RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZWILCH (Homo sapiens)

Ensembl gene IDs: ENSG00000174442

Ensembl transcript IDs: ENST00000307897.10, ENST00000446801.6, ENST00000535141.6, ENST00000561583.5, ENST00000563698.5, ENST00000564179.5, ENST00000564309.5, ENST00000565627.5, ENST00000565960.1, ENST00000567816.1, ENST00000567926.5, ENST00000569489.1, ENST00000613446.4

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTaGTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGAGACAG +
Preference number: 1 (lower is better)
Translates to: GDRGTHCLLPLCPHH*CSTNAPPEEAELRQ
Trigger: CTGTCTCAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR GCA 90 bp CTAAGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTaGTCCCTCTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTC +
Preference number: 1 (lower is better)
Translates to: LSHMQMVTEIVVPTV*SLCVLITAVLLMLL
Trigger: GAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR TCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTCTCCCTTTTCTGCTTTaGGGGTTTCCATACATTGCT +
Preference number: 2 (lower is better)
Translates to: VTEIVVPTVCSLCVLITALPFLL*GFPYIA
Trigger: AGCAATGTATGGAAACCCTCAAAGCAGAAAAGGGAG...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR TCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCTCCCTTTTCTGCTTTaGGGGTTTCCATACATTGCT +
Preference number: 2 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHLPFLL*GFPYIA
Trigger: AGCAATGTATGGAAACCCTCAAAGCAGAAAAGGGAG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR TCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCTGAGGAGGCAGAGCTaGGACAGGATTATCAATTTT +
Preference number: 2 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHLRRQS*DRIINF
Trigger: AAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGAGGGTTTCCATACATTaGTGTTTTCAGGTTCTACAA +
Preference number: 2 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLRVSIH*CFQVLQ
Trigger: TTGTAGAACCTGAAAACAGCAATGTATGGAAACCCT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR CAA 90 bp CTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCATTTCAGAGCCCTaGCTAAGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACT +
Preference number: 2 (lower is better)
Translates to: LFSFVVLVLFVISEP*LSHMQMVTEIVVPT
Trigger: AGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACTTAGCAAGGGCTCTGAAATGACAAAGAGAACGAGCACCACAAATGAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCTGGTTACGGAGATCGTaGTACCCACTGTCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVWLRRS*YPLSAP
Trigger: GGGAGCAGACAGTGGGTACCACGATCTCCGTAACCA...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR TCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAACTCCCTTTTCTGCTTTaGGGGTTTCCATACATTGCT +
Preference number: 2 (lower is better)
Translates to: PEEAELRQDYQFWSFIRELPFLL*GFPYIA
Trigger: AGCAATGTATGGAAACCCTCAAAGCAGAAAAGGGAG...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTACGTGAGGATGTCCAGTaGCTTATTTATCTCAGTAAC +
Preference number: 2 (lower is better)
Translates to: ALETCSINNQMLAAGESVREDVQ*LIYLSN
Trigger: GTTACTGAGATAAATAAGGCACTGGACATCCTCACG...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
3UTR-3UTR CCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTTGGTTACGGAGATCGTaGTACCCACTGTCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSWLRRS*YPLSAP
Trigger: GGGAGCAGACAGTGGGTACCACGATCTCCGTAACCA...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR TCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACCTGAGGAGGCAGAGCTaGGACAGGATTATCAATTTT +
Preference number: 2 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYLRRQS*DRIINF
Trigger: AAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAG...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCTCTTCCTCCCTTTTCTaGTTTGAGGGTTTCCATACA +
Preference number: 2 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVSSSLF*FEGFHT
Trigger: TGTATGGAAACCCTCAAAGCAGAAAAGGGAGGAAGA...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACGCCAATAAAGCAACATaGAATCCCCCTCAACAAATT +
Preference number: 2 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYANKAT*NPPQQI
Trigger: AATTTGTTGAGGGGGATTGCATGTTGCTTTATTGGC...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACTGTTCTCATTTGTGGTaGTCGTTCTCTTTGTCATTT +
Preference number: 2 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYCSHLW*SFSLSF
Trigger: AAATGACAAAGAGAACGAGCACCACAAATGAGAACA...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTAGGGTTTCCATACATTaGTGTTTTCAGGTTCTACAA +
Preference number: 2 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIRVSIH*CFQVLQ
Trigger: TTGTAGAACCTGAAAACAGCAATGTATGGAAACCCT...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTTCTTCCTCCCTTTTCTaGTTTGAGGGTTTCCATACA +
Preference number: 2 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSSSSLF*FEGFHT
Trigger: TGTATGGAAACCCTCAAAGCAGAAAAGGGAGGAAGA...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTCGTGAGGATGTCCAGTaGCTTATTTATCTCAGTAAC +
Preference number: 2 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSREDVQ*LIYLSN
Trigger: GTTACTGAGATAAATAAGGCACTGGACATCCTCACG...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR GCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTAGGGTTTCCATACATTaGTGTTTTCAGGTTCTACAA +
Preference number: 2 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSRVSIH*CFQVLQ
Trigger: TTGTAGAACCTGAAAACAGCAATGTATGGAAACCCT...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR GCA 72 bp GGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTaGTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: GTHCLLPLCPHH*CSTNAPPEEAE
Trigger: CTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCCTCCCTTTTCTGCTTaGAGGGTTTCCATACATTGC +
Preference number: 3 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHPPFSA*RVSIHC
Trigger: GCAATGTATGGAAACCCTCAAAGCAGAAAAGGGAGG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CAA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGAGGGTTTCCATACATaGCTGTTTTCAGGTTCTACA +
Preference number: 3 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAEGFHT*LFSGST
Trigger: TGTAGAACCTGAAAACAGCAATGTATGGAAACCCTC...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR GCA 72 bp ATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTaGTCCCTCTGTGTCCTCATCACTGCTGTTCTACTA +
Preference number: 3 (lower is better)
Translates to: MQMVTEIVVPTV*SLCVLITAVLL
Trigger: TAGTAGAACAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACGAGGGTTTCCATACATaGCTGTTTTCAGGTTCTACA +
Preference number: 3 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHEGFHT*LFSGST
Trigger: TGTAGAACCTGAAAACAGCAATGTATGGAAACCCTC...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CAA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTAGTCATTTCAGAGCCCTaGCTAAGTCACATGCAAATG +
Preference number: 3 (lower is better)
Translates to: ALETCSINNQMLAAGESVVISEP*LSHMQM
Trigger: CATTTGCATGTGACTTAGCAAGGGCTCTGAAATGAC...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
3UTR-3UTR CAA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACTGGTGCTCGTTCTCTTaGTCATTTCAGAGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYWCSFS*SFQSPC
Trigger: GCAAGGGCTCTGAAATGACAAAGAGAACGAGCACCA...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CAA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAAGAGGGTTTCCATACATaGCTGTTTTCAGGTTCTACA +
Preference number: 3 (lower is better)
Translates to: PEEAELRQDYQFWSFIREEGFHT*LFSGST
Trigger: TGTAGAACCTGAAAACAGCAATGTATGGAAACCCTC...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTCCTCCCTTTTCTGCTTaGAGGGTTTCCATACATTGC +
