RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for A1CF (Homo sapiens)

Ensembl gene IDs: ENSG00000148584

Ensembl transcript IDs: ENST00000282641.6, ENST00000373993.5, ENST00000373995.7, ENST00000373997.8, ENST00000374001.6, ENST00000395489.6, ENST00000395495.5, ENST00000414883.1, ENST00000473480.5, ENST00000493415.5

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGTGAGCCAGAGGTAAGACTCTGGAGTTTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAGGTCTGCTCCATCCCTCCCAAATCT +
Preference number: 1 (lower is better)
Translates to: SCEPEVRLWSLLGFP*LLLTAQVCSIPPKS
Trigger: AGATTTGGGAGGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAAACTCCAGAGTCTTACCTCTGGCTCACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR GCA 90 bp GGTAAGACTCTGGAGTTTACTTGGCTTCCCTTGATTATTACTGACTaGCCAGGTCTGCTCCATCCCTCCCAAATCTTGCCAGCTACAAGA +
Preference number: 1 (lower is better)
Translates to: GKTLEFTWLPLIITD*PGLLHPSQILPATR
Trigger: TCTTGTAGCTGGCAAGATTTGGGAGGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAAACTCCAGAGTCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 90 bp GAAAACCAGAATGTATTGTCACCTCAGAGAGACATTGGTAAACCCTaGATGGGGCTGATATTCTTCATTCTCCAAGAAGGCCTGTGGGCA +
Preference number: 1 (lower is better)
Translates to: ENQNVLSPQRDIGKP*MGLIFFILQEGLWA
Trigger: TGCCCACAGGCCTTCTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTGACAATACATTCTGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 90 bp ATGTATTGTCACCTCAGAGAGACATTGGTAAACCCTGAATGGGGCTaGTATTCTTCATTCTCCAAGAAGGCCTGTGGGCAGCTTACTTTT +
Preference number: 1 (lower is better)
Translates to: MYCHLRETLVNPEWG*YSSFSKKACGQLTF
Trigger: AAAAGTAAGCTGCCCACAGGCCTTCTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTGACAATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 90 bp TCAAGACAAAAGGACTCAGGTATGGTGAAGCTGCCTGATACTTACTaGAACAAAAAGGAAGGAAAGTTAGAGGATTTCCTGGCAGATTTA +
Preference number: 1 (lower is better)
Translates to: SRQKDSGMVKLPDTY*NKKEGKLEDFLADL
Trigger: TAAATCTGCCAGGAAATCCTCTAACTTTCCTTCCTTTTTGTTTCAGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCTTTTGTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR GCA 90 bp AACACCCATGCTGATTGTCTGAAACAGTTTCTAATCAGCAATGATTaGTGTAAGATTTTTCTGTGGCAGCTTCAAGACAAAAGGACTCAG +
Preference number: 1 (lower is better)
Translates to: NTHADCLKQFLISND*CKIFLWQLQDKRTQ
Trigger: CTGAGTCCTTTTGTCTTGAAGCTGCCACAGAAAAATCTTACAGCAATCATTGCTGATTAGAAACTGTTTCAGACAATCAGCATGGGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 90 bp CTTCATAGGTTAGAATGCAATGAAAATTTACCCCGAATATTAACTTaGTTGCCCTTTATTCTACAAATGGCACACCTAAGAACCTCCCTG +
Preference number: 1 (lower is better)
Translates to: LHRLECNENLPRILT*LPFILQMAHLRTSL
Trigger: CAGGGAGGTTCTTAGGTGTGCCATTTGTAGAATAAAGGGCAATCAAGTTAATATTCGGGGTAAATTTTCATTGCATTCTAACCTATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTCCCTTGATTATTACTaGCTGCCCAGGTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: FHELRPAIMPHTVSHGECSLDYY*LPRSAP
Trigger: TGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTCCCTTGATTATTACTaGCTGCCCAGGTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSLDYY*LPRSAP
Trigger: TGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLLGFP*LLLTAQ
Trigger: CTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTCATGCCCCACACAGTaGGCCATGGTGAATGCATTT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSCPTQ*AMVNAF
Trigger: AAATGCATTCACCATGGCTCACTGTGTGGGGCATGA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGGAAGAACAACTTTTaGGGCAGTGGCTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLWKNNF*GSGSPA
Trigger: AGCTGGAGAGCCACTGCCCCAAAAGTTGTTCTTCCA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAGCTTCCCAAGTAGCTaGGACCACAGGCCCACGCCA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSFPSS*DHRPTP
Trigger: TGGCGTGGGCCTGTGGTCCCAGCTACTTGGGAAGCT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTGGACAGTCTTTCATaGGCTCAGGCCTGCAATCAT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLDSLS*AQACNH
Trigger: ATGATTGCAGGCCTGAGCTCATGAAAGACTGTCCAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTGGACAGTCTTTCATaGGCTCAGGCCTGCAATCAT +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLDSLS*AQACNH
Trigger: ATGATTGCAGGCCTGAGCTCATGAAAGACTGTCCAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGTGGACTAATGAGCTaGATAAACAATGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLCGLMS*INNGAW
Trigger: CCAGGCCCCATTGTTTATTCAGCTCATTAGTCCACA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGGACTCAGGTATGGTaGAGCTGCCTGATACTTACT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRTQVW*SCLILT
Trigger: AGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTGATTATTACTGACTaGCCAGGTCTGCTCCATCCC +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLIITD*PGLLHP
Trigger: GGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCCAGAGGTAAGACTCTaGAGTTTACTTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLPEVRL*SLLGFP
Trigger: AGGGAAGCCAAGTAAACTCCAGAGTCTTACCTCTGG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTCTCTGATTGCTAGATaGTGGGGTGGATACTGCAAC +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSLIAR*WGGYCN
Trigger: GTTGCAGTATCCACCCCACCATCTAGCAATCAGAGA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTCTCTGATTGCTAGATaGTGGGGTGGATACTGCAAC +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSLIAR*WGGYCN
Trigger: GTTGCAGTATCCACCCCACCATCTAGCAATCAGAGA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR CAA 90 bp TTGATTATTACTGACTGCCCAGGTCTGCTCCATCCCTCCCAAATCTaGCCAGCTACAAGATCTCTCTTCACCCTGGCAGGATTTGTAAAC +
Preference number: 2 (lower is better)
Translates to: LIITDCPGLLHPSQI*PATRSLFTLAGFVN
Trigger: GTTTACAAATCCTGCCAGGGTGAAGAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLLGFP*LLLTAQ
Trigger: CTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCCTTTTCCTCTTTGTaGCTTTGTGTATCACAAAAG +
Preference number: 2 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPFSSL*LCVSQK
Trigger: CTTTTGTGATACACAAAGTCACAAAGAGGAAAAGGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGGCTGAAGAGAGGTTaGAACCACAAAATCTTGGAC +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHRLKRG*NHKILD
Trigger: GTCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGAAGATCCTGATCTGTaGCAAATCGACTGGATGGAA +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLEDPDL*QIDWME
Trigger: TTCCATCCAGTCGATTTGTCACAGATCAGGATCTTC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATATCCCTCCCAAATCTTaGCAGCTACAAGATCTCTCT +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHIPPKS*QLQDLS
Trigger: AGAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGAT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATCCCTCCCAAATCTTaGCAGCTACAAGATCTCTCT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLIPPKS*QLQDLS
Trigger: AGAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAACACTCAGGAAGACTaGAAGAACAACTTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLNTQED*KNNFWG
Trigger: GCCCCAAAAGTTGTTCTTCCAGTCTTCCTGAGTGTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAACACTCAGGAAGACTaGAAGAACAACTTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHNTQED*KNNFWG
Trigger: GCCCCAAAAGTTGTTCTTCCAGTCTTCCTGAGTGTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTGATTGCTAGATGGTaGGGTGGATACTGCAACAAT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLIARW*GGYCNN
Trigger: ATTGTTGCAGTATCCACCCCACCATCTAGCAATCAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTGATTGCTAGATGGTaGGGTGGATACTGCAACAAT +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLIARW*GGYCNN
Trigger: ATTGTTGCAGTATCCACCCCACCATCTAGCAATCAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCACAGTGAGCCATGGTaGATGCATTTTGAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLHSEPW*MHFEKQ
Trigger: TTGCTTTTCAAAATGCATTCACCATGGCTCACTGTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATGGAATTTTCAGGCTaGAGAGAGGTTGAAACCACA +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLMEFSG*REVETT
Trigger: TGTGGTTTCAACCTCTCTTCAGCCTGAAAATTCCAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATATGGAATTTTCAGGCTaGAGAGAGGTTGAAACCACA +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHMEFSG*REVETT
Trigger: TGTGGTTTCAACCTCTCTTCAGCCTGAAAATTCCAT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAATGGTGTGATAACTTaGGATGGTGTTCCAGTGGTA +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLNGVIT*DGVPVV
Trigger: TACCACTGGAACACCATCTCAAGTTATCACACCATT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGACCCAATCCCATTGCTaGTCAATTTCCTCCTACTTA +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLTQSHC*SISSYL
Trigger: TAAGTAGGAGGAAATTGATCAGCAATGGGATTGGGT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATTCCCAAACCTAGGTaGACATTGAAATCACCTAGG +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLIPKPR*TLKSPR
Trigger: CCTAGGTGATTTCAATGTGCACCTAGGTTTGGGAAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGACTCAGTAGAAATTTaGCTGCCCCAATGGACATTT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLDSVEI*LPQWTF
Trigger: AAATGTCCATTGGGGCAGGCAAATTTCTACTGAGTC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTCCAGCAATCCTCCTaGCTTAGCTTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLQQSS*LSFPSS
Trigger: GCTACTTGGGAAGCTAAGGCAGGAGGATTGCTGGAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGACAAATCGACTGGATaGAATTTTCAGGCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLDKSTG*NFQAEE
Trigger: CTCTTCAGCCTGAAAATTCCATCCAGTCGATTTGTC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTCCCTTGATTATTACTaGCTGCCCAGGTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSLDYY*LPRSAP
Trigger: TGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTCATGCCCCACACAGTaGGCCATGGTGAATGCATTT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSCPTQ*AMVNAF
Trigger: AAATGCATTCACCATGGCTCACTGTGTGGGGCATGA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGGACAGGAAGATCCTaGTCTGTGACAAATCGACTG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGTGRS*SVTNRL
Trigger: CAGTCGATTTGTCACAGATCAGGATCTTCCTGTCCC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTGCCTGATACTTACTaGAACAAAAAGGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLPDTY*NKKEGK
Trigger: CTTTCCTTCCTTTTTGTTTCAGTAAGTATCAGGCAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGAAACCACAAAATCTTaGACAGTCTTTCATGAGCTC +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLETTKS*TVFHEL
Trigger: GAGCTCATGAAAGACTGTCCAAGATTTTGTGGTTTC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGAAACCACAAAATCTTaGACAGTCTTTCATGAGCTC +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHETTKS*TVFHEL
Trigger: GAGCTCATGAAAGACTGTCCAAGATTTTGTGGTTTC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCCACGCCACCACAACTaGCCAATTAAATTAAATTTG +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLPRHHN*PIKLNL
Trigger: CAAATTTAATTTAATTGGCCAGTTGTGGTGGCGTGG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTGGACAGTCTTTCATaGGCTCAGGCCTGCAATCAT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLDSLS*AQACNH
Trigger: ATGATTGCAGGCCTGAGCTCATGAAAGACTGTCCAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGTGGACTAATGAGCTaGATAAACAATGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLCGLMS*INNGAW
Trigger: CCAGGCCCCATTGTTTATTCAGCTCATTAGTCCACA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAGGACTCAGGTATGGTaGAGCTGCCTGATACTTACT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLRTQVW*SCLILT
Trigger: AGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTGATTATTACTGACTaGCCAGGTCTGCTCCATCCC +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLIITD*PGLLHP
Trigger: GGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCAACTTTTGGGGCAGTaGCTCTCCAGCTTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLQLLGQ*LSSFLL
Trigger: TAACAGAAAGCTGGAGAGCCACTGCCCCAAAAGTTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTCTCTGATTGCTAGATaGTGGGGTGGATACTGCAAC +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSLIAR*WGGYCN
Trigger: GTTGCAGTATCCACCCCACCATCTAGCAATCAGAGA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTGTAAGATTTTTCTGTaGCAGCTTCAAGACAAAAGG +
Preference number: 2 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHCKIFL*QLQDKR
Trigger: CCTTTTGTCTTGAAGCTGCCACAGAAAAATCTTACA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGTAAGATTTTTCTGTaGCAGCTTCAAGACAAAAGG +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLCKIFL*QLQDKR
Trigger: CCTTTTGTCTTGAAGCTGCCACAGAAAAATCTTACA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAACATAGTGTTGTTTaGCATGATACCAGATTGGAG +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKHSVV*HDTRLE
Trigger: CTCCAATCTGGTATCATGCCAAACAACACTATGTTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLLGFP*LLLTAQ
Trigger: CTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAGGCTGAAGAGAGGTTaGAACCACAAAATCTTGGAC +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLRLKRG*NHKILD
Trigger: GTCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGAAGATCCTGATCTGTaGCAAATCGACTGGATGGAA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLEDPDL*QIDWME
Trigger: TTCCATCCAGTCGATTTGTCACAGATCAGGATCTTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAACACTCAGGAAGACTaGAAGAACAACTTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLNTQED*KNNFWG
Trigger: GCCCCAAAAGTTGTTCTTCCAGTCTTCCTGAGTGTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAATCATTTACAAGTATaGCAAGAAAGTAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLNHLQV*QESSAF
Trigger: GAAGGCACTACTTTCTTGCCATACTTGTAAATGATT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGTGATAACTTGAGATaGTGTTCCAGTGGTAATTTT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLCDNLR*CSSGNF
Trigger: AAAATTACCACTGGAACACCATCTCAAGTTATCACA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAAGTTAAGAAACTGTaGTTTGGAAACAGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKVKKL*FGNRFL
Trigger: AAGGAACCTGTTTCCAAACCACAGTTTCTTAACTTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTCCCTTGATTATTACTaGCTGCCCAGGTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVSLDYY*LPRSAP
Trigger: TGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCACAGTGAGCCATGGTaGATGCATTTTGAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLHSEPW*MHFEKQ
Trigger: TTGCTTTTCAAAATGCATTCACCATGGCTCACTGTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTCATGCCCCACACAGTaGGCCATGGTGAATGCATTT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVSCPTQ*AMVNAF
Trigger: AAATGCATTCACCATGGCTCACTGTGTGGGGCATGA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATGGAATTTTCAGGCTaGAGAGAGGTTGAAACCACA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLMEFSG*REVETT
Trigger: TGTGGTTTCAACCTCTCTTCAGCCTGAAAATTCCAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGGGACAGGAAGATCCTaGTCTGTGACAAATCGACTG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVGTGRS*SVTNRL
Trigger: CAGTCGATTTGTCACAGATCAGGATCTTCCTGTCCC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAACCTAGGTGCACATTaGAATCACCTAGGGATCATT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLNLGAH*NHLGII
Trigger: AATGATCCCTAGGTGATTTCAATGTGCACCTAGGTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTAACAAAACCTGATTaGCAATGGTTGCACGTCAGG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLTKPD*QWLHVR
Trigger: CCTGACGTGCAACCATTGTCAATCAGGTTTTGTTAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATTCCCAAACCTAGGTaGACATTGAAATCACCTAGG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLIPKPR*TLKSPR
Trigger: CCTAGGTGATTTCAATGTGCACCTAGGTTTGGGAAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTCCAGCAATCCTCCTaGCTTAGCTTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELQQSS*LSFPSS
Trigger: GCTACTTGGGAAGCTAAGGCAGGAGGATTGCTGGAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGGAAGAACAACTTTTaGGGCAGTGGCTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVWKNNF*GSGSPA
Trigger: AGCTGGAGAGCCACTGCCCCAAAAGTTGTTCTTCCA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGACAAATCGACTGGATaGAATTTTCAGGCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLDKSTG*NFQAEE
Trigger: CTCTTCAGCCTGAAAATTCCATCCAGTCGATTTGTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATCATCAGATATTTCTaGAGAAGAGGCCTAGGACTC +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLIIRYF*RRGLGL
Trigger: GAGTCCTAGGCCTCTTCTCCAGAAATATCTGATGAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATCCCTTGATTATTACTaGCTGCCCAGGTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVESLDYY*LPRSAP
Trigger: TGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCCTTTTCCTCTTTGTaGCTTTGTGTATCACAAAAG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPFSSL*LCVSQK
Trigger: CTTTTGTGATACACAAAGTCACAAAGAGGAAAAGGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATCATGCCCCACACAGTaGGCCATGGTGAATGCATTT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVESCPTQ*AMVNAF
Trigger: AAATGCATTCACCATGGCTCACTGTGTGGGGCATGA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTGGACAGTCTTTCATaGGCTCAGGCCTGCAATCAT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLDSLS*AQACNH
Trigger: ATGATTGCAGGCCTGAGCTCATGAAAGACTGTCCAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGTGGACTAATGAGCTaGATAAACAATGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVCGLMS*INNGAW
Trigger: CCAGGCCCCATTGTTTATTCAGCTCATTAGTCCACA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCATTTCATGCTGGCATaGTTATTGGAAAAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLHFMLA*LLEKVG
Trigger: TCCTACCTTTTCCAATAATCATGCCAGCATGAAATG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTGCCTGATACTTACTaGAACAAAAAGGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLPDTY*NKKEGK
Trigger: CTTTCCTTCCTTTTTGTTTCAGTAAGTATCAGGCAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGGACTCAGGTATGGTaGAGCTGCCTGATACTTACT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRTQVW*SCLILT
Trigger: AGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCAGTTTAACAAAACCTaGTTGACAATGGTTGCACGT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLQFNKT*LTMVAR
Trigger: ACGTGCAACCATTGTCAATCAGGTTTTGTTAAACTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAACTTTTGGGGCAGTaGCTCTCCAGCTTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQLLGQ*LSSFLL
Trigger: TAACAGAAAGCTGGAGAGCCACTGCCCCAAAAGTTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGGAAGAACAACTTTTaGGGCAGTGGCTCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEWKNNF*GSGSPA
Trigger: AGCTGGAGAGCCACTGCCCCAAAAGTTGTTCTTCCA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCAGAGGTAAGACTCTaGAGTTTACTTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPEVRL*SLLGFP
Trigger: AGGGAAGCCAAGTAAACTCCAGAGTCTTACCTCTGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTCTCTGATTGCTAGATaGTGGGGTGGATACTGCAAC +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVSLIAR*WGGYCN
Trigger: GTTGCAGTATCCACCCCACCATCTAGCAATCAGAGA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATTTGCCTGCCCCAATaGACATTTGTTATGTCAATG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLICLPQ*TFVMSM
Trigger: CATTGACATAACAAATGTCCATTGGGGCAGGCAAAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCACGCCACCACAACTaGCCAATTAAATTAAATTTG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPRHHN*PIKLNL
Trigger: CAAATTTAATTTAATTGGCCAGTTGTGGTGGCGTGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAACCTCCCTGTCTATGTaGATTCTAACTGTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVETSLSM*ILTVAQ
Trigger: CTGGGCCACAGTTAGAATCCACATAGACAGGGAGGT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCTACTAGTGCCCTGTaGATCTCTACAGACCAAGCA +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPTSAL*ISTDQA
Trigger: TGCTTGGTCTGTAGAGATCCACAGGGCACTAGTAGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLLGFP*LLLTAQ
Trigger: CTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCATATTTTCTTGACATaGGGTAGCTTTTTAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLHIFLT*GSFLAA
Trigger: TGCTGCTAAAAAGCTACCTCATGTCAAGAAAATATG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATCCCTCCCAAATCTTaGCAGCTACAAGATCTCTCT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVIPPKS*QLQDLS
Trigger: AGAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAACACTCAGGAAGACTaGAAGAACAACTTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVNTQED*KNNFWG
