIHSFLGGKLARYIPTA*LWKPVT
Trigger: AGTCACGGGTTTCCATAGCCAGGCAGTTGGTATGTA...CCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTTCATACAGGATCTCTTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp CAGAACACTTGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTTCTGTATAATTCCACTTTCTTGCCGTTaGGCGTATACGGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: QNTWCEHPFTTAVGFCIIPLSCR*AYTGCP
Trigger: AGGGCATCCCGTATACGCTCAACGGCAAGAAAGTGG...AATTATACAGAAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp CAGAACACTTGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTTCTGTATAATTGGCTATGGAAACCCGTaGCTTGACTTAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QNTWCEHPFTTAVGFCIIGYGNP*LDLGVL
Trigger: CAGCACCCCTAAGTCAAGTCACGGGTTTCCATAGCC...AATTATACAGAAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp AATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTGACACGCTCATCATACACACGTaGGAAGACAATTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: NFLSTQKLQCTRVRLSDTLIIHT*EDNSTE
Trigger: TTCAGTGGAATTGTCTTCTCACGTGTGTATGATGAG...CGTGTCACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp CCACTCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGACCTCCACAGAGAAGATaGGCTTTGGCTGAATTTGAG +
Preference number: 4 (lower is better)
Translates to: PLVWKIQVPTRFNKTEKRPPQRR*ALAEFE
Trigger: CTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGG...TCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CTAAAGCTCAAAGGCATACTGGACCCTGAGGGAAAACAGGAGAGCCTGAGATGGACCCACTGCTTCACATaGCTAATTCACATTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LKLKGILDPEGKQESLRWTHCFT*LIHIRN
Trigger: GTTTCTAATGTGAATTAGGCATGTGAAGCAGTGGGT...CCATCTCAGGCTCTCCTGTTTTCCCTCAGGGTCCAGTATGCCTTTGAGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CTTTCTTCACACCCATTTTCCTCATTGCTGCTGCAAACAAAGCCACTTCTTGCCCTGTCATTCTCTTTGTaGCGCAGGAGGTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSSHPFSSLLLQTKPLLALSFSL*RRRFSA
Trigger: TGCAGAAAACCTCCTGCGGCACAAAGAGAATGACAG...GGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGTGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR TCA 90 bp AAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAATACAAGTTCATACGCTaGACTGAATTGTACATACCA +
Preference number: 4 (lower is better)
Translates to: KGFAPSQSKMGQRDGEVEYKFIR*TELYIP
Trigger: TGGTATGTACAATTCAGTTCAGCGTATGAACTTGTA...TTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCAACAAAGCCACTTCTTaGCTCAGCTCTTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSNKATS*LSSSKV
Trigger: GACTTTTGAAGAGCTGAGGCAAGAAGTGGCTTTGTT...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CTGTATAATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTACCCATTTTCCTCATTaGTGCTGCAAACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LYNFLSTQKLQCTRVRLSTHFPH*CCKQSH
Trigger: GTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGT...ACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATTATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp ACACCCATTTTCCTCATTGCTGCTGCAAACAAAGCCACTTCTTGCCTCAGCTCTTGTGGTTGTGCTCTTTaGCATTATAGACAACAGCCT +
Preference number: 4 (lower is better)
Translates to: TPIFLIAAANKATSCLSSCGCAL*HYRQQP
Trigger: AGGCTGTTGTCTATAATGGCAAAGAGCACAACCACA...AGAGCTGAGGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp TTTCTTCACACCCATTTTCCTCATTGCTGCTGCAAACAAAGCCACTTCTTGCCTCAGCGTGCTCACTGTTaGGTAAATAACCAACAACCC +
Preference number: 4 (lower is better)
Translates to: FLHTHFPHCCCKQSHFLPQRAHC*VNNQQP
Trigger: GGGTTGTTGGTTATTTACCCAACAGTGAGCACGCTG...AGGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CCA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCGGTCTATGTTCTCTCTaGAGGACACATAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSGLCSL*RTHKES
Trigger: TGATTCCTTATGTGTCCTCCAGAGAGAACATAGACC...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp TCGTGTGGAAGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCGTTCATACGCTGAACTaGATTGTACATACCAACTGC +
Preference number: 4 (lower is better)
Translates to: SCGRSRYPPDLTKQRNDPVHTLN*IVHTNC
Trigger: GCAGTTGGTATGTACAATTCAGTTCAGCGTATGAAC...GGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCTTCCACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR TCA 90 bp GAAACACACTGTTTGGAATCTTTGAAAGGTCTATGTTCTCTCTGGAGGACACATGGAACTGGACTGCCATaGTCTTTACCAACTGCACAG +
Preference number: 4 (lower is better)
Translates to: ETHCLESLKGLCSLWRTHGTGLP*SLPTAQ
Trigger: CTGTGCAGTTGGTAAAGATCATGGCAGTCCAGTTCC...ATGTGTCCTCCAGAGAGAACATAGACCTTTCAAAGATTCCAAACAGTGTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR GCA 90 bp CTGTATAATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTCTACAGAACACTTGGTaGGAGCATCCTTTTACAACA +
Preference number: 4 (lower is better)
Translates to: LYNFLSTQKLQCTRVRLSLQNTW*EHPFTT
Trigger: TGTTGTAAAAGGATGCTCGCACCAAGTGTTCTGTAG...ACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATTATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp TCTCTCTGGAGGACACATAAGGAATCACCACCACTTTCTTCAAGTCTGGTAGGCAATGTGCATCAGAAGTaGCCATGGGCTTTGAAAATA +
Preference number: 4 (lower is better)
Translates to: SLWRTHKESPPLSSSLVGNVHQK*PWALKI
Trigger: TATTTTCAAAGCCCATGGGCACTTCTGATGCACATT...GCCTACCAGACTTGAAGAAAGTGGTGGTGATTCCTTATGTGTCCTCCAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR TCA 90 bp CAGAACACTTGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTTCTGTATAATTACTGTTTGGAATCTTTaGAAGGTCTATGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QNTWCEHPFTTAVGFCIITVWNL*KVYVLS
Trigger: AGAGAGAACATAGACCTTTCAAAGATTCCAAACAGT...AATTATACAGAAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR GCA 90 bp CAGAACACTTGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTTCTGTATAATTTCACAATTTCCTCTTTaGCTTCCCTTGCAATGTAAA +
Preference number: 4 (lower is better)
Translates to: QNTWCEHPFTTAVGFCIISQFPL*LPLQCK
Trigger: TTTACATTGCAAGGGAAGGCAAAGAGGAAATTGTGA...AATTATACAGAAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS GCA 90 bp GCCAGGCCGCAGGCGGCGCCCACAGCCGCCCGGAAGCGGTCCATCTaGGTGTTCTTCTTACTGTCAGGCTCCCACATCACCTGGCACTCC +
Preference number: 5 (lower is better)
Translates to: ARPQAAPTAARKRSI*VFFLLSGSHITWHS