Preference number: 3 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSPPFSA*RVSIHC
Trigger: GCAATGTATGGAAACCCTCAAAGCAGAAAAGGGAGG...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTGTCATTTCAGAGCCCTaGCTAAGTCACATGCAAATG +
Preference number: 3 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSVISEP*LSHMQM
Trigger: CATTTGCATGTGACTTAGCAAGGGCTCTGAAATGAC...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR CCA 72 bp GTTTTTATTAGGTGGAAAGTTGGTACCTCAAAGCTTTaGAAACTTGCTCTATCAACAATCAGATGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: VFIRWKVGTSKL*KLALSTIRCLL
Trigger: CAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGCTTTGAGGTACCAACTTTCCACCTAATAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR TCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCCGGAACCGCCAAACTaGACTGCGCGCCGGACCGGC +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHPEPPN*TARRTG
Trigger: GCCGGTCCGGCGCGCAGTTCAGTTTGGCGGTTCCGG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGACCGCCAAACTGAACTaGGCGCCGGACCGGCGACGT +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELTAKLN*APDRRR
Trigger: ACGTCGCCGGTCCGGCGCGCAGTTCAGTTTGGCGGT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGTGGTTACGGAGATCGTaGTACCCACTGTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLWLRRS*YPLSAP
Trigger: GGGAGCAGACAGTGGGTACCACGATCTCCGTAACCA...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTATAAAAGTCCTCTGCTaGGCAGTTCAGCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAIKVLC*AVQPLP
Trigger: TGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTAT...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGGTTACGGAGATCGTaGTACCCACTGTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHWLRRS*YPLSAP
Trigger: GGGAGCAGACAGTGGGTACCACGATCTCCGTAACCA...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGGCTCGAGCCATTCAGTaGCACCAGTCCTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELARAIQ*HQSSNH
Trigger: ATGGTTTGAGGACTGGTGTCACTGAATGGCTCGAGC...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCAGATGGTCTATGGGTaGGCTGTCACTCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHQMVYG*AVTQLP
Trigger: TGGCAACTGAGTGACAGCTCACCCATAGACCATCTG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGTCAGCACACTTCACTTaGAATGCACCTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELSAHFT*NAPGCR
Trigger: CCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGA...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGCCGCCGGGACTATTTTaGCCACCCCCTACAATAAGT +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELPPGLF*PPPTIS
Trigger: ACTTATTGTAGGGGGTGGTCAAAATAGTCCCGGCGG...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACATAAAAGTCCTCTGCTaGGCAGTTCAGCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHIKVLC*AVQPLP
Trigger: TGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTAT...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGTTGGTTGGCCTTTGCTaGTCAACTGCACTTGGACAT +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLLVGLC*STALGH
Trigger: ATGTCCAAGTGCAGTTGATCAGCAAAGGCCAACCAA...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR TCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGCTCGAGCCATTCAGTaGCACCAGTCCTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCARAIQ*HQSSNH
Trigger: ATGGTTTGAGGACTGGTGTCACTGAATGGCTCGAGC...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTATAAAAGTCCTCTGCTaGGCAGTTCAGCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCIKVLC*AVQPLP
Trigger: TGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTAT...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGGACGGAACGATCGACTaGAGCAGTGTCATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELDGTID*SSVMLQ
Trigger: TTGAAGCATGACACTGCTGCAGTCGATCGTTCCGTC...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTTCCACTATGGAGCCATaGCTGTATATCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITASTMEP*LYITTL
Trigger: CAACGTGGTGATATACAGCCATGGCTCCATAGTGGA...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGAGTACCTTCAGGATCTaGACTGTCACATCTTACCCA +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLSTFRI*TVTSYP
Trigger: TGGGTAAGATGTGACAGTTCAGATCCTGAAGGTACT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTCAGTTTGTGATGCTGTaGTTGTATCATCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAQFVML*LYHPRQ
Trigger: CTGCCTTGGATGATACAATCACAGCATCACAAACTG...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACGGTCTGACTGGCAGCTaGAAAATGTGTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHGLTGS*KMCCSS
Trigger: TGATGAGCAACACATTTTTCAGCTGCCAGTCAGACC...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTAGAATAAAAGTCCTCTaGTGCGCAGTTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCRIKVL*CAVQPL
Trigger: GAGCGGCTGAACTGCGCAGCAGAGGACTTTTATTCT...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTTCATCACTTTATCTCTaGAGGACACTGAAGGAGACG +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITASSLYL*RTLKET
Trigger: CGTCTCCTTCAGTGTCCTGCAGAGATAAAGTGATGA...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGAGCAGTTGGTCTGACTaGCAGCTGAAAAATGTGTTG +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLSSWSD*QLKNVL
Trigger: CAACACATTTTTCAGCTGCCAGTCAGACCAACTGCT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTCACTTGAAATGCACCTaGCTGCAGGTAACCATGTTA +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAHLKCT*LQVTML
Trigger: TAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTG...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACAGCGATCGCAGTTTGTaGTGCTGTGATTGTATCATC +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHSDRSL*CCDCII
Trigger: GATGATACAATCACAGCATCACAAACTGCGATCGCT...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTCCGGAACCGCCAAACTaGACTGCGCGCCGGACCGGC +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSPEPPN*TARRTG
Trigger: GCCGGTCCGGCGCGCAGTTCAGTTTGGCGGTTCCGG...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCCATCCCGCCCCAATGTaGGAGCGGTACCGGAACCGC +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVHPAPM*ERYRNR
Trigger: GCGGTTCCGGTACCGCTCTCACATTGGGGCGGGATG...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCACTACTGCTCATTTTaGACCACAGTTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHHYCSF*TTVAQQ
Trigger: TTGCTGAGCAACTGTGGTGCAAAATGAGCAGTAGTG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTCGTGAGGATGTCCAGTaGCTTATTTATCTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAREDVQ*LIYLSN
Trigger: GTTACTGAGATAAATAAGGCACTGGACATCCTCACG...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTTCAAAGGGTTTGGTTaGCCTTTGCTGATCAACTGC +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHFKGFG*PLLINC
Trigger: GCAGTTGATCAGCAAAGGCCAACCAAACCCTTTGAA...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGATTCAAAGGACCTCTaGGCTCTCCTGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCDSKDL*ALLIPL
Trigger: AAGTGGAATCAGGAGAGCCCAGAGGTCCTTTGAATC...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTAATTCAGATGGTCTATaGGTGAGCTGTCACTCAGTT +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITANSDGL*VSCHSV
Trigger: AACTGAGTGACAGCTCACCCATAGACCATCTGAATT...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTAGTACCTTCAGGATCTaGACTGTCACATCTTACCCA +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCSTFRI*TVTSYP
Trigger: TGGGTAAGATGTGACAGTTCAGATCCTGAAGGTACT...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTAGCGATCGCAGTTTGTaGTGCTGTGATTGTATCATC +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCSDRSL*CCDCII
Trigger: GATGATACAATCACAGCATCACAAACTGCGATCGCT...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGCACCAAGTCTTGGTATaGAATCACACTACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELHQVLV*NHTTAH
