RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZZZ3 (Homo sapiens)

Ensembl gene IDs: ENSG00000036549

Ensembl transcript IDs: ENST00000370798.5, ENST00000370801.8, ENST00000414381.5, ENST00000433749.5, ENST00000463166.5, ENST00000469944.1, ENST00000474746.1, ENST00000476195.5, ENST00000476275.5, ENST00000481346.5

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCACAACGGTaGAGAGCTGTACTTGACGAGAACACTCAGGAAGCTCTCATGCTG +
Preference number: 1 (lower is better)
Translates to: TRNVQLLNSDLEPQR*RAVLDENTQEALML
Trigger: CAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTACAGCTCTGCACCGTTGTGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR GCA 90 bp AACGGTGCAGAGCTGTACTTGACGAGAACACTCAGGAAGCTCTCATaGTGTGAGTGTCATTTCTGGGAAAGCAGAGAATCTTTCCAAACT +
Preference number: 1 (lower is better)
Translates to: NGAELYLTRTLRKLS*CECHFWESRESFQT
Trigger: AGTTTGGAAAGATTCTCTGCTTTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTACAGCTCTGCACCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR TCA 90 bp TCGTTCCATCTCACCCATTTAAGATCACCACCTAAAACGCAGTGGTaGAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTCAGC +
Preference number: 1 (lower is better)
Translates to: SFHLTHLRSPPKTQW*KIHQGNLCSPGMFS
Trigger: GCTGAACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAGGTGGTGATCTTAAATGGGTGAGATGGAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR TCA 90 bp CAGAATGCTAATGATTCCCCTCTTCACCCACTAATAATTCCAGGGTaGGAAGTTAAGCTCAAGTCCATTTACTTTCCTTCTGTTATGATA +
Preference number: 1 (lower is better)
Translates to: QNANDSPLHPLIIPG*EVKLKSIYFPSVMI
Trigger: TATCATAACAGAAGGAAAGTAAATGGACTTGAGCTTAACTTCTCACCCTGGAATTATTAGTGGGTGAAGAGGGGAATCATTAGCATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR CAA 90 bp CCAAGGCAGGAAACACAAGCCTTAGTCCCAGCTTTGCCTGAGACTTaGCAAGCCTGGACATATGCTCAGGTTTGTACTCTTAGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: PRQETQALVPALPET*QAWTYAQVCTLRKH
Trigger: GTGCTTCCTAAGAGTACAAACCTGAGCATATGTCCAGGCTTGCAAAGTCTCAGGCAAAGCTGGGACTAAGGCTTGTGTTTCCTGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTCTAGAGCCACAACGGTaGAGAGCTGTACTTGACGAG +
Preference number: 2 (lower is better)
Translates to: LKRSGEKFTRETFAHQECLEPQR*RAVLDE
Trigger: CTCGTCAAGTACAGCTCTGCACCGTTGTGGCTCTAG...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR-3UTR GCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTCTAGAGCCACAACGGTaGAGAGCTGTACTTGACGAG +
Preference number: 2 (lower is better)
Translates to: YSPIILCRQMVAYRQMTALEPQR*RAVLDE
Trigger: CTCGTCAAGTACAGCTCTGCACCGTTGTGGCTCTAG...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR CCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTGGCCTTTTAAAGCCATaGGGGCTGTTTCCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: YSPIILCRQMVAYRQMTAGLLKP*GLFPWS
Trigger: GCTCCAAGGAAACAGCCCCCATGGCTTTAAAAGGCC...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR TCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAACCATTGCTATGTGTTaGAGAGGACTAGTAAATGAT +
Preference number: 2 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPTIAMC*RGLVND
Trigger: ATCATTTACTAGTCCTCTTCAACACATAGCAATGGT...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR-3UTR TCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCCCACCACTGGGACAGTaGGTTCTTTTAAAGTGTATA +
Preference number: 2 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTPPLGQ*VLLKCI
Trigger: TATACACTTTAAAAGAACTCACTGTCCCAGTGGTGG...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR GCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTCACCAGGGAAACCTTTaGTCACCAGGAATGTTCAGC +
Preference number: 2 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCHQGNL*SPGMFS
Trigger: GCTGAACATTCCTGGTGAGCAAAGGTTTCCCTGGTG...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR TCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTGCCTAATTACAAGTTaGAGGCAGATCTTCTGGCAT +
Preference number: 2 (lower is better)
Translates to: YSPIILCRQMVAYRQMTACLITS*RQIFWH
Trigger: ATGCCAGAAGATCTGCCTTCAACTTGTAATTAGGCA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR TCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCTCTACTGAATACCACTaGATAAGCAATGCTTTAGCA +
Preference number: 2 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTSTEYH*ISNALA
Trigger: TGCTAAAGCATTGCTTATTCAGTGGTATTCAGTAGA...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAATCTCTCTTTAATGTGTaGTCTCGTTCCATCTCACCC +
Preference number: 2 (lower is better)
Translates to: PSMTTTGTVSSFKVYILESLFNV*SRSISP
Trigger: GGGTGAGATGGAACGAGAGCACACATTAAAGAGAGA...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR-3UTR TCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTTCTCACAGTTCTCCTaGCAAATGAACATCATTCAA +
Preference number: 2 (lower is better)
Translates to: YSPIILCRQMVAYRQMTAFSQFS*QMNIIQ
Trigger: TTGAATGATGTTCATTTGTCAGGAGAACTGTGAGAA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR GCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTAACCCTTGCTCACTGTaGAGACTAAATTTAATCACT +
Preference number: 2 (lower is better)
Translates to: YSPIILCRQMVAYRQMTANPCSL*RLNLIT
Trigger: AGTGATTAAATTTAGTCTGCACAGTGAGCAAGGGTT...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR TCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGACCATTGCTATGTGTTaGAGAGGACTAGTAAATGAT +
Preference number: 2 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLTIAMC*RGLVND
Trigger: ATCATTTACTAGTCCTCTTCAACACATAGCAATGGT...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR GCA 72 bp GTTCAGCTGCTGAACAGTGATCTAGAGCCACAACGGTaGAGAGCTGTACTTGACGAGAACACTCAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: VQLLNSDLEPQR*RAVLDENTQEA
Trigger: AGCTTCCTGAGTGTTCTCGTCAAGTACAGCTCTGCACCGTTGTGGCTCTAGATCACTGTTCAGCAGCTGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR TCA 72 bp ATCTGCACACCTCCACTCCTAACACCTAGTGTTGCCTaGCACAAGGGGAAATTCCTGCTCAGGAAACAGGAT +
Preference number: 3 (lower is better)
Translates to: ICTPPLLTPSVA*HKGKFLLRKQD
Trigger: ATCCTGTTTCCTGAGCAGGAATTTCCCCTTGTGTCAGGCAACACTAGGTGTTAGGAGTGGAGGTGTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR CAA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCGGTGCAGAGCTGTACTaGACGAGAACACTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTGAELY*TRTLRK
Trigger: CTTCCTGAGTGTTCTCGTCAAGTACAGCTCTGCACC...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGGTGCAGAGCTGTACTaGACGAGAACACTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEGAELY*TRTLRK
Trigger: CTTCCTGAGTGTTCTCGTCAAGTACAGCTCTGCACC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR-3UTR CAA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCATTAACAATGATACCATaGCTATGTGTTGAAGAGGAC +
Preference number: 3 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPLTMIP*LCVEED
Trigger: GTCCTCTTCAACACATAGCAATGGTATCATTGTTAA...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR GCA 72 bp AGGCATACTATTAGGTTAAGTGAGAAGCACCCAACATaGATAGAAGAAAATCCTACCCAAGGCAGGAAACAC +
Preference number: 3 (lower is better)
Translates to: RHTIRLSEKHPT*IEENPTQGRKH
Trigger: GTGTTTCCTGCCTTGGGTAGGATTTTCTTCTATGCATGTTGGGTGCTTCTCACTTAACCTAATAGTATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATTAACAATGATACCATaGCTATGTGTTGAAGAGGAC +
Preference number: 3 (lower is better)
Translates to: YLTRTLRKLSCCECHFWELTMIP*LCVEED
Trigger: GTCCTCTTCAACACATAGCAATGGTATCATTGTTAA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTCACCAGGGAAACCTTaGCTCACCAGGAATGTTCAG +
Preference number: 3 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLSPGKP*LTRNVQ
Trigger: CTGAACATTCCTGGTGAGCAAAGGTTTCCCTGGTGA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
3UTR-3UTR CAA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTATTAGGCAGTTTTCTTaGATGAGTTGTACTGACAAC +
Preference number: 3 (lower is better)
Translates to: YSPIILCRQMVAYRQMTAIRQFS*MSCTDN
Trigger: GTTGTCAGTACAACTCATCAAAGAAAACTGCCTAAT...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR TCA 72 bp AATGATTCCCCTCTTCACCCACTAATAATTCCAGGGTaGGAAGTTAAGCTCAAGTCCATTTACTTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: NDSPLHPLIIPG*EVKLKSIYFPS
Trigger: AGAAGGAAAGTAAATGGACTTGAGCTTAACTTCTCACCCTGGAATTATTAGTGGGTGAAGAGGGGAATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAACGCAACGGGCCACTTaGGGAGGCGCCGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWETQRAT*GGAAAV
Trigger: CACGGCGGCGGCGCCTCCCCAAGTGGCCCGTTGCGT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370798.5
CDS-3UTR GCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCATCGGGTGGCCACCGCTaGAGGAAGCTCGATAGCGGC +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPSGGHR*RKLDSG
Trigger: GCCGCTATCGAGCTTCCTGCAGCGGTGGCCACCCGA...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370798.5
CDS-3UTR TCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCACTGAGGACGACTGCTTaGGCCTTCTGGACCATCACT +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPLRTTA*AFWTIT
Trigger: AGTGATGGTCCAGAAGGCTCAAGCAGTCGTCCTCAG...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGCCCCGCCACGGCACTTaGTCGGGTGGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLPRHGT*SGGHRC
Trigger: GCAGCGGTGGCCACCCGAGCAAGTGCCGTGGCGGGG...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370798.5