Trigger: GGAGTGCCAGGTGATGTGGGAGCCTGACAGTAAGAAGAACACGCAGATGGACCGCTTCCGGGCGGCTGTGGGCGCCGCCTGCGGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS GCA 90 bp ACGCCCTCCCTGAACCCAGCAGGGCTCCATCATCAGCCCAGCTGGTaGTGCGGCCTGATGCACGGCTGGCCAGTCTCACTCCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TPSLNPAGLHHQPSW*CGLMHGWPVSLLWA
Trigger: GGCCCAGAGGAGTGAGACTGGCCAGCCGTGCATCAGGCCGCAGCACCAGCTGGGCTGATGATGGAGCCCTGCTGGGTTCAGGGAGGGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537564.5
CDS CCA 90 bp GCCACGCCCTCCCTGAACCCAGCAGGGCTCCATCATCAGCCCAGCTaGTGCTGCGGCCTGATGCACGGCTGGCCAGTCTCACTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ATPSLNPAGLHHQPS*CCGLMHGWPVSLLW
Trigger: CCAGAGGAGTGAGACTGGCCAGCCGTGCATCAGGCCGCAGCACCAGCTGGGCTGATGATGGAGCCCTGCTGGGTTCAGGGAGGGCGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537564.5
CDS GCA 90 bp GTGCCCGATGAGAACATGATGAACAGTGGGTGGCTGAAGGGCAGCTaGTCGAACTCCAGCTGCGGGGCCTGCTCACTGGTGCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VPDENMMNSGWLKGS*SNSSCGACSLVPVA
Trigger: TGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCACCCACTGTTCATCATGTTCTCATCGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS CCA 90 bp TTGGGTGCGCCCGTGGTGCCCGATGAGAACATGATGAACAGTGGGTaGCTGAAGGGCAGCTGCTCGAACTCCAGCTGCGGGGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LGAPVVPDENMMNSG*LKGSCSNSSCGACS
Trigger: TGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCACCCACTGTTCATCATGTTCTCATCGGGCACCACGGGCGCACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS TCA 90 bp CACCTAGGGCTACCCCCAGGGCACATACAGTGGCCCCAGAACCTGTaGGTAAGGACTTCACAGCACAGGCTCTCCACCCTGGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: HLGLPPGHIQWPQNL*VRTSQHRLSTLAAW
Trigger: CCAGGCAGCCAGGGTGGAGAGCCTGTGCTGTGAAGTCCTTACTCACAGGTTCTGGGGCCACTGTATGTGCCCTGGGGGTAGCCCTAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 90 bp CGGTCCATCTGCGTGTTCTTCTTACTGTCAGGCTCCCACATCACCTaGCACTCCAGGATCTCCTCCCGACCGGGGCGCTCCTCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: RSICVFFLLSGSHIT*HSRISSRPGRSSLD
Trigger: GTCCAAGGAGGAGCGCCCCGGTCGGGAGGAGATCCTGGAGTGCCAGGTGATGTGGGAGCCTGACAGTAAGAAGAACACGCAGATGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS TCA 90 bp CTGACTCAGGTGCTTCAGGCGACAGAGCCCACCGCGGCCGCACAATaGCAGGCAGGATCACTGAGAGCTGACTGTGCACGCTTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LTQVLQATEPTAAAQ*QAGSLRADCARFAE
Trigger: CTCTGCAAAGCGTGCACAGTCAGCTCTCAGTGATCCTGCCTGTCATTGTGCGGCCGCGGTGGGCTCTGTCGCCTGAAGCACCTGAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS TCA 90 bp CCCAGCGGAATGCACCATGCACTTGGGTGCGCCCGTGGTGCCCGATaGGAACATGATGAACAGTGGGTGGCTGAAGGGCAGCTGCTCGAA +
Preference number: 5 (lower is better)
Translates to: PSGMHHALGCARGAR*EHDEQWVAEGQLLE
Trigger: TTCGAGCAGCTGCCCTTCAGCCACCCACTGTTCATCATGTTCTCATCGGGCACCACGGGCGCACCCAAGTGCATGGTGCATTCCGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS TCA 90 bp CTCAGCCCAAATGCCAAGACCTCTCGAGGACTCTCGAGGACTCCCTaGCCCCAGGTCTCTGACAGCACTCCTCAGAGCCTGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSPNAKTSRGLSRTP*PQVSDSTPQSLRLA
Trigger: GGCCAACCTCAGGCTCTGAGGAGTGCTGTCAGAGACCTGGGGTCAGGGAGTCCTCGAGAGTCCTCGAGAGGTCTTGGCATTTGGGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS GCA 90 bp AGTGGGTGGCTGAAGGGCAGCTGCTCGAACTCCAGCTGCGGGGCCTaGTCACTGGTGCCGGTGGCAAGAAAGTCATCCAGAAACACACTG +
Preference number: 5 (lower is better)
Translates to: SGWLKGSCSNSSCGA*SLVPVARKSSRNTL
Trigger: CAGTGTGTTTCTGGATGACTTTCTTGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCACCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316519.11
ENST00000441247.6
ENST00000537564.5
CDS-3UTR CAA 90 bp GCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTCCGAACCGCACCCCGTaGGGGTTGAGGGTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: AKWDNGTGRLKTRPWLRSPNRTP*GLRVPS
Trigger: TGACGGCACCCTCAACCCCAACGGGGTGCGGTTCGG...ACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp CCGGTCCAGCACACCATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCTTGAGCCGACTGCCTTaGAACCACTCGGGGACATCT +
Preference number: 5 (lower is better)
Translates to: PVQHTIHTEVRGRGAPDGLSRLP*NHSGTS
Trigger: AGATGTCCCCGAGTGGTTCAAAGGCAGTCGGCTCAA...GCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAATGGTGTGCTGGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS GCA 90 bp AGTGGGTGGCTGAAGGGCAGCTGCTCGAACTCCAGCTGCGGGGCCTaGTCACTGGTGCCGGTGGCAAGAAAGTCATCCAGAAACACACTT +
Preference number: 5 (lower is better)
Translates to: SGWLKGSCSNSSCGA*SLVPVARKSSRNTL
Trigger: AAGTGTGTTTCTGGATGACTTTCTTGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS GCA 90 bp ATGATGAACAGTGGGTGGCTGAAGGGCAGCTGCTCGAACTCCAGCTaGGGGGCCTGCTCACTGGTGCCGGTGGCAAGAAAGTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: MMNSGWLKGSCSNSS*GACSLVPVARKSSR
Trigger: TCTGGATGACTTTCTTGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCACCCACTGTTCATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS-3UTR CAA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGGGAGGCACGCTCTGGTaGACGGGTGACGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQGGTLW*TGDAQS
Trigger: GGACTGTGCGTCACCCGTCAACCAGAGCGTGCCTCC...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp AATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTGACACGCGCACCCCGTTGGGGTaGAGGGTGCCGTCACTCCGG +
Preference number: 5 (lower is better)
Translates to: NFLSTQKLQCTRVRLSDTRTPLG*RVPSLR
Trigger: CCGGAGTGACGGCACCCTCAACCCCAACGGGGTGCG...CGTGTCACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp GGCTCACAGCTGGAGGGCTCACCCATGAGGGACACGGGTGGACACCCACTGCTTCCTCTTTGCCTTCCCTaGCAATGTAAAGGGCAACTC +
Preference number: 5 (lower is better)
Translates to: GSQLEGSPMRDTGGHPLLPLCLP*QCKGQL
Trigger: GAGTTGCCCTTTACATTGCAAGGGAAGGCAAAGAGG...AAGCAGTGGGTGTCCACCCGTGTCCCTCATGGGTGAGCCCTCCAGCTGTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp ATTCACACCGAAGTCCGGGGACGTGGAGCTCCAGATGGCACCAATGCTTGCCGCTGGTACGTCGAGACGTaGCTCCATGGCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: IHTEVRGRGAPDGTNACRWYVET*LHGSSP