Trigger: ATGAGCAGTAGTGTGATTTCATACCAAGACTTGGTG...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTCACTACTGCTCATTTTaGACCACAGTTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCHYCSF*TTVAQQ
Trigger: TTGCTGAGCAACTGTGGTGCAAAATGAGCAGTAGTG...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCGTGAGGATGTCCAGTaGCTTATTTATCTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHREDVQ*LIYLSN
Trigger: GTTACTGAGATAAATAAGGCACTGGACATCCTCACG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTCTATCAACAATCAGATaGTTGCTGCAGGTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCLSTIR*LLQVSQ
Trigger: CTGACTCACCTGCAGCAAGCATCTGATTGTTGATAG...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGAGCCTCATAGAGAAATaGGTCTTTACGGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLSLIEK*VFTDSF
Trigger: AAAGGAATCCGTAAAGACCCATTTCTCTATGAGGCT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGAGGAAGGGCAGTAACTaGCAGATTAATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLRKGSN*QINLQM
Trigger: CATTTGAAGATTAATCTGCCAGTTACTGCCCTTCCT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTTTAAAGAGCTCATACTaGGCAAAGCCTTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITALKSSY*AKPLDV
Trigger: AACATCCAAAGGCTTTGCCCAGTATGAGCTCTTTAA...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTCACTTCACCAAGTCTTaGTATGAAATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAHFTKS*YEITLL
Trigger: CAGTAGTGTGATTTCATACCAAGACTTGGTGAAGTG...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGCACTTCACCAAGTCTTaGTATGAAATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLHFTKS*YEITLL
Trigger: CAGTAGTGTGATTTCATACCAAGACTTGGTGAAGTG...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGGAGAAACTGTGTCCATaGTTCCATGATAAGACTGAT +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLEKLCP*FHDKTD
Trigger: ATCAGTCTTATCATGGAACCATGGACACAGTTTCTC...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTTCTTTACAGCAGTTaGTCTGACTGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCVLYSS*SDWQLK
Trigger: TTTCAGCTGCCAGTCAGACCAACTGCTGTAAAGAAC...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGAATTCAGATGGTCTATaGGTGAGCTGTCACTCAGTT +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELNSDGL*VSCHSV
Trigger: AACTGAGTGACAGCTCACCCATAGACCATCTGAATT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTAAGAGGAGTTCATGTTaGGATTTAATGAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAKRSSC*DLMKGM
Trigger: CATGCCTTTCATTAAATCTCAACATGAACTCCTCTT...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTTGTGGCTTCTCACTTTaGTATAAGTTCTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: VTEIVVPTVCSLCVLITACGFSL*YKFFTA
Trigger: TGCTGTAAAGAACTTATATCAAAGTGAGAAGCCACA...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTCATCCCGCCCCAATGTaGGAGCGGTACCGGAACCGC +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSHPAPM*ERYRNR
Trigger: GCGGTTCCGGTACCGCTCTCACATTGGGGCGGGATG...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGACGCAGAACCACATGTaGAAAACAGAACTACATTAT +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLTQNHM*KTELHY
Trigger: ATAATGTAGTTCTGTTTTTCACATGTGGTTCTGCGT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGATTTTGCACCACAGTTaGTCAGCAAAATCAAGATCA +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLILHHS*SAKSRS
Trigger: TGATCTTGATTTTGCTGAGCAACTGTGGTGCAAAAT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGAGCTGTCACTCAGTTaGCAAACTGTCTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCELSLS*QTVLIF
Trigger: GAAGATTAAGACAGTTTGGCAACTGAGTGACAGCTC...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGTGTTCTCATTTGTGGTaGTCGTTCTCTTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLCSHLW*SFSLSF
Trigger: AAATGACAAAGAGAACGAGCACCACAAATGAGAACA...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTACCGCCAAACTGAACTaGGCGCCGGACCGGCGACGT +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSTAKLN*APDRRR
Trigger: ACGTCGCCGGTCCGGCGCGCAGTTCAGTTTGGCGGT...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGGAGAAACTGTGTCCATaGTTCCATGATAAGACTGAT +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELEKLCP*FHDKTD
Trigger: ATCAGTCTTATCATGGAACCATGGACACAGTTTCTC...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGCTACTGATGGAGCAATaGAGTATTCCAAATGATTCA +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELLLMEQ*SIPNDS
Trigger: TGAATCATTTGGAATACTTCATTGCTCCATCAGTAG...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGAAGAGGAGTTCATGTTaGGATTTAATGAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELKRSSC*DLMKGM
Trigger: CATGCCTTTCATTAAATCTCAACATGAACTCCTCTT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATTCAACAGCAGATTTTaGTTCCAGGGGCTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIREFNSRF*FQGLEP
Trigger: TGGCTCGAGCCCCTGGAAGCAAAATCTGCTGTTGAA...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGAGGGTTTCCATACATTaGTGTTTTCAGGTTCTACAA +
Preference number: 4 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELRVSIH*CFQVLQ
Trigger: TTGTAGAACCTGAAAACAGCAATGTATGGAAACCCT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGTTCTCATTTGTGGTaGTCGTTCTCTTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHCSHLW*SFSLSF
Trigger: AAATGACAAAGAGAACGAGCACCACAAATGAGAACA...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTTTAAAGAGCTCATACTaGGCAAAGCCTTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCLKSSY*AKPLDV
Trigger: AACATCCAAAGGCTTTGCCCAGTATGAGCTCTTTAA...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACCAGATGGTCTATGGGTaGGCTGTCACTCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYQMVYG*AVTQLP
Trigger: TGGCAACTGAGTGACAGCTCACCCATAGACCATCTG...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTATGAAATCACACTACTaGTCATTTTGCACCACAGTT +
Preference number: 4 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCMKSHY*SFCTTV
Trigger: AACTGTGGTGCAAAATGAGCAGTAGTGTGATTTCAT...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTAACACTTCACTTGAAATaGACCTGGCTGCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: ALETCSINNQMLAAGESVTLHLK*TWLQVT
Trigger: GGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGT...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR GCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAAACACTTCACTTGAAATaGACCTGGCTGCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIRETLHLK*TWLQVT
Trigger: GGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGT...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
3UTR CAA 72 bp TTTGTGGTGCTCGTTCTCTTTGTCATTTCAGAGCCCTaGCTAAGTCACATGCAAATGGTTACGGAGATCGTG +
Preference number: 4 (lower is better)
Translates to: FVVLVLFVISEP*LSHMQMVTEIV
Trigger: CACGATCTCCGTAACCATTTGCATGTGACTTAGCAAGGGCTCTGAAATGACAAAGAGAACGAGCACCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTACAGTTTGTGATGCTGTaGTTGTATCATCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALETCSINNQMLAAGESVQFVML*LYHPRQ
Trigger: CTGCCTTGGATGATACAATCACAGCATCACAAACTG...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR TCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTGCTCGAGCCATTCAGTaGCACCAGTCCTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIARAIQ*HQSSNH
Trigger: ATGGTTTGAGGACTGGTGTCACTGAATGGCTCGAGC...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCCAGATGGTCTATGGGTaGGCTGTCACTCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVQMVYG*AVTQLP
Trigger: TGGCAACTGAGTGACAGCTCACCCATAGACCATCTG...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCTCAGCACACTTCACTTaGAATGCACCTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVSAHFT*NAPGCR