Trigger: GCCCCAAAAGTTGTTCTTCCAGTCTTCCTGAGTGTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCAGAGGTAAGACTCTaGAGTTTACTTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPEVRL*SLLGFP
Trigger: AGGGAAGCCAAGTAAACTCCAGAGTCTTACCTCTGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATCTCTGATTGCTAGATaGTGGGGTGGATACTGCAAC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVESLIAR*WGGYCN
Trigger: GTTGCAGTATCCACCCCACCATCTAGCAATCAGAGA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGTAAGATTTTTCTGTaGCAGCTTCAAGACAAAAGG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLCKIFL*QLQDKR
Trigger: CCTTTTGTCTTGAAGCTGCCACAGAAAAATCTTACA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAACATAGTGTTGTTTaGCATGATACCAGATTGGAG +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKHSVV*HDTRLE
Trigger: CTCCAATCTGGTATCATGCCAAACAACACTATGTTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELLGFP*LLLTAQ
Trigger: CTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCACAGTGAGCCATGGTaGATGCATTTTGAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVHSEPW*MHFEKQ
Trigger: TTGCTTTTCAAAATGCATTCACCATGGCTCACTGTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGGCTGAAGAGAGGTTaGAACCACAAAATCTTGGAC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVERLKRG*NHKILD
Trigger: GTCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATGGAATTTTCAGGCTaGAGAGAGGTTGAAACCACA +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVMEFSG*REVETT
Trigger: TGTGGTTTCAACCTCTCTTCAGCCTGAAAATTCCAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGAAGATCCTGATCTGTaGCAAATCGACTGGATGGAA +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEEDPDL*QIDWME
Trigger: TTCCATCCAGTCGATTTGTCACAGATCAGGATCTTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAACCTAGGTGCACATTaGAATCACCTAGGGATCATT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVNLGAH*NHLGII
Trigger: AATGATCCCTAGGTGATTTCAATGTGCACCTAGGTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAATGGTGTGATAACTTaGGATGGTGTTCCAGTGGTA +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVNGVIT*DGVPVV
Trigger: TACCACTGGAACACCATCTCAAGTTATCACACCATT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTACCCAATCCCATTGCTaGTCAATTTCCTCCTACTTA +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVTQSHC*SISSYL
Trigger: TAAGTAGGAGGAAATTGATCAGCAATGGGATTGGGT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATTCCCAAACCTAGGTaGACATTGAAATCACCTAGG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVIPKPR*TLKSPR
Trigger: CCTAGGTGATTTCAATGTGCACCTAGGTTTGGGAAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGACTCAGTAGAAATTTaGCTGCCCCAATGGACATTT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVDSVEI*LPQWTF
Trigger: AAATGTCCATTGGGGCAGGCAAATTTCTACTGAGTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTATGGTAGCAGGACTTaGTCTATCTACCTAACTTGG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVYGSRT*SIYLTW
Trigger: CCAAGTTAGGTAGATAGAGCAAGTCCTGCTACCATA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATGACTAGCTTGCTCTaGCATATGAAGGCAGAACTC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEMTSLL*HMKAEL
Trigger: GAGTTCTGCCTTCATATGGCAGAGCAAGCTAGTCAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGACAAATCGACTGGATaGAATTTTCAGGCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVDKSTG*NFQAEE
Trigger: CTCTTCAGCCTGAAAATTCCATCCAGTCGATTTGTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTGATTGCTAGATGGTaGGGTGGATACTGCAACAAT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELIARW*GGYCNN
Trigger: ATTGTTGCAGTATCCACCCCACCATCTAGCAATCAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAATCATTTACAAGTATaGCAAGAAAGTAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLNHLQV*QESSAF
Trigger: GAAGGCACTACTTTCTTGCCATACTTGTAAATGATT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGTGATAACTTGAGATaGTGTTCCAGTGGTAATTTT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLCDNLR*CSSGNF
Trigger: AAAATTACCACTGGAACACCATCTCAAGTTATCACA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAAGTTAAGAAACTGTaGTTTGGAAACAGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKVKKL*FGNRFL
Trigger: AAGGAACCTGTTTCCAAACCACAGTTTCTTAACTTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAAATGTTGGACATTTaGAGGGCAATAGAGTATTCT +
Preference number: 2 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKMLDI*RAIEYS
Trigger: AGAATACTCTATTGCCCTCCAAATGTCCAACATTTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTGTGTGTGTGTGTTaGGGGCAGACACTGTATAAT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECVCVC*GQTLYN
Trigger: ATTATACAGTGTCTGCCCCCAACACACACACACACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTGAAAAATGCAGAATaGACCATGGGACTGTGTGCC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELKNAE*TMGLCA
Trigger: GGCACACAGTCCCATGGTCCATTCTGCATTTTTCAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCATTTCATGCTGGCATaGTTATTGGAAAAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVHFMLA*LLEKVG
Trigger: TCCTACCTTTTCCAATAATCATGCCAGCATGAAATG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAACCCAATCCCATTGCTaGTCAATTTCCTCCTACTTA +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVETQSHC*SISSYL
Trigger: TAAGTAGGAGGAAATTGATCAGCAATGGGATTGGGT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGCAATCTCCCACAAATaGGCCTACATATACATTGCT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEAISHK*AYIYIA
Trigger: AGCAATGTATATGTAGGCTCATTTGTGGGAGATTGC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATTCCCAAACCTAGGTaGACATTGAAATCACCTAGG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEIPKPR*TLKSPR
Trigger: CCTAGGTGATTTCAATGTGCACCTAGGTTTGGGAAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGACTCAGTAGAAATTTaGCTGCCCCAATGGACATTT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEDSVEI*LPQWTF
Trigger: AAATGTCCATTGGGGCAGGCAAATTTCTACTGAGTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATATGGTAGCAGGACTTaGTCTATCTACCTAACTTGG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEYGSRT*SIYLTW
Trigger: CCAAGTTAGGTAGATAGAGCAAGTCCTGCTACCATA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGAAACCACAAAATCTTaGACAGTCTTTCATGAGCTC +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVETTKS*TVFHEL
Trigger: GAGCTCATGAAAGACTGTCCAAGATTTTGTGGTTTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATCATCAGATATTTCTaGAGAAGAGGCCTAGGACTC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEIIRYF*RRGLGL
Trigger: GAGTCCTAGGCCTCTTCTCCAGAAATATCTGATGAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATTTGCCTGCCCCAATaGACATTTGTTATGTCAATG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVICLPQ*TFVMSM
Trigger: CATTGACATAACAAATGTCCATTGGGGCAGGCAAAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCCTTTTCCTCTTTGTaGCTTTGTGTATCACAAAAG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPFSSL*LCVSQK
Trigger: CTTTTGTGATACACAAAGTCACAAAGAGGAAAAGGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACATTTCATGCTGGCATaGTTATTGGAAAAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEHFMLA*LLEKVG
Trigger: TCCTACCTTTTCCAATAATCATGCCAGCATGAAATG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTGCCTGATACTTACTaGAACAAAAAGGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELPDTY*NKKEGK
Trigger: CTTTCCTTCCTTTTTGTTTCAGTAAGTATCAGGCAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAACCTAATTTGCATTaGCAAGACATCCAGAATACC +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKPNLH*QDIQNT
Trigger: GGTATTCTGGATGTCTTGTCAATGCAAATTAGGTTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAGGTCATTTCATGCTaGCATGATTATTGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKVISC*HDYWKR
Trigger: CCTTTTCCAATAATCATGCCAGCATGAAATGACCTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGTAAGATTTTTCTGTaGCAGCTTCAAGACAAAAGG +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVCKIFL*QLQDKR
Trigger: CCTTTTGTCTTGAAGCTGCCACAGAAAAATCTTACA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATTTGCCTGCCCCAATaGACATTTGTTATGTCAATG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEICLPQ*TFVMSM
Trigger: CATTGACATAACAAATGTCCATTGGGGCAGGCAAAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGCTGTTATCTGCTTTaGAGAAGACAAAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVESCYLL*RRQSQF
Trigger: GAATTGGCTTTGTCTTCTCCAAAGCAGATAACAGCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAACCTAATTTGCATTaGCAAGACATCCAGAATACC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKPNLH*QDIQNT
Trigger: GGTATTCTGGATGTCTTGTCAATGCAAATTAGGTTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACATATTTTCTTGACATaGGGTAGCTTTTTAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEHIFLT*GSFLAA
Trigger: TGCTGCTAAAAAGCTACCTCATGTCAAGAAAATATG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATAAACAATGGGGCCTaGATTTGTTTTAACCACATC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEINNGA*ICFNHI
Trigger: GATGTGGTTAAAACAAATCCAGGCCCCATTGTTTAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTAAGATTTTTCTGTaGCAGCTTCAAGACAAAAGG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECKIFL*QLQDKR
Trigger: CCTTTTGTCTTGAAGCTGCCACAGAAAAATCTTACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAATCATTTACAAGTATaGCAAGAAAGTAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVNHLQV*QESSAF
Trigger: GAAGGCACTACTTTCTTGCCATACTTGTAAATGATT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGTGATAACTTGAGATaGTGTTCCAGTGGTAATTTT +
Preference number: 2 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVCDNLR*CSSGNF
Trigger: AAAATTACCACTGGAACACCATCTCAAGTTATCACA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAACATAGTGTTGTTTaGCATGATACCAGATTGGAG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKHSVV*HDTRLE
Trigger: CTCCAATCTGGTATCATGCCAAACAACACTATGTTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTCAATTTTGAAAAATaGAGAATGGACCATGGGACT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEFNFEK*RMDHGT
Trigger: AGTCCCATGGTCCATTCTGCATTTTTCAAAATTGAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAATCATTTACAAGTATaGCAAGAAAGTAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVENHLQV*QESSAF
Trigger: GAAGGCACTACTTTCTTGCCATACTTGTAAATGATT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTGATAACTTGAGATaGTGTTCCAGTGGTAATTTT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECDNLR*CSSGNF
Trigger: AAAATTACCACTGGAACACCATCTCAAGTTATCACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAAATGTTGGACATTTaGAGGGCAATAGAGTATTCT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKMLDI*RAIEYS
Trigger: AGAATACTCTATTGCCCTCCAAATGTCCAACATTTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATTTGTTGTCTAAACTaGGACACGTTTGGAAATAAG +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEICCLN*DTFGNK
Trigger: CTTATTTCCAAACGTGTCCCAGTTTAGACAACAAAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTATTCACAGTTTCTaGTATAAGAGTAGGTGCATA +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECIHSF*YKSRCI
Trigger: TATGCACCTACTCTTATACCAGAAACTGTGAATACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTTCAGAATTCTAAGTaGCAAAACCTATCAGGTGTT +
Preference number: 2 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEFQNSK*QNLSGV
Trigger: AACACCTGATAGGTTTTGCCACTTAGAATTCTGAAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCATCCCTCCCAAATCTaGCCAGCTACAAGATCTCTC +
Preference number: 3 (lower is better)
Translates to: FHELRPAIMPHTVSHGECHPSQI*PATRSL
Trigger: GAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGATG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGTTTTGTAGCACCGTaGCCCTCCCCTCACTTCATC +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLCFVAP*PSPHFI
Trigger: GATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCATCCCTCCCAAATCTaGCCAGCTACAAGATCTCTC +
Preference number: 3 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHHPSQI*PATRSL
Trigger: GAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGATG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCATCCCTCCCAAATCTaGCCAGCTACAAGATCTCTC +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLHPSQI*PATRSL
Trigger: GAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGATG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp CCAGAGGTAAGACTCTGGAGTTTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAGGTCTGCTCCATCCCT +
Preference number: 3 (lower is better)
Translates to: PEVRLWSLLGFP*LLLTAQVCSIP
Trigger: AGGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAAACTCCAGAGTCTTACCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp CACCTCAGAGAGACATTGGTAAACCCTGAATGGGGCTaGTATTCTTCATTCTCCAAGAAGGCCTGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: HLRETLVNPEWG*YSSFSKKACGQ
Trigger: CTGCCCACAGGCCTTCTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR GCA 72 bp CTGGAGTTTACTTGGCTTCCCTTGATTATTACTGACTaGCCAGGTCTGCTCCATCCCTCCCAAATCTTGCCA +
Preference number: 3 (lower is better)
Translates to: LEFTWLPLIITD*PGLLHPSQILP
Trigger: TGGCAAGATTTGGGAGGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAAACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTCCTCTTTGTGACTTaGTGTATCACAAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: FHELRPAIMPHTVSHGECFLFVT*CITKAA
Trigger: AGCTGCTTTTGTGATACACAAAGTCACAAAGAGGAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCAGGCTGAAGAGAGGTaGAAACCACAAAATCTTGGA +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLQAEER*KPQNLG
Trigger: TCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCAGGCTGAAGAGAGGTaGAAACCACAAAATCTTGGA +
Preference number: 3 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHQAEER*KPQNLG
Trigger: TCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCTG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGTTTCAGCTGTAGCCTaGGAGGCTTTGTTATCTCAT +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLVSAVA*EALLSH
Trigger: ATGAGATAACAAAGCCTCCAAGGCTACAGCTGAAAC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGACTCAGTAGAAATTaGCCTGCCCCAATGGACATT +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRLSRN*PAPMDI
Trigger: AATGTCCATTGGGGCAGGCAAATTTCTACTGAGTCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAACCTAGGTGCACATaGAAATCACCTAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKPRCT*KSPRDH
Trigger: ATGATCCCTAGGTGATTTCAATGTGCACCTAGGTTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAATGGTGTGATAACTaGAGATGGTGTTCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKWCDN*RWCSSG
Trigger: ACCACTGGAACACCATCTCAAGTTATCACACCATTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGATACCCAATCCCATaGCTGATCAATTTCCTCCTA +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRYPIP*LINFLL
Trigger: TAGGAGGAAATTGATCAGCAATGGGATTGGGTATCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR CCA 72 bp CTACAAATGGCACACCTAAGAACCTCCCTGTCTATGTaGATTCTAACTGTGGCCCAGTTGTCCAAGACAGAA +
Preference number: 3 (lower is better)
Translates to: LQMAHLRTSLSM*ILTVAQLSKTE
Trigger: TTCTGTCTTGGACAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCATTTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTCCTCTTTGTGACTTaGTGTATCACAAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHFLFVT*CITKAA
Trigger: AGCTGCTTTTGTGATACACAAAGTCACAAAGAGGAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTCCTCTTTGTGACTTaGTGTATCACAAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLFLFVT*CITKAA
Trigger: AGCTGCTTTTGTGATACACAAAGTCACAAAGAGGAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGCCCCAATGGACATTaGTTATGTCAATGTAATCAC +
Preference number: 3 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLCPNGH*LCQCNH
Trigger: GTGATTACATTGACATAACAAATGTCCATTGGGGCA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGACTTTTCAGTCAATTaGCTGAAAGGAAGAAGTATC +
Preference number: 3 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHDFSVN*LKGRSI
Trigger: GATACTTCTTCCTTTCAGCAAATTGACTGAAAAGTC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp CTGTGGCAGCTTCAAGACAAAAGGACTCAGGTATGGTaGAGCTGCCTGATACTTACTGAAACAAAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: LWQLQDKRTQVW*SCLILTETKRK
Trigger: CTTCCTTTTTGTTTCAGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCTTTTGTCTTGAAGCTGCCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR CCA 72 bp GACAGGAAGATCCTGATCTGTGACAAATCGACTGGATaGAATTTTCAGGCTGAAGAGAGGTTGAAACCACAA +
Preference number: 3 (lower is better)
Translates to: DRKILICDKSTG*NFQAEERLKPQ
Trigger: TTGTGGTTTCAACCTCTCTTCAGCCTGAAAATTCCATCCAGTCGATTTGTCACAGATCAGGATCTTCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCAGGCTGAAGAGAGGTaGAAACCACAAAATCTTGGA +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLQAEER*KPQNLG
Trigger: TCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGTTTCAGCTGTAGCCTaGGAGGCTTTGTTATCTCAT +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLVSAVA*EALLSH
Trigger: ATGAGATAACAAAGCCTCCAAGGCTACAGCTGAAAC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAGACTCAGTAGAAATTaGCCTGCCCCAATGGACATT +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLRLSRN*PAPMDI
Trigger: AATGTCCATTGGGGCAGGCAAATTTCTACTGAGTCT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGGCATGATACCAGATaGGAGGATATCCTAGTCATC +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLWHDTR*EDILVI
Trigger: GATGACTAGGATATCCTCCAATCTGGTATCATGCCA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp AATGTATTGTCACCTCAGAGAGACATTGGTAAACCCTaGATGGGGCTGATATTCTTCATTCTCCAAGAAGGC +
Preference number: 3 (lower is better)
Translates to: NVLSPQRDIGKP*MGLIFFILQEG
Trigger: GCCTTCTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTGACAATACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCATCCCTCCCAAATCTaGCCAGCTACAAGATCTCTC +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVHPSQI*PATRSL
Trigger: GAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGATG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTTACTTGGCTTCCCTaGATTATTACTGACTGCCCA +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLFTWLP*IITDCP
Trigger: TGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTTTTGTAGCACCGTaGCCCTCCCCTCACTTCATC +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECFVAP*PSPHFI
Trigger: GATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAACCTAGGTGCACATaGAAATCACCTAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKPRCT*KSPRDH
Trigger: ATGATCCCTAGGTGATTTCAATGTGCACCTAGGTTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAATGGTGTGATAACTaGAGATGGTGTTCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKWCDN*RWCSSG
Trigger: ACCACTGGAACACCATCTCAAGTTATCACACCATTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTCCCCAAACATAGTGTaGTTTGGCATGATACCAGAT +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSPNIV*FGMIPD
Trigger: ATCTGGTATCATGCCAAACAACACTATGTTTGGGGA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACACCTCAGAGAGACATaGGTAAACCCTGAATGGGGC +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEHLRET*VNPEWG
Trigger: GCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGAGCTATCTTTTGTCTaGCCCCACCACCTAACCTGG +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEELSFV*PHHLTW
Trigger: CCAGGTTAGGTGGTGGGGCAAGACAAAAGATAGCTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp AAGGACTCAGGTATGGTGAAGCTGCCTGATACTTACTaGAACAAAAAGGAAGGAAAGTTAGAGGATTTCCTG +
Preference number: 3 (lower is better)
Translates to: KDSGMVKLPDTY*NKKEGKLEDFL
Trigger: CAGGAAATCCTCTAACTTTCCTTCCTTTTTGTTTCAGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTCCTCTTTGTGACTTaGTGTATCACAAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLFLFVT*CITKAA
Trigger: AGCTGCTTTTGTGATACACAAAGTCACAAAGAGGAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGCCCCAATGGACATTaGTTATGTCAATGTAATCAC +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLCPNGH*LCQCNH
Trigger: GTGATTACATTGACATAACAAATGTCCATTGGGGCA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAGGCTGAAGAGAGGTaGAAACCACAAAATCTTGGA +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQAEER*KPQNLG
Trigger: TCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAGGAGTAACAGGTATTaGGTGTTGGACTTAAGATTA +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLRSNRY*VLDLRL