Trigger: TGGTGAAGAGCCATGGAGCAACGTCTCGACGTACCA...GCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGACTTCGGTGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS TCA 90 bp CAAGACCTCTCGAGGACTCTCGAGGACTCCCTGACCCCAGGTCTCTaGCAGCACTCCTCAGAGCCTGAGGTTGGCCTCTGTCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: QDLSRTLEDSLTPGL*QHSSEPEVGLCLFL
Trigger: AAGGAAAAGACAGAGGCCAACCTCAGGCTCTGAGGAGTGCTGTCAGAGACCTGGGGTCAGGGAGTCCTCGAGAGTCCTCGAGAGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS CCA 90 bp GCACCTGGTTATAATTTATTAAGGTCGGCAGGGTCCCACAGTCCATaGGACAGGCACCCGGGCCTGCCTGTGAAGAATCTGCCCACCCTG +
Preference number: 5 (lower is better)
Translates to: APGYNLLRSAGSHSP*DRHPGLPVKNLPTL
Trigger: CAGGGTGGGCAGATTCTTCACAGGCAGGCCCGGGTGCCTGTCCCATGGACTGTGGGACCCTGCCGACCTTAATAAATTATAACCAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS-3UTR CAA 90 bp AGGTGGAGGCAGCACAGGGATGCGGTTCCTGGTGAGGAGGGTCCTCACTCGGTGAAGCCTACAGAACACTaGGTGCGAGCATCCTTTTAC +
Preference number: 5 (lower is better)
Translates to: RWRQHRDAVPGEEGPHSVKPTEH*VRASFY
Trigger: GTAAAAGGATGCTCGCACCAAGTGTTCTGTAGGCTT...CACCGAGTGAGGACCCTCCTCACCAGGAACCGCATCCCTGTGCTGCCTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCAAATCCACTCATTCCTaGGAGGGAAGCTGGCCCGGA +
Preference number: 5 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPKSTHS*EGSWPG
Trigger: TCCGGGCCAGCTTCCCTCCAAGGAATGAGTGGATTT...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp CCCTCCTGGTCTCTGAAGGCCAGAATCCCACTCGTGTGGAAGATCCAGGTACCCTTGAGCCGACTGCCTTaGAACCACTCGGGGACATCT +
Preference number: 5 (lower is better)
Translates to: PSWSLKARIPLVWKIQVPLSRLP*NHSGTS
Trigger: AGATGTCCCCGAGTGGTTCAAAGGCAGTCGGCTCAA...GGGTACCTGGATCTTCCACACGAGTGGGATTCTGGCCTTCAGAGACCAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp TTGCCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTGGGTAAATAACCAAAGATGGCACCAATGCTaGCCGCAGCCAGCATCGCCT +
Preference number: 5 (lower is better)
Translates to: LPQPASPRQRAHCWVNNQRWHQC*PQPASP
Trigger: AGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCT...TTGGTTATTTACCCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS TCA 90 bp AGAGCCCACCGCGGCCGCACAATGACAGGCAGGATCACTGAGAGCTaGCTGTGCACGCTTTGCAGAGCAGCAGCTTATTTAATCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RAHRGRTMTGRITES*LCTLCRAAAYLILP
Trigger: TGGGAGGATTAAATAAGCTGCTGCTCTGCAAAGCGTGCACAGTCAGCTCTCAGTGATCCTGCCTGTCATTGTGCGGCCGCGGTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS TCA 90 bp AGGCGACAGAGCCCACCGCGGCCGCACAATGACAGGCAGGATCACTaGGAGCTGACTGTGCACGCTTTGCAGAGCAGCAGCTTATTTAAT +
Preference number: 5 (lower is better)
Translates to: RRQSPPRPHNDRQDH*ELTVHALQSSSLFN
Trigger: ATTAAATAAGCTGCTGCTCTGCAAAGCGTGCACAGTCAGCTCTCAGTGATCCTGCCTGTCATTGTGCGGCCGCGGTGGGCTCTGTCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS GCA 90 bp CCCCCGGCCCCGTCAATTCTCCACAGATGGGCACGTACCCGTTTCTaGTTTATCTGTGGCATCCACAATCAAAGGATGGACTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PPAPSILHRWARTRF*FICGIHNQRMDCSG
Trigger: CCCACTGCAGTCCATCCTTTGATTGTGGATGCCACAGATAAAGCAGAAACGGGTACGTGCCCATCTGTGGAGAATTGACGGGGCCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS GCA 90 bp TCTGGTCTGTACTGCACGTGGAGTCTGCAGTCCAGCCAAGGGCACTaGTTTCCTGAAACAGGGGATTCCTTCCATGCAGGCATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SGLYCTWSLQSSQGH*FPETGDSFHAGMGL
Trigger: CAAGCCCATGCCTGCATGGAAGGAATCCCCTGTTTCAGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTACAGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 90 bp AAAGCCCACAGGGTGGCTCCCCCGGCCCCGTCAATTCTCCACAGATaGGCACGTACCCGTTTCTGCTTTATCTGTGGCATCCACAATCAA +
Preference number: 5 (lower is better)
Translates to: KAHRVAPPAPSILHR*ARTRFCFICGIHNQ
Trigger: TTGATTGTGGATGCCACAGATAAAGCAGAAACGGGTACGTGCCCATCTGTGGAGAATTGACGGGGCCGGGGGAGCCACCCTGTGGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS-3UTR CAA 90 bp TTCAGCACCAGCCAGCCCCACCGTTCCCGCTGCACTGTGTGTGCAAAGACACACGTTGAAGACAAGACCTaGGCTCAGGAGTGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: FSTSQPHRSRCTVCAKTHVEDKT*AQECVC
Trigger: ACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAAC...GTGTGTCTTTGCACACACAGTGCAGCGGGAACGGTGGGGCTGGCTGGTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS TCA 90 bp GTACTGCACGTGGAGTCTGCAGTCCAGCCAAGGGCACTGCTTTCCTaGAACAGGGGATTCCTTCCATGCAGGCATGGGCTTGTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: VLHVESAVQPRALLS*NRGFLPCRHGLVLG
Trigger: TCCAAGAACAAGCCCATGCCTGCATGGAAGGAATCCCCTGTTTCAGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 90 bp AGGATCACCACACCCATGTCTCTGGTCTGTACTGCACGTGGAGTCTaGAGTCCAGCCAAGGGCACTGCTTTCCTGAAACAGGGGATTCCT +
Preference number: 5 (lower is better)
Translates to: RITTPMSLVCTARGV*SPAKGTAFLKQGIP
Trigger: AGGAATCCCCTGTTTCAGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTACAGACCAGAGACATGGGTGTGGTGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 90 bp AAAAGGCAGGATCACCACACCCATGTCTCTGGTCTGTACTGCACGTaGAGTCTGCAGTCCAGCCAAGGGCACTGCTTTCCTGAAACAGGG +
Preference number: 5 (lower is better)
Translates to: KRQDHHTHVSGLYCT*SLQSSQGHCFPETG
Trigger: CCCTGTTTCAGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTACAGACCAGAGACATGGGTGTGGTGATCCTGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 90 bp CCCTCCCAGCTTCCACAACACATGGATCTTAGGCCCATCTCCTCGTaGTTCCCTCTGCCTGAAGTACACGTCCCCAGTCCTGCAAAAGTA +
Preference number: 5 (lower is better)
Translates to: PSQLPQHMDLRPISS*FPLPEVHVPSPAKV
Trigger: TACTTTTGCAGGACTGGGGACGTGTACTTCAGGCAGAGGGAACCACGAGGAGATGGGCCTAAGATCCATGTGTTGTGGAAGCTGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS-3UTR CAA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCGAATGCACCATGCACTaGGGTGCGCCCGTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSECTMH*GAPVVP
Trigger: GGGCACCACGGGCGCACCCAAGTGCATGGTGCATTC...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS TCA 90 bp GCTACTGACACTCCTACACAGTCACTGAACCCACATGAGGCGTTCTaGACAGCACCTGACCCCCAGCAGTATGACAGCAGCCATTGCACA +
Preference number: 5 (lower is better)
Translates to: ATDTPTQSLNPHEAF*TAPDPQQYDSSHCT
Trigger: TGTGCAATGGCTGCTGTCATACTGCTGGGGGTCAGGTGCTGTTCAGAACGCCTCATGTGGGTTCAGTGACTGTGTAGGAGTGTCAGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538851.5