CDS-3UTR CCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCATGCCACCGAACACCCTaGATGGGTTCTATGCCACAG +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPCHRTP*MGSMPQ
Trigger: CTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCA...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCATCTGGAGGACAATCCTaGCAATGCCACCGAACACCC +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPSGGQS*QCHRTP
Trigger: GGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGA...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCCTGAGGACGACTGCTTaGGCCTTCTGGACCATCACT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFLRTTA*AFWTIT
Trigger: AGTGATGGTCCAGAAGGCTCAAGCAGTCGTCCTCAG...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCCCTAGGGCTTACCCATaGTTCTCGGGTACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFPRAYP*FSGTLL
Trigger: CAGCAGAGTACCCGAGAATCATGGGTAAGCCCTAGG...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCACTTGACCTGCACTTGTaGATCTGTGCAAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPLDLHL*ICARHL
Trigger: AAGGTGCCTTGCACAGATTCACAAGTGCAGGTCAAG...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCGGCTGCCCTTCGTGGTaGGGTTCTCAGAGTATAACG +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTGCPSW*GSQSIT
Trigger: CGTTATACTCTGAGAACCTCACCACGAAGGGCAGCC...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGCTGGCAACCTGTTTTaGTGTCCTGTTGCCCAATTC +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPAGNLF*CPVAQF
Trigger: GAATTGGGCAACAGGACAGCAAAACAGGTTGCCAGC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCCTAGAGCCACAACGGTaGAGAGCTGTACTTGACGAG +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFLEPQR*RAVLDE
Trigger: CTCGTCAAGTACAGCTCTGCACCGTTGTGGCTCTAG...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCTCTGGAGGACAATCCTaGCAATGCCACCGAACACCC +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTSGGQS*QCHRTP
Trigger: GGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGA...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAAGTGCTTCTCTCTGGTaGCTGCCTAAACTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPSASLW*LPKLSR
Trigger: CCTTGAAAGTTTAGGCAGGCACCAGAGAGAAGCACT...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCGCTGGCAACCTGTTTTaGTGTCCTGTTGCCCAATTC +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFAGNLF*CPVAQF
Trigger: GAATTGGGCAACAGGACAGCAAAACAGGTTGCCAGC...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTGGACAATCCTGGCAATaGCACCGAACACCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECGQSWQ*HRTPWM
Trigger: CATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCC...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCACTTCTGTACTCGGCTaGCAACCTGTTTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFTSVLG*QPVLLS
Trigger: GGACAGCAAAACAGGTTGCCAGCCGAGTACAGAAGT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGTTTGGTGTTCTGCCTaGTACTGGAATGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPVWCSA*YWNASF
Trigger: AAAGCTGGCATTCCAGTACCAGGCAGAACACCAAAC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAACAATACGGTCATCATaGTCCACTCATTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPTIRSS*STHWET
Trigger: GGTTTCCCAATGAGTGGATCATGATGACCGTATTGT...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCGGCTCAGTAGTCAGCTaGTTAACATGTTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTGSVVS*LTCSTG
Trigger: GCCTGTGGAACATGTTAATCAGCTGACTACTGAGCC...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCTTTACACTGCTCTTTTaGGGCACTGCTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFFTLLF*GTAISH
Trigger: GTGGGAGATAGCAGTGCCTCAAAAGAGCAGTGTAAA...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATTCAAGGTCTTGGACTaGTTGAGAACGCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEFKVLD*LRTLSL
Trigger: GAGGCTCAGCGTTCTCAAGCAGTCCAAGACCTTGAA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATCATCTGAGGACGACTaGTTGAGCCTTCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWESSEDD*LSLLDH
Trigger: ATGGTCCAGAAGGCTCAAGCAGTCGTCCTCAGATGA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGTTGCCCAATTCATCTaGTATCTTCTGCCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEVAQFI*YLLPAS
Trigger: CGACGCTGGCAGAAGATAGCAGATGAATTGGGCAAC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGGTAATTGTAACTGGTaGCCTGAGACACACAGTAGT +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPGNCNW*PETHSS
Trigger: ACTACTGTGTGTCTCAGGGCACCAGTTACAATTACC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAACACCAGGGAAACCTTTaGTCACCAGGAATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEHQGNL*SPGMFS
Trigger: GCTGAACATTCCTGGTGAGCAAAGGTTTCCCTGGTG...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCCACCAGGGAAACCTTTaGTCACCAGGAATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTHQGNL*SPGMFS
Trigger: GCTGAACATTCCTGGTGAGCAAAGGTTTCCCTGGTG...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCATTCAGTGCTTCTCTCTaGTGCCTGCCTAAACTTTCA +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPFSASL*CLPKLS
Trigger: TGAAAGTTTAGGCAGGCACCAGAGAGAAGCACTGAA...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAAAAGGGCCCTGTAGCTaGCTCAGTAGTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEKGPCS*LSSQLI
Trigger: AATCAGCTGACTACTGAGCCAGCTACAGGGCCCTTT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCAGGTTCTCCGGAGGCTaGCATACTCTCAAGACTTGT +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTRFSGG*HTLKTC
Trigger: ACAAGTCTTGAGAGTATGCCAGCCTCCGGAGAACCT...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAACGATCTCAGGCAATTaGACAACTCTCTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPTISGN*TTLCGY
Trigger: ATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGT...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTCACTGGCGGTTCATGTaGAGTCATGAAAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: YSPIILCRQMVAYRQMTAHWRFM*SHESGR
Trigger: CCTTCCACTTTCATGACTTCACATGAACCGCCAGTG...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGTGTTCATGTGGCTATaGAAACAAGATCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPVFMWL*KQDRSS
Trigger: TGATGACCGATCTTGTTTTCATAGCCACATGAACAC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTGTGGTCCTCCAACTTaGCCTGCACTTGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: YSPIILCRQMVAYRQMTACGPPT*PALVNL
Trigger: CAGATTCACAAGTGCAGGTCAAGTTGGAGGACCACA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGCAAATGTCCAATATTaGGTCTTGCCTCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEANVQY*VLPLRV
Trigger: CACCCTCAGAGGCAAGACTCAATATTGGACATTTGC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCCTTCTCTCTGGTGCCTaGCTAAACTTTCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFLLSGA*LNFQGL
Trigger: AAGACCTTGAAAGTTTAGGCAGGCACCAGAGAGAAG...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAAATGGGATTTTTCAGTaGTTCTCTCTGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWENGIFQ*FSLVPA
Trigger: GGCAGGCACCAGAGAGAAGCACTGAAAAATCCCATT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTGTTGCCCAATTCATCTaGTATCTTCTGCCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECVAQFI*YLLPAS
Trigger: CGACGCTGGCAGAAGATAGCAGATGAATTGGGCAAC...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGTTTTGCTGTCCTGTTaGCCAATTCATCTGCTATCT +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPVLLSC*PIHLLS
Trigger: AGATAGCAGATGAATTGGGCAACAGGACAGCAAAAC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGAGGGTGCTGTCGTCTaGTTGTTGAAGACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEEGAVV*LLKTFW
Trigger: CCAAAAAGTCTTCAACAAGCAGACGACAGCACCCTC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTGGACAATCCTGGCAATaGCACCGAACACCCTGGATG +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCGQSWQ*HRTPWM
Trigger: CATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCC...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCTCTCTCTTTAATGTGTaGTCTCGTTCCATCTCACCC +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFSLFNV*SRSISP
Trigger: GGGTGAGATGGAACGAGAGCACACATTAAAGAGAGA...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCCAAGGTAATTGTAACTaGTGCCCTGAGACACACAGT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFQGNCN*CPETHS
Trigger: ACTGTGTGTCTCAGGGCACCAGTTACAATTACCTTG...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCGAAGCAGCCATACTATaGCAAGTCCCTACAATACGG +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTEAAIL*QVPTIR
Trigger: CCGTATTGTAGGGACTTGCCATAGTATGGCTGCTTC...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCGAGACTTTGCAAGCCTaGACATATGCTCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFETLQA*TYAQVC
Trigger: ACAAACCTGAGCATATGTCCAGGCTTGCAAAGTCTC...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCACGATCTCAGGCAATTaGACAACTCTCTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFTISGN*TTLCGY
Trigger: ATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCAGGCAACATAGAATATaGAAGGGACTCTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFRQHRI*KGLSIL
Trigger: AAGGATGGAGAGTCCCTTTCATATTCTATGTTGCCT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCGTGTTCATGTGGCTATaGAAACAAGATCGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFVFMWL*KQDRSS
Trigger: TGATGACCGATCTTGTTTTCATAGCCACATGAACAC...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGCTCGTTTAGTCCCTTaGAAATCTGCATCATTGTCC +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEARLVP*KSASLS