Trigger: TAATCTTAAGTCCAACACCAAATACCTGTTACTCCT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGACTCAGTAGAAATTaGCCTGCCCCAATGGACATT +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRLSRN*PAPMDI
Trigger: AATGTCCATTGGGGCAGGCAAATTTCTACTGAGTCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAAAATGTTGGACATTaGGAGGGCAATAGAGTATTC +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKNVGH*EGNRVF
Trigger: GAATACTCTATTGCCCTCCAAATGTCCAACATTTTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATGGCTTTAAAAATGTaGGACATTTGGAGGGCAATA +
Preference number: 3 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLMALKM*DIWRAI
Trigger: TATTGCCCTCCAAATGTCCAACATTTTTAAAGCCAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAACCTAGGTGCACATaGAAATCACCTAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKPRCT*KSPRDH
Trigger: ATGATCCCTAGGTGATTTCAATGTGCACCTAGGTTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGACTCAGTAGAAATTaGCCTGCCCCAATGGACATT +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVERLSRN*PAPMDI
Trigger: AATGTCCATTGGGGCAGGCAAATTTCTACTGAGTCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAATGGTGTGATAACTaGAGATGGTGTTCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKWCDN*RWCSSG
Trigger: ACCACTGGAACACCATCTCAAGTTATCACACCATTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGATACCCAATCCCATaGCTGATCAATTTCCTCCTA +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRYPIP*LINFLL
Trigger: TAGGAGGAAATTGATCAGCAATGGGATTGGGTATCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGGACAGAAAGTGGATaGATGGAGATTTCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEWTESG*MEISEE
Trigger: CTCCTCTGAAATCTCCATCAATCCACTTTCTGTCCA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAACCTAGGTGCACATaGAAATCACCTAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKPRCT*KSPRDH
Trigger: ATGATCCCTAGGTGATTTCAATGTGCACCTAGGTTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGCCCCAATGGACATTaGTTATGTCAATGTAATCAC +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVCPNGH*LCQCNH
Trigger: GTGATTACATTGACATAACAAATGTCCATTGGGGCA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGCAAGGGAATTAGTGTaGGAGCAAATTTGTGAAGCA +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEARELV*EQICEA
Trigger: TGCTTCACAAATTTGCTCCAACACTAATTCCCTTGC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp AACTGGGGGCACATAAAGTTTGCAATCTCCCACAAATaGGCCTACATATACATTGCTATCTATATTAAACCT +
Preference number: 3 (lower is better)
Translates to: NWGHIKFAISHK*AYIYIAIYIKP
Trigger: AGGTTTAATATAGATAGCAATGTATATGTAGGCTCATTTGTGGGAGATTGCAAACTTTATGTGCCCCCAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGACTTTTCAGTCAATTaGCTGAAAGGAAGAAGTATC +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVDFSVN*LKGRSI
Trigger: GATACTTCTTCCTTTCAGCAAATTGACTGAAAAGTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGGAGTAACAGGTATTaGGTGTTGGACTTAAGATTA +
Preference number: 3 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRSNRY*VLDLRL
Trigger: TAATCTTAAGTCCAACACCAAATACCTGTTACTCCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACAGACACTGTATAATTaGTTGTCTAAACTGGGACAC +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEQTLYN*LSKLGH
Trigger: GTGTCCCAGTTTAGACAACAAATTATACAGTGTCTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATAATAATGACTAGCTaGCTCTGCCATATGAAGGCA +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEIIMTS*LCHMKA
Trigger: TGCCTTCATATGGCAGAGCAAGCTAGTCATTATTAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGGAGTAACAGGTATTaGGTGTTGGACTTAAGATTA +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVERSNRY*VLDLRL
Trigger: TAATCTTAAGTCCAACACCAAATACCTGTTACTCCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAACCCCGAATATTAACTaGATTGCCCTTTATTCTACA +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVETPNIN*IALYST
Trigger: TGTAGAATAAAGGGCAATCAAGTTAATATTCGGGGT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAAAATGTTGGACATTaGGAGGGCAATAGAGTATTC +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKNVGH*EGNRVF
Trigger: GAATACTCTATTGCCCTCCAAATGTCCAACATTTTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATGGCTTTAAAAATGTaGGACATTTGGAGGGCAATA +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEMALKM*DIWRAI
Trigger: TATTGCCCTCCAAATGTCCAACATTTTTAAAGCCAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAACACTGTATAATTTGTaGTCTAAACTGGGACACGTT +
Preference number: 3 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVETLYNL*SKLGHV
Trigger: AACGTGTCCCAGTTTAGACAACAAATTATACAGTGT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp AAAACTGGCTCTAAAGAGGTAAATGGTGTGATAACTTaGGATGGTGTTCCAGTGGTAATTTTCTCAATACTT +
Preference number: 3 (lower is better)
Translates to: KTGSKEVNGVIT*DGVPVVIFSIL
Trigger: AAGTATTGAGAAAATTACCACTGGAACACCATCTCAAGTTATCACACCATTTACCTCTTTAGAGCCAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR TCA 72 bp TTTATAGGAAAGAAAATAGATACCCAATCCCATTGCTaGTCAATTTCCTCCTACTTAAGCAACATTAGGCTG +
Preference number: 3 (lower is better)
Translates to: FIGKKIDTQSHC*SISSYLSNIRL
Trigger: CAGCCTAATGTTGCTTAAGTAGGAGGAAATTGATCAGCAATGGGATTGGGTATCTATTTTCTTTCCTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGGTTACCGCTTGCTTaGGCTGGGCTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGLPLA*AGLQTR
Trigger: CCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGCCCCTTTCAGGGGGTaGAGCATCCCAACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECAPFRG*SIPTRW
Trigger: CCACCTGGTTGGGATGCTGCACCCCCTGAAAGGGGC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCACCCAGGCCTGTGTATaGCAAATAGCCACGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECTQACV*QIATAA
Trigger: GGCGGCCGTGGCTATTTGGCATACACAGGCCTGGGT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGCTTCCCAAGTAGCTaGGACCACAGGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECSFPSS*DHRPTP
Trigger: TGGCGTGGGCCTGTGGTCCCAGCTACTTGGGAAGCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGGTTACCGCTTGCTTaGGCTGGGCTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGLPLA*AGLQTR
Trigger: CCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGGGTTACCGCTTGCTTaGGCTGGGCTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLGLPLA*AGLQTR
Trigger: CCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTGCTTCCTTCTGAGTaGCGCTCAATCCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLLPSE*RSIHPR
Trigger: CCGGGGATGGATTGAGCGGCACTCAGAAGGAAGCAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCAGTGCGCGGAGGGCTaGTTCCTTCTGAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLQCAEG*FLLSAA
Trigger: AGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCAGTGCGCGGAGGGCTaGTTCCTTCTGAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHQCAEG*FLLSAA
Trigger: AGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGCCCCTTTCAGGGGGTaGAGCATCCCAACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHAPFRG*SIPTRW
Trigger: CCACCTGGTTGGGATGCTGCACCCCCTGAAAGGGGC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGCCCCTTTCAGGGGGTaGAGCATCCCAACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLAPFRG*SIPTRW
Trigger: CCACCTGGTTGGGATGCTGCACCCCCTGAAAGGGGC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGCTGCAGACACGGGTaGAGTTGCATTAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGCRHG*SCIRDS
Trigger: GCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTGCTTGAGCTGGGCTaGAGACACGGGTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLLELG*RHGCSC
Trigger: GCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCAAGGGTTACCGCTTaGTTGAGCTGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPRVTA*LSWAAD
Trigger: GTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTCCTTGCAGCATGGTaGCCCTTCCACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLLAAW*PFHLCL
Trigger: GAGGCACAGGTGGAAGGGGCACCATGCTGCAAGGAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGACCCAGGCCTGTGTATaGCAAATAGCCACGGCCGCC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLTQACV*QIATAA
Trigger: GGCGGCCGTGGCTATTTGGCATACACAGGCCTGGGT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGGATGCCCAGGGTCTaGAGGGTGTATTCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGMPRV*RVYSAA
Trigger: TGCAGCCGAATACACCCTGCAGACCCTGGGCATCCC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGGGATGCCCAGGGTCTaGAGGGTGTATTCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLGMPRV*RVYSAA
Trigger: TGCAGCCGAATACACCCTGCAGACCCTGGGCATCCC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTCCATCAGTGGGGATaGCCAGGGTCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLHQWG*PGSAGC
Trigger: ACACCCTGCAGACCCTGGGCATCCCCACTGATGGAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTCCATCAGTGGGGATaGCCAGGGTCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLHQWG*PGSAGC
Trigger: ACACCCTGCAGACCCTGGGCATCCCCACTGATGGAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTATATCCTGTGCGCTaGACCAGTGCGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLYPVR*TSARRA
Trigger: AGCCCTCCGCGCACTGGTCCAGCGCACAGGATATAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGCAGTTGTCCACACTaGCACAAACCCCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGSCPH*HKPLRG
Trigger: GCCTCTTAGGGGTTTGTGCCAGTGTGGACAACTGCC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCATCGCCTCCATCAGTaGGGATGCCCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHHRLHQ*GCPGSA
Trigger: TGCAGACCCTGGGCATCCCCACTGATGGAGGCGATG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGCTTCCCAAGTAGCTaGGACCACAGGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSFPSS*DHRPTP
Trigger: TGGCGTGGGCCTGTGGTCCCAGCTACTTGGGAAGCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGCTTCCCAAGTAGCTaGGACCACAGGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSFPSS*DHRPTP
Trigger: TGGCGTGGGCCTGTGGTCCCAGCTACTTGGGAAGCT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGCTCGCTTCTGGCTCTaGGCATGTGCCCAGACACAC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHARFWL*ACAQTH
Trigger: GTGTGTCTGGGCACATGCCCAGAGCCAGAAGCGAGC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCGCTTGGGTAGACGATaGCATCGACAACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRLGRR*HRQHLQ
Trigger: CTGAAGGTGTTGTCGATGTCATCGTCTACCCAAGCG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCAAGCTATATCCTGTaGGCTGGACCAGTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPSYIL*AGPVRG
Trigger: TCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTGCTTGAGCTGGGCTaGAGACACGGGTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLLELG*RHGCSC
Trigger: GCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTGCTTGAGCTGGGCTaGAGACACGGGTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLLELG*RHGCSC
Trigger: GCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCAAGGGTTACCGCTTaGTTGAGCTGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPRVTA*LSWAAD
Trigger: GTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTCCAGCAATCCTCCTaGCTTAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLQQSS*LSFPSS
Trigger: GCTACTTGGGAAGCTAAGGCAGGAGGATTGCTGGAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTGGCTCTGGGCATGTaGCCAGACACACTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLALGM*PDTLLP
Trigger: TGGAAGCAGTGTGTCTGGGCACATGCCCAGAGCCAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTGGTTTTGCTAGGGTaGCTTCAATGGGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLVLLG*LQWGNH
Trigger: ATGGTTCCCCCATTGAAGTCACCCTAGCAAAACCAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTGGTGGCTGGGAAATaGAGACTGGGAATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLVAGK*RLGIAA
Trigger: TGCAGCAATTCCCAGTCTTCATTTCCCAGCCACCAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCAGGATTCATTGGGGTaGGCTCCATCCCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECQDSLG*APSQVK
Trigger: TTTTACCTGGGATGGAGCTCACCCCAATGAATCCTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGGACAGGAAGATCCTaGTCTGTGACAAATCGACTG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGTGRS*SVTNRL
Trigger: CAGTCGATTTGTCACAGATCAGGATCTTCCTGTCCC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCCTCGCCATGGCAGCTaGTCGATGACTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLPRHGS*SMTLIL
Trigger: GAGTATGAGAGTCATCGAGCAGCTGCCATGGCGAGG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGTCCAATAGCAGAGTaGAGCTGGTACACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCPIAE*SWYTGC
Trigger: ACAGCCAGTGTACCAGCTGCACTCTGCTATTGGACA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGACACGGGTGCAGTTaGATTAGGGACAGCATATCC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRHGCS*IRDSIS
Trigger: GGATATGCTGTCCCTAATGCAACTGCACCCGTGTCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCCTCGGGCAGTCACTaGAAAAGTTGGGTAGACCTC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPSGSH*KSWVDL
Trigger: GAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGAATTGCTGTGCTCATaGTCGCTTCTGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLELLCS*SLLALG
Trigger: GCCCAGAGCCAGAAGCGAGCATGAGCACAGCAATTC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTTGAGGCCAGGAATTaGTGTGCTCATGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECFEARN*CAHARF
Trigger: GAAGCGAGCATGAGCACAGCAATTCCTGGCCTCAAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGCATCCCAACCAGGTaGAGGGCCACCATATTTTCT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECSIPTR*RATIFS
Trigger: AGAAAATATGGTGGCCCTCCACCTGGTTGGGATGCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGCAGTTGTCCACACTaGCACAAACCCCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGSCPH*HKPLRG
Trigger: GCCTCTTAGGGGTTTGTGCCAGTGTGGACAACTGCC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGGAAGAACAACTTTTaGGGCAGTGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECWKNNF*GSGSPA
Trigger: AGCTGGAGAGCCACTGCCCCAAAAGTTGTTCTTCCA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCGCTTGGGTAGACGATaGCATCGACAACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHRLGRR*HRQHLQ
Trigger: CTGAAGGTGTTGTCGATGTCATCGTCTACCCAAGCG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCATGTCCCCATAACTaGATTCTTCCTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPCPHN*ILPGSS
Trigger: ACTGCTACCAGGAAGAATTCAGTTATGGGGACATGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGGACTCAGGTATGGTaGAGCTGCCTGATACTTACT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRTQVW*SCLILT
Trigger: AGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGACAGAAAGTGGATTaGTGGAGATTTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGQKVD*WRFQRR
Trigger: CCTCCTCTGAAATCTCCATCAATCCACTTTCTGTCC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGCTTGCTCTGCCATATaGAGGCAGAACTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLACSAI*RQNSGL
Trigger: GAGTCCTGAGTTCTGCCTTCATATGGCAGAGCAAGC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTCTACTTCTGGCTCTaGCCAGTCTACTGCAATACC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECFYFWL*PVYCNT
Trigger: GGTATTGCAGTAGACTGGGCAGAGCCAGAAGTAGAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGCTGCATACGTCTTTaGTTCATCCACAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGCIRL*FIHKGT
Trigger: AGTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCAGGGTGTATTCGGCTaGATACGTCTTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECQGVFG*IRLCFI
Trigger: GATGAAGCAAAGACGTATGCAGCCGAATACACCCTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTGATTATTACTGACTaGCCAGGTCTGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLIITD*PGLLHP
Trigger: GGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTCCAGCAATCCTCCTaGCTTAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLQQSS*LSFPSS
Trigger: GCTACTTGGGAAGCTAAGGCAGGAGGATTGCTGGAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCAAGGTAGGTTGTGGTaGGATCATAAACTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECQGRLW*DHKLGP
Trigger: TGGGCCAAGTTTATGATCCCACCACAACCTACCTTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTCCAAGGTAGGTTGTaGTGGGATCATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLQGRL*WDHKLG
Trigger: GCCAAGTTTATGATCCCACCACAACCTACCTTGGAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTGTCTCCTTTGACCTaGTATCCTCGACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLSPLT*YPRPRP
Trigger: AGGCCTGGGTCGAGGATACCAGGTCAAAGGAGACAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTGTGACAGGATTCATTaGGGTGAGCTCCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHCDRIH*GELHPR
Trigger: CCTGGGATGGAGCTCACCCCAATGAATCCTGTCACA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGTGCAGCTGGTACACTaGCTGTCCCCAGTTATTTTT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECVQLVH*LSPVIF
Trigger: AAAAATAACTGGGGACAGCCAGTGTACCAGCTGCAC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGGATTGCAGGATTCTaGCTGGCTAGAGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECWIAGF*LARAGI
Trigger: TATTCCTGCTCTAGCCAGCCAGAATCCTGCAATCCA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGGGACAGCATATCCTaGGAAAGCAGTAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHRDSIS*ESSSSS
Trigger: GCTGCTGCTACTGCTTTCCCAGGATATGCTGTCCCT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGGGACAGCATATCCTaGGAAAGCAGTAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRDSIS*ESSSSS
Trigger: GCTGCTGCTACTGCTTTCCCAGGATATGCTGTCCCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCAACTTTTGGGGCAGTaGCTCTCCAGCTTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECQLLGQ*LSSFLL
Trigger: TAACAGAAAGCTGGAGAGCCACTGCCCCAAAAGTTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATGCAGAATGGACCATaGGACTGTGTGCCCCAATTA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECMQNGP*DCVPQL
Trigger: TAATTGGGGCACACAGTCCCATGGTCCATTCTGCAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCATCCCCGGATTTGTaGTTTGATTCCATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPSPDL*FDSIES
Trigger: ACTCTCAATGGAATCAAATCACAAATCCGGGGATGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTGGTTTTGCTAGGGTaGCTTCAATGGGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLVLLG*LQWGNH
Trigger: ATGGTTCCCCCATTGAAGTCACCCTAGCAAAACCAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTGGTGGCTGGGAAATaGAGACTGGGAATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLVAGK*RLGIAA
Trigger: TGCAGCAATTCCCAGTCTTCATTTCCCAGCCACCAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTCTTTTGTCTCCTTTaGCCTGGTATCCTCGACCCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLFCLL*PGILDP
Trigger: TGGGTCGAGGATACCAGGTCAAAGGAGACAAAAGAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCAGGATTCATTGGGGTaGGCTCCATCCCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLQDSLG*APSQVK
Trigger: TTTTACCTGGGATGGAGCTCACCCCAATGAATCCTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTCAGCTTTGGAGGTGTaGAAGGGTGGATTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSALEV*KGGLQD
Trigger: ATCCTGCAATCCACCCTTTCACACCTCCAAAGCTGA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTCAGCTTTGGAGGTGTaGAAGGGTGGATTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSALEV*KGGLQD
Trigger: ATCCTGCAATCCACCCTTTCACACCTCCAAAGCTGA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGGGACAGGAAGATCCTaGTCTGTGACAAATCGACTG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLGTGRS*SVTNRL
Trigger: CAGTCGATTTGTCACAGATCAGGATCTTCCTGTCCC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGGACAGGAAGATCCTaGTCTGTGACAAATCGACTG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGTGRS*SVTNRL
Trigger: CAGTCGATTTGTCACAGATCAGGATCTTCCTGTCCC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAACCCTGAATGGGGCTaGTATTCTTCATTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECNPEWG*YSSFSK
Trigger: CTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCACCCAGGCCTGTGTATaGCAAATAGCCACGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLTQACV*QIATAA
Trigger: GGCGGCCGTGGCTATTTGGCATACACAGGCCTGGGT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGGATGCCCAGGGTCTaGAGGGTGTATTCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGMPRV*RVYSAA
Trigger: TGCAGCCGAATACACCCTGCAGACCCTGGGCATCCC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTCCATCAGTGGGGATaGCCAGGGTCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLHQWG*PGSAGC