CDS GCA 90 bp AAGAGACTGCCATCTGCAAACATGGGTAGCCATCGCCCAGATGGCTaGTATTCCCTCGCACATGAGCCTGATGCAAGCAGTTCAAGACCA +
Preference number: 5 (lower is better)
Translates to: KRLPSANMGSHRPDG*YSLAHEPDASSSRP
Trigger: TGGTCTTGAACTGCTTGCATCAGGCTCATGTGCGAGGGAATAGCAGCCATCTGGGCGATGGCTACCCATGTTTGCAGATGGCAGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 90 bp CATCTTAAAAGGCAGGATCACCACACCCATGTCTCTGGTCTGTACTaGACGTGGAGTCTGCAGTCCAGCCAAGGGCACTGCTTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: HLKRQDHHTHVSGLY*TWSLQSSQGHCFPE
Trigger: TTCAGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTACAGACCAGAGACATGGGTGTGGTGATCCTGCCTTTTAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 90 bp TGGCATCCACAATCAAAGGATGGACTGCAGTGGGAGTCCAGCCCCTaGGGTGTCGGGCTAAATGAAGTGGCTAACATGATTCTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: WHPQSKDGLQWESSP*GVGLNEVANMILLD
Trigger: ATCCAGCAGAATCATGTTAGCCACTTCATTTAGCCCGACACCCCAGGGGCTGGACTCCCACTGCAGTCCATCCTTTGATTGTGGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS CCA 90 bp GTCAATTCTCCACAGATGGGCACGTACCCGTTTCTGCTTTATCTGTaGCATCCACAATCAAAGGATGGACTGCAGTGGGAGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: VNSPQMGTYPFLLYL*HPQSKDGLQWESSP
Trigger: GGGGCTGGACTCCCACTGCAGTCCATCCTTTGATTGTGGATGCCACAGATAAAGCAGAAACGGGTACGTGCCCATCTGTGGAGAATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS-3UTR CAA 90 bp TTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGATCCACTTTCTTGCCGTaGAGCGTATACGGGATGCCC +
Preference number: 5 (lower is better)
Translates to: LHLHRAKWDNGTGRLKTRSTFLP*SVYGMP
Trigger: GGGCATCCCGTATACGCTCAACGGCAAGAAAGTGGA...TCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS GCA 90 bp GTAAAGGGCAACTCTGTCATTCTCTTTGTGCCGCAGGAGGTTTTCTaGATAGTTGAGCCGACTGCCTTTGAACCACTCGGGGACATCTGC +
Preference number: 5 (lower is better)
Translates to: VKGNSVILFVPQEVF*IVEPTAFEPLGDIC
Trigger: GCAGATGTCCCCGAGTGGTTCAAAGGCAGTCGGCTCAACTATGCAGAAAACCTCCTGCGGCACAAAGAGAATGACAGAGTTGCCCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS GCA 90 bp CACTTCCCTCCTGGCCATCCTCAAGGTTACACTGTGTTAAGAGACTaGCATCTGCAAACATGGGTAGCCATCGCCCAGATGGCTGCTATT +
Preference number: 5 (lower is better)
Translates to: HFPPGHPQGYTVLRD*HLQTWVAIAQMAAI
Trigger: AATAGCAGCCATCTGGGCGATGGCTACCCATGTTTGCAGATGGCAGTCTCTTAACACAGTGTAACCTTGAGGATGGCCAGGAGGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 90 bp TTTCTGCTTTATCTGTGGCATCCACAATCAAAGGATGGACTGCAGTaGGAGTCCAGCCCCTGGGGTGTCGGGCTAAATGAAGTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: FLLYLWHPQSKDGLQ*ESSPWGVGLNEVAN
Trigger: GTTAGCCACTTCATTTAGCCCGACACCCCAGGGGCTGGACTCCCACTGCAGTCCATCCTTTGATTGTGGATGCCACAGATAAAGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS CCA 90 bp CATCCTCAAGGTTACACTGTGTTAAGAGACTGCCATCTGCAAACATaGGTAGCCATCGCCCAGATGGCTGCTATTCCCTCGCACATGAGC +
Preference number: 5 (lower is better)
Translates to: HPQGYTVLRDCHLQT*VAIAQMAAIPSHMS
Trigger: GCTCATGTGCGAGGGAATAGCAGCCATCTGGGCGATGGCTACCCATGTTTGCAGATGGCAGTCTCTTAACACAGTGTAACCTTGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS-3UTR CAA 90 bp AGATCCAGGTACCCACCAGATTTAACAAAACAGAGAAACGATCCCTCCCCAAGCAGCACTGACAGCCACTaGGCCCCAGTTACCAGGACA +
Preference number: 5 (lower is better)
Translates to: RSRYPPDLTKQRNDPSPSSTDSH*APVTRT
Trigger: TGTCCTGGTAACTGGGGCCAAGTGGCTGTCAGTGCT...GCTTGGGGAGGGATCGTTTCTCTGTTTTGTTAAATCTGGTGGGTACCTGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp GGAAGAAAGGGATTTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGACTCTGTCATTCTCTTaGTGCCGCAGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GRKGFAPSQSKMGQRDGETLSFS*CRRRFS
Trigger: AGAAAACCTCCTGCGGCACAAAGAGAATGACAGAGT...CTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp TTGCACCTTCACAGAGCAAAATGGGACAACGGGACGGGGAGGTTGAAGACAAGAGAGCTTTGGCTGAATTaGAGAAAACCGGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LHLHRAKWDNGTGRLKTRELWLN*RKPVQH
Trigger: GTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTC...TCTTGTCTTCAACCTCCCCGTCCCGTTGTCCCATTTTGCTCTGTGAAGGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS TCA 90 bp GGTTGTGCTCTTTGCCATTATAGACAACAGCCTCCACAGAGAAGATaGGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GCALCHYRQQPPQRR*ALAEFEKTGPAHPG
Trigger: CCCAGGGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGGCTGTTGTCTATAATGGCAAAGAGCACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537564.5
CDS GCA 90 bp AGCTGTAGGTTTCTGTATAATTTCTTGAGCACACAAAAGTTACAGTaGACACGGGTGCGGCTGAGTGACACGCCAGCCAGTCTGACTCAG +
Preference number: 5 (lower is better)
Translates to: SCRFLYNFLSTQKLQ*TRVRLSDTPASLTQ
Trigger: CTGAGTCAGACTGGCTGGCGTGTCACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATTATACAGAAACCTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000543665.2
ENST00000545511.5
CDS TCA 90 bp CATGGCCTCCATCCATACACCTGGGGCACAAAATCCGAGGTTGCATaGAAGAAAGCCAGCGCTCTGGCACCTGGTTATAATTTATTAAGG +
Preference number: 5 (lower is better)
Translates to: HGLHPYTWGTKSEVA*KKASALAPGYNLLR
Trigger: CCTTAATAAATTATAACCAGGTGCCAGAGCGCTGGCTTTCTTTCATGCAACCTCGGATTTTGTGCCCCAGGTGTATGGATGGAGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS GCA 90 bp CTTCACAGCACAGGCTCTCCACCCTGGCTGCCTGGTAGCACCGCCTaGAGTGGGACTATTAAGTTAATTAAGCTCATTAGGATAACTAAT +
Preference number: 5 (lower is better)
Translates to: LHSTGSPPWLPGSTA*SGTIKLIKLIRITN
Trigger: ATTAGTTATCCTAATGAGCTTAATTAACTTAATAGTCCCACTGCAGGCGGTGCTACCAGGCAGCCAGGGTGGAGAGCCTGTGCTGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS-3UTR CAA 90 bp CAGAACACTTGGTGCGAGCATCCTTTTACAACAGCTGTAGGTTTCTGTATAATTAGATGGCACCAATGCTaGCCGCAGCCAGCATCGCCT +
Preference number: 5 (lower is better)
Translates to: QNTWCEHPFTTAVGFCIIRWHQC*PQPASP
Trigger: AGGCGATGCTGGCTGCGGCAAGCATTGGTGCCATCT...AATTATACAGAAACCTACAGCTGTTGTAAAAGGATGCTCGCACCAAGTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp GGGGAGGTTGAAGACAAGACCTTGGCTCAGGAGTGTGTCTGTCTTCAGCACCAGCCAGAAACACACTGTTaGGAATCTTTGAAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: GEVEDKTLAQECVCLQHQPETHC*ESLKGL
Trigger: TAGACCTTTCAAAGATTCCAAACAGTGTGTTTCTGG...CTGGTGCTGAAGACAGACACACTCCTGAGCCAAGGTCTTGTCTTCAACCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS TCA 90 bp GGTTGTGCTCTTTGCCATTATAGACAACAGCCTCCACAGAGAAGATaGGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCCTGAA +
Preference number: 5 (lower is better)
Translates to: GCALCHYRQQPPQRR*ALAEFEKTGPAHPE
Trigger: TTCAGGGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAGGCTGTTGTCTATAATGGCAAAGAGCACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 90 bp AGCCACAGGTTGGTGCTAACTTCCCATTTCAAATGCAGGACACTCTaGCCCGGCAACTCCACATCTAAGAATGGATCACACAGACATATT +
Preference number: 5 (lower is better)
Translates to: SHRLVLTSHFKCRTL*PGNSTSKNGSHRHI
Trigger: AATATGTCTGTGTGATCCATTCTTAGATGTGGAGTTGCCGGGCCAGAGTGTCCTGCATTTGAAATGGGAAGTTAGCACCAACCTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538851.5
CDS-3UTR CAA 90 bp CCACCTGCTGCAGCTTTTCCATGTGGTTGTGCTCTTTGCCATTATAGACAACAGACTCTGTCATTCTCTTaGTGCCGCAGGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PPAAAFPCGCALCHYRQQTLSFS*CRRRFS
Trigger: AGAAAACCTCCTGCGGCACAAAGAGAATGACAGAGT...CTGTTGTCTATAATGGCAAAGAGCACAACCACATGGAAAAGCTGCAGCAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CAA 90 bp CTCCACAGAGAAGATGAGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCCCTGTTTCCAGTGGTTaGGTTTCTTGTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: LHREDELWLNLRKPVQHTPVSSG*VSCADL
Trigger: CAAATCAGCACAAGAAACCAAACCACTGGAAACAGG...GGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CAA 90 bp CCACCTGCTGCAGCTTTTCCATGTGGTTGTGCTCTTTGCCATTATAGACAACAGTTCACAATTTCCTCTTaGCCTTCCCCAGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: PPAAAFPCGCALCHYRQQFTISS*PSPAPY
Trigger: ATATGGGGCTGGGGAAGGCAAAGAGGAAATTGTGAA...CTGTTGTCTATAATGGCAAAGAGCACAACCACATGGAAAAGCTGCAGCAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CAA 90 bp CACTGTTGGGTAAATAACCAACAACCCGATCTCCTTTCTTCACACCCATTTTCCGAGCTTTGGCTGAATTaGAGAAAACCGGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: HCWVNNQQPDLLSSHPFSELWLN*RKPVQH
Trigger: GTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTC...GGAAAATGGGTGTGAAGAAAGGAGATCGGGTTGTTGGTTATTTACCCAACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS-3UTR CAA 90 bp CTGTATAATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTAGGGAAGAAAGGGATTaGCACCTTCACAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: LYNFLSTQKLQCTRVRLSREERD*HLHRAK
Trigger: TTTTGCTCTGTGAAGGTGCAAATCCCTTTCTTCCCT...ACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATTATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp CTCCACAGAGAAGATGAGCTTTGGCTGAATTTGAGAAAACCGGTCCAGCACACCCCAGAAACACACTGTTaGGAATCTTTGAAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: LHREDELWLNLRKPVQHTPETHC*ESLKGL
Trigger: TAGACCTTTCAAAGATTCCAAACAGTGTGTTTCTGG...GGTGTGCTGGACCGGTTTTCTCAAATTCAGCCAAAGCTCATCTTCTCTGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS TCA 90 bp ATGTGTCCACAACCTCATCATACACACGTGAGAAGACAATTCCACTaGATTTCCAGAACTCTGCCCAGAAGTCTGAATATGACTCAACGG +
Preference number: 5 (lower is better)
Translates to: MCPQPHHTHVRRQFH*ISRTLPRSLNMTQR
Trigger: CCGTTGAGTCATATTCAGACTTCTGGGCAGAGTTCTGGAAATTCAGTGGAATTGTCTTCTCACGTGTGTATGATGAGGTTGTGGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS GCA 90 bp TTCACACCCATTTTCCTCATTGCTGCTGCAAACAAAGCCACTTCTTaGCTCAGCTCTTCAAAAGTCACCTTCACAATTTCCTCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: FTPIFLIAAANKATS*LSSSKVTFTISSLP
Trigger: AGGCAAAGAGGAAATTGTGAAGGTGACTTTTGAAGAGCTGAGGCAAGAAGTGGCTTTGTTTGCAGCAGCAATGAGGAAAATGGGTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS CCA 90 bp TCTTCCAAAGAGGCCACAACAGCAAAGCAAAGTGGCCCCATATTTTaGTTCTCGGAATCTTCAATTAAAGAGGAACCTGAATCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSKEATTAKQSGPIF*FSESSIKEEPESSK
Trigger: CTTGGAGGATTCAGGTTCCTCTTTAATTGAAGATTCCGAGAACCAAAATATGGGGCCACTTTGCTTTGCTGTTGTGGCCTCTTTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 90 bp TTCTCGGAATCTTCAATTAAAGAGGAACCTGAATCCTCCAAGCAGTaGATTTATGCCAACCAATGGCATAAGCCTACACGTGCATACACT +
Preference number: 5 (lower is better)
Translates to: FSESSIKEEPESSKQ*IYANQWHKPTRAYT
Trigger: AGTGTATGCACGTGTAGGCTTATGCCATTGGTTGGCATAAATGCACTGCTTGGAGGATTCAGGTTCCTCTTTAATTGAAGATTCCGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS-3UTR CAA 90 bp CTGTATAATTTCTTGAGCACACAAAAGTTACAGTGCACACGGGTGCGGCTGAGTCACTGTTTGGAATCTTaGAAAGGTCTATGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LYNFLSTQKLQCTRVRLSHCLES*KGLCSL
Trigger: GAGAGAACATAGACCTTTCAAAGATTCCAAACAGTG...ACTCAGCCGCACCCGTGTGCACTGTAACTTTTGTGTGCTCAAGAAATTATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316519.11
CDS-3UTR CAA 90 bp TGTTCTCTCTGGAGGACACATAAGGAATCACCACCACTTTCTTCAAGTCTGGTAGTTTCTTGTGCTGATTaGCAATGTAAAGGGCAACTC +
Preference number: 5 (lower is better)
Translates to: CSLWRTHKESPPLSSSLVVSCAD*QCKGQL
Trigger: GAGTTGCCCTTTACATTGCAAATCAGCACAAGAAAC...TACCAGACTTGAAGAAAGTGGTGGTGATTCCTTATGTGTCCTCCAGAGAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS TCA 90 bp TCACTCTGGTTCATTCGTATTCACCACTTGGGCATTCTCCACATGTaGTCACAGAGTTTCTTCCTCTCAAAGATGGACATTTCTATTGTT +
Preference number: 5 (lower is better)
Translates to: SLWFIRIHHLGILHM*SQSFFLSKMDISIV
Trigger: AACAATAGAAATGTCCATCTTTGAGAGGAAGAAACTCTGTGATCACATGTGGAGAATGCCCAAGTGGTGAATACGAATGAACCAGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS-3UTR CAA 90 bp TGGGTAAATAACCAACAACCCGATCTCCTTTCTTCACACCCATTTTCCTCATTGCACTGTTTGGAATCTTaGAAAGGTCTATGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: WVNNQQPDLLSSHPFSSLHCLES*KGLCSL
Trigger: GAGAGAACATAGACCTTTCAAAGATTCCAAACAGTG...CAATGAGGAAAATGGGTGTGAAGAAAGGAGATCGGGTTGTTGGTTATTTACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS TCA 90 bp ATTCACTTGGAATCCACATATAATACACCCATATATATACATACATaGGTGTGCATGTACACATCCATATATACCTGTTTTCCACCTGCA +
Preference number: 5 (lower is better)
Translates to: IHLESTYNTPIYIHT*VCMYTSIYTCFPPA
Trigger: TGCAGGTGGAAAACAGGTATATATGGATGTGTACATGCACACTCATGTATGTATATATATGGGTGTATTATATGTGGATTCCAAGTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536118.5
CDS GCA 72 bp AGTGGGTGGCTGAAGGGCAGCTGCTCGAACTCCAGCTaGGGGGCCTGCTCACTGGTGCCGGTGGCAAGAAAG +
Preference number: 6 (lower is better)
Translates to: SGWLKGSCSNSS*GACSLVPVARK