Trigger: GGACAATGATGCAGATTTTCAAGGGACTAAACGAGC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGTGTTCCCATCAGGCTaGCAGTCATCACAGTTTATA +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEVFPSG*QSSQFI
Trigger: TATAAACTGTGATGACTGTCAGCCTGATGGGAACAC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATCCCTTAAAGATGACTaGGTTTCAGAAAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWESLKDD*VSEKGP
Trigger: AGGGCCCTTTTCTGAAACTCAGTCATCTTTAAGGGA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTCTTCTGTAATGTGCTaGCTGGCACTCTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: YSPIILCRQMVAYRQMTASSVMC*LALSLA
Trigger: TGCCAAAGAGAGTGCCAGTCAGCACATTACAGAAGA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCACTACCTACTACTATCTaGACTTCAGGGCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPLPTTI*TSGPFK
Trigger: TTTAAAAGGCCCTGAAGTTCAGATAGTAGTAGGTAG...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTAATGGGATTTTTCAGTaGTTCTCTCTGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECNGIFQ*FSLVPA
Trigger: GGCAGGCACCAGAGAGAAGCACTGAAAAATCCCATT...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATCATCTGCTATCTTCTaGCAGCGTCGAGATTCTACT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWESSAIF*QRRDST
Trigger: AGTAGAATCTCGACGCTGGCAGAAGATAGCAGATGA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCATAAGTTTGGTGTTCTaGCTGGTACTGGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTISLVF*LVLECQ
Trigger: CTGGCATTCCAGTACCAGGCAGAACACCAAACTTAT...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTGAGGGTGCTGTCGTCTaGTTGTTGAAGACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECEGAVV*LLKTFW
Trigger: CCAAAAAGTCTTCAACAAGCAGACGACAGCACCCTC...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCTGCTTATTAAGAGGGTaGTGTCGTCTGCTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFCLLRG*CRLLVE
Trigger: TTCAACAAGCAGACGACAGCACCCTCTTAATAAGCA...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATCTCTCTTTAATGTGTaGTCTCGTTCCATCTCACCC +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWESLFNV*SRSISP
Trigger: GGGTGAGATGGAACGAGAGCACACATTAAAGAGAGA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATTCTTGTAGAAAGAGTTaGAGGTCCCAGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDSCRKS*RSQAPG
Trigger: TCCGGGGGCCTGGGACCTGCAACTCTTTCTACAAGA...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCCTTCAGGATGCGCAATaGTACGATTCCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFLQDAQ*YDSLKF
Trigger: GAACTTTAAGGAATCGTAGCATTGCGCATCCTGAAG...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTAGGCTATGGGTATATTaGTCCCATACGATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECRLWVY*SHTISG
Trigger: GCCTGAGATCGTATGGGACCAATATACCCATAGCCT...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATTGCCACCGAACACCCTaGATGGGTTCTATGCCACAG +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDCHRTP*MGSMPQ
Trigger: CTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCA...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCATCCAAAGACATTTCTaGAGGACAATCCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFIQRHF*RTILAM
Trigger: CATTGCCAGGATTGTCCTCCAGAAATGTCTTTGGAT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTCACACACCATGAGCTaGTTAAGGAAGCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECSHTMS*LRKQCH
Trigger: GTGGCATTGCTTCCTTAACCAGCTCATGGTGTGTGA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGGCCTTTTAAAGCCATaGGGGCTGTTTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEGLLKP*GLFPWS
Trigger: GCTCCAAGGAAACAGCCCCCATGGCTTTAAAAGGCC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGTTTTGCCTAGTATTTaGTCCCCATGCGTCTGTATT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEVLPSI*SPCVCI
Trigger: AATACAGACGCATGGGGATCAAATACTAGGCAAAAC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTCTCAGCTTCAGCCATaGAGAATACTAGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECSQLQP*RILEPP
Trigger: AGGAGGTTCTAGTATTCTTCATGGCTGAAGCTGAGA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAAAGGAGTTGGAGCTATaGTCTAGAATGGAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEKELEL*SRMELK
Trigger: CTTAAGCTCCATTCTAGATCATAGCTCCAACTCCTT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAACACTGGCGGTTCATGTaGAGTCATGAAAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEHWRFM*SHESGR
Trigger: CCTTCCACTTTCATGACTTCACATGAACCGCCAGTG...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAATAAAAGAATGCATGTaGACCCTTGCTCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEIKECM*TLAHCA
Trigger: TGCACAGTGAGCAAGGGTTCACATGCATTCTTTTAT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTACACCTAGTGTTGCCTaGCACAAGGGGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCTPSVA*HKGKFL
Trigger: CAGGAATTTCCCCTTGTGTCAGGCAACACTAGGTGT...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTTCATCTGAGGACGACTaGTTGAGCCTTCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCSSEDD*LSLLDH
Trigger: ATGGTCCAGAAGGCTCAAGCAGTCGTCCTCAGATGA...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCGAGATTTCTTCAGGATaGGCAATGCTACGATTCCTT +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTEISSG*AMLRFL
Trigger: AAGGAATCGTAGCATTGCGCATCCTGAAGAAATCTC...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCAGTCCCTTGAAAATCTaGATCATTGTCCACTACTGT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFSPLKI*IIVHYC
Trigger: ACAGTAGTGGACAATGATGCAGATTTTCAAGGGACT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTGCACTTGTGAATCTGTaGAAGGCACCTTATGGTCTA +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECALVNL*KAPYGL
Trigger: TAGACCATAAGGTGCCTTGCACAGATTCACAAGTGC...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAAACAAACACATCTTCTaGTCAAGCCGAAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPNKHIF*SSRKIF
Trigger: GAAGATTTTTCGGCTTGAGCAGAAGATGTGTTTGTT...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTTCAGTGCTTCTCTCTaGTGCCTGCCTAAACTTTCA +
Preference number: 4 (lower is better)
Translates to: YSPIILCRQMVAYRQMTAFSASL*CLPKLS
Trigger: TGAAAGTTTAGGCAGGCACCAGAGAGAAGCACTGAA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAAACTCTCTGTGGATATaGAAGCCCAATATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWENSLWI*KPNISL
Trigger: AAGGCTGATATTGGGCTTCCATATCCACAGAGAGTT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCTTGAACAACTCTCTGTaGATATGGAAGCCCAATATC +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFLNNSL*IWKPNI
Trigger: GATATTGGGCTTCCATATCCACAGAGAGTTGTTCAA...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAATCCAAAGACATTTCTaGAGGACAATCCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEIQRHF*RTILAM
Trigger: CATTGCCAGGATTGTCCTCCAGAAATGTCTTTGGAT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCATGTCATCTGTTTGCTaGAAAGTAGTTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFMSSVC*KVVWVK
Trigger: CTTGACCCAAACTACTTTCCAGCAAACAGATGACAT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCTACTGCAGAATTAAGTaGCCCTTCCTCACTGACATT +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTYCRIK*PFLTDI
Trigger: AATGTCAGTGAGGAAGGGCCACTTAATTCTGCAGTA...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTAGGCAACATAGAATATaGAAGGGACTCTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECRQHRI*KGLSIL
Trigger: AAGGATGGAGAGTCCCTTTCATATTCTATGTTGCCT...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCACCATTGCTATGTGTTaGAGAGGACTAGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFTIAMC*RGLVND
Trigger: ATCATTTACTAGTCCTCTTCAACACATAGCAATGGT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATTTCAAGGTCTTGGACTaGTTGAGAACGCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDFKVLD*LRTLSL
Trigger: GAGGCTCAGCGTTCTCAAGCAGTCCAAGACCTTGAA...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTGCTTATTAAGAGGGTaGTGTCGTCTGCTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECCLLRG*CRLLVE
Trigger: TTCAACAAGCAGACGACAGCACCCTCTTAATAAGCA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGAAGGCTTAAAGAGATaGTTATTAAGAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEEGLKR*LLRGCC
Trigger: ACAGCACCCTCTTAATAAGCATCTCTTTAAGCCTTC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTGCTCTTTTGAGGCACTaGTATCTCCCACCACATCTA +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCALLRH*YLPPHL
Trigger: TAGATGTGGTGGGAGATAGCAGTGCCTCAAAAGAGC...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAAGCTATGATCTAGAATaGAGCTTAAGCATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWESYDLE*SLSIRV
Trigger: AACCCTGATGCTTAAGCTCCATTCTAGATCATAGCT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCTTTCCACAAATCCAATaGGATTTTTCAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFFPQIQ*DFSVLL
Trigger: GAGAAGCACTGAAAAATCCCATTGGATTTGTGGAAA...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTAACTCTCTGTGGATATaGAAGCCCAATATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECNSLWI*KPNISL
Trigger: AAGGCTGATATTGGGCTTCCATATCCACAGAGAGTT...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATTGAACAACTCTCTGTaGATATGGAAGCCCAATATC +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWELNNSL*IWKPNI