Trigger: ACACCCTGCAGACCCTGGGCATCCCCACTGATGGAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATCCCTCCCAAATCTTaGCAGCTACAAGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECIPPKS*QLQDLS
Trigger: AGAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGGGCACATAAAGTTTaGAATCTCCCACAAATGAGC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGAHKV*NLPQMS
Trigger: GCTCATTTGTGGGAGATTGCAAACTTTATGTGCCCC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGCATCCCAACCAGGTaGAGGGCCACCATATTTTCT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSIPTR*RATIFS
Trigger: AGAAAATATGGTGGCCCTCCACCTGGTTGGGATGCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCAAAGCCTCGGTTTTTaGTTTTATCTGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECQSLGF*FYLQRL
Trigger: CAAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTGGGAAATGAAGACTaGGAATTGCTGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLGNED*ELLHRS
Trigger: AGACCTATGCAGCAATTCCCAGTCTTCATTTCCCAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATGTCCTTTGGTGGCTaGGAAATGAAGACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECMSFGG*EMKTGN
Trigger: ATTCCCAGTCTTCATTTCCCAGCCACCAAAGGACAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCATCGCCTCCATCAGTaGGGATGCCCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLHRLHQ*GCPGSA
Trigger: TGCAGACCCTGGGCATCCCCACTGATGGAGGCGATG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTGGAAGAACAACTTTTaGGGCAGTGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHWKNNF*GSGSPA
Trigger: AGCTGGAGAGCCACTGCCCCAAAAGTTGTTCTTCCA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAACACTCAGGAAGACTaGAAGAACAACTTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECNTQED*KNNFWG
Trigger: GCCCCAAAAGTTGTTCTTCCAGTCTTCCTGAGTGTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTGATTGCTAGATGGTaGGGTGGATACTGCAACAAT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLIARW*GGYCNN
Trigger: ATTGTTGCAGTATCCACCCCACCATCTAGCAATCAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATACCTCCCTGTCTATGTaGATTCTAACTGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHTSLSM*ILTVAQ
Trigger: CTGGGCCACAGTTAGAATCCACATAGACAGGGAGGT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGTGTGTGTGTGTGTTaGGGGCAGACACTGTATAAT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCVCVC*GQTLYN
Trigger: ATTATACAGTGTCTGCCCCCAACACACACACACACA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCCTACTAGTGCCCTGTaGATCTCTACAGACCAAGCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLPTSAL*ISTDQA
Trigger: TGCTTGGTCTGTAGAGATCCACAGGGCACTAGTAGG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCTACTAGTGCCCTGTaGATCTCTACAGACCAAGCA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPTSAL*ISTDQA
Trigger: TGCTTGGTCTGTAGAGATCCACAGGGCACTAGTAGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTGAAAAATGCAGAATaGACCATGGGACTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLKNAE*TMGLCA
Trigger: GGCACACAGTCCCATGGTCCATTCTGCATTTTTCAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCGGAAAAGGTTTCCTTaGTTATGGCGAATTCAACGT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRKRFP*LWRIQR
Trigger: ACGTTGAATTCGCCATAATCAAGGAAACCTTTTCCG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCATGTCCCCATAACTaGATTCTTCCTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPCPHN*ILPGSS
Trigger: ACTGCTACCAGGAAGAATTCAGTTATGGGGACATGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCACAGTGAGCCATGGTaGATGCATTTTGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECHSEPW*MHFEKQ
Trigger: TTGCTTTTCAAAATGCATTCACCATGGCTCACTGTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATGGAATTTTCAGGCTaGAGAGAGGTTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECMEFSG*REVETT
Trigger: TGTGGTTTCAACCTCTCTTCAGCCTGAAAATTCCAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGGACTCAGGTATGGTaGAGCTGCCTGATACTTACT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHRTQVW*SCLILT
Trigger: AGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAATGGTGTGATAACTTaGGATGGTGTTCCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECNGVIT*DGVPVV
Trigger: TACCACTGGAACACCATCTCAAGTTATCACACCATT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGCAATCTCCCACAAATaGGCCTACATATACATTGCT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECAISHK*AYIYIA
Trigger: AGCAATGTATATGTAGGCTCATTTGTGGGAGATTGC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGACAGAAAGTGGATTaGTGGAGATTTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGQKVD*WRFQRR
Trigger: CCTCCTCTGAAATCTCCATCAATCCACTTTCTGTCC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGTTTTTGGTTTTATCTaGAGCGCTTGGGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECVFGFI*SAWVDD
Trigger: ATCGTCTACCCAAGCGCTGCAGATAAAACCAAAAAC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGCTGCATACGTCTTTaGTTCATCCACAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGCIRL*FIHKGT
Trigger: AGTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCAGGGTGTATTCGGCTaGATACGTCTTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHQGVFG*IRLCFI
Trigger: GATGAAGCAAAGACGTATGCAGCCGAATACACCCTG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCAGGGTGTATTCGGCTaGATACGTCTTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLQGVFG*IRLCFI
Trigger: GATGAAGCAAAGACGTATGCAGCCGAATACACCCTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCAAGGGTTACCGCTTaGTTGAGCTGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPRVTA*LSWAAD
Trigger: GTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTGATTATTACTGACTaGCCAGGTCTGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLIITD*PGLLHP
Trigger: GGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGACTCAGTAGAAATTTaGCTGCCCCAATGGACATTT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECDSVEI*LPQWTF
Trigger: AAATGTCCATTGGGGCAGGCAAATTTCTACTGAGTC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTATGGTAGCAGGACTTaGTCTATCTACCTAACTTGG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECYGSRT*SIYLTW
Trigger: CCAAGTTAGGTAGATAGAGCAAGTCCTGCTACCATA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTTATCTGCAGCGCTTaGGTAGACGATGACATCGAC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHFICSA*VDDDID
Trigger: GTCGATGTCATCGTCTACCCAAGCGCTGCAGATAAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATATCAACTTCTACTTCTaGCTCTGCCCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHINFYF*LCPVYC
Trigger: GCAGTAGACTGGGCAGAGCCAGAAGTAGAAGTTGAT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATCAACTTCTACTTCTaGCTCTGCCCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLINFYF*LCPVYC
Trigger: GCAGTAGACTGGGCAGAGCCAGAAGTAGAAGTTGAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCTCTCCACAGCACCTaGTTTGATATTGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPLHST*FDIVEF
Trigger: GAATTCAACAATATCAAACCAGGTGCTGTGGAGAGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCAAGGTAGGTTGTGGTaGGATCATAAACTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHQGRLW*DHKLGP
Trigger: TGGGCCAAGTTTATGATCCCACCACAACCTACCTTG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCAAGGTAGGTTGTGGTaGGATCATAAACTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLQGRLW*DHKLGP
Trigger: TGGGCCAAGTTTATGATCCCACCACAACCTACCTTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTCCAAGGTAGGTTGTaGTGGGATCATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLQGRL*WDHKLG
Trigger: GCCAAGTTTATGATCCCACCACAACCTACCTTGGAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTCCAAGGTAGGTTGTaGTGGGATCATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLQGRL*WDHKLG
Trigger: GCCAAGTTTATGATCCCACCACAACCTACCTTGGAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGTGCAGCTGGTACACTaGCTGTCCCCAGTTATTTTT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHVQLVH*LSPVIF
Trigger: AAAAATAACTGGGGACAGCCAGTGTACCAGCTGCAC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGGATTGCAGGATTCTaGCTGGCTAGAGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLWIAGF*LARAGI
Trigger: TATTCCTGCTCTAGCCAGCCAGAATCCTGCAATCCA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCAGAGGTAAGACTCTaGAGTTTACTTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPEVRL*SLLGFP
Trigger: AGGGAAGCCAAGTAAACTCCAGAGTCTTACCTCTGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATCATCAGATATTTCTaGAGAAGAGGCCTAGGACTC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECIIRYF*RRGLGL
Trigger: GAGTCCTAGGCCTCTTCTCCAGAAATATCTGATGAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAAACCAAGGAGAACTaGGGGCACATAAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKTKEN*GHIKFA
Trigger: TGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAGCCAGGACTGTCCTaGAAAACCAGAATGTATTGT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKPGLS*KTRMYC
Trigger: ACAATACATTCTGGTTTTCCAGGACAGTCCTGGCTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATATGCAGAATGGACCATaGGACTGTGTGCCCCAATTA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHMQNGP*DCVPQL
Trigger: TAATTGGGGCACACAGTCCCATGGTCCATTCTGCAT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCATCCCCGGATTTGTaGTTTGATTCCATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPSPDL*FDSIES
Trigger: ACTCTCAATGGAATCAAATCACAAATCCGGGGATGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCCATCCCCGGATTTGTaGTTTGATTCCATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLPSPDL*FDSIES
Trigger: ACTCTCAATGGAATCAAATCACAAATCCGGGGATGG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTACTTGGCTTCCCTTaGTTATTACTGACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLLGFP*LLLTAQ
Trigger: CTGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGGCTGAAGAGAGGTTaGAACCACAAAATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRLKRG*NHKILD
Trigger: GTCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGAAGATCCTGATCTGTaGCAAATCGACTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHEDPDL*QIDWME
Trigger: TTCCATCCAGTCGATTTGTCACAGATCAGGATCTTC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCATTTCATGCTGGCATaGTTATTGGAAAAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECHFMLA*LLEKVG
Trigger: TCCTACCTTTTCCAATAATCATGCCAGCATGAAATG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTGCCTGATACTTACTaGAACAAAAAGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLPDTY*NKKEGK
Trigger: CTTTCCTTCCTTTTTGTTTCAGTAAGTATCAGGCAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCAGGCATCTTCAGATaGATGAGGTATTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPGIFR*MRYFGF
Trigger: AAAACCAAAATACCTCATTCATCTGAAGATGCCTGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAACCCTGAATGGGGCTaGTATTCTTCATTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLNPEWG*YSSFSK
Trigger: CTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAACCCTGAATGGGGCTaGTATTCTTCATTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHNPEWG*YSSFSK
Trigger: CTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGACATTGGTAAACCCTaGATGGGGCTGATATTCTTC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHDIGKP*MGLIFF
Trigger: GAAGAATATCAGCCCCATTCAGGGTTTACCAATGTC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTTCTCTGTTTACTATaGCCCTGCTCAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLLCLL*PCSVRK
Trigger: CTTTCTGACTGAGCAGGGTCATAGTAAACAGAGAAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTTCAGAGGAGGAAGTaGTCCATTCTTCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECFQRRK*SILLCL
Trigger: TAAACAGAGAAGAATGGATCACTTCCTCCTCTGAAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGCCCCTTTCAGGGGGTaGAGCATCCCAACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVAPFRG*SIPTRW
Trigger: CCACCTGGTTGGGATGCTGCACCCCCTGAAAGGGGC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCTCGCCATGGCAGCTaGTCGATGACTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPRHGS*SMTLIL
Trigger: GAGTATGAGAGTCATCGAGCAGCTGCCATGGCGAGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCCTCGGGCAGTCACTaGAAAAGTTGGGTAGACCTC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPSGSH*KSWVDL
Trigger: GAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGGGCACATAAAGTTTaGAATCTCCCACAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGAHKV*NLPQMS
Trigger: GCTCATTTGTGGGAGATTGCAAACTTTATGTGCCCC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATATGACTAGCTTGCTCTaGCATATGAAGGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHMTSLL*HMKAEL
Trigger: GAGTTCTGCCTTCATATGGCAGAGCAAGCTAGTCAT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATGACTAGCTTGCTCTaGCATATGAAGGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLMTSLL*HMKAEL
Trigger: GAGTTCTGCCTTCATATGGCAGAGCAAGCTAGTCAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGCAGTTGTCCACACTaGCACAAACCCCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGSCPH*HKPLRG
Trigger: GCCTCTTAGGGGTTTGTGCCAGTGTGGACAACTGCC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATGTCCTTTGGTGGCTaGGAAATGAAGACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLMSFGG*EMKTGN
Trigger: ATTCCCAGTCTTCATTTCCCAGCCACCAAAGGACAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAGAATAGCTGTCTTTaGTCTTGTCCAATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKNSCL*SCPIAE
Trigger: CTCTGCTATTGGACAAGACCAAAGACAGCTATTCTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGAAACCACAAAATCTTaGACAGTCTTTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECETTKS*TVFHEL
Trigger: GAGCTCATGAAAGACTGTCCAAGATTTTGTGGTTTC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCACGCCACCACAACTaGCCAATTAAATTAAATTTG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPRHHN*PIKLNL
Trigger: CAAATTTAATTTAATTGGCCAGTTGTGGTGGCGTGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTGTGTGTGTGTGTGTTaGGGGCAGACACTGTATAAT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHCVCVC*GQTLYN
Trigger: ATTATACAGTGTCTGCCCCCAACACACACACACACA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGCTGTTATCTGCTTTaGAGAAGACAAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECSCYLL*RRQSQF
Trigger: GAATTGGCTTTGTCTTCTCCAAAGCAGATAACAGCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTGAAAAATGCAGAATaGACCATGGGACTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLKNAE*TMGLCA
Trigger: GGCACACAGTCCCATGGTCCATTCTGCATTTTTCAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGATTTGTTCTTCGCTaGACTTCATCTTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRFVLR*TSSFPS
Trigger: TGATGGAAAAGATGAAGTTCAGCGAAGAACAAATCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGGGTTACCGCTTGCTTaGGCTGGGCTGCAGACACGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEGLPLA*AGLQTR
Trigger: CCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAACCTAGGTGCACATTaGAATCACCTAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLNLGAH*NHLGII
Trigger: AATGATCCCTAGGTGATTTCAATGTGCACCTAGGTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAATGGTGTGATAACTTaGGATGGTGTTCCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHNGVIT*DGVPVV
Trigger: TACCACTGGAACACCATCTCAAGTTATCACACCATT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATACCCAATCCCATTGCTaGTCAATTTCCTCCTACTTA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHTQSHC*SISSYL
Trigger: TAAGTAGGAGGAAATTGATCAGCAATGGGATTGGGT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTAACAAAACCTGATTaGCAATGGTTGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLTKPD*QWLHVR
Trigger: CCTGACGTGCAACCATTGTCAATCAGGTTTTGTTAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGCAATCTCCCACAAATaGGCCTACATATACATTGCT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHAISHK*AYIYIA
Trigger: AGCAATGTATATGTAGGCTCATTTGTGGGAGATTGC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGCAATCTCCCACAAATaGGCCTACATATACATTGCT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLAISHK*AYIYIA
Trigger: AGCAATGTATATGTAGGCTCATTTGTGGGAGATTGC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGTGAGGATTTTTCGTaGAGAATGGTTGATGAACAA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCEDFS*RMVDEQ
Trigger: TTGTTCATCAACCATTCTTCACGAAAAATCCTCACA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACAGTGCGCGGAGGGCTaGTTCCTTCTGAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEQCAEG*FLLSAA
Trigger: AGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGCCCCTTTCAGGGGGTaGAGCATCCCAACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEAPFRG*SIPTRW
Trigger: CCACCTGGTTGGGATGCTGCACCCCCTGAAAGGGGC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGTTTTTGGTTTTATCTaGAGCGCTTGGGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLVFGFI*SAWVDD
Trigger: ATCGTCTACCCAAGCGCTGCAGATAAAACCAAAAAC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTCCTTGCAGCATGGTaGCCCTTCCACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLLAAW*PFHLCL
Trigger: GAGGCACAGGTGGAAGGGGCACCATGCTGCAAGGAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTACCCAGGCCTGTGTATaGCAAATAGCCACGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVTQACV*QIATAA
Trigger: GGCGGCCGTGGCTATTTGGCATACACAGGCCTGGGT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGGGATGCCCAGGGTCTaGAGGGTGTATTCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVGMPRV*RVYSAA
Trigger: TGCAGCCGAATACACCCTGCAGACCCTGGGCATCCC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTCCATCAGTGGGGATaGCCAGGGTCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLHQWG*PGSAGC
Trigger: ACACCCTGCAGACCCTGGGCATCCCCACTGATGGAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATATTCCCAAACCTAGGTaGACATTGAAATCACCTAGG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHIPKPR*TLKSPR
Trigger: CCTAGGTGATTTCAATGTGCACCTAGGTTTGGGAAT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTATGGTAGCAGGACTTaGTCTATCTACCTAACTTGG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHYGSRT*SIYLTW
Trigger: CCAAGTTAGGTAGATAGAGCAAGTCCTGCTACCATA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTATGGTAGCAGGACTTaGTCTATCTACCTAACTTGG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLYGSRT*SIYLTW
Trigger: CCAAGTTAGGTAGATAGAGCAAGTCCTGCTACCATA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAATATCGGGCTGTATTaGAGTCAGAAACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECNIGLY*SQKHRR
Trigger: TCTTCTATGTTTCTGACTGCAATACAGCCCGATATT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAGTCTACAGTCTTCTaGCCAAGTTGTAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKSTVF*PSCRFV
Trigger: AACAAATCTACAACTTGGCCAGAAGACTGTAGACTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTATATCCTGTGCGCTaGACCAGTGCGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLYPVR*TSARRA
Trigger: AGCCCTCCGCGCACTGGTCCAGCGCACAGGATATAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCTTTGTCCATTTTCCTaGACCAAGCTATATCCTGTG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLLCPFS*TKLYPV
Trigger: CACAGGATATAGCTTGGTCCAGGAAAATGGACAAAG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTTTGTCCATTTTCCTaGACCAAGCTATATCCTGTG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLCPFS*TKLYPV
Trigger: CACAGGATATAGCTTGGTCCAGGAAAATGGACAAAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCCTCTCCACAGCACCTaGTTTGATATTGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLPLHST*FDIVEF
Trigger: GAATTCAACAATATCAAACCAGGTGCTGTGGAGAGG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCTCTCCACAGCACCTaGTTTGATATTGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPLHST*FDIVEF
Trigger: GAATTCAACAATATCAAACCAGGTGCTGTGGAGAGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCATCGCCTCCATCAGTaGGGATGCCCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVHRLHQ*GCPGSA
Trigger: TGCAGACCCTGGGCATCCCCACTGATGGAGGCGATG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGTCACTGCAAAAGTTaGGTAGACCTCATAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSHCKS*VDLIGC
Trigger: ACAACCTATGAGGTCTACCCAACTTTTGCAGTGACT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGTCACTGCAAAAGTTaGGTAGACCTCATAGGTTGT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSHCKS*VDLIGC
Trigger: ACAACCTATGAGGTCTACCCAACTTTTGCAGTGACT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGACAAATCGACTGGATaGAATTTTCAGGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHDKSTG*NFQAEE
Trigger: CTCTTCAGCCTGAAAATTCCATCCAGTCGATTTGTC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATAAACAATGGGGCCTaGATTTGTTTTAACCACATC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECINNGA*ICFNHI