Trigger: CTTTCTTGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCACCCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS GCA 72 bp CAGGCGGCGCCCACAGCCGCCCGGAAGCGGTCCATCTaGGTGTTCTTCTTACTGTCAGGCTCCCACATCACC +
Preference number: 6 (lower is better)
Translates to: QAAPTAARKRSI*VFFLLSGSHIT
Trigger: GGTGATGTGGGAGCCTGACAGTAAGAAGAACACGCAGATGGACCGCTTCCGGGCGGCTGTGGGCGCCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS GCA 72 bp CTGAACCCAGCAGGGCTCCATCATCAGCCCAGCTGGTaGTGCGGCCTGATGCACGGCTGGCCAGTCTCACTC +
Preference number: 6 (lower is better)
Translates to: LNPAGLHHQPSW*CGLMHGWPVSL
Trigger: GAGTGAGACTGGCCAGCCGTGCATCAGGCCGCAGCACCAGCTGGGCTGATGATGGAGCCCTGCTGGGTTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537564.5
CDS TCA 72 bp GTGCTTCAGGCGACAGAGCCCACCGCGGCCGCACAATaGCAGGCAGGATCACTGAGAGCTGACTGTGCACGC +
Preference number: 6 (lower is better)
Translates to: VLQATEPTAAAQ*QAGSLRADCAR
Trigger: GCGTGCACAGTCAGCTCTCAGTGATCCTGCCTGTCATTGTGCGGCCGCGGTGGGCTCTGTCGCCTGAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS TCA 72 bp AGCCCACCGCGGCCGCACAATGACAGGCAGGATCACTaGGAGCTGACTGTGCACGCTTTGCAGAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SPPRPHNDRQDH*ELTVHALQSSS
Trigger: GCTGCTGCTCTGCAAAGCGTGCACAGTCAGCTCTCAGTGATCCTGCCTGTCATTGTGCGGCCGCGGTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS GCA 72 bp CTGAAGGGCAGCTGCTCGAACTCCAGCTGCGGGGCCTaGTCACTGGTGCCGGTGGCAAGAAAGTCATCCAGA +
Preference number: 6 (lower is better)
Translates to: LKGSCSNSSCGA*SLVPVARKSSR
Trigger: TCTGGATGACTTTCTTGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS CCA 72 bp CCCGTGGTGCCCGATGAGAACATGATGAACAGTGGGTaGCTGAAGGGCAGCTGCTCGAACTCCAGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: PVVPDENMMNSG*LKGSCSNSSCG
Trigger: CCCGCAGCTGGAGTTCGAGCAGCTGCCCTTCAGCCACCCACTGTTCATCATGTTCTCATCGGGCACCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS CCA 72 bp TGCGTGTTCTTCTTACTGTCAGGCTCCCACATCACCTaGCACTCCAGGATCTCCTCCCGACCGGGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: CVFFLLSGSHIT*HSRISSRPGRS
Trigger: GGAGCGCCCCGGTCGGGAGGAGATCCTGGAGTGCCAGGTGATGTGGGAGCCTGACAGTAAGAAGAACACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS CAA 72 bp TGGATGAGGGTGCCCCCAGCGGAATGCACCATGCACTaGGGTGCGCCCGTGGTGCCCGATGAGAACATGATG +
Preference number: 6 (lower is better)
Translates to: WMRVPPAECTMH*GAPVVPDENMM
Trigger: CATCATGTTCTCATCGGGCACCACGGGCGCACCCAAGTGCATGGTGCATTCCGCTGGGGGCACCCTCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
CDS TCA 72 bp TCGAGGACTCTCGAGGACTCCCTGACCCCAGGTCTCTaGCAGCACTCCTCAGAGCCTGAGGTTGGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: SRTLEDSLTPGL*QHSSEPEVGLC
Trigger: ACAGAGGCCAACCTCAGGCTCTGAGGAGTGCTGTCAGAGACCTGGGGTCAGGGAGTCCTCGAGAGTCCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS CCA 72 bp GCAGCTGCTCGAACTCCAGCTGCGGGGCCTGCTCACTaGTGCCGGTGGCAAGAAAGTCATCCAGAAACACAC +
Preference number: 6 (lower is better)
Translates to: AAARTPAAGPAH*CRWQESHPETH
Trigger: GTGTGTTTCTGGATGACTTTCTTGCCACCGGCACCAGTGAGCAGGCCCCGCAGCTGGAGTTCGAGCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS CAA 90 bp TTCAGATGCTGGATGAGGGTGCCCCCAGCGGAATGCACCATGCACTaGGGTGCGCCCGTGGTGCCCGATGAGAACATGATGAACAGTGGG +
Preference number: 6 (lower is better)
Translates to: FRCWMRVPPAECTMH*GAPVVPDENMMNSG
Trigger: CCCACTGTTCATCATGTTCTCATCGGGCACCACGGGCGCACCCAAGTGCATGGTGCATTCCGCTGGGGGCACCCTCATCCAGCATCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
CDS TCA 72 bp ATGCACCATGCACTTGGGTGCGCCCGTGGTGCCCGATaGGAACATGATGAACAGTGGGTGGCTGAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: MHHALGCARGAR*EHDEQWVAEGQ
Trigger: CTGCCCTTCAGCCACCCACTGTTCATCATGTTCTCATCGGGCACCACGGGCGCACCCAAGTGCATGGTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316519.11
ENST00000316543.14
ENST00000441247.6
ENST00000537564.5
CDS TCA 72 bp ACACAGTACAGATCTACAAGGTGGCCACGCCCTCCCTaGACCCAGCAGGGCTCCATCATCAGCCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: TQYRSTRWPRPP*TQQGSIISPAG
Trigger: ACCAGCTGGGCTGATGATGGAGCCCTGCTGGGTTCAGGGAGGGCGTGGCCACCTTGTAGATCTGTACTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537564.5
CDS TCA 72 bp AATGCCAAGACCTCTCGAGGACTCTCGAGGACTCCCTaGCCCCAGGTCTCTGACAGCACTCCTCAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: NAKTSRGLSRTP*PQVSDSTPQSL
Trigger: CAGGCTCTGAGGAGTGCTGTCAGAGACCTGGGGTCAGGGAGTCCTCGAGAGTCCTCGAGAGGTCTTGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS GCA 72 bp AGGCAGGATCACCACACCCATGTCTCTGGTCTGTACTaGACGTGGAGTCTGCAGTCCAGCCAAGGGCACTGC +
Preference number: 6 (lower is better)
Translates to: RQDHHTHVSGLY*TWSLQSSQGHC
Trigger: GCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTACAGACCAGAGACATGGGTGTGGTGATCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 72 bp AGGGTGGCTCCCCCGGCCCCGTCAATTCTCCACAGATaGGCACGTACCCGTTTCTGCTTTATCTGTGGCATC +
Preference number: 6 (lower is better)
Translates to: RVAPPAPSILHR*ARTRFCFICGI
Trigger: GATGCCACAGATAAAGCAGAAACGGGTACGTGCCCATCTGTGGAGAATTGACGGGGCCGGGGGAGCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS CCA 72 bp GACTGCCATGATCTTTACCAACTGCACAGGGGCTGCTaGTCCTTCCCACGATGGCAGAAGGGAGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: DCHDLYQLHRGC*SFPRWQKGGPA
Trigger: AGCAGGGCCTCCCTTCTGCCATCGTGGGAAGGACCAGCAGCCCCTGTGCAGTTGGTAAAGATCATGGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS CCA 72 bp CCGCAGCCAGCATCGCCTCGACAGCGTGCTCACTGTTaGGTAAATAACCTCCTGCCTTTGCACAGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PQPASPRQRAHC*VNNLLPLHSCL
Trigger: CAGACAGCTGTGCAAAGGCAGGAGGTTATTTACCCAACAGTGAGCACGCTGTCGAGGCGATGCTGGCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537477.5
CDS TCA 72 bp GTGGAGTCTGCAGTCCAGCCAAGGGCACTGCTTTCCTaGAACAGGGGATTCCTTCCATGCAGGCATGGGCTT +
Preference number: 6 (lower is better)
Translates to: VESAVQPRALLS*NRGFLPCRHGL
Trigger: AAGCCCATGCCTGCATGGAAGGAATCCCCTGTTTCAGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS TCA 72 bp CTCATCCCACGGAAGACCGTCATAGCATTCGCTGTCTaGAGCCACGAGGCAACATGGCACAGAACATCCCGG +
Preference number: 6 (lower is better)
Translates to: LIPRKTVIAFAV*SHEATWHRTSR