Trigger: GATATTGGGCTTCCATATCCACAGAGAGTTGTTCAA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAAGGCTATGGGTATATTaGTCCCATACGATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILERLWVY*SHTISG
Trigger: GCCTGAGATCGTATGGGACCAATATACCCATAGCCT...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTGTTTGGTGTTCTGCCTaGTACTGGAATGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCVWCSA*YWNASF
Trigger: AAAGCTGGCATTCCAGTACCAGGCAGAACACCAAAC...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCTGCTGGAAAGTAGTTTaGGTCAAGGTAATTGTAACT +
Preference number: 4 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFCWKVV*VKVIVT
Trigger: AGTTACAATTACCTTGACCCAAACTACTTTCCAGCA...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTTCACACACCATGAGCTaGTTAAGGAAGCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCSHTMS*LRKQCH
Trigger: GTGGCATTGCTTCCTTAACCAGCTCATGGTGTGTGA...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTCTTTTCCTTATATCCTaGAGGAGTTGGAGCTATGAT +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECLFLIS*RSWSYD
Trigger: ATCATAGCTCCAACTCCTTCAGGATATAAGGAAAAG...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTTTGATGAGTTGTACTaGCAACTCCAAATACAGAGG +
Preference number: 4 (lower is better)
Translates to: YSPIILCRQMVAYRQMTAFDELY*QLQIQR
Trigger: CCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCTTCTCACAGTTCTCCTaGCAAATGAACATCATTCAA +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTFSQFS*QMNIIQ
Trigger: TTGAATGATGTTCATTTGTCAGGAGAACTGTGAGAA...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAATCATCTGCTATCTTCTaGCAGCGTCGAGATTCTACT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILESSAIF*QRRDST
Trigger: AGTAGAATCTCGACGCTGGCAGAAGATAGCAGATGA...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTTAAAGCCCACATGTTaGACAAATCCACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECLKPTC*TNPLSA
Trigger: AGCTGAAAGTGGATTTGTGCAACATGTGGGCTTTAA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGGTAATTGTAACTGGTaGCCTGAGACACACAGTAGT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEGNCNW*PETHSS
Trigger: ACTACTGTGTGTCTCAGGGCACCAGTTACAATTACC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCTTTCCACAAATCCAATaGGATTTTTCAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTFPQIQ*DFSVLL
Trigger: GAGAAGCACTGAAAAATCCCATTGGATTTGTGGAAA...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATCAACAGTCCACAACTaGTTAAATGTTTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWESTVHN*LNVSGL
Trigger: CAAACCTGAAACATTTAACCAGTTGTGGACTGTTGA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CCA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCTCAACAGTCCACAACTaGTTAAATGTTTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTSTVHN*LNVSGL
Trigger: CAAACCTGAAACATTTAACCAGTTGTGGACTGTTGA...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTCAAGGTAATTGTAACTaGTGCCCTGAGACACACAGT +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCQGNCN*CPETHS
Trigger: ACTGTGTGTCTCAGGGCACCAGTTACAATTACCTTG...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATGTCCAGTTCGTTATTaGTGTTTTCTTTACACTGCT +
Preference number: 4 (lower is better)
Translates to: YLTRTLRKLSCCECHFWECPVRY*CFLYTA
Trigger: AGCAGTGTAAAGAAAACACCAATAACGAACTGGACA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATGACTGGCACTCTCTTTaGCAGATGGCAAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDDWHSL*QMANVQ
Trigger: TTGGACATTTGCCATCTGCCAAAGAGAGTGCCAGTC...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAAAGGAGTTGGAGCTATaGTCTAGAATGGAGCTTAAG +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEKELEL*SRMELK
Trigger: CTTAAGCTCCATTCTAGATCATAGCTCCAACTCCTT...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTAAGAGGACTAGTAAATaGTGTTCTCTTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECKRTSK*CSLPCH
Trigger: ATGACATGGAAGAGAACATCATTTACTAGTCCTCTT...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAACCACCACTGGGACAGTaGGTTCTTTTAAAGTGTATA +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEPPLGQ*VLLKCI
Trigger: TATACACTTTAAAAGAACTCACTGTCCCAGTGGTGG...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTCTACTGAATACCACTaGATAAGCAATGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECSTEYH*ISNALA
Trigger: TGCTAAAGCATTGCTTATTCAGTGGTATTCAGTAGA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGTTTTGCTGTCCTGTTaGCCAATTCATCTGCTATCT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEVLLSC*PIHLLS
Trigger: AGATAGCAGATGAATTGGGCAACAGGACAGCAAAAC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAATGCATGTGAACCCTTaGTCACTGTGCAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEMHVNP*SLCRLN
Trigger: ATTTAGTCTGCACAGTGAGCAAGGGTTCACATGCAT...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTACAAGGGGAAATTCCTaGTCAGGAAACAGGATAGTA +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCTRGNS*SGNRIV
Trigger: TACTATCCTGTTTCCTGAGCAGGAATTTCCCCTTGT...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGCTTTGCCTGAGACTTTaGAAGCCTGGACATATGCTC +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLLCLRL*KPGHML
Trigger: GAGCATATGTCCAGGCTTGCAAAGTCTCAGGCAAAG...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTGAGAAGCACCCAACATaGATAGAAGAAAATCCTACC +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCEKHPT*IEENPT
Trigger: GGTAGGATTTTCTTCTATGCATGTTGGGTGCTTCTC...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATGTTTTGCCTAGTATTTaGTCCCCATGCGTCTGTATT +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDVLPSI*SPCVCI
Trigger: AATACAGACGCATGGGGATCAAATACTAGGCAAAAC...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATCCACCACTGGGACAGTaGGTTCTTTTAAAGTGTATA +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDPPLGQ*VLLKCI
Trigger: TATACACTTTAAAAGAACTCACTGTCCCAGTGGTGG...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAACTATCAAGGAACATTaGAGTTTGGGTATCCGTATC +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILETIKEH*SLGIRI
Trigger: GATACGGATACCCAAACTTCAATGTTCCTTGATAGT...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGATAAGTTTGGTGTTCTaGCTGGTACTGGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLISLVF*LVLECQ
Trigger: CTGGCATTCCAGTACCAGGCAGAACACCAAACTTAT...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGAAGGCTTAAAGAGATaGTTATTAAGAGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEEGLKR*LLRGCC
Trigger: ACAGCACCCTCTTAATAAGCATCTCTTTAAGCCTTC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAATTAAAGCCCACATGTTaGACAAATCCACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILELKPTC*TNPLSA
Trigger: AGCTGAAAGTGGATTTGTGCAACATGTGGGCTTTAA...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTCCTCCAACTTGACCTaGACTTGTGAATCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLSSNLT*TCESVQ
Trigger: TTGCACAGATTCACAAGTGCAGGTCAAGTTGGAGGA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTAGCTATGATCTAGAATaGAGCTTAAGCATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCSYDLE*SLSIRV
Trigger: AACCCTGATGCTTAAGCTCCATTCTAGATCATAGCT...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTATGTCATCTGTTTGCTaGAAAGTAGTTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCMSSVC*KVVWVK
Trigger: CTTGACCCAAACTACTTTCCAGCAAACAGATGACAT...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAAGGAACATTGAAGTTTaGGTATCCGTATCCCCATTT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILERNIEV*VSVSPF
Trigger: AAATGGGGATACGGATACCCAAACTTCAATGTTCCT...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGGCAGTTACTATTTTGTaGTCCTCCAACTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLAVTIL*SSNLTC
Trigger: GCAGGTCAAGTTGGAGGACCACAAAATAGTAACTGC...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTATCATATGCTTGCTTaGCACATAGTAAACACTGTA +
Preference number: 4 (lower is better)
Translates to: LKRSGEKFTRETFAHQECYHMLA*HIVNTV
Trigger: TACAGTGTTTACTATGTGCCAAGCAAGCATATGATA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATACAGTTTATAACAGCTaGATCACTGTCATCAACACC +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDTVYNS*ITVINT
Trigger: GGTGTTGATGACAGTGATTCAGCTGTTATAAACTGT...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTCAGTGCCACATGATCTaGTTCAAAGTAATAAACATC +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCQCHMI*FKVINI
Trigger: GATGTTTATTACTTTGAATCAGATCATGTGGCACTG...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGCTAATAATTCCAGGGTaGGAAGTTAAGCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLLIIPG*EVKLKS
Trigger: GGACTTGAGCTTAACTTCTCACCCTGGAATTATTAG...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGAAACAGGTTCTGTTTaGCTTCTCTCACAATTTTCT +
Preference number: 4 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEETGSV*LLSQFS
Trigger: AGAAAATTGTGAGAGAAGGCAAACAGAACCTGTTTC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATGATTTCTTCAACTACTaGAGAATTAAGTGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDDFFNY*RIKWPF
Trigger: GAAGGGCCACTTAATTCTGCAGTAGTTGAAGAAATC...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTTGCTGGAAAGTAGTTTaGGTCAAGGTAATTGTAACT +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCCWKVV*VKVIVT
Trigger: AGTTACAATTACCTTGACCCAAACTACTTTCCAGCA...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGATTTCCTTTCTGAATTaGCACAGGCTCTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLISFLN*HRLWSL