Trigger: CCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGA...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCCCGCCGGGACTATTTTaGCCACCCCCTACAATAAGT +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVPPGLF*PPPTIS
Trigger: ACTTATTGTAGGGGGTGGTCAAAATAGTCCCGGCGG...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACTTCAACAGCAGATTTTaGTTCCAGGGGCTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYFNSRF*FQGLEP
Trigger: TGGCTCGAGCCCCTGGAAGCAAAATCTGCTGTTGAA...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGATTCAACAGCAGATTTTaGTTCCAGGGGCTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGFNSRF*FQGLEP
Trigger: TGGCTCGAGCCCCTGGAAGCAAAATCTGCTGTTGAA...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAGACGGAACGATCGACTaGAGCAGTGTCATGCTTCAA +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGDGTID*SSVMLQ
Trigger: TTGAAGCATGACACTGCTGCAGTCGATCGTTCCGTC...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAACTGTGTCCTCATCACTaGTGTTCTACTAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIRELCPHH*CSTNAP
Trigger: AGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCATCACTTTATCTCTaGAGGACACTGAAGGAGACG +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIRESSLYL*RTLKET
Trigger: CGTCTCCTTCAGTGTCCTGCAGAGATAAAGTGATGA...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTAGTTCTTTACAGCAGTTaGTCTGACTGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: ALETCSINNQMLAAGESVVLYSS*SDWQLK
Trigger: TTTCAGCTGCCAGTCAGACCAACTGCTGTAAAGAAC...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAACACTTGAAATGCACCTaGCTGCAGGTAACCATGTTA +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIREHLKCT*LQVTML
Trigger: TAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTG...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACGGTCTGACTGGCAGCTaGAAAATGTGTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYGLTGS*KMCCSS
Trigger: TGATGAGCAACACATTTTTCAGCTGCCAGTCAGACC...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTAGAATAAAAGTCCTCTaGTGCGCAGTTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIRIKVL*CAVQPL
Trigger: GAGCGGCTGAACTGCGCAGCAGAGGACTTTTATTCT...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAAGAGCTGTCACTCAGTTaGCAAACTGTCTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIREELSLS*QTVLIF
Trigger: GAAGATTAAGACAGTTTGGCAACTGAGTGACAGCTC...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAGATTCAAAGGACCTCTaGGCTCTCCTGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGDSKDL*ALLIPL
Trigger: AAGTGGAATCAGGAGAGCCCAGAGGTCCTTTGAATC...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACTCCACTATGGAGCCATaGCTGTATATCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYSTMEP*LYITTL
Trigger: CAACGTGGTGATATACAGCCATGGCTCCATAGTGGA...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGATCCACTATGGAGCCATaGCTGTATATCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGSTMEP*LYITTL
Trigger: CAACGTGGTGATATACAGCCATGGCTCCATAGTGGA...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGACAGTTTGTGATGCTGTaGTTGTATCATCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGQFVML*LYHPRQ
Trigger: CTGCCTTGGATGATACAATCACAGCATCACAAACTG...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTGGTCTGACTGGCAGCTaGAAAATGTGTTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIGLTGS*KMCCSS
Trigger: TGATGAGCAACACATTTTTCAGCTGCCAGTCAGACC...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCCCTTTGCTGATCAACTaGACTTGGACATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVPLLIN*TWTSAS
Trigger: TGAGGCTGATGTCCAAGTGCAGTTGATCAGCAAAGG...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR GCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTCCTTTGCTGATCAACTaGACTTGGACATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIPLLIN*TWTSAS
Trigger: TGAGGCTGATGTCCAAGTGCAGTTGATCAGCAAAGG...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR GCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACCACTACTGCTCATTTTaGACCACAGTTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYHYCSF*TTVAQQ
Trigger: TTGCTGAGCAACTGTGGTGCAAAATGAGCAGTAGTG...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTACACTTCACTTGAAATaGACCTGGCTGCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFITLHLK*TWLQVT
Trigger: GGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGT...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTAGCCAATAAAGCAACATaGAATCCCCCTCAACAAATT +
Preference number: 4 (lower is better)
Translates to: ALETCSINNQMLAAGESVANKAT*NPPQQI
Trigger: AATTTGTTGAGGGGGATTGCATGTTGCTTTATTGGC...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCGATTCAAAGGACCTCTaGGCTCTCCTGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVDSKDL*ALLIPL
Trigger: AAGTGGAATCAGGAGAGCCCAGAGGTCCTTTGAATC...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAAGAGAAACTGTGTCCATaGTTCCATGATAAGACTGAT +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIREEKLCP*FHDKTD
Trigger: ATCAGTCTTATCATGGAACCATGGACACAGTTTCTC...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAACAAAAGCATTTGAACTaGAATAGTCCCACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIREQKHLN*NSPTER
Trigger: TCTCTCAGTGGGACTATTCCAGTTCAAATGCTTTTG...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAGTTCTTTACAGCAGTTaGTCTGACTGGCAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGVLYSS*SDWQLK
Trigger: TTTCAGCTGCCAGTCAGACCAACTGCTGTAAAGAAC...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCAGCGATCGCAGTTTGTaGTGCTGTGATTGTATCATC +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVSDRSL*CCDCII
Trigger: GATGATACAATCACAGCATCACAAACTGCGATCGCT...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGACACCAAGTCTTGGTATaGAATCACACTACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGHQVLV*NHTTAH
Trigger: ATGAGCAGTAGTGTGATTTCATACCAAGACTTGGTG...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCCTGAGGAGGCAGAGCTaGGACAGGATTATCAATTTT +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVLRRQS*DRIINF
Trigger: AAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAG...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTCTGAGGAGGCAGAGCTaGGACAGGATTATCAATTTT +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFILRRQS*DRIINF
Trigger: AAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAG...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAAAAATGTGGCTCTACTTaGAGTCAATCTTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIREKCGST*SQSSKT
Trigger: AGTTTTGGAAGATTGACTTCAAGTAGAGCCACATTT...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR TCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACGATGCTTGCTGCAGGTaGGTCAGTATATTTCAATGT +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYDACCR*VSIFQC
Trigger: ACATTGAAATATACTGACTCACCTGCAGCAAGCATC...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR GCA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTAATTTTGCACCACAGTTaGTCAGCAAAATCAAGATCA +
Preference number: 4 (lower is better)
Translates to: ALETCSINNQMLAAGESVILHHS*SAKSRS
Trigger: TGATCTTGATTTTGCTGAGCAACTGTGGTGCAAAAT...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR GCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACGAGCTGTCACTCAGTTaGCAAACTGTCTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYELSLS*QTVLIF
Trigger: GAAGATTAAGACAGTTTGGCAACTGAGTGACAGCTC...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCCTGTGTCCTCATCACTaGTGTTCTACTAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVLCPHH*CSTNAP
Trigger: AGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATGTTCTCATTTGTGGTaGTCGTTCTCTTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: PEEAELRQDYQFWSFIRECSHLW*SFSLSF
Trigger: AAATGACAAAGAGAACGAGCACCACAAATGAGAACA...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCTTCAAAGGGTTTGGTTaGCCTTTGCTGATCAACTGC +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVFKGFG*PLLINC