Trigger: CCGGGATGTTCTGTGCCATGTTGCCTCGTGGCTTCAGACAGCGAATGCTATGACGGTCTTCCGTGGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS GCA 72 bp AGTAAGGACTTCACAGCACAGGCTCTCCACCCTGGCTaGCTGGTAGCACCGCCTGCAGTGGGACTATTAAGT +
Preference number: 6 (lower is better)
Translates to: SKDFTAQALHPG*LVAPPAVGLLS
Trigger: ACTTAATAGTCCCACTGCAGGCGGTGCTACCAGGCAGCCAGGGTGGAGAGCCTGTGCTGTGAAGTCCTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CCA 72 bp GATCACCACACCCATGTCTCTGGTCTGTACTGCACGTaGAGTCTGCAGTCCAGCCAAGGGCACTGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: DHHTHVSGLYCT*SLQSSQGHCFP
Trigger: AGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTACAGACCAGAGACATGGGTGTGGTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS TCA 72 bp TCACCAGGAATGTGCATCAGAAGTGCCCATGGGCTTTaGAAATACATGGAAGCCTGGGCCCCAGCCCCGGAA +
Preference number: 6 (lower is better)
Translates to: SPGMCIRSAHGL*KYMEAWAPAPE
Trigger: TTCCGGGGCTGGGGCCCAGGCTTCCATGTATTTTCAAAGCCCATGGGCACTTCTGATGCACATTCCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS TCA 72 bp ACTCCTACACAGTCACTGAACCCACATGAGGCGTTCTaGACAGCACCTGACCCCCAGCAGTATGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: TPTQSLNPHEAF*TAPDPQQYDSS
Trigger: GCTGCTGTCATACTGCTGGGGGTCAGGTGCTGTTCAGAACGCCTCATGTGGGTTCAGTGACTGTGTAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538851.5
CDS TCA 72 bp CCAGATCACAGGGCACGTATGCATCTTCAGCTTCACTaGCTCCTCCCACATTGCTCTGCAGAGCAGGTGCAC +
Preference number: 6 (lower is better)
Translates to: PDHRARMHLQLH*LLPHCSAEQVH
Trigger: GTGCACCTGCTCTGCAGAGCAATGTGGGAGGAGTCAGTGAAGCTGAAGATGCATACGTGCCCTGTGATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS GCA 72 bp CCATCTGCAAACATGGGTAGCCATCGCCCAGATGGCTaGTATTCCCTCGCACATGAGCCTGATGCAAGCAGT +
Preference number: 6 (lower is better)
Translates to: PSANMGSHRPDG*YSLAHEPDASS
Trigger: ACTGCTTGCATCAGGCTCATGTGCGAGGGAATAGCAGCCATCTGGGCGATGGCTACCCATGTTTGCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 72 bp ACACCCATGTCTCTGGTCTGTACTGCACGTGGAGTCTaGAGTCCAGCCAAGGGCACTGCTTTCCTGAAACAG +
Preference number: 6 (lower is better)
Translates to: TPMSLVCTARGV*SPAKGTAFLKQ
Trigger: CTGTTTCAGGAAAGCAGTGCCCTTGGCTGGACTGCAGACTCCACGTGCAGTACAGACCAGAGACATGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 72 bp TACACGCTGTCCTTCTATGTGTCCCGCATCTTCCTGTaGTCACTCAGCATGACATCTGGGCTCGTTCGGGCT +
Preference number: 6 (lower is better)
Translates to: YTLSFYVSRIFL*SLSMTSGLVRA
Trigger: AGCCCGAACGAGCCCAGATGTCATGCTGAGTGAGCACAGGAAGATGCGGGACACATAGAAGGACAGCGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS GCA 72 bp ACCTCAGCCTCCCAAGTAGCTAGAGCTACTGGTGTATaGCACCATGCCCAGCTGAGAGACAGGGTCTTGCTA +
Preference number: 6 (lower is better)
Translates to: TSASQVARATGV*HHAQLRDRVLL
Trigger: TAGCAAGACCCTGTCTCTCAGCTGGGCATGGTGGCATACACCAGTAGCTCTAGCTACTTGGGAGGCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS CCA 72 bp CCCGGAAGATGTGTCCCAGTAAGTCTCGGTGGGAACTaGACTGCCATGATCTTTACCAACTGCACAGGGGCT +
Preference number: 6 (lower is better)
Translates to: PGRCVPVSLGGN*TAMIFTNCTGA
Trigger: AGCCCCTGTGCAGTTGGTAAAGATCATGGCAGTCCAGTTCCCACCGAGACTTACTGGGACACATCTTCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS TCA 72 bp GGTGCACACTTGCTACTGACACTCCTACACAGTCACTaGACCCACATGAGGCGTTCTGAACAGCACCTGACC +
Preference number: 6 (lower is better)
Translates to: GAHLLLTLLHSH*THMRRSEQHLT
Trigger: GGTCAGGTGCTGTTCAGAACGCCTCATGTGGGTTCAGTGACTGTGTAGGAGTGTCAGTAGCAAGTGTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538851.5
CDS TCA 72 bp TCTATGTGTCCCGCATCTTCCTGTGCTCACTCAGCATaGCATCTGGGCTCGTTCGGGCTACTAGGTCTCACT +
Preference number: 6 (lower is better)
Translates to: SMCPASSCAHSA*HLGSFGLLGLT
Trigger: AGTGAGACCTAGTAGCCCGAACGAGCCCAGATGTCATGCTGAGTGAGCACAGGAAGATGCGGGACACATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS GCA 72 bp AAGATGTGTCCCAGTAAGTCTCGGTGGGAACTGGACTaGCATGATCTTTACCAACTGCACAGGGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: KMCPSKSRWELD*HDLYQLHRGCW
Trigger: CCAGCAGCCCCTGTGCAGTTGGTAAAGATCATGGCAGTCCAGTTCCCACCGAGACTTACTGGGACACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418937.6
CDS GCA 72 bp GCACTCCCACGCTCCCTTTCACAAGATCACGCTCCATaGACGCGCGCACACACTTTCACATACACTTTTGTG +
Preference number: 6 (lower is better)
Translates to: ALPRSLSQDHAP*TRAHTFTYTFV
Trigger: CACAAAAGTGTATGTGAAAGTGTGTGCGCGCGTGCATGGAGCGTGATCTTGTGAAAGGGAGCGTGGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS CCA 72 bp TATAATTTATTAAGGTCGGCAGGGTCCCACAGTCCATaGGACAGGCACCCGGGCCTGCCTGTGAAGAATCTG +
Preference number: 6 (lower is better)
Translates to: YNLLRSAGSHSP*DRHPGLPVKNL
Trigger: CAGATTCTTCACAGGCAGGCCCGGGTGCCTGTCCCATGGACTGTGGGACCCTGCCGACCTTAATAAATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS CCA 72 bp TATCTGTGGCATCCACAATCAAAGGATGGACTGCAGTaGGAGTCCAGCCCCTGGGGTGTCGGGCTAAATGAA +
Preference number: 6 (lower is better)
Translates to: YLWHPQSKDGLQ*ESSPWGVGLNE
Trigger: TTCATTTAGCCCGACACCCCAGGGGCTGGACTCCCACTGCAGTCCATCCTTTGATTGTGGATGCCACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS GCA 72 bp ACAGGCTCTCCACCCTGGCTGCCTGGTAGCACCGCCTaGAGTGGGACTATTAAGTTAATTAAGCTCATTAGG +
Preference number: 6 (lower is better)
Translates to: TGSPPWLPGSTA*SGTIKLIKLIR
Trigger: CCTAATGAGCTTAATTAACTTAATAGTCCCACTGCAGGCGGTGCTACCAGGCAGCCAGGGTGGAGAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 72 bp CCTGGCCATCCTCAAGGTTACACTGTGTTAAGAGACTaGCATCTGCAAACATGGGTAGCCATCGCCCAGATG +
Preference number: 6 (lower is better)
Translates to: PGHPQGYTVLRD*HLQTWVAIAQM
Trigger: CATCTGGGCGATGGCTACCCATGTTTGCAGATGGCAGTCTCTTAACACAGTGTAACCTTGAGGATGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 72 bp TTCTGGGAGTGGCATTCCCAGATCACAGGGCACGTATaGATCTTCAGCTTCACTGACTCCTCCCACATTGCT +
Preference number: 6 (lower is better)
Translates to: FWEWHSQITGHV*IFSFTDSSHIA
Trigger: AGCAATGTGGGAGGAGTCAGTGAAGCTGAAGATGCATACGTGCCCTGTGATCTGGGAATGCCACTCCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS CCA 72 bp CCACAGATGGGCACGTACCCGTTTCTGCTTTATCTGTaGCATCCACAATCAAAGGATGGACTGCAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: PQMGTYPFLLYL*HPQSKDGLQWE
Trigger: CTCCCACTGCAGTCCATCCTTTGATTGTGGATGCCACAGATAAAGCAGAAACGGGTACGTGCCCATCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS CCA 72 bp GGTTACACTGTGTTAAGAGACTGCCATCTGCAAACATaGGTAGCCATCGCCCAGATGGCTGCTATTCCCTCG +