Trigger: AAGAGACCAGAGCCTGTGCCAATTCAGAAAGGAAAT...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGCTTTTCCTTATATCCTaGAGGAGTTGGAGCTATGAT +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLLFLIS*RSWSYD
Trigger: ATCATAGCTCCAACTCCTTCAGGATATAAGGAAAAG...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGGATTCTCGGGTACTCTaGTGTTTTAAATCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLDSRVL*CFKSVV
Trigger: AACCACTGATTTAAAACAGCAGAGTACCCGAGAATC...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CCA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTATCTGTTTAAATACATaGGGGCTTATCTTCATGAGA +
Preference number: 4 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCICLNT*GLIFMR
Trigger: TCTCATGAAGATAAGCCCCCATGTATTTAAACAGAT...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGAAGAGGACTAGTAAATaGTGTTCTCTTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLKRTSK*CSLPCH
Trigger: ATGACATGGAAGAGAACATCATTTACTAGTCCTCTT...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGGATAAAGACATCATTTaGGCTGAAACACAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLDKDII*AETQSR
Trigger: TCTAGACTGTGTTTCAGCTCAAATGATGTCTTTATC...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR TCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTCACTTCCATTATTTTaGGAGTCACAACATATCCCT +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLSLPLF*ESQHIP
Trigger: AGGGATATGTTGTGACTCTCAAAATAATGGAAGTGA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR GCA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTCTGCCCATTATTCCTaGAACTCTCAAATTAAAACA +
Preference number: 4 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLSAHYS*NSQIKT
Trigger: TGTTTTAATTTGAGAGTTGCAGGAATAATGGGCAGA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
3UTR CAA 72 bp TTACCATCAAGCATTACTATCTTGCCTAATTACAAGTaGAAGGCAGATCTTCTGGCATATTCACAAAACATT +
Preference number: 4 (lower is better)
Translates to: LPSSITILPNYK*KADLLAYSQNI
Trigger: AATGTTTTGTGAATATGCCAGAAGATCTGCCTTCAACTTGTAATTAGGCAAGATAGTAATGCTTGATGGTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS GCA 90 bp GCCGCTCTCCGCCCCCGCCACGGCACTTGCTCGGGTGGCCACCGCTaGAGGAAGCTCGATAGCGGCGCCGCGGCGCTTCCAGGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: AALRPRHGTCSGGHR*RKLDSGAAALPGGS
Trigger: GGACCCACCTGGAAGCGCCGCGGCGCCGCTATCGAGCTTCCTGCAGCGGTGGCCACCCGAGCAAGTGCCGTGGCGGGGGCGGAGAGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370798.5
CDS-3UTR CAA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGACGCAACGGGCCACTaGGGGAGGCGCCGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPDATGH*GRRRRR
Trigger: ACGGCGGCGGCGCCTCCCCAAGTGGCCCGTTGCGTC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370798.5
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGCCCCCGCCACGGCACTaGCTCGGGTGGCCACCGCTG +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLPPPRH*LGWPPL
Trigger: CAGCGGTGGCCACCCGAGCAAGTGCCGTGGCGGGGG...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370798.5
CDS-3UTR CAA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCATCTGAGGACGACTGCTaGAGCCTTCTGGACCATCAC +
Preference number: 5 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPSEDDC*SLLDHH
Trigger: GTGATGGTCCAGAAGGCTCAAGCAGTCGTCCTCAGA...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGGCTGGCAACCTGTTTaGCTGTCCTGTTGCCCAATT +
Preference number: 5 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPGWQPV*LSCCPI
Trigger: AATTGGGCAACAGGACAGCAAAACAGGTTGCCAGCC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS GCA 90 bp TACTCGGCTGGCAACCTGTTTTGCTGTCCTGTTGCCCAATTCATCTaGTATCTTCTGCCAGCGTCGAGATTCTACTTCTTCAGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: YSAGNLFCCPVAQFI*YLLPASRFYFFRRV
Trigger: TACCCTCCTGAAGAAGTAGAATCTCGACGCTGGCAGAAGATAGCAGATGAATTGGGCAACAGGACAGCAAAACAGGTTGCCAGCCGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS-3UTR CAA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAGCTTTGCCTGAGACTTaGCAAGCCTGGACATATGCT +
Preference number: 5 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPALPET*QAWTYA
Trigger: AGCATATGTCCAGGCTTGCAAAGTCTCAGGCAAAGC...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGCCTTAGTCCCAGCTTaGCCTGAGACTTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEALVPA*PETLQA
Trigger: GGCTTGCAAAGTCTCAGGCAAAGCTGGGACTAAGGC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCATCTTCAGGAGGGTATTaGATGAGTAGCTGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPSSGGY*MSSCSS
Trigger: GCTGGAACAGCTACTCATCAAATACCCTCCTGAAGA...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGGTGCAGAGCTGTACTaGACGAGAACACTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEGAELY*TRTLRK
Trigger: CTTCCTGAGTGTTCTCGTCAAGTACAGCTCTGCACC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS GCA 90 bp GAATCACAGAAATCCAAAGACATTTCTGGAGGACAATCCTGGCAATaGCACCGAACACCCTGGATGGGTTCTATGCCACAGTTATCACAC +
Preference number: 5 (lower is better)
Translates to: ESQKSKDISGGQSWQ*HRTPWMGSMPQLSH
Trigger: GTGTGATAACTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGAAATGTCTTTGGATTTCTGTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CCA 90 bp AAAGACATTTCTGGAGGACAATCCTGGCAATGCCACCGAACACCCTaGATGGGTTCTATGCCACAGTTATCACACTTAAAGCCCACATGT +
Preference number: 5 (lower is better)
Translates to: KDISGGQSWQCHRTP*MGSMPQLSHLKPTC
Trigger: ACATGTGGGCTTTAAGTGTGATAACTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGAAATGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS-3UTR CAA 90 bp GGGAAACCTTTGCTCACCAGGAATGTTCAGCTGCTGAACAGTGATCTAGAGCCAATGGGGGCTGTTTCCTaGGAGCTGAAAAATGCAAAA +
Preference number: 5 (lower is better)
Translates to: GKPLLTRNVQLLNSDLEPMGAVS*ELKNAK
Trigger: TTTTGCATTTTTCAGCTCCAAGGAAACAGCCCCCAT...TGGCTCTAGATCACTGTTCAGCAGCTGAACATTCCTGGTGAGCAAAGGTTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS GCA 90 bp TTTCCACAAATCCAATGGGATTTTTCAGTGCTTCTCTCTGGTGCCTaGCTAAACTTTCAAGGTCTTGGACTGCTTGAGAACGCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: FPQIQWDFSVLLSGA*LNFQGLGLLENAEP
Trigger: AGGCTCAGCGTTCTCAAGCAGTCCAAGACCTTGAAAGTTTAGGCAGGCACCAGAGAGAAGCACTGAAAAATCCCATTGGATTTGTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS GCA 90 bp GCAACCTGTTTTGCTGTCCTGTTGCCCAATTCATCTGCTATCTTCTaGCAGCGTCGAGATTCTACTTCTTCAGGAGGGTATTTGATGAGT +
Preference number: 5 (lower is better)
Translates to: ATCFAVLLPNSSAIF*QRRDSTSSGGYLMS
Trigger: ACTCATCAAATACCCTCCTGAAGAAGTAGAATCTCGACGCTGGCAGAAGATAGCAGATGAATTGGGCAACAGGACAGCAAAACAGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CCA 90 bp GAACAAGAATCACAGAAATCCAAAGACATTTCTGGAGGACAATCCTaGCAATGCCACCGAACACCCTGGATGGGTTCTATGCCACAGTTA +
Preference number: 5 (lower is better)
Translates to: EQESQKSKDISGGQS*QCHRTPWMGSMPQL
Trigger: TAACTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGAAATGTCTTTGGATTTCTGTGATTCTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS-3UTR CAA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTAAGGTCTTGGACTGCTaGAGAACGCTGAGCCTCGAG +
Preference number: 5 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCKVLDC*RTLSLE
Trigger: CTCGAGGCTCAGCGTTCTCAAGCAGTCCAAGACCTT...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAGGTGCTGTCGTCTGCTaGTTGAAGACTTTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEGAVVC*LKTFWS
Trigger: ACTCCAAAAAGTCTTCAACAAGCAGACGACAGCACC...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTCACCAGGGAAACCTTaGCTCACCAGGAATGTTCAG +
Preference number: 5 (lower is better)
Translates to: LKRSGEKFTRETFAHQECSPGKP*LTRNVQ
Trigger: CTGAACATTCCTGGTGAGCAAAGGTTTCCCTGGTGA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAACAGGCAGTTACTATTTaGTGGTCCTCCAACTTGACC +
Preference number: 5 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEQAVTI*WSSNLT
Trigger: GGTCAAGTTGGAGGACCACAAAATAGTAACTGCCTG...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS TCA 90 bp TTCCCAAGGCTATGGGTATATTGGTCCCATACGATCTCAGGCAATTaGACAACTCTCTGTGGATATGGAAGCCCAATATCAGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FPRLWVYWSHTISGN*TTLCGYGSPISAFF
Trigger: GAAGAAGGCTGATATTGGGCTTCCATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGTATGGGACCAATATACCCATAGCCTTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS TCA 90 bp GCAGGCAGTTACTATTTTGTGGTCCTCCAACTTGACCTGCACTTGTaGATCTGTGCAAGGCACCTTATGGTCTATATAACTGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: AGSYYFVVLQLDLHL*ICARHLMVYITVLL
Trigger: AAGGAGGACAGTTATATAGACCATAAGGTGCCTTGCACAGATTCACAAGTGCAGGTCAAGTTGGAGGACCACAAAATAGTAACTGCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS GCA 90 bp CTCTCAAGACTTGTGTCCAGTTCGTTATTGGTGTTTTCTTTACACTaGTCTTTTGAGGCACTGCTATCTCCCACCACATCTACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSRLVSSSLLVFSLH*SFEALLSPTTSTSS
Trigger: GGAGGAAGTAGATGTGGTGGGAGATAGCAGTGCCTCAAAAGAGCAGTGTAAAGAAAACACCAATAACGAACTGGACACAAGTCTTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS-3UTR CAA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTAAGGCTATGGGTATATaGGTCCCATACGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: LKRSGEKFTRETFAHQECKAMGI*VPYDLR
Trigger: CCTGAGATCGTATGGGACCAATATACCCATAGCCTT...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCTGTTTTGCTGTCCTGTaGCCCAATTCATCTGCTATC +
Preference number: 5 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTCFAVL*PNSSAI