Trigger: GATGTGGTTAAAACAAATCCAGGCCCCATTGTTTAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAGGTCATTTCATGCTaGCATGATTATTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKVISC*HDYWKR
Trigger: CCTTTTCCAATAATCATGCCAGCATGAAATGACCTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATCATCAGATATTTCTaGAGAAGAGGCCTAGGACTC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLIIRYF*RRGLGL
Trigger: GAGTCCTAGGCCTCTTCTCCAGAAATATCTGATGAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAACATAGTGTTGTTTaGCATGATACCAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKHSVV*HDTRLE
Trigger: CTCCAATCTGGTATCATGCCAAACAACACTATGTTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGCTTCCCAAGTAGCTaGGACCACAGGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVSFPSS*DHRPTP
Trigger: TGGCGTGGGCCTGTGGTCCCAGCTACTTGGGAAGCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAAACCAAGGAGAACTaGGGGCACATAAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKTKEN*GHIKFA
Trigger: TGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAAGCCAGGACTGTCCTaGAAAACCAGAATGTATTGT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHKPGLS*KTRMYC
Trigger: ACAATACATTCTGGTTTTCCAGGACAGTCCTGGCTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGCTCGCTTCTGGCTCTaGGCATGTGCCCAGACACAC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVARFWL*ACAQTH
Trigger: GTGTGTCTGGGCACATGCCCAGAGCCAGAAGCGAGC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTCTTTTGTCTCCTTTaGCCTGGTATCCTCGACCCA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLFCLL*PGILDP
Trigger: TGGGTCGAGGATACCAGGTCAAAGGAGACAAAAGAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCCTTTTCCTCTTTGTaGCTTTGTGTATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPFSSL*LCVSQK
Trigger: CTTTTGTGATACACAAAGTCACAAAGAGGAAAAGGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCATTTCATGCTGGCATaGTTATTGGAAAAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHHFMLA*LLEKVG
Trigger: TCCTACCTTTTCCAATAATCATGCCAGCATGAAATG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCATTTCATGCTGGCATaGTTATTGGAAAAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLHFMLA*LLEKVG
Trigger: TCCTACCTTTTCCAATAATCATGCCAGCATGAAATG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCAGGCATCTTCAGATaGATGAGGTATTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPGIFR*MRYFGF
Trigger: AAAACCAAAATACCTCATTCATCTGAAGATGCCTGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTTCAGAGGAGGAAGTaGTCCATTCTTCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLFQRRK*SILLCL
Trigger: TAAACAGAGAAGAATGGATCACTTCCTCCTCTGAAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGTGTCACTCGGGTTATaGTCTAATCGTCATATCAAA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLVSLGL*SNRHIK
Trigger: TTTGATATGACGATTAGAGCATAACCCGAGTGACAC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGTGTCACTCGGGTTATaGTCTAATCGTCATATCAAA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHVSLGL*SNRHIK
Trigger: TTTGATATGACGATTAGAGCATAACCCGAGTGACAC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCAAGCTATATCCTGTaGGCTGGACCAGTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPSYIL*AGPVRG
Trigger: TCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTTCATAGCCTCAACTaGATCTTCTCGGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLFHSLN*IFSVTE
Trigger: TTCAGTAACCGAGAAGATGCAGTTGAGGCTATGAAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTCCTTGCAGCATGGTaGCCCTTCCACCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELLAAW*PFHLCL
Trigger: GAGGCACAGGTGGAAGGGGCACCATGCTGCAAGGAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAACCCAGGCCTGTGTATaGCAAATAGCCACGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVETQACV*QIATAA
Trigger: GGCGGCCGTGGCTATTTGGCATACACAGGCCTGGGT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTCCATCAGTGGGGATaGCCAGGGTCTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELHQWG*PGSAGC
Trigger: ACACCCTGCAGACCCTGGGCATCCCCACTGATGGAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGGCTGCAGACACGGGTaGAGTTGCATTAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVGCRHG*SCIRDS
Trigger: GCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCAAGGGTTACCGCTTaGTTGAGCTGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPRVTA*LSWAAD
Trigger: GTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTATATCCTGTGCGCTaGACCAGTGCGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELYPVR*TSARRA
Trigger: AGCCCTCCGCGCACTGGTCCAGCGCACAGGATATAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAGCATCCCAACCAGGTaGAGGGCCACCATATTTTCT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSIPTR*RATIFS
Trigger: AGAAAATATGGTGGCCCTCCACCTGGTTGGGATGCT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACATCGCCTCCATCAGTaGGGATGCCCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEHRLHQ*GCPGSA
Trigger: TGCAGACCCTGGGCATCCCCACTGATGGAGGCGATG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGGAAGAACAACTTTTaGGGCAGTGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLWKNNF*GSGSPA
Trigger: AGCTGGAGAGCCACTGCCCCAAAAGTTGTTCTTCCA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAATCATTTACAAGTATaGCAAGAAAGTAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECNHLQV*QESSAF
Trigger: GAAGGCACTACTTTCTTGCCATACTTGTAAATGATT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATTTGCCTGCCCCAATaGACATTTGTTATGTCAATG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLICLPQ*TFVMSM
Trigger: CATTGACATAACAAATGTCCATTGGGGCAGGCAAAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGTGATAACTTGAGATaGTGTTCCAGTGGTAATTTT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCDNLR*CSSGNF
Trigger: AAAATTACCACTGGAACACCATCTCAAGTTATCACA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCACGCCACCACAACTaGCCAATTAAATTAAATTTG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPRHHN*PIKLNL
Trigger: CAAATTTAATTTAATTGGCCAGTTGTGGTGGCGTGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGCTTCCCAAGTAGCTaGGACCACAGGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVESFPSS*DHRPTP
Trigger: TGGCGTGGGCCTGTGGTCCCAGCTACTTGGGAAGCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCACCTCCCTGTCTATGTaGATTCTAACTGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLTSLSM*ILTVAQ
Trigger: CTGGGCCACAGTTAGAATCCACATAGACAGGGAGGT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAAATGTTGGACATTTaGAGGGCAATAGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKMLDI*RAIEYS
Trigger: AGAATACTCTATTGCCCTCCAAATGTCCAACATTTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATTTGTTGTCTAAACTaGGACACGTTTGGAAATAAG +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECICCLN*DTFGNK
Trigger: CTTATTTCCAAACGTGTCCCAGTTTAGACAACAAAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGCTGTTATCTGCTTTaGAGAAGACAAAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSCYLL*RRQSQF
Trigger: GAATTGGCTTTGTCTTCTCCAAAGCAGATAACAGCT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGTATTCACAGTTTCTaGTATAAGAGTAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCIHSF*YKSRCI
Trigger: TATGCACCTACTCTTATACCAGAAACTGTGAATACA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTTTCAGAATTCTAAGTaGCAAAACCTATCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FHELRPAIMPHTVSHGECFQNSK*QNLSGV
Trigger: AACACCTGATAGGTTTTGCCACTTAGAATTCTGAAA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGATTTGTTCTTCGCTaGACTTCATCTTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRFVLR*TSSFPS
Trigger: TGATGGAAAAGATGAAGTTCAGCGAAGAACAAATCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCATGTCCCCATAACTaGATTCTTCCTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPCPHN*ILPGSS
Trigger: ACTGCTACCAGGAAGAATTCAGTTATGGGGACATGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAACCTAATTTGCATTaGCAAGACATCCAGAATACC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKPNLH*QDIQNT
Trigger: GGTATTCTGGATGTCTTGTCAATGCAAATTAGGTTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAAACCTAATTTGCATTaGCAAGACATCCAGAATACC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHKPNLH*QDIQNT
Trigger: GGTATTCTGGATGTCTTGTCAATGCAAATTAGGTTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCATATTTTCTTGACATaGGGTAGCTTTTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHHIFLT*GSFLAA
Trigger: TGCTGCTAAAAAGCTACCTCATGTCAAGAAAATATG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCATATTTTCTTGACATaGGGTAGCTTTTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLHIFLT*GSFLAA
Trigger: TGCTGCTAAAAAGCTACCTCATGTCAAGAAAATATG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCCCCGAATATTAACTTaGTTGCCCTTTATTCTACAA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLPRILT*LPFILQ
Trigger: TTGTAGAATAAAGGGCAATCAAGTTAATATTCGGGG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGACAGAAAGTGGATTaGTGGAGATTTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGQKVD*WRFQRR
Trigger: CCTCCTCTGAAATCTCCATCAATCCACTTTCTGTCC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTGTGAGGATTTTTCGTaGAGAATGGTTGATGAACAA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHCEDFS*RMVDEQ
Trigger: TTGTTCATCAACCATTCTTCACGAAAAATCCTCACA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTGCTTCCTTCTGAGTaGCGCTCAATCCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELLPSE*RSIHPR
Trigger: CCGGGGATGGATTGAGCGGCACTCAGAAGGAAGCAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCAAGCTATATCCTGTaGGCTGGACCAGTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPSYIL*AGPVRG
Trigger: TCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTCTACTTCTGGCTCTaGCCAGTCTACTGCAATACC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLFYFWL*PVYCNT
Trigger: GGTATTGCAGTAGACTGGGCAGAGCCAGAAGTAGAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGGCTGCAGACACGGGTaGAGTTGCATTAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEGCRHG*SCIRDS
Trigger: GCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCCTCGGGCAGTCACTaGAAAAGTTGGGTAGACCTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPSGSH*KSWVDL
Trigger: GAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAATATCGGGCTGTATTaGAGTCAGAAACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLNIGLY*SQKHRR
Trigger: TCTTCTATGTTTCTGACTGCAATACAGCCCGATATT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTTATCTGCAGCGCTTaGGTAGACGATGACATCGAC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLFICSA*VDDDID
Trigger: GTCGATGTCATCGTCTACCCAAGCGCTGCAGATAAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATCAACTTCTACTTCTaGCTCTGCCCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLINFYF*LCPVYC
Trigger: GCAGTAGACTGGGCAGAGCCAGAAGTAGAAGTTGAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCAAGGTAGGTTGTGGTaGGATCATAAACTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLQGRLW*DHKLGP
Trigger: TGGGCCAAGTTTATGATCCCACCACAACCTACCTTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATCTCTTCTAATATCTaGGGAGCGAGTTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLISSNI*GASLIP
Trigger: AGGAATTAAACTCGCTCCCCAGATATTAGAAGAGAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGGATTGCAGGATTCTaGCTGGCTAGAGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLWIAGF*LARAGI
Trigger: TATTCCTGCTCTAGCCAGCCAGAATCCTGCAATCCA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCAGAGGTAAGACTCTaGAGTTTACTTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPEVRL*SLLGFP
Trigger: AGGGAAGCCAAGTAAACTCCAGAGTCTTACCTCTGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATAAACAATGGGGCCTaGATTTGTTTTAACCACATC +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLINNGA*ICFNHI
Trigger: GATGTGGTTAAAACAAATCCAGGCCCCATTGTTTAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAGGTCATTTCATGCTaGCATGATTATTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKVISC*HDYWKR
Trigger: CCTTTTCCAATAATCATGCCAGCATGAAATGACCTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAAGGTCATTTCATGCTaGCATGATTATTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHKVISC*HDYWKR
Trigger: CCTTTTCCAATAATCATGCCAGCATGAAATGACCTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAAACATAGTGTTGTTTaGCATGATACCAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHKHSVV*HDTRLE
Trigger: CTCCAATCTGGTATCATGCCAAACAACACTATGTTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAACCCTGAATGGGGCTaGTATTCTTCATTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLNPEWG*YSSFSK
Trigger: CTTGGAGAATGAAGAATATCAGCCCCATTCAGGGTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGACATTGGTAAACCCTaGATGGGGCTGATATTCTTC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLDIGKP*MGLIFF
Trigger: GAAGAATATCAGCCCCATTCAGGGTTTACCAATGTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTTCTCTGTTTACTATaGCCCTGCTCAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLLCLL*PCSVRK
Trigger: CTTTCTGACTGAGCAGGGTCATAGTAAACAGAGAAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGCTTGCTCTGCCATATaGAGGCAGAACTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVACSAI*RQNSGL
Trigger: GAGTCCTGAGTTCTGCCTTCATATGGCAGAGCAAGC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATTAGGGTTGCTCACTaGGTAATTTCAGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLIRVAH*VISEIP
Trigger: GGGGATCTCTGAAATTACTCAGTGAGCAACCCTAAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374001.6
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATTAAGTTGCTTGATTaGATTCTTGGCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLIKLLD*ILGFHF
Trigger: AAAGTGGAAGCCAAGAATGCAATCAAGCAACTTAAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCCTCGGGCAGTCACTaGAAAAGTTGGGTAGACCTC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPSGSH*KSWVDL
Trigger: GAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATCCCTCCCAAATCTTaGCAGCTACAAGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLIPPKS*QLQDLS
Trigger: AGAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTCCAGCAATCCTCCTaGCTTAGCTTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLQQSS*LSFPSS
Trigger: GCTACTTGGGAAGCTAAGGCAGGAGGATTGCTGGAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGGGCACATAAAGTTTaGAATCTCCCACAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGAHKV*NLPQMS
Trigger: GCTCATTTGTGGGAGATTGCAAACTTTATGTGCCCC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATGACTAGCTTGCTCTaGCATATGAAGGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLMTSLL*HMKAEL
Trigger: GAGTTCTGCCTTCATATGGCAGAGCAAGCTAGTCAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTTCAATTTTGAAAAATaGAGAATGGACCATGGGACT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHFNFEK*RMDHGT
Trigger: AGTCCCATGGTCCATTCTGCATTTTTCAAAATTGAA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTTCAATTTTGAAAAATaGAGAATGGACCATGGGACT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLFNFEK*RMDHGT
Trigger: AGTCCCATGGTCCATTCTGCATTTTTCAAAATTGAA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGAATTGCTGTGCTCATaGTCGCTTCTGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEELLCS*SLLALG
Trigger: GCCCAGAGCCAGAAGCGAGCATGAGCACAGCAATTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGGCAGTTGTCCACACTaGCACAAACCCCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEGSCPH*HKPLRG
Trigger: GCCTCTTAGGGGTTTGTGCCAGTGTGGACAACTGCC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCAAAGCCTCGGTTTTTaGTTTTATCTGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLQSLGF*FYLQRL
Trigger: CAAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTGGGAAATGAAGACTaGGAATTGCTGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLGNED*ELLHRS
Trigger: AGACCTATGCAGCAATTCCCAGTCTTCATTTCCCAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTGTCTCCTTTGACCTaGTATCCTCGACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLSPLT*YPRPRP
Trigger: AGGCCTGGGTCGAGGATACCAGGTCAAAGGAGACAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGGGACAGCATATCCTaGGAAAGCAGTAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRDSIS*ESSSSS
Trigger: GCTGCTGCTACTGCTTTCCCAGGATATGCTGTCCCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTGATTGCTAGATGGTaGGGTGGATACTGCAACAAT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLIARW*GGYCNN
Trigger: ATTGTTGCAGTATCCACCCCACCATCTAGCAATCAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAATCATTTACAAGTATaGCAAGAAAGTAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHNHLQV*QESSAF
Trigger: GAAGGCACTACTTTCTTGCCATACTTGTAAATGATT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAAAGTTAAGAAACTGTaGTTTGGAAACAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHKVKKL*FGNRFL
Trigger: AAGGAACCTGTTTCCAAACCACAGTTTCTTAACTTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAAATGTTGGACATTTaGAGGGCAATAGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKMLDI*RAIEYS
Trigger: AGAATACTCTATTGCCCTCCAAATGTCCAACATTTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGTGTGTGTGTGTGTTaGGGGCAGACACTGTATAAT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLCVCVC*GQTLYN
Trigger: ATTATACAGTGTCTGCCCCCAACACACACACACACA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTGTATTCACAGTTTCTaGTATAAGAGTAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHCIHSF*YKSRCI
Trigger: TATGCACCTACTCTTATACCAGAAACTGTGAATACA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTGAAAAATGCAGAATaGACCATGGGACTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLKNAE*TMGLCA
Trigger: GGCACACAGTCCCATGGTCCATTCTGCATTTTTCAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCGGAAAAGGTTTCCTTaGTTATGGCGAATTCAACGT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLRKRFP*LWRIQR
Trigger: ACGTTGAATTCGCCATAATCAAGGAAACCTTTTCCG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACGCTTGGGTAGACGATaGCATCGACAACACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVERLGRR*HRQHLQ
Trigger: CTGAAGGTGTTGTCGATGTCATCGTCTACCCAAGCG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTGGTTTTGCTAGGGTaGCTTCAATGGGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLVLLG*LQWGNH
Trigger: ATGGTTCCCCCATTGAAGTCACCCTAGCAAAACCAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTGGTGGCTGGGAAATaGAGACTGGGAATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLVAGK*RLGIAA
Trigger: TGCAGCAATTCCCAGTCTTCATTTCCCAGCCACCAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTCTTTTGTCTCCTTTaGCCTGGTATCCTCGACCCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLFCLL*PGILDP
Trigger: TGGGTCGAGGATACCAGGTCAAAGGAGACAAAAGAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAGGATTCATTGGGGTaGGCTCCATCCCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQDSLG*APSQVK
Trigger: TTTTACCTGGGATGGAGCTCACCCCAATGAATCCTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTCAGCTTTGGAGGTGTaGAAGGGTGGATTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVSALEV*KGGLQD
Trigger: ATCCTGCAATCCACCCTTTCACACCTCCAAAGCTGA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAATGGTGTGATAACTTaGGATGGTGTTCCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLNGVIT*DGVPVV
Trigger: TACCACTGGAACACCATCTCAAGTTATCACACCATT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCACCCAATCCCATTGCTaGTCAATTTCCTCCTACTTA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLTQSHC*SISSYL
Trigger: TAAGTAGGAGGAAATTGATCAGCAATGGGATTGGGT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGTCCAATAGCAGAGTaGAGCTGGTACACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVCPIAE*SWYTGC
Trigger: ACAGCCAGTGTACCAGCTGCACTCTGCTATTGGACA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGACACGGGTGCAGTTaGATTAGGGACAGCATATCC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRHGCS*IRDSIS
Trigger: GGATATGCTGTCCCTAATGCAACTGCACCCGTGTCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGACTCAGTAGAAATTTaGCTGCCCCAATGGACATTT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLDSVEI*LPQWTF
Trigger: AAATGTCCATTGGGGCAGGCAAATTTCTACTGAGTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTTGAGGCCAGGAATTaGTGTGCTCATGCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVFEARN*CAHARF
Trigger: GAAGCGAGCATGAGCACAGCAATTCCTGGCCTCAAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTGTCTCCTTTGACCTaGTATCCTCGACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELSPLT*YPRPRP