Preference number: 6 (lower is better)
Translates to: GYTVLRDCHLQT*VAIAQMAAIPS
Trigger: CGAGGGAATAGCAGCCATCTGGGCGATGGCTACCCATGTTTGCAGATGGCAGTCTCTTAACACAGTGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS GCA 72 bp GTTGAGCCGACTGCCTTTGAACCACTCGGGGACATCTaGGATTCCTTTCGATGTGTCCACAACCTCATCATA +
Preference number: 6 (lower is better)
Translates to: VEPTAFEPLGDI*DSFRCVHNLII
Trigger: TATGATGAGGTTGTGGACACATCGAAAGGAATCGCAGATGTCCCCGAGTGGTTCAAAGGCAGTCGGCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS GCA 72 bp AACTCTGTCATTCTCTTTGTGCCGCAGGAGGTTTTCTaGATAGTTGAGCCGACTGCCTTTGAACCACTCGGG +
Preference number: 6 (lower is better)
Translates to: NSVILFVPQEVF*IVEPTAFEPLG
Trigger: CCCGAGTGGTTCAAAGGCAGTCGGCTCAACTATGCAGAAAACCTCCTGCGGCACAAAGAGAATGACAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS CAA 90 bp CCCTCCCTGTGTGCTCCCCAAAATCGCTGTCTCGGACGTAGTGATTaGTTATTCCCATGTGTGTTAACATTTCTGCTCCATCCACACGCA +
Preference number: 6 (lower is better)
Translates to: PSLCAPQNRCLGRSD*LFPCVLTFLLHPHA
Trigger: TGCGTGTGGATGGAGCAGAAATGTTAACACACATGGGAATAACAAATCACTACGTCCGAGACAGCGATTTTGGGGAGCACACAGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS TCA 72 bp CATCCATACACCTGGGGCACAAAATCCGAGGTTGCATaGAAGAAAGCCAGCGCTCTGGCACCTGGTTATAAT +
Preference number: 6 (lower is better)
Translates to: HPYTWGTKSEVA*KKASALAPGYN
Trigger: ATTATAACCAGGTGCCAGAGCGCTGGCTTTCTTTCATGCAACCTCGGATTTTGTGCCCCAGGTGTATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS CAA 72 bp CCTGAAACAGGGGATTCCTTCCATGCAGGCATGGGCTaGTTCTTGGAACTCATAACATTCACTGACACTCCC +
Preference number: 6 (lower is better)
Translates to: PETGDSFHAGMG*FLELITFTDTP
Trigger: GGGAGTGTCAGTGAATGTTATGAGTTCCAAGAACAAGCCCATGCCTGCATGGAAGGAATCCCCTGTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CAA 90 bp TGCATCATGGCCTCCATCCATACACCTGGGGCACAAAATCCGAGGTaGCATGAAAGAAAGCCAGCGCTCTGGCACCTGGTTATAATTTAT +
Preference number: 6 (lower is better)
Translates to: CIMASIHTPGAQNPR*HERKPALWHLVIIY
Trigger: ATAAATTATAACCAGGTGCCAGAGCGCTGGCTTTCTTTCATGCAACCTCGGATTTTGTGCCCCAGGTGTATGGATGGAGGCCATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316543.14
CDS CCA 72 bp TTGGTGCTAACTTCCCATTTCAAATGCAGGACACTCTaGCCCGGCAACTCCACATCTAAGAATGGATCACAC +
Preference number: 6 (lower is better)
Translates to: LVLTSHFKCRTL*PGNSTSKNGSH
Trigger: GTGTGATCCATTCTTAGATGTGGAGTTGCCGGGCCAGAGTGTCCTGCATTTGAAATGGGAAGTTAGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538851.5
CDS CAA 90 bp TCACACATGTGCATGAAGATGTGTCACAGAATGTCTGTTGCACCCTaGCTGGTGACAGAGACAAAGCAATGTAGGTGTTATCGACACAAG +
Preference number: 6 (lower is better)
Translates to: SHMCMKMCHRMSVAP*LVTETKQCRCYRHK
Trigger: CTTGTGTCGATAACACCTACATTGCTTTGTCTCTGTCACCAGCAAGGGTGCAACAGACATTCTGTGACACATCTTCATGCACATGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538851.5
CDS TCA 72 bp AGATGTGTCACAGAATGTCTGTTGCACCCTTGCTGGTaGCAGAGACAAAGCAATGTAGGTGTTATCGACACA +
Preference number: 6 (lower is better)
Translates to: RCVTECLLHPCW*QRQSNVGVIDT
Trigger: TGTGTCGATAACACCTACATTGCTTTGTCTCTGTCACCAGCAAGGGTGCAACAGACATTCTGTGACACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538851.5
CDS CCA 72 bp TATGCAATATTCCAGACATATACAAAGGTACAGAGATaGTCCACGCCCACACACCTGTCACAGCAGCCTAAT +
Preference number: 6 (lower is better)
Translates to: YAIFQTYTKVQR*STPTHLSQQPN
Trigger: ATTAGGCTGCTGTGACAGGTGTGTGGGCGTGGACCATCTCTGTACCTTTGTATATGTCTGGAATATTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS CCA 72 bp GAGGCCACAACAGCAAAGCAAAGTGGCCCCATATTTTaGTTCTCGGAATCTTCAATTAAAGAGGAACCTGAA +
Preference number: 6 (lower is better)
Translates to: EATTAKQSGPIF*FSESSIKEEPE
Trigger: TTCAGGTTCCTCTTTAATTGAAGATTCCGAGAACCAAAATATGGGGCCACTTTGCTTTGCTGTTGTGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS CAA 72 bp TGTGCTCCCCAAAATCGCTGTCTCGGACGTAGTGATTaGTTATTCCCATGTGTGTTAACATTTCTGCTCCAT +
Preference number: 6 (lower is better)
Translates to: CAPQNRCLGRSD*LFPCVLTFLLH
Trigger: ATGGAGCAGAAATGTTAACACACATGGGAATAACAAATCACTACGTCCGAGACAGCGATTTTGGGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS TCA 72 bp CAACCTCATCATACACACGTGAGAAGACAATTCCACTaGATTTCCAGAACTCTGCCCAGAAGTCTGAATATG +
Preference number: 6 (lower is better)
Translates to: QPHHTHVRRQFH*ISRTLPRSLNM
Trigger: CATATTCAGACTTCTGGGCAGAGTTCTGGAAATTCAGTGGAATTGTCTTCTCACGTGTGTATGATGAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316519.11
ENST00000418937.6
CDS GCA 72 bp TCTTCAATTAAAGAGGAACCTGAATCCTCCAAGCAGTaGATTTATGCCAACCAATGGCATAAGCCTACACGT +
Preference number: 6 (lower is better)
Translates to: SSIKEEPESSKQ*IYANQWHKPTR
Trigger: ACGTGTAGGCTTATGCCATTGGTTGGCATAAATGCACTGCTTGGAGGATTCAGGTTCCTCTTTAATTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441247.6
CDS TCA 72 bp TTCATTCGTATTCACCACTTGGGCATTCTCCACATGTaGTCACAGAGTTTCTTCCTCTCAAAGATGGACATT +
Preference number: 6 (lower is better)
Translates to: FIRIHHLGILHM*SQSFFLSKMDI
Trigger: AATGTCCATCTTTGAGAGGAAGAAACTCTGTGATCACATGTGGAGAATGCCCAAGTGGTGAATACGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS CAA 90 bp AGAGTTTCTTCCTCTCAAAGATGGACATTTCTATTGTTCCCAATTTaGTTTTCCATTACAAATCATGGGGCGCTACAAACATTCTTGCAT +
Preference number: 6 (lower is better)
Translates to: RVSSSQRWTFLLFPI*FSITNHGALQTFLH
Trigger: ATGCAAGAATGTTTGTAGCGCCCCATGATTTGTAATGGAAAACAAAATTGGGAACAATAGAAATGTCCATCTTTGAGAGGAAGAAACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543665.2
CDS CAA 90 bp AAACAAGATCACATTTTTATGAAACTTAGAAAAGTCCAGCTCTTCTaGAACATTCAGAATCCACCGTTCTATGCATTTGTGCTCACAGAA +
Preference number: 6 (lower is better)
Translates to: KQDHIFMKLRKVQLF*NIQNPPFYAFVLTE
Trigger: TTCTGTGAGCACAAATGCATAGAACGGTGGATTCTGAATGTTCAAGAAGAGCTGGACTTTTCTAAGTTTCATAAAAATGTGATCTTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545511.5
CDS CAA 72 bp CACATTTTTATGAAACTTAGAAAAGTCCAGCTCTTCTaGAACATTCAGAATCCACCGTTCTATGCATTTGTG +
Preference number: 6 (lower is better)
Translates to: HIFMKLRKVQLF*NIQNPPFYAFV
Trigger: CACAAATGCATAGAACGGTGGATTCTGAATGTTCAAGAAGAGCTGGACTTTTCTAAGTTTCATAAAAATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545511.5