Trigger: GATAGCAGATGAATTGGGCAACAGGACAGCAAAACA...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGGCTGGCAACCTGTTTaGCTGTCCTGTTGCCCAATT +
Preference number: 5 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEGWQPV*LSCCPI
Trigger: AATTGGGCAACAGGACAGCAAAACAGGTTGCCAGCC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCGCTGTCGTCTGCTTGTaGAAGACTTTTTGGAGTATA +
Preference number: 5 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFAVVCL*KTFWSI
Trigger: TATACTCCAAAAAGTCTTCAACAAGCAGACGACAGC...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTGGTGCAGAGCTGTACTaGACGAGAACACTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCGAELY*TRTLRK
Trigger: CTTCCTGAGTGTTCTCGTCAAGTACAGCTCTGCACC...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTTGTGGTCCTCCAACTaGACCTGCACTTGTGAATCT +
Preference number: 5 (lower is better)
Translates to: YSPIILCRQMVAYRQMTALWSSN*TCTCES
Trigger: AGATTCACAAGTGCAGGTCAAGTTGGAGGACCACAA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTGGCAAATGTCCAATATaGAGTCTTGCCTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: YSPIILCRQMVAYRQMTAGKCPI*SLASEG
Trigger: ACCCTCAGAGGCAAGACTCAATATTGGACATTTGCC...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS TCA 90 bp ACTTGTGTCCAGTTCGTTATTGGTGTTTTCTTTACACTGCTCTTTTaGGGCACTGCTATCTCCCACCACATCTACTTCCTCCTCAGAATC +
Preference number: 5 (lower is better)
Translates to: TCVQFVIGVFFTLLF*GTAISHHIYFLLRI
Trigger: GATTCTGAGGAGGAAGTAGATGTGGTGGGAGATAGCAGTGCCTCAAAAGAGCAGTGTAAAGAAAACACCAATAACGAACTGGACACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS GCA 90 bp ATCTGTTTGCTGGAAAGTAGTTTGGGTCAAGGTAATTGTAACTGGTaGCCTGAGACACACAGTAGTCTCTGTCTAAGAATGTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: ICLLESSLGQGNCNW*PETHSSLCLRMSLT
Trigger: GGTCAGAGACATTCTTAGACAGAGACTACTGTGTGTCTCAGGGCACCAGTTACAATTACCTTGACCCAAACTACTTTCCAGCAAACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CCA 90 bp GTCATCTGTTTGCTGGAAAGTAGTTTGGGTCAAGGTAATTGTAACTaGTGCCCTGAGACACACAGTAGTCTCTGTCTAAGAATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VICLLESSLGQGNCN*CPETHSSLCLRMSL
Trigger: CAGAGACATTCTTAGACAGAGACTACTGTGTGTCTCAGGGCACCAGTTACAATTACCTTGACCCAAACTACTTTCCAGCAAACAGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGAAGGTCTTGGACTGCTaGAGAACGCTGAGCCTCGAG +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLKVLDC*RTLSLE
Trigger: CTCGAGGCTCAGCGTTCTCAAGCAGTCCAAGACCTT...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTCTGAGGACGACTGCTaGAGCCTTCTGGACCATCAC +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLSEDDC*SLLDHH
Trigger: GTGATGGTCCAGAAGGCTCAAGCAGTCGTCCTCAGA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS TCA 90 bp ATTGGCACAGGCTCTGGTCTCTTCTTTGGTGATCTTGATCGTACTTaGGAATTAGAAGAGATTTCTTCAGGATGCGCAATGCTACGATTC +
Preference number: 5 (lower is better)
Translates to: IGTGSGLFFGDLDRT*ELEEISSGCAMLRF
Trigger: GAATCGTAGCATTGCGCATCCTGAAGAAATCTCTTCTAATTCTCAAGTACGATCAAGATCACCAAAGAAGAGACCAGAGCCTGTGCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS GCA 90 bp ACTGGCGGTTCATGTGAAGTCATGAAAGTGGAAGGCTTAAAGAGATaGTTATTAAGAGGGTGCTGTCGTCTGCTTGTTGAAGACTTTTTG +
Preference number: 5 (lower is better)
Translates to: TGGSCEVMKVEGLKR*LLRGCCRLLVEDFL
Trigger: CAAAAAGTCTTCAACAAGCAGACGACAGCACCCTCTTAATAAGCATCTCTTTAAGCCTTCCACTTTCATGACTTCACATGAACCGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAGGTGCTGTCGTCTGCTaGTTGAAGACTTTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEGAVVC*LKTFWS
Trigger: ACTCCAAAAAGTCTTCAACAAGCAGACGACAGCACC...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAAAATCCACTTTCAGCTaGCATTTGCTGAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: YLTRTLRKLSCCECHFWEKSTFS*HLLKFL
Trigger: CAGAAACTTCAGCAAATGCAAGCTGAAAGTGGATTT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCAAATCCACTTTCAGCTaGCATTTGCTGAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTKSTFS*HLLKFL
Trigger: CAGAAACTTCAGCAAATGCAAGCTGAAAGTGGATTT...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTTCCATGTCATCTGTTaGCTGGAAAGTAGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: LKRSGEKFTRETFAHQECFHVIC*LESSLG
Trigger: ACCCAAACTACTTTCCAGCAAACAGATGACATGGAA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCTGTTCTACTGACTCCTaGTCTGATTTTATAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFCSTDS*SDFIGE
Trigger: TTCTCCTATAAAATCAGACAAGGAGTCAGTAGAACA...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAGCTCCAATTTACTAAAGGCCATCAATGACCACCACTGGGACAGTGAGTTCAATCTTTTATGGATCTaGTGCAGACTACAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: SSSNLLKAINDHHWDSEFNLLWI*CRLQKR
Trigger: CCTCTTTTGTAGTCTGCACAAGATCCATAAAAGATT...GAACTCACTGTCCCAGTGGTGGTCATTGATGGCCTTTAGTAAATTGGAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp TACAGTCCAATAATTCTATGTAGGCAGATGGTAGCCTACCGGCAAATGACAGCTTTGCCTAATTACAAGTaGAAGGCAGATCTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: YSPIILCRQMVAYRQMTALPNYK*KADLLA
Trigger: TGCCAGAAGATCTGCCTTCAACTTGTAATTAGGCAA...AGCTGTCATTTGCCGGTAGGCTACCATCTGCCTACATAGAATTATTGGACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS TCA 90 bp ATGGAGCTTAAGCATCAGGGTTTCAGACTCTCTCAGCTTCAGCCATaGAGAATACTAGAACCTCCTAAATTTTTAGCTGAGCTCTATCAG +
Preference number: 5 (lower is better)
Translates to: MELKHQGFRLSQLQP*RILEPPKFLAELYQ
Trigger: CTGATAGAGCTCAGCTAAAAATTTAGGAGGTTCTAGTATTCTTCATGGCTGAAGCTGAGAGAGTCTGAAACCCTGATGCTTAAGCTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000463166.5
CDS TCA 90 bp TTTAGTGTTCCCATCAGGCTGACAGTCATCACAGTTTATAACAGCTaGATCACTGTCATCAACACCATTGACAGCCAAATAGCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: FSVPIRLTVITVYNS*ITVINTIDSQIACD
Trigger: ATCACAGGCTATTTGGCTGTCAATGGTGTTGATGACAGTGATTCAGCTGTTATAAACTGTGATGACTGTCAGCCTGATGGGAACACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAATTAAATGTTTCAGGTTaGGTATCATCACACAAGCGT +
Preference number: 5 (lower is better)
Translates to: YLTRTLRKLSCCECHFWELNVSG*VSSHKR
Trigger: ACGCTTGTGTGATGATACCAAACCTGAAACATTTAA...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAATGTTTTGCTGTCCTGTaGCCCAATTCATCTGCTATC +
Preference number: 5 (lower is better)
Translates to: PSMTTTGTVSSFKVYILECFAVL*PNSSAI
Trigger: GATAGCAGATGAATTGGGCAACAGGACAGCAAAACA...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp TACTTGACGAGAACACTCAGGAAGCTCTCATGCTGTGAGTGTCATTTCTGGGAAAGTATATATATAAGTTaGGTGTTCTGCCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: YLTRTLRKLSCCECHFWESIYIS*VFCLVL
Trigger: CAGTACCAGGCAGAACACCAAACTTATATATATACT...TTCCCAGAAATGACACTCACAGCATGAGAGCTTCCTGAGTGTTCTCGTCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTTGCTGGAAAGTAGTTaGGGTCAAGGTAATTGTAAC +
Preference number: 5 (lower is better)
Translates to: LKRSGEKFTRETFAHQECLLESS*GQGNCN
Trigger: GTTACAATTACCTTGACCCAAACTACTTTCCAGCAA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCATTAGGCAGTTTTCTTaGATGAGTTGTACTGACAAC +
Preference number: 5 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTIRQFS*MSCTDN
Trigger: GTTGTCAGTACAACTCATCAAAGAAAACTGCCTAAT...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAAATGCATGTGAACCCTaGCTCACTGTGCAGACTAAA +
Preference number: 5 (lower is better)
Translates to: PSMTTTGTVSSFKVYILENACEP*LTVQTK
Trigger: TTTAGTCTGCACAGTGAGCAAGGGTTCACATGCATT...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp ACATCAGGAAAACAGAATGTAAGGCAACATCTGCACACCTCCACTCCTAACACCCCCTGCCTCATAGAGTaGTTAAGAATTAGTTATCAT +
Preference number: 5 (lower is better)
Translates to: TSGKQNVRQHLHTSTPNTPCLIE*LRISYH
Trigger: ATGATAACTAATTCTTAACAACTCTATGAGGCAGGG...GGTGTTAGGAGTGGAGGTGTGCAGATGTTGCCTTACATTCTGTTTTCCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS CCA 90 bp GACAGCCAAATAGCCTGTGATTTCTTCAACTACTGCAGAATTAAGTaGCCCTTCCTCACTGACATTCACCTTTTTAATTTCCCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: DSQIACDFFNYCRIK*PFLTDIHLFNFPFL
Trigger: GAGAAAAGGGAAATTAAAAAGGTGAATGTCAGTGAGGAAGGGCCACTTAATTCTGCAGTAGTTGAAGAAATCACAGGCTATTTGGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAATACGATCTCAGGCAATaGAACAACTCTCTGTGGATA +
Preference number: 5 (lower is better)
Translates to: PSMTTTGTVSSFKVYILEYDLRQ*NNSLWI
Trigger: TATCCACAGAGAGTTGTTCAATTGCCTGAGATCGTA...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTCTTCAGGAGGGTATTaGATGAGTAGCTGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLSSGGY*MSSCSS
Trigger: GCTGGAACAGCTACTCATCAAATACCCTCCTGAAGA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp TTTTCTTTGATGAGTTGTACTGACAACTCCAAATACAGAGGCAGAAGGCTGTGTTTCCATGTCATCTGTTaGCTGGAAAGTAGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: FSLMSCTDNSKYRGRRLCFHVIC*LESSLG
Trigger: ACCCAAACTACTTTCCAGCAAACAGATGACATGGAA...ACACAGCCTTCTGCCTCTGTATTTGGAGTTGTCAGTACAACTCATCAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp TACACAGTTACTACCACTGGCACTTTTCACCATAGTTTGTACACATCACATGATGCTCTGGTCTCTTCTTaGGTGATCTTGATCGTACTT +
Preference number: 5 (lower is better)
Translates to: YTVTTTGTFHHSLYTSHDALVSS*VILIVL
Trigger: AAGTACGATCAAGATCACCAAAGAAGAGACCAGAGC...ATCATGTGATGTGTACAAACTATGGTGAAAAGTGCCAGTGGTAGTAACTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp CTAAAACGCAGTGGTGAAAAATTCACCAGGGAAACCTTTGCTCACCAGGAATGTTTCACTTCCATTATTTaGAGAGTCACAACATATCCC +
Preference number: 5 (lower is better)
Translates to: LKRSGEKFTRETFAHQECFTSII*RVTTYP