Trigger: AGGCCTGGGTCGAGGATACCAGGTCAAAGGAGACAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTGACAGGATTCATTaGGGTGAGCTCCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECDRIH*GELHPR
Trigger: CCTGGGATGGAGCTCACCCCAATGAATCCTGTCACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGGGACAGCATATCCTaGGAAAGCAGTAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVERDSIS*ESSSSS
Trigger: GCTGCTGCTACTGCTTTCCCAGGATATGCTGTCCCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAGCCAGGACTGTCCTaGAAAACCAGAATGTATTGT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKPGLS*KTRMYC
Trigger: ACAATACATTCTGGTTTTCCAGGACAGTCCTGGCTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCTACTAGTGCCCTGTaGATCTCTACAGACCAAGCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPTSAL*ISTDQA
Trigger: TGCTTGGTCTGTAGAGATCCACAGGGCACTAGTAGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGAACCTCTAAATTCCTaGACCAAGCTATATCCTGTG +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLEPLNS*TKLYPV
Trigger: CACAGGATATAGCTTGGTCCAGGAATTTAGAGGTTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTGGTGGCTGGGAAATaGAGACTGGGAATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELVAGK*RLGIAA
Trigger: TGCAGCAATTCCCAGTCTTCATTTCCCAGCCACCAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACAGGATTCATTGGGGTaGGCTCCATCCCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEQDSLG*APSQVK
Trigger: TTTTACCTGGGATGGAGCTCACCCCAATGAATCCTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTTCAGAGGAGGAAGTaGTCCATTCTTCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLFQRRK*SILLCL
Trigger: TAAACAGAGAAGAATGGATCACTTCCTCCTCTGAAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGTGTCACTCGGGTTATaGTCTAATCGTCATATCAAA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLVSLGL*SNRHIK
Trigger: TTTGATATGACGATTAGAGCATAACCCGAGTGACAC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTCTACTTCTGGCTCTaGCCAGTCTACTGCAATACC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVFYFWL*PVYCNT
Trigger: GGTATTGCAGTAGACTGGGCAGAGCCAGAAGTAGAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTTTCATAGCCTCAACTaGATCTTCTCGGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLFHSLN*IFSVTE
Trigger: TTCAGTAACCGAGAAGATGCAGTTGAGGCTATGAAA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTCCAATAGCAGAGTaGAGCTGGTACACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECPIAE*SWYTGC
Trigger: ACAGCCAGTGTACCAGCTGCACTCTGCTATTGGACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGGCTGCATACGTCTTTaGTTCATCCACAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVGCIRL*FIHKGT
Trigger: AGTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAGGGTGTATTCGGCTaGATACGTCTTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQGVFG*IRLCFI
Trigger: GATGAAGCAAAGACGTATGCAGCCGAATACACCCTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGACACGGGTGCAGTTaGATTAGGGACAGCATATCC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVERHGCS*IRDSIS
Trigger: GGATATGCTGTCCCTAATGCAACTGCACCCGTGTCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTGATTATTACTGACTaGCCAGGTCTGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLIITD*PGLLHP
Trigger: GGGATGGAGCAGACCTGGGCAGTCAGTAATAATCAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTGATTGACAATGGTTaGACGTCAGGTAGGAATATT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLIDNG*TSGRNI
Trigger: AATATTCCTACCTGACGTGCAACCATTGTCAATCAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATCAACTTCTACTTCTaGCTCTGCCCAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVINFYF*LCPVYC
Trigger: GCAGTAGACTGGGCAGAGCCAGAAGTAGAAGTTGAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGTGCAGCTGGTACACTaGCTGTCCCCAGTTATTTTT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVVQLVH*LSPVIF
Trigger: AAAAATAACTGGGGACAGCCAGTGTACCAGCTGCAC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAGAATAGCTGTCTTTaGTCTTGTCCAATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKNSCL*SCPIAE
Trigger: CTCTGCTATTGGACAAGACCAAAGACAGCTATTCTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGGGTTGCTCACTCTTTaGAGGCAAAGTCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEGLLTL*RQSLQS
Trigger: AGACTGTAGACTTTGCCTTCAAAGAGTGAGCAACCC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTGGACAGTCTTTCATaGGCTCAGGCCTGCAATCAT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELDSLS*AQACNH
Trigger: ATGATTGCAGGCCTGAGCTCATGAAAGACTGTCCAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGGCTGAAGAGAGGTTaGAACCACAAAATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRLKRG*NHKILD
Trigger: GTCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGTGGACTAATGAGCTaGATAAACAATGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECGLMS*INNGAW
Trigger: CCAGGCCCCATTGTTTATTCAGCTCATTAGTCCACA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAGGACTCAGGTATGGTaGAGCTGCCTGATACTTACT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVERTQVW*SCLILT
Trigger: AGTAAGTATCAGGCAGCTTCACCATACCTGAGTCCT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAACCTAATTTGCATTaGCAAGACATCCAGAATACC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKPNLH*QDIQNT
Trigger: GGTATTCTGGATGTCTTGTCAATGCAAATTAGGTTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCCCGAATATTAACTTaGTTGCCCTTTATTCTACAA +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPRILT*LPFILQ
Trigger: TTGTAGAATAAAGGGCAATCAAGTTAATATTCGGGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGACATTGGTAAACCCTaGATGGGGCTGATATTCTTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVDIGKP*MGLIFF
Trigger: GAAGAATATCAGCCCCATTCAGGGTTTACCAATGTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGGACAGAAAGTGGATTaGTGGAGATTTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEGQKVD*WRFQRR
Trigger: CCTCCTCTGAAATCTCCATCAATCCACTTTCTGTCC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGGCTGCATACGTCTTTaGTTCATCCACAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEGCIRL*FIHKGT
Trigger: AGTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGGGGCACATAAAGTTTaGAATCTCCCACAAATGAGC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVGAHKV*NLPQMS
Trigger: GCTCATTTGTGGGAGATTGCAAACTTTATGTGCCCC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATGACTAGCTTGCTCTaGCATATGAAGGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVMTSLL*HMKAEL
Trigger: GAGTTCTGCCTTCATATGGCAGAGCAAGCTAGTCAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAAAGCCTCGGTTTTTaGTTTTATCTGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQSLGF*FYLQRL
Trigger: CAAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTCCAAGGTAGGTTGTaGTGGGATCATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELQGRL*WDHKLG
Trigger: GCCAAGTTTATGATCCCACCACAACCTACCTTGGAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTGGGAAATGAAGACTaGGAATTGCTGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLGNED*ELLHRS
Trigger: AGACCTATGCAGCAATTCCCAGTCTTCATTTCCCAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATGTCCTTTGGTGGCTaGGAAATGAAGACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVMSFGG*EMKTGN
Trigger: ATTCCCAGTCTTCATTTCCCAGCCACCAAAGGACAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGTGCAGCTGGTACACTaGCTGTCCCCAGTTATTTTT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEVQLVH*LSPVIF
Trigger: AAAAATAACTGGGGACAGCCAGTGTACCAGCTGCAC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGGATTGCAGGATTCTaGCTGGCTAGAGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEWIAGF*LARAGI
Trigger: TATTCCTGCTCTAGCCAGCCAGAATCCTGCAATCCA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACAACTTTTGGGGCAGTaGCTCTCCAGCTTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEQLLGQ*LSSFLL
Trigger: TAACAGAAAGCTGGAGAGCCACTGCCCCAAAAGTTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATAAACAATGGGGCCTaGATTTGTTTTAACCACATC +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLINNGA*ICFNHI
Trigger: GATGTGGTTAAAACAAATCCAGGCCCCATTGTTTAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
3UTR CAA 72 bp AGTTTCAGCTGTAGCCTTGGAGGCTTTGTTATCTCATaGGAGTTAGGACAACTGAAATGTTACAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: SFSCSLGGFVIS*ELGQLKCYKYF
Trigger: GAAGTACTTGTAACATTTCAGTTGTCCTAACTCCAATGAGATAACAAAGCCTCCAAGGCTACAGCTGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCGGAAAAGGTTTCCTTaGTTATGGCGAATTCAACGT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRKRFP*LWRIQR
Trigger: ACGTTGAATTCGCCATAATCAAGGAAACCTTTTCCG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCATCCCCGGATTTGTaGTTTGATTCCATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPSPDL*FDSIES
Trigger: ACTCTCAATGGAATCAAATCACAAATCCGGGGATGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTAACAAAACCTGATTaGCAATGGTTGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLTKPD*QWLHVR
Trigger: CCTGACGTGCAACCATTGTCAATCAGGTTTTGTTAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTTCTCTGTTTACTATaGCCCTGCTCAGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELLCLL*PCSVRK
Trigger: CTTTCTGACTGAGCAGGGTCATAGTAAACAGAGAAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATTAAGTTGCTTGATTaGATTCTTGGCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLIKLLD*ILGFHF
Trigger: AAAGTGGAAGCCAAGAATGCAATCAAGCAACTTAAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGTTTTTGGTTTTATCTaGAGCGCTTGGGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVVFGFI*SAWVDD
Trigger: ATCGTCTACCCAAGCGCTGCAGATAAAACCAAAAAC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACAAAGCCTCGGTTTTTaGTTTTATCTGCAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEQSLGF*FYLQRL
Trigger: CAAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCTCTCCACAGCACCTaGTTTGATATTGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPLHST*FDIVEF
Trigger: GAATTCAACAATATCAAACCAGGTGCTGTGGAGAGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTGGGAAATGAAGACTaGGAATTGCTGCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELGNED*ELLHRS
Trigger: AGACCTATGCAGCAATTCCCAGTCTTCATTTCCCAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGTCACTGCAAAAGTTaGGTAGACCTCATAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVSHCKS*VDLIGC
Trigger: ACAACCTATGAGGTCTACCCAACTTTTGCAGTGACT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATCATCAGATATTTCTaGAGAAGAGGCCTAGGACTC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVIIRYF*RRGLGL
Trigger: GAGTCCTAGGCCTCTTCTCCAGAAATATCTGATGAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAAACCAAGGAGAACTaGGGGCACATAAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKTKEN*GHIKFA
Trigger: TGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAGCCAGGACTGTCCTaGAAAACCAGAATGTATTGT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKPGLS*KTRMYC
Trigger: ACAATACATTCTGGTTTTCCAGGACAGTCCTGGCTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGAACCTCTAAATTCCTaGACCAAGCTATATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVEPLNS*TKLYPV
Trigger: CACAGGATATAGCTTGGTCCAGGAATTTAGAGGTTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCCTTTTCCTCTTTGTaGCTTTGTGTATCACAAAAG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPFSSL*LCVSQK
Trigger: CTTTTGTGATACACAAAGTCACAAAGAGGAAAAGGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACACAGTGAGCCATGGTaGATGCATTTTGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEHSEPW*MHFEKQ
Trigger: TTGCTTTTCAAAATGCATTCACCATGGCTCACTGTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATGGAATTTTCAGGCTaGAGAGAGGTTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEMEFSG*REVETT
Trigger: TGTGGTTTCAACCTCTCTTCAGCCTGAAAATTCCAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAACCTAGGTGCACATTaGAATCACCTAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVENLGAH*NHLGII
Trigger: AATGATCCCTAGGTGATTTCAATGTGCACCTAGGTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAATGGTGTGATAACTTaGGATGGTGTTCCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVENGVIT*DGVPVV
Trigger: TACCACTGGAACACCATCTCAAGTTATCACACCATT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTAACAAAACCTGATTaGCAATGGTTGCACGTCAGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELTKPD*QWLHVR
Trigger: CCTGACGTGCAACCATTGTCAATCAGGTTTTGTTAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAGTTTAACAAAACCTaGTTGACAATGGTTGCACGT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQFNKT*LTMVAR
Trigger: ACGTGCAACCATTGTCAATCAGGTTTTGTTAAACTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCAGGCATCTTCAGATaGATGAGGTATTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPGIFR*MRYFGF
Trigger: AAAACCAAAATACCTCATTCATCTGAAGATGCCTGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTTCAGAGGAGGAAGTaGTCCATTCTTCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVFQRRK*SILLCL
Trigger: TAAACAGAGAAGAATGGATCACTTCCTCCTCTGAAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTGATTGACAATGGTTaGACGTCAGGTAGGAATATT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLIDNG*TSGRNI
Trigger: AATATTCCTACCTGACGTGCAACCATTGTCAATCAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTTTGTCCATTTTCCTaGACCAAGCTATATCCTGTG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELCPFS*TKLYPV
Trigger: CACAGGATATAGCTTGGTCCAGGAAAATGGACAAAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCTCTCCACAGCACCTaGTTTGATATTGTTGAATTC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPLHST*FDIVEF
Trigger: GAATTCAACAATATCAAACCAGGTGCTGTGGAGAGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAGAATAGCTGTCTTTaGTCTTGTCCAATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKNSCL*SCPIAE
Trigger: CTCTGCTATTGGACAAGACCAAAGACAGCTATTCTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGACAAATCGACTGGATaGAATTTTCAGGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEDKSTG*NFQAEE
Trigger: CTCTTCAGCCTGAAAATTCCATCCAGTCGATTTGTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAAACCAAGGAGAACTaGGGGCACATAAAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKTKEN*GHIKFA
Trigger: TGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAGCCAGGACTGTCCTaGAAAACCAGAATGTATTGT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKPGLS*KTRMYC
Trigger: ACAATACATTCTGGTTTTCCAGGACAGTCCTGGCTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCATATTTTCTTGACATaGGGTAGCTTTTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVHIFLT*GSFLAA
Trigger: TGCTGCTAAAAAGCTACCTCATGTCAAGAAAATATG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCCCGAATATTAACTTaGTTGCCCTTTATTCTACAA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPRILT*LPFILQ
Trigger: TTGTAGAATAAAGGGCAATCAAGTTAATATTCGGGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCAGGCATCTTCAGATaGATGAGGTATTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPGIFR*MRYFGF
Trigger: AAAACCAAAATACCTCATTCATCTGAAGATGCCTGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR TCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGTGAGGATTTTTCGTaGAGAATGGTTGATGAACAA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVCEDFS*RMVDEQ
Trigger: TTGTTCATCAACCATTCTTCACGAAAAATCCTCACA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTTCATAGCCTCAACTaGATCTTCTCGGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEFHSLN*IFSVTE
Trigger: TTCAGTAACCGAGAAGATGCAGTTGAGGCTATGAAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTGATTGACAATGGTTaGACGTCAGGTAGGAATATT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELIDNG*TSGRNI
Trigger: AATATTCCTACCTGACGTGCAACCATTGTCAATCAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAATATCGGGCTGTATTaGAGTCAGAAACATAGAAGA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVNIGLY*SQKHRR
Trigger: TCTTCTATGTTTCTGACTGCAATACAGCCCGATATT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAGTCTACAGTCTTCTaGCCAAGTTGTAGATTTGTT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKSTVF*PSCRFV
Trigger: AACAAATCTACAACTTGGCCAGAAGACTGTAGACTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATCTCTTCTAATATCTaGGGAGCGAGTTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVISSNI*GASLIP
Trigger: AGGAATTAAACTCGCTCCCCAGATATTAGAAGAGAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGAAACCACAAAATCTTaGACAGTCTTTCATGAGCTC +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEETTKS*TVFHEL
Trigger: GAGCTCATGAAAGACTGTCCAAGATTTTGTGGTTTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATAAACAATGGGGCCTaGATTTGTTTTAACCACATC +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVINNGA*ICFNHI
Trigger: GATGTGGTTAAAACAAATCCAGGCCCCATTGTTTAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAACATAGTGTTGTTTaGCATGATACCAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKHSVV*HDTRLE
Trigger: CTCCAATCTGGTATCATGCCAAACAACACTATGTTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCACGCCACCACAACTaGCCAATTAAATTAAATTTG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPRHHN*PIKLNL
Trigger: CAAATTTAATTTAATTGGCCAGTTGTGGTGGCGTGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATTAAGTTGCTTGATTaGATTCTTGGCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVIKLLD*ILGFHF
Trigger: AAAGTGGAAGCCAAGAATGCAATCAAGCAACTTAAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTCAATTTTGAAAAATaGAGAATGGACCATGGGACT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVFNFEK*RMDHGT
Trigger: AGTCCCATGGTCCATTCTGCATTTTTCAAAATTGAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATCTCTTCTAATATCTaGGGAGCGAGTTTAATTCCT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEISSNI*GASLIP
Trigger: AGGAATTAAACTCGCTCCCCAGATATTAGAAGAGAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAGGTCATTTCATGCTaGCATGATTATTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKVISC*HDYWKR
Trigger: CCTTTTCCAATAATCATGCCAGCATGAAATGACCTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAAATGTTGGACATTTaGAGGGCAATAGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKMLDI*RAIEYS
Trigger: AGAATACTCTATTGCCCTCCAAATGTCCAACATTTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATTTGTTGTCTAAACTaGGACACGTTTGGAAATAAG +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVICCLN*DTFGNK
Trigger: CTTATTTCCAAACGTGTCCCAGTTTAGACAACAAAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGTATTCACAGTTTCTaGTATAAGAGTAGGTGCATA +
Preference number: 4 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVCIHSF*YKSRCI
Trigger: TATGCACCTACTCTTATACCAGAAACTGTGAATACA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR GCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAATTAAGTTGCTTGATTaGATTCTTGGCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEIKLLD*ILGFHF
Trigger: AAAGTGGAAGCCAAGAATGCAATCAAGCAACTTAAT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CCA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAAAAGTTAAGAAACTGTaGTTTGGAAACAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEKVKKL*FGNRFL
Trigger: AAGGAACCTGTTTCCAAACCACAGTTTCTTAACTTT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 90 bp CTGGACCAAGCTATATCCTGTGCGCTGGACCAGTGCGCGGAGGGCTaGTTCCTTCTGAGTGCCGCTCAATCCATCCCCGGATTTGTGATT +
Preference number: 5 (lower is better)
Translates to: LDQAISCALDQCAEG*FLLSAAQSIPGFVI
Trigger: AATCACAAATCCGGGGATGGATTGAGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTGGTCCAGCGCACAGGATATAGCTTGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
CDS CCA 90 bp CTGGGCTGCAGACACGGGTGCAGTTGCATTAGGGACAGCATATCCTaGGAAAGCAGTAGCAGCAGCAGCAGCAGTAGCCATGGTGCCATC +
Preference number: 5 (lower is better)
Translates to: LGCRHGCSCIRDSIS*ESSSSSSSSSHGAI
Trigger: GATGGCACCATGGCTACTGCTGCTGCTGCTGCTACTGCTTTCCCAGGATATGCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 90 bp GTAGCCATGGTGCCATCGCCTCCATCAGTGGGGATGCCCAGGGTCTaGAGGGTGTATTCGGCTGCATACGTCTTTGCTTCATCCACAAAG +
Preference number: 5 (lower is better)
Translates to: VAMVPSPPSVGMPRV*RVYSAAYVFASSTK
Trigger: CTTTGTGGATGAAGCAAAGACGTATGCAGCCGAATACACCCTGCAGACCCTGGGCATCCCCACTGATGGAGGCGATGGCACCATGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGGGTTACCGCTTGCTaGAGCTGGGCTGCAGACACG +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRVTAC*SWAADT
Trigger: CGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 90 bp ATCCTGTGCGCTGGACCAGTGCGCGGAGGGCTGCTTCCTTCTGAGTaGCGCTCAATCCATCCCCGGATTTGTGATTTGATTCCATTGAGA +
Preference number: 5 (lower is better)
Translates to: ILCAGPVRGGLLPSE*RSIHPRICDLIPLR