Trigger: GCAGTTGATCAGCAAAGGCCAACCAAACCCTTTGAA...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTAATAAGAGCAGTGGTTaGGGAGAAGATACCTCGACT +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFINKSSG*GEDTST
Trigger: AGTCGAGGTATCTTCTCCCCAACCACTGCTCTTATT...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613446.4
CDS-3UTR TCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTTTGGTTGGCCTTTGCTaGTCAACTGCACTTGGACAT +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSLVGLC*STALGH
Trigger: ATGTCCAAGTGCAGTTGATCAGCAAAGGCCAACCAA...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR TCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTCACCAAGTCTTGGTATaGAATCACACTACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIHQVLV*NHTTAH
Trigger: ATGAGCAGTAGTGTGATTTCATACCAAGACTTGGTG...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTTCTTCCTCCCTTTTCTaGTTTGAGGGTTTCCATACA +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFISSSLF*FEGFHT
Trigger: TGTATGGAAACCCTCAAAGCAGAAAAGGGAGGAAGA...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAGCCAATAAAGCAACATaGAATCCCCCTCAACAAATT +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGANKAT*NPPQQI
Trigger: AATTTGTTGAGGGGGATTGCATGTTGCTTTATTGGC...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAAGCCTCATAGAGAAATaGGTCTTTACGGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGSLIEK*VFTDSF
Trigger: AAAGGAATCCGTAAAGACCCATTTCTCTATGAGGCT...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGACAAAAGCATTTGAACTaGAATAGTCCCACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGQKHLN*NSPTER
Trigger: TCTCTCAGTGGGACTATTCCAGTTCAAATGCTTTTG...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCAATTCAGATGGTCTATaGGTGAGCTGTCACTCAGTT +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVNSDGL*VSCHSV
Trigger: AACTGAGTGACAGCTCACCCATAGACCATCTGAATT...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACAGGCTCATAGAGAAATaGGTCTTTACGGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYRLIEK*VFTDSF
Trigger: AAAGGAATCCGTAAAGACCCATTTCTCTATGAGCCT...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613446.4
CDS-3UTR TCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTAGTACCTTCAGGATCTaGACTGTCACATCTTACCCA +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSSTFRI*TVTSYP
Trigger: TGGGTAAGATGTGACAGTTCAGATCCTGAAGGTACT...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACCTACTGATGGAGCAATaGAGTATTCCAAATGATTCA +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYLLMEQ*SIPNDS
Trigger: TGAATCATTTGGAATACTTCATTGCTCCATCAGTAG...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAGGAATGTTTAAGTCATaGGATATAGCCAGGAACAAA +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGGMFKS*DIARNK
Trigger: TTTGTTCCTGGCTATATCTCATGACTTAAACATTCC...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR GCA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACATTTTGCACCACAGTTaGTCAGCAAAATCAAGATCA +
Preference number: 4 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYILHHS*SAKSRS
Trigger: TGATCTTGATTTTGCTGAGCAACTGTGGTGCAAAAT...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAATGAAATCACACTACTaGTCATTTTGCACCACAGTT +
Preference number: 4 (lower is better)
Translates to: AELRQDYQFWSFIRESSGMKSHY*SFCTTV
Trigger: AACTGTGGTGCAAAATGAGCAGTAGTGTGATTTCAT...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTGCCAATAAAGCAACATaGAATCCCCCTCAACAAATT +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIANKAT*NPPQQI
Trigger: AATTTGTTGAGGGGGATTGCATGTTGCTTTATTGGC...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTCACTTCACCAAGTCTTaGTATGAAATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIHFTKS*YEITLL
Trigger: CAGTAGTGTGATTTCATACCAAGACTTGGTGAAGTG...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTCAAAAGCATTTGAACTaGAATAGTCCCACTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIQKHLN*NSPTER
Trigger: TCTCTCAGTGGGACTATTCCAGTTCAAATGCTTTTG...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTAGCAGTTGGTCTGACTaGCAGCTGAAAAATGTGTTG +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSSSWSD*QLKNVL
Trigger: CAACACATTTTTCAGCTGCCAGTCAGACCAACTGCT...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTCACTTGAAATGCACCTaGCTGCAGGTAACCATGTTA +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSHLKCT*LQVTML
Trigger: TAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTG...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCGGTACCTCAAAGCTTTaGAAACTTGCTCTATCAACA +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVGTSKL*KLALST
Trigger: TGTTGATAGAGCAAGTTTCCAAAGCTTTGAGGTACC...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307897.10
3UTR CAA 72 bp AAGCTTTGGAAACTTGCTCTATCAACAATCAGATGCTaGCTGCAGGTGAGTCAGTATATTTCAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KLWKLALSTIRC*LQVSQYISMFS
Trigger: GGAAAACATTGAAATATACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCCTACTGATGGAGCAATaGAGTATTCCAAATGATTCA +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVLLMEQ*SIPNDS
Trigger: TGAATCATTTGGAATACTTCATTGCTCCATCAGTAG...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCAAGAGGAGTTCATGTTaGGATTTAATGAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVKRSSC*DLMKGM
Trigger: CATGCCTTTCATTAAATCTCAACATGAACTCCTCTT...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCTGTGGCTTCTCACTTTaGTATAAGTTCTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVCGFSL*YKFFTA
Trigger: TGCTGTAAAGAACTTATATCAAAGTGAGAAGCCACA...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCACGCAGAACCACATGTaGAAAACAGAACTACATTAT +
Preference number: 4 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVTQNHM*KTELHY
Trigger: ATAATGTAGTTCTGTTTTTCACATGTGGTTCTGCGT...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR TCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTTGTGGCTTCTCACTTTaGTATAAGTTCTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSCGFSL*YKFFTA
Trigger: TGCTGTAAAGAACTTATATCAAAGTGAGAAGCCACA...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR GCA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTATGAAATCACACTACTaGTCATTTTGCACCACAGTT +
Preference number: 4 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSMKSHY*SFCTTV
Trigger: AACTGTGGTGCAAAATGAGCAGTAGTGTGATTTCAT...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS TCA 90 bp GTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTaGGAGCGGTACCGGAACCGCCAAACTGAACTGCGCGCCGGACCG +
Preference number: 5 (lower is better)
Translates to: VLCCAVQPLPHPAPM*ERYRNRQTELRAGP
Trigger: CGGTCCGGCGCGCAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATTGGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446801.6
ENST00000535141.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGTTCAACAGCAGATTTaGCTTCCAGGGGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAVQQQI*LPGARA
Trigger: GGCTCGAGCCCCTGGAAGCAAAATCTGCTGTTGAAC...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGGGGTTTGGTTGGCCTTaGCTGATCAACTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLGFGWP*LINCTW
Trigger: CCAAGTGCAGTTGATCAGCAAAGGCCAACCAAACCC...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACGGGTTTGGTTGGCCTTaGCTGATCAACTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHGFGWP*LINCTW
Trigger: CCAAGTGCAGTTGATCAGCAAAGGCCAACCAAACCC...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CAA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGTGGTGCTCGTTCTCTTaGTCATTTCAGAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLWCSFS*SFQSPC