Trigger: GGGATATGTTGTGACTCTCAAAATAATGGAAGTGAA...ACATTCCTGGTGAGCAAAGGTTTCCCTGGTGAATTTTTCACCACTGCGTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS TCA 90 bp GGAAATATAATCTCTTTTCCTTATATCCTGAAGGAGTTGGAGCTATaGTCTAGAATGGAGCTTAAGCATCAGGGTTTCAGACTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: GNIISFPYILKELEL*SRMELKHQGFRLSQ
Trigger: CTGAGAGAGTCTGAAACCCTGATGCTTAAGCTCCATTCTAGATCATAGCTCCAACTCCTTCAGGATATAAGGAAAAGAGATTATATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000414381.5
ENST00000433749.5
ENST00000463166.5
CDS GCA 90 bp ATCAACACCATTGACAGCCAAATAGCCTGTGATTTCTTCAACTACTaGAGAATTAAGTGGCCCTTCCTCACTGACATTCACCTTTTTAAT +
Preference number: 5 (lower is better)
Translates to: INTIDSQIACDFFNY*RIKWPFLTDIHLFN
Trigger: ATTAAAAAGGTGAATGTCAGTGAGGAAGGGCCACTTAATTCTGCAGTAGTTGAAGAAATCACAGGCTATTTGGCTGTCAATGGTGTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGGCATACTCTCAAGACTaGTGTCCAGTTCGTTATTGG +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLAYSQD*CPVRYW
Trigger: CCAATAACGAACTGGACACAAGTCTTGAGAGTATGC...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAAAGTATATATATAAGTTaGGTGTTCTGCCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: PSMTTTGTVSSFKVYILESIYIS*VFCLVL
Trigger: CAGTACCAGGCAGAACACCAAACTTATATATATACT...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGGCTGTCGTCTGCTTGTaGAAGACTTTTTGGAGTATA +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLAVVCL*KTFWSI
Trigger: TATACTCCAAAAAGTCTTCAACAAGCAGACGACAGC...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp CCATCAATGACCACCACTGGGACAGTGAGTTCTTTTAAAGTGTATATCCTAGAATTAACAATGATACCATaGCTATGTGTTGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: PSMTTTGTVSSFKVYILELTMIP*LCVEED
Trigger: GTCCTCTTCAACACATAGCAATGGTATCATTGTTAA...TTCTAGGATATACACTTTAAAAGAACTCACTGTCCCAGTGGTGGTCATTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGATCATGATCCACTCATaGGGAAACCTGTACAACCAA +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLIMIHS*GNLYNQ
Trigger: TTGGTTGTACAGGTTTCCCAATGAGTGGATCATGAT...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGAGCTCGTTTAGTCCCTaGAAAATCTGCATCATTGTC +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLSSFSP*KICIIV
Trigger: GACAATGATGCAGATTTTCAAGGGACTAAACGAGCT...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGGTGTCCAGTTCGTTATaGGTGTTTTCTTTACACTGC +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLVSSSL*VFSLHC
Trigger: GCAGTGTAAAGAAAACACCAATAACGAACTGGACAC...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS GCA 90 bp GAAGTCATGAAAGTGGAAGGCTTAAAGAGATGCTTATTAAGAGGGTaGTGTCGTCTGCTTGTTGAAGACTTTTTGGAGTATATATATAAG +
Preference number: 5 (lower is better)
Translates to: EVMKVEGLKRCLLRG*CRLLVEDFLEYIYK
Trigger: CTTATATATATACTCCAAAAAGTCTTCAACAAGCAGACGACAGCACCCTCTTAATAAGCATCTCTTTAAGCCTTCCACTTTCATGACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTTGCTGGAAAGTAGTTaGGGTCAAGGTAATTGTAAC +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLLLESS*GQGNCN
Trigger: GTTACAATTACCTTGACCCAAACTACTTTCCAGCAA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000370801.8
CDS GCA 90 bp AAGAACATCTACAACTTAAAGTATATCTCTGAGCATACTGGAATGTaGCCTAGTAGCACTCTATCAAGTTCTAATCAACCACATAACTAC +
Preference number: 5 (lower is better)
Translates to: KNIYNLKYISEHTGM*PSSTLSSSNQPHNY
Trigger: GTAGTTATGTGGTTGATTAGAACTTGATAGAGTGCTACTAGGGCACATTCCAGTATGCTCAGAGATATACTTTAAGTTGTAGATGTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469944.1
CDS-3UTR CAA 90 bp AGCAAACACCATCATTGGTTAAAACTTTGTCTAAAGAAGTCAGTTTCTGTGCTGTACTATCAAGGAACATaGAAGTTTGGGTATCCGTAT +
Preference number: 5 (lower is better)
Translates to: SKHHHWLKLCLKKSVSVLYYQGT*KFGYPY
Trigger: ATACGGATACCCAAACTTCAATGTTCCTTGATAGTA...CAGCACAGAAACTGACTTCTTTAGACAAAGTTTTAACCAATGATGGTGTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS GCA 72 bp CGCCCCCGCCACGGCACTTGCTCGGGTGGCCACCGCTaGAGGAAGCTCGATAGCGGCGCCGCGGCGCTTCCA +
Preference number: 6 (lower is better)
Translates to: RPRHGTCSGGHR*RKLDSGAAALP
Trigger: TGGAAGCGCCGCGGCGCCGCTATCGAGCTTCCTGCAGCGGTGGCCACCCGAGCAAGTGCCGTGGCGGGGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370798.5
ENST00000463166.5
CDS TCA 72 bp AGTGGGACTACCTCTGGTAGGGGCTGCCCTTCGTGGTaGGGTTCTCAGAGTATAACGATGTTCTTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: SGTTSGRGCPSW*GSQSITMFLRF
Trigger: GAACCTCAAGAACATCGTTATACTCTGAGAACCTCACCACGAAGGGCAGCCCCTACCAGAGGTAGTCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS GCA 72 bp TCTGTACTCGGCTGGCAACCTGTTTTGCTGTCCTGTTaGCCAATTCATCTGCTATCTTCTGCCAGCGTCGAG +
Preference number: 6 (lower is better)
Translates to: SVLGWQPVLLSC*PIHLLSSASVE
Trigger: CTCGACGCTGGCAGAAGATAGCAGATGAATTGGGCAACAGGACAGCAAAACAGGTTGCCAGCCGAGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CAA 72 bp TTCTGTACTCGGCTGGCAACCTGTTTTGCTGTCCTGTaGCCCAATTCATCTGCTATCTTCTGCCAGCGTCGA +
Preference number: 6 (lower is better)
Translates to: FCTRLATCFAVL*PNSSAIFCQRR
Trigger: TCGACGCTGGCAGAAGATAGCAGATGAATTGGGCAACAGGACAGCAAAACAGGTTGCCAGCCGAGTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS TCA 72 bp TCAGAAAAGGGCCCTGTAGCTGGCTCAGTAGTCAGCTaGTTAACATGTTCCACAGGCAAGCAGGCAGTTACT +
Preference number: 6 (lower is better)
Translates to: SEKGPVAGSVVS*LTCSTGKQAVT
Trigger: AGTAACTGCCTGCTTGCCTGTGGAACATGTTAATCAGCTGACTACTGAGCCAGCTACAGGGCCCTTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS GCA 72 bp AAATCCAAAGACATTTCTGGAGGACAATCCTGGCAATaGCACCGAACACCCTGGATGGGTTCTATGCCACAG +
Preference number: 6 (lower is better)
Translates to: KSKDISGGQSWQ*HRTPWMGSMPQ
Trigger: CTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGAAATGTCTTTGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CCA 72 bp TCTGGAGGACAATCCTGGCAATGCCACCGAACACCCTaGATGGGTTCTATGCCACAGTTATCACACTTAAAG +
Preference number: 6 (lower is better)
Translates to: SGGQSWQCHRTP*MGSMPQLSHLK
Trigger: CTTTAAGTGTGATAACTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS GCA 72 bp GGCAACCTGTTTTGCTGTCCTGTTGCCCAATTCATCTaGTATCTTCTGCCAGCGTCGAGATTCTACTTCTTC +
Preference number: 6 (lower is better)
Translates to: GNLFCCPVAQFI*YLLPASRFYFF
Trigger: GAAGAAGTAGAATCTCGACGCTGGCAGAAGATAGCAGATGAATTGGGCAACAGGACAGCAAAACAGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CCA 72 bp TCACAGAAATCCAAAGACATTTCTGGAGGACAATCCTaGCAATGCCACCGAACACCCTGGATGGGTTCTATG +
Preference number: 6 (lower is better)
Translates to: SQKSKDISGGQS*QCHRTPWMGSM
Trigger: CATAGAACCCATCCAGGGTGTTCGGTGGCATTGCCAGGATTGTCCTCCAGAAATGTCTTTGGATTTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CAA 90 bp TGTTCCACAGGCAAGCAGGCAGTTACTATTTTGTGGTCCTCCAACTaGACCTGCACTTGTGAATCTGTGCAAGGCACCTTATGGTCTATA +
Preference number: 6 (lower is better)
Translates to: CSTGKQAVTILWSSN*TCTCESVQGTLWSI
Trigger: TATAGACCATAAGGTGCCTTGCACAGATTCACAAGTGCAGGTCAAGTTGGAGGACCACAAAATAGTAACTGCCTGCTTGCCTGTGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 90 bp CAGGAGATGGTTCAGGTTCTCCGGAGGCTGGCATACTCTCAAGACTaGTGTCCAGTTCGTTATTGGTGTTTTCTTTACACTGCTCTTTTG +
Preference number: 6 (lower is better)
Translates to: QEMVQVLRRLAYSQD*CPVRYWCFLYTALL
Trigger: CAAAAGAGCAGTGTAAAGAAAACACCAATAACGAACTGGACACAAGTCTTGAGAGTATGCCAGCCTCCGGAGAACCTGAACCATCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CCA 72 bp GTCCCATACGATCTCAGGCAATTGAACAACTCTCTGTaGATATGGAAGCCCAATATCAGCCTTCTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: VPYDLRQLNNSL*IWKPNISLLLE
Trigger: CTCCAGAAGAAGGCTGATATTGGGCTTCCATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGTATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS CCA 72 bp ACATGTTCCACAGGCAAGCAGGCAGTTACTATTTTGTaGTCCTCCAACTTGACCTGCACTTGTGAATCTGTG +
Preference number: 6 (lower is better)
Translates to: TCSTGKQAVTIL*SSNLTCTCESV
Trigger: CACAGATTCACAAGTGCAGGTCAAGTTGGAGGACCACAAAATAGTAACTGCCTGCTTGCCTGTGGAACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS TCA 72 bp ACATCAGGATCATCATCTTCCTCTTCTGTAATGTGCTaGCTGGCACTCTCTTTGGCAGATGGCAAATGTCCA +
Preference number: 6 (lower is better)
Translates to: TSGSSSSSSVMC*LALSLADGKCP
Trigger: TGGACATTTGCCATCTGCCAAAGAGAGTGCCAGTCAGCACATTACAGAAGAGGAAGATGATGATCCTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 72 bp GTTCAGGTTCTCCGGAGGCTGGCATACTCTCAAGACTaGTGTCCAGTTCGTTATTGGTGTTTTCTTTACACT +
Preference number: 6 (lower is better)
Translates to: VQVLRRLAYSQD*CPVRYWCFLYT
Trigger: AGTGTAAAGAAAACACCAATAACGAACTGGACACAAGTCTTGAGAGTATGCCAGCCTCCGGAGAACCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 90 bp ATTCCCAAGGCTATGGGTATATTGGTCCCATACGATCTCAGGCAATaGAACAACTCTCTGTGGATATGGAAGCCCAATATCAGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: IPKAMGILVPYDLRQ*NNSLWIWKPNISLL
Trigger: AAGAAGGCTGATATTGGGCTTCCATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGTATGGGACCAATATACCCATAGCCTTGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS TCA 72 bp GCCATACTATGGCAAGTCCCTACAATACGGTCATCATaGTCCACTCATTGGGAAACCTGTACAACCAAAGAT +
Preference number: 6 (lower is better)
Translates to: AILWQVPTIRSS*STHWETCTTKD
Trigger: ATCTTTGGTTGTACAGGTTTCCCAATGAGTGGATCATGATGACCGTATTGTAGGGACTTGCCATAGTATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370801.8
ENST00000414381.5
ENST00000433749.5
ENST00000463166.5
CDS TCA 72 bp CAGTTCGTTATTGGTGTTTTCTTTACACTGCTCTTTTaGGGCACTGCTATCTCCCACCACATCTACTTCCTC +