Trigger: TCTCAATGGAATCAAATCACAAATCCGGGGATGGATTGAGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTGGTCCAGCGCACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
CDS GCA 90 bp TTGTCCAAGGGTTACCGCTTGCTTGAGCTGGGCTGCAGACACGGGTaGAGTTGCATTAGGGACAGCATATCCTGGGAAAGCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LSKGYRLLELGCRHG*SCIRDSISWESSSS
Trigger: GCTGCTACTGCTTTCCCAGGATATGCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTCCAAGGGTTACCGCTaGCTTGAGCTGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECSKGYR*LELGCR
Trigger: TCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGGGTTACCGCTTGCTaGAGCTGGGCTGCAGACACG +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHRVTAC*SWAADT
Trigger: CGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 90 bp GGCCAGGAATTGCTGTGCTCATGCTCGCTTCTGGCTCTGGGCATGTaGCCAGACACACTGCTTCCATCTATAGGAACCTCTAAATTCCTG +
Preference number: 5 (lower is better)
Translates to: GQELLCSCSLLALGM*PDTLLPSIGTSKFL
Trigger: CAGGAATTTAGAGGTTCCTATAGATGGAAGCAGTGTGTCTGGGCACATGCCCAGAGCCAGAAGCGAGCATGAGCACAGCAATTCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373995.7
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCGGCTGCATACGTCTTaGCTTCATCCACAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRLHTS*LHPQRH
Trigger: GTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCCG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTCCAAGGGTTACCGCTaGCTTGAGCTGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSKGYR*LELGCR
Trigger: TCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTCCAAGGGTTACCGCTaGCTTGAGCTGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSKGYR*LELGCR
Trigger: TCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGTTTTGTAGCACCGTaGCCCTCCCCTCACTTCATC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCFVAP*PSPHFI
Trigger: GATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCACCTCAGAGAGACATaGGTAAACCCTGAATGGGGC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECHLRET*VNPEWG
Trigger: GCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGAGCTATCTTTTGTCTaGCCCCACCACCTAACCTGG +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECELSFV*PHHLTW
Trigger: CCAGGTTAGGTGGTGGGGCAAGACAAAAGATAGCTC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CCA 90 bp GTATATGCTGCTAAGTCTTGTCCAAGGGTTACCGCTTGCTTGAGCTaGGCTGCAGACACGGGTGCAGTTGCATTAGGGACAGCATATCCT +
Preference number: 5 (lower is better)
Translates to: VYAAKSCPRVTACLS*AADTGAVALGTAYP
Trigger: AGGATATGCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGACAAGACTTAGCAGCATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGTAGGTATACTCTCCTaGCAGCATGGTGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLVGILS*QHGAPS
Trigger: GGAAGGGGCACCATGCTGCAAGGAGAGTATACCTAC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGTAGGTATACTCTCCTaGCAGCATGGTGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHVGILS*QHGAPS
Trigger: GGAAGGGGCACCATGCTGCAAGGAGAGTATACCTAC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGGGTTGCTCACTCTTaGAAGGCAAAGTCTACAGTC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRVAHS*KAKSTV
Trigger: GACTGTAGACTTTGCCTTCAAAGAGTGAGCAACCCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCACAAATAATCGGCAGTaGTCCACACTGGCACAAACC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECTNNRQ*STLAQT
Trigger: GGTTTGTGCCAGTGTGGACAACTGCCGATTATTTGT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGCAAAGCCTCGGTTTTaGGTTTTATCTGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECAKPRF*VLSAAL
Trigger: AAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTGC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGAGCTCCAAGGTAGGTaGTGGTGGGATCATAAACTT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECELQGR*WWDHKL
Trigger: AAGTTTATGATCCCACCACAACCTACCTTGGAGCTC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCGGCTGCATACGTCTTaGCTTCATCCACAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHRLHTS*LHPQRH
Trigger: GTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCCG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCGGCTGCATACGTCTTaGCTTCATCCACAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRLHTS*LHPQRH
Trigger: GTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCCG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCACCTCAGAGAGACATaGGTAAACCCTGAATGGGGC +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHHLRET*VNPEWG
Trigger: GCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCACCTCAGAGAGACATaGGTAAACCCTGAATGGGGC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLHLRET*VNPEWG
Trigger: GCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGAGCTATCTTTTGTCTaGCCCCACCACCTAACCTGG +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHELSFV*PHHLTW
Trigger: CCAGGTTAGGTGGTGGGGCAAGACAAAAGATAGCTC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCGGAAAAGGTTTCCTaGATTATGGCGAATTCAACG +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPEKVS*IMANST
Trigger: CGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCAGGCTGAAGAGAGGTaGAAACCACAAAATCTTGGA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECQAEER*KPQNLG
Trigger: TCCAAGATTTTGTGGTTTCAACCTCTCTTCAGCCTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGGCATGATACCAGATaGGAGGATATCCTAGTCATC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECWHDTR*EDILVI
Trigger: GATGACTAGGATATCCTCCAATCTGGTATCATGCCA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAAATCCACAGGTTTTaGGCACAGCACTGTTATCTG +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKIHRF*AQHCYL
Trigger: CAGATAACAGTGCTGTGCCAAAAACCTGTGGATTTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGGGTTGCTCACTCTTaGAAGGCAAAGTCTACAGTC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRVAHS*KAKSTV
Trigger: GACTGTAGACTTTGCCTTCAAAGAGTGAGCAACCCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCCCCGGATTTGTGATTaGATTCCATTGAGAGTGATT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECPRICD*IPLRVI
Trigger: AATCACTCTCAATGGAATCAAATCACAAATCCGGGG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATACAAATAATCGGCAGTaGTCCACACTGGCACAAACC +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHTNNRQ*STLAQT
Trigger: GGTTTGTGCCAGTGTGGACAACTGCCGATTATTTGT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGACAAATAATCGGCAGTaGTCCACACTGGCACAAACC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLTNNRQ*STLAQT
Trigger: GGTTTGTGCCAGTGTGGACAACTGCCGATTATTTGT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGCAAAGCCTCGGTTTTaGGTTTTATCTGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLAKPRF*VLSAAL
Trigger: AAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTGC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGAGCTCCAAGGTAGGTaGTGGTGGGATCATAAACTT +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLELQGR*WWDHKL
Trigger: AAGTTTATGATCCCACCACAACCTACCTTGGAGCTC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTCCAAGGGTTACCGCTaGCTTGAGCTGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSKGYR*LELGCR
Trigger: TCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGGTAGACCTCATAGGTaGTATATGCTGCTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECGRPHR*YMLLSL
Trigger: AAGACTTAGCAGCATATACAACCTATGAGGTCTACC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAACCTAGGTGCACATaGAAATCACCTAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKPRCT*KSPRDH
Trigger: ATGATCCCTAGGTGATTTCAATGTGCACCTAGGTTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGATACCCAATCCCATaGCTGATCAATTTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRYPIP*LINFLL
Trigger: TAGGAGGAAATTGATCAGCAATGGGATTGGGTATCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTCCCCAAACATAGTGTaGTTTGGCATGATACCAGAT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECSPNIV*FGMIPD
Trigger: ATCTGGTATCATGCCAAACAACACTATGTTTGGGGA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGCAAGGGAATTAGTGTaGGAGCAAATTTGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECARELV*EQICEA
Trigger: TGCTTCACAAATTTGCTCCAACACTAATTCCCTTGC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCGGAAAAGGTTTCCTaGATTATGGCGAATTCAACG +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPEKVS*IMANST
Trigger: CGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTCCACAGCACCTGGTTaGATATTGTTGAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECSTAPG*ILLNSF
Trigger: AAAGGAATTCAACAATATCAAACCAGGTGCTGTGGA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGTAGGTATACTCTCCTaGCAGCATGGTGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLVGILS*QHGAPS
Trigger: GGAAGGGGCACCATGCTGCAAGGAGAGTATACCTAC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGTGGGATCATAAACTaGGCCCAAAGAGTAGGTATA +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGGIIN*AQRVGI
Trigger: TATACCTACTCTTTGGGCCAAGTTTATGATCCCACC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGCCCCAATGGACATTaGTTATGTCAATGTAATCAC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCPNGH*LCQCNH
Trigger: GTGATTACATTGACATAACAAATGTCCATTGGGGCA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGGCATGATACCAGATaGGAGGATATCCTAGTCATC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLWHDTR*EDILVI
Trigger: GATGACTAGGATATCCTCCAATCTGGTATCATGCCA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCAGACACTGTATAATTaGTTGTCTAAACTGGGACAC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECQTLYN*LSKLGH
Trigger: GTGTCCCAGTTTAGACAACAAATTATACAGTGTCTG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAAGCTGTTATCTGCTTaGGAGAAGACAAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECKLLSA*EKTKPI
Trigger: AATTGGCTTTGTCTTCTCCAAAGCAGATAACAGCTT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGGACAGAAAGTGGATaGATGGAGATTTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLWTESG*MEISEE
Trigger: CTCCTCTGAAATCTCCATCAATCCACTTTCTGTCCA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCATAATAATGACTAGCTaGCTCTGCCATATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECIIMTS*LCHMKA
Trigger: TGCCTTCATATGGCAGAGCAAGCTAGTCATTATTAT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGTCTTTGTCTCTTTTTaGGTACCTCAGCTAACTAAC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECVFVSF*VPQLTN
Trigger: GTTAGTTAGCTGAGGTACCAAAAAAGAGACAAAGAC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CCA 90 bp CTGGCTAGAGCAGGAATAGTTATTTTGTACAAGAATAGCTGTCTTTaGTCTTGTCCAATAGCAGAGTGCAGCTGGTACACTGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: LARAGIVILYKNSCL*SCPIAECSWYTGCP
Trigger: GGGACAGCCAGTGTACCAGCTGCACTCTGCTATTGGACAAGACCAAAGACAGCTATTCTTGTACAAAATAACTATTCCTGCTCTAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCCCCGGATTTGTGATTaGATTCCATTGAGAGTGATT +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHPRICD*IPLRVI
Trigger: AATCACTCTCAATGGAATCAAATCACAAATCCGGGG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGCATATCCTCTATTGTaGCCATTAAAATCCATCATC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECAYPLL*PLKSII
Trigger: GATGATGGATTTTAATGGCAACAATAGAGGATATGC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCTGCTTGATTGCATTCTaGGCTTCCACTTTATTTGAA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECCLIAF*ASTLFE
Trigger: TTCAAATAAAGTGGAAGCCAAGAATGCAATCAAGCA...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGAACCATCCAGCACCTaGCCATTTAAAGCTTTCATA +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLEPSST*PFKAFI
Trigger: TATGAAAGCTTTAAATGGCAAGGTGCTGGATGGTTC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAGGGTTACCGCTTGCTaGAGCTGGGCTGCAGACACG +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVRVTAC*SWAADT
Trigger: CGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGGTAGACCTCATAGGTaGTATATGCTGCTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHGRPHR*YMLLSL
Trigger: AAGACTTAGCAGCATATACAACCTATGAGGTCTACC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCGACTTTTCAGTCAATTaGCTGAAAGGAAGAAGTATC +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECDFSVN*LKGRSI
Trigger: GATACTTCTTCCTTTCAGCAAATTGACTGAAAAGTC...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGTTTTGTAGCACCGTaGCCCTCCCCTCACTTCATC +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLCFVAP*PSPHFI
Trigger: GATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCAGGAGTAACAGGTATTaGGTGTTGGACTTAAGATTA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECRSNRY*VLDLRL
Trigger: TAATCTTAAGTCCAACACCAAATACCTGTTACTCCT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAAACCTAGGTGCACATaGAAATCACCTAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHKPRCT*KSPRDH
Trigger: ATGATCCCTAGGTGATTTCAATGTGCACCTAGGTTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTCCCCAAACATAGTGTaGTTTGGCATGATACCAGAT +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLSPNIV*FGMIPD
Trigger: ATCTGGTATCATGCCAAACAACACTATGTTTGGGGA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTCCCCAAACATAGTGTaGTTTGGCATGATACCAGAT +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSPNIV*FGMIPD
Trigger: ATCTGGTATCATGCCAAACAACACTATGTTTGGGGA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCACCCCGAATATTAACTaGATTGCCCTTTATTCTACA +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECTPNIN*IALYST
Trigger: TGTAGAATAAAGGGCAATCAAGTTAATATTCGGGGT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCACCTCAGAGAGACATaGGTAAACCCTGAATGGGGC +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLHLRET*VNPEWG
Trigger: GCCCCATTCAGGGTTTACCAATGTCTCTCTGAGGTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCACACTGTATAATTTGTaGTCTAAACTGGGACACGTT +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECTLYNL*SKLGHV
Trigger: AACGTGTCCCAGTTTAGACAACAAATTATACAGTGT...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGAGCTATCTTTTGTCTaGCCCCACCACCTAACCTGG +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLELSFV*PHHLTW
Trigger: CCAGGTTAGGTGGTGGGGCAAGACAAAAGATAGCTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGCAAGGGAATTAGTGTaGGAGCAAATTTGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHARELV*EQICEA
Trigger: TGCTTCACAAATTTGCTCCAACACTAATTCCCTTGC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGCAAGGGAATTAGTGTaGGAGCAAATTTGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLARELV*EQICEA
Trigger: TGCTTCACAAATTTGCTCCAACACTAATTCCCTTGC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTTCATGAGCTCAGGCCTGCAATCATGCCCCACACAGTGAGCCATGGTGAATGCCTTTTAAAAGGCTTATaGTATCAGTCCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: FHELRPAIMPHTVSHGECLLKGL*YQSRVW
Trigger: CCAAACTCTGGACTGATACAATAAGCCTTTTAAAAG...GCATTCACCATGGCTCACTGTGTGGGGCATGATTGCAGGCCTGAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATTCCACAGCACCTGGTTaGATATTGTTGAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHSTAPG*ILLNSF
Trigger: AAAGGAATTCAACAATATCAAACCAGGTGCTGTGGA...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTCCAAGGGTTACCGCTaGCTTGAGCTGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVSKGYR*LELGCR
Trigger: TCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCATCCCTCCCAAATCTaGCCAGCTACAAGATCTCTC +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLHPSQI*PATRSL
Trigger: GAGAGATCTTGTAGCTGGCAAGATTTGGGAGGGATG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGCAGACACTGTATAATTaGTTGTCTAAACTGGGACAC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLQTLYN*LSKLGH
Trigger: GTGTCCCAGTTTAGACAACAAATTATACAGTGTCTG...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATATAATAATGACTAGCTaGCTCTGCCATATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHIIMTS*LCHMKA
Trigger: TGCCTTCATATGGCAGAGCAAGCTAGTCATTATTAT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGATAATAATGACTAGCTaGCTCTGCCATATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLIIMTS*LCHMKA
Trigger: TGCCTTCATATGGCAGAGCAAGCTAGTCATTATTAT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGTATCAGTCCAGAGTTaGGCAATAATAGTGGAAACT +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLVSVQS*AIIVET
Trigger: AGTTTCCACTATTATTGCCAAACTCTGGACTGATAC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATGTCTTTGTCTCTTTTTaGGTACCTCAGCTAACTAAC +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHVFVSF*VPQLTN
Trigger: GTTAGTTAGCTGAGGTACCAAAAAAGAGACAAAGAC...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGTCTTTGTCTCTTTTTaGGTACCTCAGCTAACTAAC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLVFVSF*VPQLTN
Trigger: GTTAGTTAGCTGAGGTACCAAAAAAGAGACAAAGAC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTTTTCCAGCAAAGTTaGCAAAATGATGGACTGCAA +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLFQQS*QNDGLQ
Trigger: TTGCAGTCCATCATTTTGCAAACTTTGCTGGAAAAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGGCATATCCTCTATTGTaGCCATTAAAATCCATCATC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLAYPLL*PLKSII
Trigger: GATGATGGATTTTAATGGCAACAATAGAGGATATGC...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGTGCTTGATTGCATTCTaGGCTTCCACTTTATTTGAA +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLCLIAF*ASTLFE
Trigger: TTCAAATAAAGTGGAAGCCAAGAATGCAATCAAGCA...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGTAGGTATACTCTCCTaGCAGCATGGTGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVVGILS*QHGAPS
Trigger: GGAAGGGGCACCATGCTGCAAGGAGAGTATACCTAC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGAGCTCCAAGGTAGGTaGTGGTGGGATCATAAACTT +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLELQGR*WWDHKL
Trigger: AAGTTTATGATCCCACCACAACCTACCTTGGAGCTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCAGTCACTGCAAAAGTaGGGTAGACCTCATAGGTTG +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLQSLQK*GRPHRL
Trigger: CAACCTATGAGGTCTACCCAACTTTTGCAGTGACTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAGGAGTAACAGGTATTaGGTGTTGGACTTAAGATTA +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLRSNRY*VLDLRL
Trigger: TAATCTTAAGTCCAACACCAAATACCTGTTACTCCT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAGGAGTAACAGGTATTaGGTGTTGGACTTAAGATTA +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHRSNRY*VLDLRL
Trigger: TAATCTTAAGTCCAACACCAAATACCTGTTACTCCT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGACCCCGAATATTAACTaGATTGCCCTTTATTCTACA +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLTPNIN*IALYST
Trigger: TGTAGAATAAAGGGCAATCAAGTTAATATTCGGGGT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATACCCCGAATATTAACTaGATTGCCCTTTATTCTACA +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHTPNIN*IALYST
Trigger: TGTAGAATAAAGGGCAATCAAGTTAATATTCGGGGT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATAAAAATGTTGGACATTaGGAGGGCAATAGAGTATTC +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHKNVGH*EGNRVF
Trigger: GAATACTCTATTGCCCTCCAAATGTCCAACATTTTT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGAAAAATGTTGGACATTaGGAGGGCAATAGAGTATTC +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLKNVGH*EGNRVF
Trigger: GAATACTCTATTGCCCTCCAAATGTCCAACATTTTT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp ATGGCACACCTAAGAACCTCCCTGTCTATGTGGATTCTAACTGTGGCCCAGTTGACACTGTATAATTTGTaGTCTAAACTGGGACACGTT +
Preference number: 5 (lower is better)
Translates to: MAHLRTSLSMWILTVAQLTLYNL*SKLGHV
Trigger: AACGTGTCCCAGTTTAGACAACAAATTATACAGTGT...CAACTGGGCCACAGTTAGAATCCACATAGACAGGGAGGTTCTTAGGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATACACTGTATAATTTGTaGTCTAAACTGGGACACGTT +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHTLYNL*SKLGHV
Trigger: AACGTGTCCCAGTTTAGACAACAAATTATACAGTGT...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp CTTTACCTCTGTTCCGTGTTTTGTAGCACCGTTGCCCTCCCCTCACTTCATCATCTTTTAAAAGGCTTATaGTATCAGTCCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LYLCSVFCSTVALPSLHHLLKGL*YQSRVW
Trigger: CCAAACTCTGGACTGATACAATAAGCCTTTTAAAAG...ATGATGAAGTGAGGGGAGGGCAACGGTGCTACAAAACACGGAACAGAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGTGGGATCATAAACTaGGCCCAAAGAGTAGGTATA +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGGIIN*AQRVGI
Trigger: TATACCTACTCTTTGGGCCAAGTTTATGATCCCACC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTGGACAGAAAGTGGATaGATGGAGATTTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLWTESG*MEISEE