Trigger: GCAAGGGCTCTGAAATGACAAAGAGAACGAGCACCA...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTCCCGCCGGGACTATTTaGACCACCCCCTACAATAAG +
Preference number: 5 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCPAGTI*TTPYNK
Trigger: CTTATTGTAGGGGGTGGTCAAAATAGTCCCGGCGGG...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGGTCCAATTAACTGCCTaGCCTTCCCAACTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLVQLTA*PSQLVK
Trigger: CTTTACCAGTTGGGAAGGCAAGGCAGTTAATTGGAC...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGTGGTGCTCGTTCTCTTaGTCATTTCAGAGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELWCSFS*SFQSPC
Trigger: GCAAGGGCTCTGAAATGACAAAGAGAACGAGCACCA...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGTACTGGGCAAAGCCTTaGGATGTTACAGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLYWAKP*DVTVDK
Trigger: CTTGTCTACTGTAACATCCAAAGGCTTTGCCCAGTA...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGACACTACTGCTCATTTaGCACCACAGTTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELTLLLI*HHSCSA
Trigger: TGCTGAGCAACTGTGGTGCAAAATGAGCAGTAGTGT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACACACTACTGCTCATTTaGCACCACAGTTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHTLLLI*HHSCSA
Trigger: TGCTGAGCAACTGTGGTGCAAAATGAGCAGTAGTGT...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTACTTTGAAAAGACGCTaGACGGAACGATCGACTGCA +
Preference number: 5 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCTLKRR*TERSTA
Trigger: TGCAGTCGATCGTTCCGTCAAGCGTCTTTTCAAAGT...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGAGATCACTCCGAACTTaGAAAAGACGCTTGACGGAA +
Preference number: 5 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELRSLRT*KRRLTE
Trigger: TTCCGTCAAGCGTCTTTTCAAAGTTCGGAGTGATCT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTCCTCCCTTTTCTGCTTaGAGGGTTTCCATACATTGC +
Preference number: 5 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCPPFSA*RVSIHC
Trigger: GCAATGTATGGAAACCCTCAAAGCAGAAAAGGGAGG...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACGTCATTTCAGAGCCCTaGCTAAGTCACATGCAAATG +
Preference number: 5 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHVISEP*LSHMQM
Trigger: CATTTGCATGTGACTTAGCAAGGGCTCTGAAATGAC...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGGTCATTTCAGAGCCCTaGCTAAGTCACATGCAAATG +
Preference number: 5 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELVISEP*LSHMQM
Trigger: CATTTGCATGTGACTTAGCAAGGGCTCTGAAATGAC...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGTGGTACCTCAAAGCTTaGGAAACTTGCTCTATCAAC +
Preference number: 5 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLWYLKA*ETCSIN
Trigger: GTTGATAGAGCAAGTTTCCAAAGCTTTGAGGTACCA...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CAA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTTTTCAAAGGGTTTGGTaGGCCTTTGCTGATCAACTG +
Preference number: 5 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCFQRVW*AFADQL
Trigger: CAGTTGATCAGCAAAGGCCAACCAAACCCTTTGAAA...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CAA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAAGTTCAACAGCAGATTTaGCTTCCAGGGGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: PEEAELRQDYQFWSFIREVQQQI*LPGARA
Trigger: GGCTCGAGCCCCTGGAAGCAAAATCTGCTGTTGAAC...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTCAGCTGAAAAATGTGTaGCTCATCAAGAGGATTTTG +
Preference number: 5 (lower is better)
Translates to: VTEIVVPTVCSLCVLITAQLKNV*LIKRIL
Trigger: CAAAATCCTCTTGATGAGCAACACATTTTTCAGCTG...AGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AGTCACATGCAAATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCATTTCAGAGCCCTaGCTAAGTCACATGCAAATG +
Preference number: 5 (lower is better)
Translates to: SHMQMVTEIVVPTVCSLCVISEP*LSHMQM
Trigger: CATTTGCATGTGACTTAGCAAGGGCTCTGAAATGAC...ACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACTGCTGATTCCTGTAATGCTGTaGTTTGTTGTGATAAGCTCA +
Preference number: 5 (lower is better)
Translates to: LRRSWYPLSAPSVSSSLLIPVML*FVVISS
Trigger: TGAGCTTATCACAACAAACAACAGCATTACAGGAAT...CAGCAGTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGAATATGGTGGAGTTTTaGGACACGATAAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELNMVEF*DTINLF
Trigger: GAACAGGTTTATCGTGTCCAAAAACTCCACCATATT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACAATATGGTGGAGTTTTaGGACACGATAAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHNMVEF*DTINLF
Trigger: GAACAGGTTTATCGTGTCCAAAAACTCCACCATATT...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACCAGCTGAAAAATGTGTaGCTCATCAAGAGGATTTTG +
Preference number: 5 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHQLKNV*LIKRIL
Trigger: CAAAATCCTCTTGATGAGCAACACATTTTTCAGCTG...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS TCA 90 bp CTCATCCACAGGACTCCAGGAAATATCCAAAGCGATCGCAGTTTGTaGTGCTGTGATTGTATCATCCAAGGCAGAGGACTTAAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: LIHRTPGNIQSDRSL*CCDCIIQGRGLKEL
Trigger: GAGCTCTTTAAGTCCTCTGCCTTGGATGATACAATCACAGCATCACAAACTGCGATCGCTTTGGATATTTCCTGGAGTCCTGTGGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000561583.5
ENST00000565627.5
ENST00000613446.4
CDS-3UTR CAA 90 bp CTGTGTCCTCATCACTGCTGTTCTACTAATGCTCCTCCTGAGGAGGCAGAGCTGATTCCTGTAATGCTGTaGTTTGTTGTGATAAGCTCA +
Preference number: 5 (lower is better)
Translates to: LCPHHCCSTNAPPEEAELIPVML*FVVISS
Trigger: TGAGCTTATCACAACAAACAACAGCATTACAGGAAT...CAGCTCTGCCTCCTCAGGAGGAGCATTAGTAGAACAGCAGTGATGAGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp AATGGTTACGGAGATCGTGGTACCCACTGTCTGCTCCCTCTGTGTCCTCATCACATTCCTGTAATGCTGTaGTTTGTTGTGATAAGCTCA +
Preference number: 5 (lower is better)
Translates to: NGYGDRGTHCLLPLCPHHIPVML*FVVISS
Trigger: TGAGCTTATCACAACAAACAACAGCATTACAGGAAT...GTGATGAGGACACAGAGGGAGCAGACAGTGGGTACCACGATCTCCGTAACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTAATCAGCACACTTCACTaGAAATGCACCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ALETCSINNQMLAAGESVISTLH*KCTWLQ
Trigger: CTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGAT...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CAA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCGTTCAACAGCAGATTTaGCTTCCAGGGGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVVQQQI*LPGARA
Trigger: GGCTCGAGCCCCTGGAAGCAAAATCTGCTGTTGAAC...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTATTTCAAAGGGTTTGGTaGGCCTTTGCTGATCAACTG +
Preference number: 5 (lower is better)
Translates to: ALETCSINNQMLAAGESVFQRVW*AFADQL
Trigger: CAGTTGATCAGCAAAGGCCAACCAAACCCTTTGAAA...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CAA 90 bp GCTTTGGAAACTTGCTCTATCAACAATCAGATGCTTGCTGCAGGTGAGTCAGTATACTGGGCAAAGCCTTaGGATGTTACAGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: ALETCSINNQMLAAGESVYWAKP*DVTVDK
Trigger: CTTGTCTACTGTAACATCCAAAGGCTTTGCCCAGTA...TACTGACTCACCTGCAGCAAGCATCTGATTGTTGATAGAGCAAGTTTCCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CAA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATACTGGGCAAAGCCTTaGGATGTTACAGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: PEEAELRQDYQFWSFIREYWAKP*DVTVDK
Trigger: CTTGTCTACTGTAACATCCAAAGGCTTTGCCCAGTA...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS CCA 90 bp CTTCCACTATGGAGCCATGGCTGTATATCACCACGTTGTAGACTCTaGATGATCAATGTGAAACACTTCACCAAGTCTTGGTATGAAATC +
Preference number: 5 (lower is better)
Translates to: LPLWSHGCISPRCRL*MINVKHFTKSWYEI
Trigger: GATTTCATACCAAGACTTGGTGAAGTGTTTCACATTGATCATCCAGAGTCTACAACGTGGTGATATACAGCCATGGCTCCATAGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000613446.4
CDS CCA 90 bp GTGCTTATAGAGGACTTCATCAGCACACTTCACTTGAAATGCACCTaGCTGCAGGTAACCATGTTAGTAAAGAATATCCTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: VLIEDFISTLHLKCT*LQVTMLVKNILSSR
Trigger: CCTGGAAGAAAGGATATTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000613446.4
CDS CCA 90 bp AGCCTTATAGAGGACTTCATCAGCACACTTCACTTGAAATGCACCTaGCTGCAGGTAACCATGTTAGTAAAGAATATCCTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLIEDFISTLHLKCT*LQVTMLVKNILSSR
Trigger: CCTGGAAGAAAGGATATTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567816.1
CDS-3UTR CAA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTGCTGATCAACTGCACTaGGACATCAGCCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIADQLH*DISLIE
Trigger: CTCTATGAGGCTGATGTCCAAGTGCAGTTGATCAGC...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307897.10
ENST00000446801.6
CDS-3UTR CAA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAAGAGAGTGGAGGGATTaGAAGAATCTCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: AELRQDYQFWSFIRESSGREWRD*KNLIHR
Trigger: CCTGTGGATGAGATTCTTCAAATCCCTCCACTCTCT...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAACTTTGAAAAGACGCTaGACGGAACGATCGACTGCA +
Preference number: 5 (lower is better)
Translates to: AELRQDYQFWSFIRESSGTLKRR*TERSTA
Trigger: TGCAGTCGATCGTTCCGTCAAGCGTCTTTTCAAAGT...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTATCAGCACACTTCACTaGAAATGCACCTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIISTLH*KCTWLQ
Trigger: CTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGAT...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACCCTCCCTTTTCTGCTTaGAGGGTTTCCATACATTGC +
Preference number: 5 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYPPFSA*RVSIHC
Trigger: GCAATGTATGGAAACCCTCAAAGCAGAAAAGGGAGG...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTCCCGCCGGGACTATTTaGACCACCCCCTACAATAAG +
Preference number: 5 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSPAGTI*TTPYNK
Trigger: CTTATTGTAGGGGGTGGTCAAAATAGTCCCGGCGGG...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000446801.6
ENST00000613446.4
CDS CCA 90 bp TACCTTATAGAGGACTTCATCAGCACACTTCACTTGAAATGCACCTaGCTGCAGGTAACCATGTTAGTAAAGAATATCCTTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: YLIEDFISTLHLKCT*LQVTMLVKNILSSR
Trigger: CCTGGAAGAAAGGATATTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569489.1
CDS-3UTR CAA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTGTCCAATTAACTGCCTaGCCTTCCCAACTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIVQLTA*PSQLVK
Trigger: CTTTACCAGTTGGGAAGGCAAGGCAGTTAATTGGAC...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTAGAGAGTGGAGGGATTaGAAGAATCTCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFIREWRD*KNLIHR
Trigger: CCTGTGGATGAGATTCTTCAAATCCCTCCACTCTCT...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GTACCCAGCACACAAGATAAAAGTGGGTATTACCTAAGTGGCCACTATTTTATTACTTTGAAAAGACGCTaGACGGAACGATCGACTGCA +
Preference number: 5 (lower is better)
Translates to: VPSTQDKSGYYLSGHYFITLKRR*TERSTA
Trigger: TGCAGTCGATCGTTCCGTCAAGCGTCTTTTCAAAGT...AATAAAATAGTGGCCACTTAGGTAATACCCACTTTTATCTTGTGTGCTGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATCTTCAGGAAGATCACTCCGAACTTaGAAAAGACGCTTGACGGAA +
Preference number: 5 (lower is better)
Translates to: AELRQDYQFWSFIRESSGRSLRT*KRRLTE
Trigger: TTCCGTCAAGCGTCTTTTCAAAGTTCGGAGTGATCT...TCCTGAAGATTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GCTGTATTTACTAAAATGATCCTGTTCTCATTTGTGGTGCTCGTTCTCTTTGTCTTTGTTATAGTGGGCTaGGGCAAGGAGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: AVFTKMILFSFVVLVLFVFVIVG*GKERKS
Trigger: GCTTTTCCTCTCCTTGCCCAAGCCCACTATAACAAA...GACAAAGAGAACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CAA 90 bp CCTGAGGAGGCAGAGCTGAGACAGGATTATCAATTTTGGAGCTTCATAAGAGAATTATTAGGTGGAAAGTaGGTACCTCAAAGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: PEEAELRQDYQFWSFIRELLGGK*VPQSFG
Trigger: TCCAAAGCTTTGAGGTACCAACTTTCCACCTAATAA...TTCTCTTATGAAGCTCCAAAATTGATAATCCTGTCTCAGCTCTGCCTCCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CAA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACGAGGGTTTCCATACATaGCTGTTTTCAGGTTCTACA +
Preference number: 5 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYEGFHT*LFSGST
Trigger: TGTAGAACCTGAAAACAGCAATGTATGGAAACCCTC...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTGTCCAATTAACTGCCTaGCCTTCCCAACTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSVQLTA*PSQLVK
Trigger: CTTTACCAGTTGGGAAGGCAAGGCAGTTAATTGGAC...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTAGAGAGTGGAGGGATTaGAAGAATCTCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSREWRD*KNLIHR
Trigger: CCTGTGGATGAGATTCTTCAAATCCCTCCACTCTCT...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp GGTAGCAAAGATGGAAGGTGCGAGACCAAATCTTACCAAACTAGCTATTTTTACCAAAGCTTTGGAAACTaGCTCTATCAACAATCAGAT +
Preference number: 5 (lower is better)
Translates to: GSKDGRCETKSYQTSYFYQSFGN*LYQQSD
Trigger: ATCTGATTGTTGATAGAGCAAGTTTCCAAAGCTTTG...GTAAAAATAGCTAGTTTGGTAAGATTTGGTCTCGCACCTTCCATCTTTGCTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTGAGGGTTTCCATACATaGCTGTTTTCAGGTTCTACA +
Preference number: 5 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSEGFHT*LFSGST
Trigger: TGTAGAACCTGAAAACAGCAATGTATGGAAACCCTC...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTCAGCTGAAAAATGTGTaGCTCATCAAGAGGATTTTG +
Preference number: 5 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSQLKNV*LIKRIL
Trigger: CAAAATCCTCTTGATGAGCAACACATTTTTCAGCTG...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000613446.4
CDS-3UTR CAA 90 bp TTTCTCCATAAGGGCAATCAGAGAAATATGCTTTCCTTTTTAACAAGCTCATCTAAAATGTGGCTCTACTaGAAGTCAATCTTCCAAAAC +
Preference number: 5 (lower is better)
Translates to: FLHKGNQRNMLSFLTSSSKMWLY*KSIFQN
Trigger: GTTTTGGAAGATTGACTTCAAGTAGAGCCACATTTT...AGATGAGCTTGTTAAAAAGGAAAGCATATTTCTCTGATTGCCCTTATGGAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS TCA 72 bp CGCCCCAATGTGAGAGCGGTACCGGAACCGCCAAACTaGACTGCGCGCCGGACCGGCGACGTCAGGGGTCAT +
Preference number: 6 (lower is better)
Translates to: RPNVRAVPEPPN*TARRTGDVRGH
Trigger: ATGACCCCTGACGTCGCCGGTCCGGCGCGCAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATTGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000446801.6
ENST00000535141.6
ENST00000613446.4
CDS GCA 72 bp CAATGTGAGAGCGGTACCGGAACCGCCAAACTGAACTaGGCGCCGGACCGGCGACGTCAGGGGTCATGGCCC +
Preference number: 6 (lower is better)
Translates to: QCESGTGTAKLN*APDRRRQGSWP
Trigger: GGGCCATGACCCCTGACGTCGCCGGTCCGGCGCGCAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446801.6
ENST00000535141.6
ENST00000613446.4
CDS TCA 72 bp TGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTaGGAGCGGTACCGGAACCGCCAAACTGAACTGCGC +
Preference number: 6 (lower is better)
Translates to: CAVQPLPHPAPM*ERYRNRQTELR
Trigger: GCGCAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATTGGGGCGGGATGTGGGAGCGGCTGAACTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446801.6
ENST00000535141.6
ENST00000613446.4
CDS GCA 72 bp TGCAGGACACTGAAGGAGACGAGAATAAAAGTCCTCTaGTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCA +
Preference number: 6 (lower is better)
Translates to: CRTLKETRIKVL*CAVQPLPHPAP
Trigger: TGGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTATTCTCGTCTCCTTCAGTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000446801.6
ENST00000563698.5
ENST00000564309.5
ENST00000565627.5
ENST00000565960.1
ENST00000613446.4
CDS GCA 72 bp GGACATCAGCTGAAGGAGACGAGAATAAAAGTCCTCTaGTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCA +
Preference number: 6 (lower is better)
Translates to: GHQLKETRIKVL*CAVQPLPHPAP
Trigger: TGGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTATTCTCGTCTCCTTCAGCTGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535141.6