Preference number: 6 (lower is better)
Translates to: QFVIGVFFTLLF*GTAISHHIYFL
Trigger: GAGGAAGTAGATGTGGTGGGAGATAGCAGTGCCTCAAAAGAGCAGTGTAAAGAAAACACCAATAACGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS GCA 72 bp CTGGAAAGTAGTTTGGGTCAAGGTAATTGTAACTGGTaGCCTGAGACACACAGTAGTCTCTGTCTAAGAATG +
Preference number: 6 (lower is better)
Translates to: LESSLGQGNCNW*PETHSSLCLRM
Trigger: CATTCTTAGACAGAGACTACTGTGTGTCTCAGGGCACCAGTTACAATTACCTTGACCCAAACTACTTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CCA 72 bp TTGCTGGAAAGTAGTTTGGGTCAAGGTAATTGTAACTaGTGCCCTGAGACACACAGTAGTCTCTGTCTAAGA +
Preference number: 6 (lower is better)
Translates to: LLESSLGQGNCN*CPETHSSLCLR
Trigger: TCTTAGACAGAGACTACTGTGTGTCTCAGGGCACCAGTTACAATTACCTTGACCCAAACTACTTTCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CAA 72 bp GCTATGGGTATATTGGTCCCATACGATCTCAGGCAATaGAACAACTCTCTGTGGATATGGAAGCCCAATATC +
Preference number: 6 (lower is better)
Translates to: AMGILVPYDLRQ*NNSLWIWKPNI
Trigger: GATATTGGGCTTCCATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGTATGGGACCAATATACCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS CAA 72 bp TTAACATGTTCCACAGGCAAGCAGGCAGTTACTATTTaGTGGTCCTCCAACTTGACCTGCACTTGTGAATCT +
Preference number: 6 (lower is better)
Translates to: LTCSTGKQAVTI*WSSNLTCTCES
Trigger: AGATTCACAAGTGCAGGTCAAGTTGGAGGACCACAAAATAGTAACTGCCTGCTTGCCTGTGGAACATGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 72 bp GCTGGCATACTCTCAAGACTTGTGTCCAGTTCGTTATaGGTGTTTTCTTTACACTGCTCTTTTGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: AGILSRLVSSSL*VFSLHCSFEAL
Trigger: CAGTGCCTCAAAAGAGCAGTGTAAAGAAAACACCAATAACGAACTGGACACAAGTCTTGAGAGTATGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS TCA 72 bp CTATGGGTATATTGGTCCCATACGATCTCAGGCAATTaGACAACTCTCTGTGGATATGGAAGCCCAATATCA +
Preference number: 6 (lower is better)
Translates to: LWVYWSHTISGN*TTLCGYGSPIS
Trigger: TGATATTGGGCTTCCATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGTATGGGACCAATATACCCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS TCA 72 bp GGCTCTGGTCTCTTCTTTGGTGATCTTGATCGTACTTaGGAATTAGAAGAGATTTCTTCAGGATGCGCAATG +
Preference number: 6 (lower is better)
Translates to: GSGLFFGDLDRT*ELEEISSGCAM
Trigger: CATTGCGCATCCTGAAGAAATCTCTTCTAATTCTCAAGTACGATCAAGATCACCAAAGAAGAGACCAGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000433749.5
CDS TCA 72 bp CCCATCAGGCTGACAGTCATCACAGTTTATAACAGCTaGATCACTGTCATCAACACCATTGACAGCCAAATA +
Preference number: 6 (lower is better)
Translates to: PIRLTVITVYNS*ITVINTIDSQI
Trigger: TATTTGGCTGTCAATGGTGTTGATGACAGTGATTCAGCTGTTATAAACTGTGATGACTGTCAGCCTGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS GCA 72 bp AAGACATCGACAAGCTCGTTTAGTCCCTTGAAAATCTaGATCATTGTCCACTACTGTACTCCTCTGTTCTAC +
Preference number: 6 (lower is better)
Translates to: KTSTSSFSPLKI*IIVHYCTPLFY
Trigger: GTAGAACAGAGGAGTACAGTAGTGGACAATGATGCAGATTTTCAAGGGACTAAACGAGCTTGTCGATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS GCA 72 bp ATTGACAGCCAAATAGCCTGTGATTTCTTCAACTACTaGAGAATTAAGTGGCCCTTCCTCACTGACATTCAC +
Preference number: 6 (lower is better)
Translates to: IDSQIACDFFNY*RIKWPFLTDIH
Trigger: GTGAATGTCAGTGAGGAAGGGCCACTTAATTCTGCAGTAGTTGAAGAAATCACAGGCTATTTGGCTGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CCA 72 bp TACGATCTCAGGCAATTGAACAACTCTCTGTGGATATaGAAGCCCAATATCAGCCTTCTTCTGGAGTTTTTC +
Preference number: 6 (lower is better)
Translates to: YDLRQLNNSLWI*KPNISLLLEFF
Trigger: GAAAAACTCCAGAAGAAGGCTGATATTGGGCTTCCATATCCACAGAGAGTTGTTCAATTGCCTGAGATCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS CAA 90 bp CTCACAATCATCCAGTATAAGACATCGACAAGCTCGTTTAGTCCCTaGAAAATCTGCATCATTGTCCACTACTGTACTCCTCTGTTCTAC +
Preference number: 6 (lower is better)
Translates to: LTIIQYKTSTSSFSP*KICIIVHYCTPLFY
Trigger: GTAGAACAGAGGAGTACAGTAGTGGACAATGATGCAGATTTTCAAGGGACTAAACGAGCTTGTCGATGTCTTATACTGGATGATTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS TCA 72 bp AAGCATCAGGGTTTCAGACTCTCTCAGCTTCAGCCATaGAGAATACTAGAACCTCCTAAATTTTTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: KHQGFRLSQLQP*RILEPPKFLAE
Trigger: CTCAGCTAAAAATTTAGGAGGTTCTAGTATTCTTCATGGCTGAAGCTGAGAGAGTCTGAAACCCTGATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000463166.5
CDS TCA 72 bp GTCATCATCTTCATCCATATACACTGGCGGTTCATGTaGAGTCATGAAAGTGGAAGGCTTAAAGAGATGCTT +
Preference number: 6 (lower is better)
Translates to: VIIFIHIHWRFM*SHESGRLKEML
Trigger: AAGCATCTCTTTAAGCCTTCCACTTTCATGACTTCACATGAACCGCCAGTGTATATGGATGAAGATGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000476275.5
ENST00000481346.5
CDS CCA 72 bp CTGTCCTCCTTCCTACTATCAAGGAACATTGAAGTTTaGGTATCCGTATCCCCATTTTCAGCTACTGATTTT +
Preference number: 6 (lower is better)
Translates to: LSSFLLSRNIEV*VSVSPFSATDF
Trigger: AAAATCAGTAGCTGAAAATGGGGATACGGATACCCAAACTTCAATGTTCCTTGATAGTAGGAAGGAGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 72 bp ATCCAGTATAAGACATCGACAAGCTCGTTTAGTCCCTaGAAAATCTGCATCATTGTCCACTACTGTACTCCT +
Preference number: 6 (lower is better)
Translates to: IQYKTSTSSFSP*KICIIVHYCTP
Trigger: AGGAGTACAGTAGTGGACAATGATGCAGATTTTCAAGGGACTAAACGAGCTTGTCGATGTCTTATACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS CAA 72 bp CACTCTTCTTATAACAGACTCCAAGTGACAACTCCTTaGTACCAAACACTGAAGCCTTTCACAAACATGGCA +
Preference number: 6 (lower is better)
Translates to: HSSYNRLQVTTP*YQTLKPFTNMA
Trigger: TGCCATGTTTGTGAAAGGCTTCAGTGTTTGGTACAAAGGAGTTGTCACTTGGAGTCTGTTATAAGAAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469944.1
CDS CAA 90 bp TCTGCATCATTGTCCACTACTGTACTCCTCTGTTCTACTGACTCCTaGTCTGATTTTATAGGAGAATCTTCTTCTGAACTGTTTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SASLSTTVLLCSTDS*SDFIGESSSELFGA
Trigger: AGCACCAAACAGTTCAGAAGAAGATTCTCCTATAAAATCAGACAAGGAGTCAGTAGAACAGAGGAGTACAGTAGTGGACAATGATGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS CAA 90 bp GAGAAGCTCAGCGAAAACATGATCCTACATAAAGTAACCCTTGACTaGAAAACCCACTCTTCTTATAACAGACTCCAAGTGACAACTCCT +
Preference number: 6 (lower is better)
Translates to: EKLSENMILHKVTLD*KTHSSYNRLQVTTP
Trigger: AGGAGTTGTCACTTGGAGTCTGTTATAAGAAGAGTGGGTTTTCAAGTCAAGGGTTACTTTATGTAGGATCATGTTTTCGCTGAGCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469944.1
CDS TCA 72 bp ATCTCTTTTCCTTATATCCTGAAGGAGTTGGAGCTATaGTCTAGAATGGAGCTTAAGCATCAGGGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: ISFPYILKELEL*SRMELKHQGFR
Trigger: TCTGAAACCCTGATGCTTAAGCTCCATTCTAGATCATAGCTCCAACTCCTTCAGGATATAAGGAAAAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000414381.5
ENST00000433749.5
ENST00000463166.5
CDS TCA 72 bp TATATAACTGTCCTCCTTCCTACTATCAAGGAACATTaGAGTTTGGGTATCCGTATCCCCATTTTCAGCTAC +
Preference number: 6 (lower is better)
Translates to: YITVLLPTIKEH*SLGIRIPIFSY
Trigger: GTAGCTGAAAATGGGGATACGGATACCCAAACTTCAATGTTCCTTGATAGTAGGAAGGAGGACAGTTATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 72 bp TTGTCCACTACTGTACTCCTCTGTTCTACTGACTCCTaGTCTGATTTTATAGGAGAATCTTCTTCTGAACTG +
Preference number: 6 (lower is better)
Translates to: LSTTVLLCSTDS*SDFIGESSSEL
Trigger: CAGTTCAGAAGAAGATTCTCCTATAAAATCAGACAAGGAGTCAGTAGAACAGAGGAGTACAGTAGTGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370801.8
CDS CAA 72 bp CTATATAACTGTCCTCCTTCCTACTATCAAGGAACATaGAAGTTTGGGTATCCGTATCCCCATTTTCAGCTA +
Preference number: 6 (lower is better)
Translates to: LYNCPPSYYQGT*KFGYPYPHFQL
Trigger: TAGCTGAAAATGGGGATACGGATACCCAAACTTCAATGTTCCTTGATAGTAGGAAGGAGGACAGTTATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 90 bp CCTTATGGTCTATATAACTGTCCTCCTTCCTACTATCAAGGAACATaGAAGTTTGGGTATCCGTATCCCCATTTTCAGCTACTGATTTTT +
Preference number: 6 (lower is better)
Translates to: PYGLYNCPPSYYQGT*KFGYPYPHFQLLIF
Trigger: AAAAATCAGTAGCTGAAAATGGGGATACGGATACCCAAACTTCAATGTTCCTTGATAGTAGGAAGGAGGACAGTTATATAGACCATAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370801.8
ENST00000476275.5
CDS CAA 90 bp TTGAAAACCCACTCTTCTTATAACAGACTCCAAGTGACAACTCCTTaGTACCAAACACTGAAGCCTTTCACAAACATGGCAAAACATTAC +
Preference number: 6 (lower is better)
Translates to: LKTHSSYNRLQVTTP*YQTLKPFTNMAKHY
Trigger: GTAATGTTTTGCCATGTTTGTGAAAGGCTTCAGTGTTTGGTACAAAGGAGTTGTCACTTGGAGTCTGTTATAAGAAGAGTGGGTTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469944.1
CDS CAA 72 bp AAATTCTCTTTCAAAATTCCCAAGGCTATGGGTATATaGGTCCCATACGATCTCAGGCAATTGAACAACTCT +
Preference number: 6 (lower is better)
Translates to: KFSFKIPKAMGI*VPYDLRQLNNS
Trigger: AGAGTTGTTCAATTGCCTGAGATCGTATGGGACCAATATACCCATAGCCTTGGGAATTTTGAAAGAGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370798.5
ENST00000370801.8
ENST00000474746.1
ENST00000476195.5
ENST00000476275.5
ENST00000481346.5
CDS GCA 72 bp TACAACTTAAAGTATATCTCTGAGCATACTGGAATGTaGCCTAGTAGCACTCTATCAAGTTCTAATCAACCA +
Preference number: 6 (lower is better)
Translates to: YNLKYISEHTGM*PSSTLSSSNQP
Trigger: TGGTTGATTAGAACTTGATAGAGTGCTACTAGGGCACATTCCAGTATGCTCAGAGATATACTTTAAGTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469944.1
CDS CCA 72 bp GAAATATTTATTACCTGTTCTTCAACAGTCCACAACTaGTTAAATGTTTCAGGTTTGGTATCATCACACAAG +
Preference number: 6 (lower is better)
Translates to: EIFITCSSTVHN*LNVSGLVSSHK
Trigger: CTTGTGTGATGATACCAAACCTGAAACATTTAACCAGTTGTGGACTGTTGAAGAACAGGTAATAAATATTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476275.5