Trigger: CTCCTCTGAAATCTCCATCAATCCACTTTCTGTCCA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGAGCTATCTTTTGTCTaGCCCCACCACCTAACCTGG +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVELSFV*PHHLTW
Trigger: CCAGGTTAGGTGGTGGGGCAAGACAAAAGATAGCTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGCCAAGTTGTAGATTaGTTCTTCGCTGAACTTCAT +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGQVVD*FFAELH
Trigger: ATGAAGTTCAGCGAAGAACAAATCTACAACTTGGCC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282641.6
ENST00000395489.6
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCCCCGGATTTGTGATTaGATTCCATTGAGAGTGATT +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLPRICD*IPLRVI
Trigger: AATCACTCTCAATGGAATCAAATCACAAATCCGGGG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGAACCATCCAGCACCTaGCCATTTAAAGCTTTCATA +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLEPSST*PFKAFI
Trigger: TATGAAAGCTTTAAATGGCAAGGTGCTGGATGGTTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGGTAGACCTCATAGGTaGTATATGCTGCTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLGRPHR*YMLLSL
Trigger: AAGACTTAGCAGCATATACAACCTATGAGGTCTACC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAGATACCCAATCCCATaGCTGATCAATTTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLRYPIP*LINFLL
Trigger: TAGGAGGAAATTGATCAGCAATGGGATTGGGTATCT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGCAAGGGAATTAGTGTaGGAGCAAATTTGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLARELV*EQICEA
Trigger: TGCTTCACAAATTTGCTCCAACACTAATTCCCTTGC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGCAAAGCCTCGGTTTTaGGTTTTATCTGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVAKPRF*VLSAAL
Trigger: AAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTGC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCTCCACAGCACCTGGTTaGATATTGTTGAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLSTAPG*ILLNSF
Trigger: AAAGGAATTCAACAATATCAAACCAGGTGCTGTGGA...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGAGCTCCAAGGTAGGTaGTGGTGGGATCATAAACTT +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVELQGR*WWDHKL
Trigger: AAGTTTATGATCCCACCACAACCTACCTTGGAGCTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAGTCACTGCAAAAGTaGGGTAGACCTCATAGGTTG +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQSLQK*GRPHRL
Trigger: CAACCTATGAGGTCTACCCAACTTTTGCAGTGACTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCAGACACTGTATAATTaGTTGTCTAAACTGGGACAC +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLQTLYN*LSKLGH
Trigger: GTGTCCCAGTTTAGACAACAAATTATACAGTGTCTG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCAAGCTGTTATCTGCTTaGGAGAAGACAAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLKLLSA*EKTKPI
Trigger: AATTGGCTTTGTCTTCTCCAAAGCAGATAACAGCTT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCATAATAATGACTAGCTaGCTCTGCCATATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLIIMTS*LCHMKA
Trigger: TGCCTTCATATGGCAGAGCAAGCTAGTCATTATTAT...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGTATCAGTCCAGAGTTaGGCAATAATAGTGGAAACT +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLVSVQS*AIIVET
Trigger: AGTTTCCACTATTATTGCCAAACTCTGGACTGATAC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCCGGAAAAGGTTTCCTaGATTATGGCGAATTCAACG +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVPEKVS*IMANST
Trigger: CGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAACAAATAATCGGCAGTaGTCCACACTGGCACAAACC +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVETNNRQ*STLAQT
Trigger: GGTTTGTGCCAGTGTGGACAACTGCCGATTATTTGT...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGCAAAGCCTCGGTTTTaGGTTTTATCTGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEAKPRF*VLSAAL
Trigger: AAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTGC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGAGCTCCAAGGTAGGTaGTGGTGGGATCATAAACTT +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEELQGR*WWDHKL
Trigger: AAGTTTATGATCCCACCACAACCTACCTTGGAGCTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACAGTCACTGCAAAAGTaGGGTAGACCTCATAGGTTG +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEQSLQK*GRPHRL
Trigger: CAACCTATGAGGTCTACCCAACTTTTGCAGTGACTG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCGACTTTTCAGTCAATTaGCTGAAAGGAAGAAGTATC +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLDFSVN*LKGRSI
Trigger: GATACTTCTTCCTTTCAGCAAATTGACTGAAAAGTC...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTGGCATGATACCAGATaGGAGGATATCCTAGTCATC +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVWHDTR*EDILVI
Trigger: GATGACTAGGATATCCTCCAATCTGGTATCATGCCA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TTAGCTTTCCTACAAAACCAAGGAGAACTGGGGGCACATAAAGTTTGCAATCTCCTTTTAAAAGGCTTATaGTATCAGTCCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LAFLQNQGELGAHKVCNLLLKGL*YQSRVW
Trigger: CCAAACTCTGGACTGATACAATAAGCCTTTTAAAAG...GAGATTGCAAACTTTATGTGCCCCCAGTTCTCCTTGGTTTTGTAGGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCGGAAAAGGTTTCCTaGATTATGGCGAATTCAACG +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPEKVS*IMANST
Trigger: CGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282641.6
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGAACCATCCAGCACCTaGCCATTTAAAGCTTTCATA +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVEPSST*PFKAFI
Trigger: TATGAAAGCTTTAAATGGCAAGGTGCTGGATGGTTC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGGTAGACCTCATAGGTaGTATATGCTGCTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVGRPHR*YMLLSL
Trigger: AAGACTTAGCAGCATATACAACCTATGAGGTCTACC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTTACTTGGCTTCCCTaGATTATTACTGACTGCCCA +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVFTWLP*IITDCP
Trigger: TGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGTTTCAGCTGTAGCCTaGGAGGCTTTGTTATCTCAT +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEVSAVA*EALLSH
Trigger: ATGAGATAACAAAGCCTCCAAGGCTACAGCTGAAAC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGGCATGATACCAGATaGGAGGATATCCTAGTCATC +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEWHDTR*EDILVI
Trigger: GATGACTAGGATATCCTCCAATCTGGTATCATGCCA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACCCCGGATTTGTGATTaGATTCCATTGAGAGTGATT +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEPRICD*IPLRVI
Trigger: AATCACTCTCAATGGAATCAAATCACAAATCCGGGG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGAACCATCCAGCACCTaGCCATTTAAAGCTTTCATA +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEEPSST*PFKAFI
Trigger: TATGAAAGCTTTAAATGGCAAGGTGCTGGATGGTTC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATTTACTTGGCTTCCCTaGATTATTACTGACTGCCCA +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEFTWLP*IITDCP
Trigger: TGGGCAGTCAGTAATAATCAAGGGAAGCCAAGTAAA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTTTCCTCTTTGTGACTTaGTGTATCACAAAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVFLFVT*CITKAA
Trigger: AGCTGCTTTTGTGATACACAAAGTCACAAAGAGGAA...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCAGACACTGTATAATTaGTTGTCTAAACTGGGACAC +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVQTLYN*LSKLGH
Trigger: GTGTCCCAGTTTAGACAACAAATTATACAGTGTCTG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAGCTGTTATCTGCTTaGGAGAAGACAAAGCCAATT +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKLLSA*EKTKPI
Trigger: AATTGGCTTTGTCTTCTCCAAAGCAGATAACAGCTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATAATAATGACTAGCTaGCTCTGCCATATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVIIMTS*LCHMKA
Trigger: TGCCTTCATATGGCAGAGCAAGCTAGTCATTATTAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGTATCAGTCCAGAGTTaGGCAATAATAGTGGAAACT +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVVSVQS*AIIVET
Trigger: AGTTTCCACTATTATTGCCAAACTCTGGACTGATAC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTCTTTTCCAGCAAAGTTaGCAAAATGATGGACTGCAA +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVLFQQS*QNDGLQ
Trigger: TTGCAGTCCATCATTTTGCAAACTTTGCTGGAAAAG...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTGCATATCCTCTATTGTaGCCATTAAAATCCATCATC +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVAYPLL*PLKSII
Trigger: GATGATGGATTTTAATGGCAACAATAGAGGATATGC...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATCCACAGCACCTGGTTaGATATTGTTGAATTCCTTT +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVESTAPG*ILLNSF
Trigger: AAAGGAATTCAACAATATCAAACCAGGTGCTGTGGA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTACCCCGAATATTAACTaGATTGCCCTTTATTCTACA +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVTPNIN*IALYST
Trigger: TGTAGAATAAAGGGCAATCAAGTTAATATTCGGGGT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTAAAAATGTTGGACATTaGGAGGGCAATAGAGTATTC +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVKNVGH*EGNRVF
Trigger: GAATACTCTATTGCCCTCCAAATGTCCAACATTTTT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTATGGCTTTAAAAATGTaGGACATTTGGAGGGCAATA +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVMALKM*DIWRAI
Trigger: TATTGCCCTCCAAATGTCCAACATTTTTAAAGCCAT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp GGATATCCTAGTCATCTAGGAGAATTATATTTTGTTGCAGTTGAAGGTGCTGTTACACTGTATAATTTGTaGTCTAAACTGGGACACGTT +
Preference number: 5 (lower is better)
Translates to: GYPSHLGELYFVAVEGAVTLYNL*SKLGHV
Trigger: AACGTGTCCCAGTTTAGACAACAAATTATACAGTGT...AACAGCACCTTCAACTGCAACAAAATATAATTCTCCTAGATGACTAGGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGTATCAGTCCAGAGTTaGGCAATAATAGTGGAAACT +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEVSVQS*AIIVET
Trigger: AGTTTCCACTATTATTGCCAAACTCTGGACTGATAC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAAGTCTTTGTCTCTTTTTaGGTACCTCAGCTAACTAAC +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVEVFVSF*VPQLTN
Trigger: GTTAGTTAGCTGAGGTACCAAAAAAGAGACAAAGAC...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAATGCTTGATTGCATTCTaGGCTTCCACTTTATTTGAA +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVECLIAF*ASTLFE
Trigger: TTCAAATAAAGTGGAAGCCAAGAATGCAATCAAGCA...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS-3UTR CAA 90 bp TCACCTTTTAAAAGGCTTATTGTATCAGTCCAGAGTTTGGCAATAATAGTGGAACTTTTAAAAGGCTTATaGTATCAGTCCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: SPFKRLIVSVQSLAIIVELLKGL*YQSRVW
Trigger: CCAAACTCTGGACTGATACAATAAGCCTTTTAAAAG...TTCCACTATTATTGCCAAACTCTGGACTGATACAATAAGCCTTTTAAAAGGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 72 bp GCTATATCCTGTGCGCTGGACCAGTGCGCGGAGGGCTaGTTCCTTCTGAGTGCCGCTCAATCCATCCCCGGA +
Preference number: 6 (lower is better)
Translates to: AISCALDQCAEG*FLLSAAQSIPG
Trigger: TCCGGGGATGGATTGAGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTGGTCCAGCGCACAGGATATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
CDS GCA 72 bp GTGCCATCGCCTCCATCAGTGGGGATGCCCAGGGTCTaGAGGGTGTATTCGGCTGCATACGTCTTTGCTTCA +
Preference number: 6 (lower is better)
Translates to: VPSPPSVGMPRV*RVYSAAYVFAS
Trigger: TGAAGCAAAGACGTATGCAGCCGAATACACCCTGCAGACCCTGGGCATCCCCACTGATGGAGGCGATGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 72 bp GCTGGACCAGTGCGCGGAGGGCTGCTTCCTTCTGAGTaGCGCTCAATCCATCCCCGGATTTGTGATTTGATT +
Preference number: 6 (lower is better)
Translates to: AGPVRGGLLPSE*RSIHPRICDLI
Trigger: AATCAAATCACAAATCCGGGGATGGATTGAGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
CDS GCA 72 bp AGTGGGGATGCCCAGGGTCTGCAGGGTGTATTCGGCTaGATACGTCTTTGCTTCATCCACAAAGGCACTCAG +
Preference number: 6 (lower is better)
Translates to: SGDAQGLQGVFG*IRLCFIHKGTQ
Trigger: CTGAGTGCCTTTGTGGATGAAGCAAAGACGTATGCAGCCGAATACACCCTGCAGACCCTGGGCATCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 72 bp GTCTTGTCCAAGGGTTACCGCTTGCTTGAGCTGGGCTaGAGACACGGGTGCAGTTGCATTAGGGACAGCATA +
Preference number: 6 (lower is better)
Translates to: VLSKGYRLLELG*RHGCSCIRDSI
Trigger: TATGCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGACAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CCA 72 bp GCTAAGTCTTGTCCAAGGGTTACCGCTTGCTTGAGCTaGGCTGCAGACACGGGTGCAGTTGCATTAGGGACA +
Preference number: 6 (lower is better)
Translates to: AKSCPRVTACLS*AADTGAVALGT
Trigger: TGTCCCTAATGCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGACAAGACTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 72 bp GTATATGCTGCTAAGTCTTGTCCAAGGGTTACCGCTTaGTTGAGCTGGGCTGCAGACACGGGTGCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: VYAAKSCPRVTA*LSWAADTGAVA
Trigger: TGCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAAGCGGTAACCCTTGGACAAGACTTAGCAGCATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS GCA 72 bp TTGCTGTGCTCATGCTCGCTTCTGGCTCTGGGCATGTaGCCAGACACACTGCTTCCATCTATAGGAACCTCT +
Preference number: 6 (lower is better)
Translates to: LLCSCSLLALGM*PDTLLPSIGTS
Trigger: AGAGGTTCCTATAGATGGAAGCAGTGTGTCTGGGCACATGCCCAGAGCCAGAAGCGAGCATGAGCACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373995.7
ENST00000395489.6
ENST00000395495.5
CDS CCA 72 bp AGACACGGGTGCAGTTGCATTAGGGACAGCATATCCTaGGAAAGCAGTAGCAGCAGCAGCAGCAGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: RHGCSCIRDSIS*ESSSSSSSSSH
Trigger: ATGGCTACTGCTGCTGCTGCTGCTACTGCTTTCCCAGGATATGCTGTCCCTAATGCAACTGCACCCGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CAA 72 bp ATCATAAACTTGGCCCAAAGAGTAGGTATACTCTCCTaGCAGCATGGTGCCCCTTCCACCTGTGCCTCGGGT +
Preference number: 6 (lower is better)
Translates to: IINLAQRVGILS*QHGAPSTCASG
Trigger: ACCCGAGGCACAGGTGGAAGGGGCACCATGCTGCAAGGAGAGTATACCTACTCTTTGGGCCAAGTTTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS CAA 90 bp TGTGGTGGGATCATAAACTTGGCCCAAAGAGTAGGTATACTCTCCTaGCAGCATGGTGCCCCTTCCACCTGTGCCTCGGGTATACCTAAC +
Preference number: 6 (lower is better)
Translates to: CGGIINLAQRVGILS*QHGAPSTCASGIPN
Trigger: GTTAGGTATACCCGAGGCACAGGTGGAAGGGGCACCATGCTGCAAGGAGAGTATACCTACTCTTTGGGCCAAGTTTATGATCCCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS CAA 90 bp ATAGAAGACAGGAGCTCCAAGGTAGGTTGTGGTGGGATCATAAACTaGGCCCAAAGAGTAGGTATACTCTCCTTGCAGCATGGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: IEDRSSKVGCGGIIN*AQRVGILSLQHGAP
Trigger: AGGGGCACCATGCTGCAAGGAGAGTATACCTACTCTTTGGGCCAAGTTTATGATCCCACCACAACCTACCTTGGAGCTCCTGTCTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS GCA 72 bp TCAGAAGGTGCCATATCCATCCCCTCGGGCAGTCACTaGAAAAGTTGGGTAGACCTCATAGGTTGTATATGC +
Preference number: 6 (lower is better)
Translates to: SEGAISIPSGSH*KSWVDLIGCIC
Trigger: GCATATACAACCTATGAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGGGATGGATATGGCACCTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CCA 72 bp GGCAAAGCCTCGGTTTTTGGTTTTATCTGCAGCGCTTaGGTAGACGATGACATCGACAACACCTTCAGTAAC +
Preference number: 6 (lower is better)
Translates to: GKASVFGFICSA*VDDDIDNTFSN
Trigger: GTTACTGAAGGTGTTGTCGATGTCATCGTCTACCCAAGCGCTGCAGATAAAACCAAAAACCGAGGCTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
ENST00000473480.5
CDS CCA 72 bp GGGCATAGAAGACAGGAGCTCCAAGGTAGGTTGTGGTaGGATCATAAACTTGGCCCAAAGAGTAGGTATACT +
Preference number: 6 (lower is better)
Translates to: GHRRQELQGRLW*DHKLGPKSRYT
Trigger: AGTATACCTACTCTTTGGGCCAAGTTTATGATCCCACCACAACCTACCTTGGAGCTCCTGTCTTCTATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS CCA 72 bp GATAATGGCTCTGTTGCTGAGATGTCCTTTGGTGGCTaGGAAATGAAGACTGGGAATTGCTGCATAGGTCTG +
Preference number: 6 (lower is better)
Translates to: DNGSVAEMSFGG*EMKTGNCCIGL
Trigger: CAGACCTATGCAGCAATTCCCAGTCTTCATTTCCCAGCCACCAAAGGACATCTCAGCAACAGAGCCATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS CAA 72 bp AGGAGCTCCAAGGTAGGTTGTGGTGGGATCATAAACTaGGCCCAAAGAGTAGGTATACTCTCCTTGCAGCAT +
Preference number: 6 (lower is better)
Translates to: RSSKVGCGGIIN*AQRVGILSLQH
Trigger: ATGCTGCAAGGAGAGTATACCTACTCTTTGGGCCAAGTTTATGATCCCACCACAACCTACCTTGGAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS CAA 72 bp GGGCAGTCACTGCAAAAGTTGGGTAGACCTCATAGGTaGTATATGCTGCTAAGTCTTGTCCAAGGGTTACCG +
Preference number: 6 (lower is better)
Translates to: GQSLQKLGRPHR*YMLLSLVQGLP
Trigger: CGGTAACCCTTGGACAAGACTTAGCAGCATATACAACCTATGAGGTCTACCCAACTTTTGCAGTGACTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CAA 72 bp TGCCATATCCATCCCCTCGGGCAGTCACTGCAAAAGTaGGGTAGACCTCATAGGTTGTATATGCTGCTAAGT +
Preference number: 6 (lower is better)
Translates to: CHIHPLGQSLQK*GRPHRLYMLLS
Trigger: ACTTAGCAGCATATACAACCTATGAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGGGATGGATATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CAA 90 bp TTCAGAAGGTGCCATATCCATCCCCTCGGGCAGTCACTGCAAAAGTaGGGTAGACCTCATAGGTTGTATATGCTGCTAAGTCTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: FRRCHIHPLGQSLQK*GRPHRLYMLLSLVQ
Trigger: TTGGACAAGACTTAGCAGCATATACAACCTATGAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGGGATGGATATGGCACCTTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CAA 90 bp GGGTGGATTGCAGGATTCTGGCTGGCTAGAGCAGGAATAGTTATTTaGTACAAGAATAGCTGTCTTTGGTCTTGTCCAATAGCAGAGTGC +
Preference number: 6 (lower is better)
Translates to: GWIAGFWLARAGIVI*YKNSCLWSCPIAEC
Trigger: GCACTCTGCTATTGGACAAGACCAAAGACAGCTATTCTTGTACAAAATAACTATTCCTGCTCTAGCCAGCCAGAATCCTGCAATCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CAA 90 bp TGCTCACTGAGTAATTTCAGAGATCCCCACCCGGAAAAGGTTTCCTaGATTATGGCGAATTCAACGTGTCACTCGGGTTATGCTCTAATC +
Preference number: 6 (lower is better)
Translates to: CSLSNFRDPHPEKVS*IMANSTCHSGYALI
Trigger: GATTAGAGCATAACCCGAGTGACACGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGGGTGGGGATCTCTGAAATTACTCAGTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373995.7
ENST00000374001.6
CDS CAA 90 bp AGCAAAGTTTGCAAAATGATGGACTGCAAAGCATTATTTCCTTTTTaGAGGCCAGGAATTGCTGTGCTCATGCTCGCTTCTGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SKVCKMMDCKALFPF*RPGIAVLMLASGSG
Trigger: CCCAGAGCCAGAAGCGAGCATGAGCACAGCAATTCCTGGCCTCAAAAAAGGAAATAATGCTTTGCAGTCCATCATTTTGCAAACTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373995.7
ENST00000395489.6
ENST00000395495.5
CDS TCA 72 bp GTAATTTCAGAGATCCCCACCCGGAAAAGGTTTCCTTaGTTATGGCGAATTCAACGTGTCACTCGGGTTATG +
Preference number: 6 (lower is better)
Translates to: VISEIPTRKRFP*LWRIQRVTRVM
Trigger: CATAACCCGAGTGACACGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGGGTGGGGATCTCTGAAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373995.7
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
ENST00000473480.5
CDS GCA 72 bp AAGAATAGCTGTCTTTGGTCTTGTCCAATAGCAGAGTaGAGCTGGTACACTGGCTGTCCCCAGTTATTTTTC +
Preference number: 6 (lower is better)
Translates to: KNSCLWSCPIAE*SWYTGCPQLFF
Trigger: GAAAAATAACTGGGGACAGCCAGTGTACCAGCTGCACTCTGCTATTGGACAAGACCAAAGACAGCTATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000493415.5
CDS CCA 72 bp AGCTTTGGAGGTGTGAAAGGGTGGATTGCAGGATTCTaGCTGGCTAGAGCAGGAATAGTTATTTTGTACAAG +
Preference number: 6 (lower is better)
Translates to: SFGGVKGWIAGF*LARAGIVILYK
Trigger: CTTGTACAAAATAACTATTCCTGCTCTAGCCAGCCAGAATCCTGCAATCCACCCTTTCACACCTCCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
CDS CAA 72 bp AGTAATTTCAGAGATCCCCACCCGGAAAAGGTTTCCTaGATTATGGCGAATTCAACGTGTCACTCGGGTTAT +
Preference number: 6 (lower is better)
Translates to: SNFRDPHPEKVS*IMANSTCHSGY
Trigger: ATAACCCGAGTGACACGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGGGTGGGGATCTCTGAAATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373995.7
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
ENST00000473480.5
CDS CAA 90 bp TGTTATCTGAGTAATTTCAGAGATCCCCACCCGGAAAAGGTTTCCTaGATTATGGCGAATTCAACGTGTCACTCGGGTTATGCTCTAATC +
Preference number: 6 (lower is better)
Translates to: CYLSNFRDPHPEKVS*IMANSTCHSGYALI
Trigger: GATTAGAGCATAACCCGAGTGACACGTTGAATTCGCCATAATCAAGGAAACCTTTTCCGGGTGGGGATCTCTGAAATTACTCAGATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282641.6
ENST00000395489.6
ENST00000395495.5
ENST00000414883.1
ENST00000473480.5
CDS CAA 72 bp GCAGGATTCTGGCTGGCTAGAGCAGGAATAGTTATTTaGTACAAGAATAGCTGTCTTTGGTCTTGTCCAATA +
Preference number: 6 (lower is better)
Translates to: AGFWLARAGIVI*YKNSCLWSCPI
Trigger: TATTGGACAAGACCAAAGACAGCTATTCTTGTACAAAATAACTATTCCTGCTCTAGCCAGCCAGAATCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000282641.6
ENST00000373993.5
ENST00000373995.7
ENST00000373997.8
ENST00000374001.6
ENST00000395489.6
ENST00000395495.5