ENST00000564179.5
CDS GCA 72 bp TTAGACTCACTGAAGGAGACGAGAATAAAAGTCCTCTaGTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCA +
Preference number: 6 (lower is better)
Translates to: LDSLKETRIKVL*CAVQPLPHPAP
Trigger: TGGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTATTCTCGTCTCCTTCAGTGAGTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567926.5
CDS GCA 72 bp ATTAAATTTCTGAAGGAGACGAGAATAAAAGTCCTCTaGTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCA +
Preference number: 6 (lower is better)
Translates to: IKFLKETRIKVL*CAVQPLPHPAP
Trigger: TGGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTATTCTCGTCTCCTTCAGAAATTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307897.10
CDS GCA 72 bp CCGAACTTTGAAAAGACGCTTGACGGAACGATCGACTaGAGCAGTGTCATGCTTCAAGGTCTCAACCTCAGT +
Preference number: 6 (lower is better)
Translates to: PNFEKTLDGTID*SSVMLQGLNLS
Trigger: ACTGAGGTTGAGACCTTGAAGCATGACACTGCTGCAGTCGATCGTTCCGTCAAGCGTCTTTTCAAAGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000561583.5
ENST00000565627.5
ENST00000613446.4
CDS CAA 90 bp AGTTGCTCAGCAAAATCAAGATCACTCCGAACTTTGAAAAGACGCTaGACGGAACGATCGACTGCAGCAGTGTCATGCTTCAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: SCSAKSRSLRTLKRR*TERSTAAVSCFKVS
Trigger: TGAGACCTTGAAGCATGACACTGCTGCAGTCGATCGTTCCGTCAAGCGTCTTTTCAAAGTTCGGAGTGATCTTGATTTTGCTGAGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000613446.4
CDS CAA 72 bp GCAAAATCAAGATCACTCCGAACTTTGAAAAGACGCTaGACGGAACGATCGACTGCAGCAGTGTCATGCTTC +
Preference number: 6 (lower is better)
Translates to: AKSRSLRTLKRR*TERSTAAVSCF
Trigger: GAAGCATGACACTGCTGCAGTCGATCGTTCCGTCAAGCGTCTTTTCAAAGTTCGGAGTGATCTTGATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000561583.5
ENST00000565627.5
ENST00000613446.4
CDS CAA 72 bp CACAGTTGCTCAGCAAAATCAAGATCACTCCGAACTTaGAAAAGACGCTTGACGGAACGATCGACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: HSCSAKSRSLRT*KRRLTERSTAA
Trigger: TGCTGCAGTCGATCGTTCCGTCAAGCGTCTTTTCAAAGTTCGGAGTGATCTTGATTTTGCTGAGCAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000613446.4
CDS CAA 72 bp CAAAGGGTTTGGTTGGCCTTTGCTGATCAACTGCACTaGGACATCAGCCTGTTAAAACAGGTATCGAGCAAC +
Preference number: 6 (lower is better)
Translates to: QRVWLAFADQLH*DISLLKQVSSN
Trigger: GTTGCTCGATACCTGTTTTAACAGGCTGATGTCCAAGTGCAGTTGATCAGCAAAGGCCAACCAAACCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567926.5
CDS CAA 90 bp CCACTGCACTCCAGCCTTATAGAGGACTTCATCAGCACACTTCACTaGAAATGCACCTGGCTGCAGGTAACCATGTTAGTAAAGAATATC +
Preference number: 6 (lower is better)
Translates to: PLHSSLIEDFISTLH*KCTWLQVTMLVKNI
Trigger: GATATTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGGCTGGAGTGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567816.1
CDS TCA 72 bp AGGACTCCAGGAAATATCCAAAGCGATCGCAGTTTGTaGTGCTGTGATTGTATCATCCAAGGCAGAGGACTT +
Preference number: 6 (lower is better)
Translates to: RTPGNIQSDRSL*CCDCIIQGRGL
Trigger: AAGTCCTCTGCCTTGGATGATACAATCACAGCATCACAAACTGCGATCGCTTTGGATATTTCCTGGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000561583.5
ENST00000565627.5
ENST00000613446.4
CDS CCA 72 bp TGGAGCCATGGCTGTATATCACCACGTTGTAGACTCTaGATGATCAATGTGAAACACTTCACCAAGTCTTGG +
Preference number: 6 (lower is better)
Translates to: WSHGCISPRCRL*MINVKHFTKSW
Trigger: CCAAGACTTGGTGAAGTGTTTCACATTGATCATCCAGAGTCTACAACGTGGTGATATACAGCCATGGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000613446.4
CDS CAA 72 bp CTTGTGCTTATAGAGGACTTCATCAGCACACTTCACTaGAAATGCACCTGGCTGCAGGTAACCATGTTAGTA +
Preference number: 6 (lower is better)
Translates to: LVLIEDFISTLH*KCTWLQVTMLV
Trigger: TACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000613446.4
CDS CCA 72 bp GTCACATCTTACCCAAAGGGGAGGAAGGGCAGTAACTaGCAGATTAATCTTCAAATGGGTCATATTAGGATT +
Preference number: 6 (lower is better)
Translates to: VTSYPKGRKGSN*QINLQMGHIRI
Trigger: AATCCTAATATGACCCATTTGAAGATTAATCTGCCAGTTACTGCCCTTCCTCCCCTTTGGGTAAGATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000563698.5
ENST00000564179.5
ENST00000565627.5
ENST00000567926.5
ENST00000613446.4
CDS CCA 72 bp GAGGACTTCATCAGCACACTTCACTTGAAATGCACCTaGCTGCAGGTAACCATGTTAGTAAAGAATATCCTT +
Preference number: 6 (lower is better)
Translates to: EDFISTLHLKCT*LQVTMLVKNIL
Trigger: AAGGATATTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000567816.1
ENST00000569489.1
ENST00000613446.4
CDS CAA 72 bp AAATACCTTATAGAGGACTTCATCAGCACACTTCACTaGAAATGCACCTGGCTGCAGGTAACCATGTTAGTA +
Preference number: 6 (lower is better)
Translates to: KYLIEDFISTLH*KCTWLQVTMLV
Trigger: TACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569489.1
CDS CAA 90 bp TCTTTTTGGCTTGTGCTTATAGAGGACTTCATCAGCACACTTCACTaGAAATGCACCTGGCTGCAGGTAACCATGTTAGTAAAGAATATC +
Preference number: 6 (lower is better)
Translates to: SFWLVLIEDFISTLH*KCTWLQVTMLVKNI
Trigger: GATATTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGCACAAGCCAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000613446.4
CDS CAA 90 bp TCAGCTTTACAACTGACCACATATAAGACAATTCCTGTAATGCTGTaGTTTGTTGTGATAAGCTCAGCTCCTAGCCAACAAGTACCTTCA +
Preference number: 6 (lower is better)
Translates to: SALQLTTYKTIPVML*FVVISSAPSQQVPS
Trigger: TGAAGGTACTTGTTGGCTAGGAGCTGAGCTTATCACAACAAACAACAGCATTACAGGAATTGTCTTATATGTGGTCAGTTGTAAAGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000564179.5
ENST00000565627.5
ENST00000613446.4
CDS CAA 90 bp TCACCTTTACAACTGACCACATATAAGACAATTCCTGTAATGCTGTaGTTTGTTGTGATAAGCTCAGCTCCTAGCCAACAAGTACCTTCA +
Preference number: 6 (lower is better)
Translates to: SPLQLTTYKTIPVML*FVVISSAPSQQVPS
Trigger: TGAAGGTACTTGTTGGCTAGGAGCTGAGCTTATCACAACAAACAACAGCATTACAGGAATTGTCTTATATGTGGTCAGTTGTAAAGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563698.5
ENST00000567926.5
CDS CAA 72 bp CAACTGACCACATATAAGACAATTCCTGTAATGCTGTaGTTTGTTGTGATAAGCTCAGCTCCTAGCCAACAA +
Preference number: 6 (lower is better)
Translates to: QLTTYKTIPVML*FVVISSAPSQQ
Trigger: TTGTTGGCTAGGAGCTGAGCTTATCACAACAAACAACAGCATTACAGGAATTGTCTTATATGTGGTCAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000563698.5
ENST00000564179.5
ENST00000565627.5
ENST00000567926.5
ENST00000613446.4
CDS CAA 72 bp GCTGTCACTCAGTTGCCAAACTGTCTTAATCTTCTTTaGACCACTATATATTTCCACTCTCCATTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: AVTQLPNCLNLL*TTIYFHSPFLW
Trigger: CCACAGAAATGGAGAGTGGAAATATATAGTGGTCAAAAGAAGATTAAGACAGTTTGGCAACTGAGTGACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000567816.1
ENST00000613446.4
CDS CAA 90 bp TGTGAACATAAATACCTTATAGAGGACTTCATCAGCACACTTCACTaGAAATGCACCTGGCTGCAGGTAACCATGTTAGTAAAGAATATC +
Preference number: 6 (lower is better)
Translates to: CEHKYLIEDFISTLH*KCTWLQVTMLVKNI
Trigger: GATATTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAAGTGAAGTGTGCTGATGAAGTCCTCTATAAGGTATTTATGTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569489.1
CDS GCA 72 bp TATGAAATCACACTACTGCTCATTTTGCACCACAGTTaGTCAGCAAAATCAAGATCACTCCGAACTTTGAAA +
Preference number: 6 (lower is better)
Translates to: YEITLLLILHHS*SAKSRSLRTLK
Trigger: TTTCAAAGTTCGGAGTGATCTTGATTTTGCTGAGCAACTGTGGTGCAAAATGAGCAGTAGTGTGATTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000613446.4
CDS CCA 72 bp AATTTTTATCAGCCAAAGGGGAGGAAGGGCAGTAACTaGCAGATTAATCTTCAAATGGGTCATATTAGGATT +
Preference number: 6 (lower is better)
Translates to: NFYQPKGRKGSN*QINLQMGHIRI
Trigger: AATCCTAATATGACCCATTTGAAGATTAATCTGCCAGTTACTGCCCTTCCTCCCCTTTGGCTGATAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565960.1
CDS CAA 72 bp TACAGCAGTTGGTCTGACTGGCAGCTGAAAAATGTGTaGCTCATCAAGAGGATTTTGTTTGTAATACTTTAT +
Preference number: 6 (lower is better)
Translates to: YSSWSDWQLKNV*LIKRILFVILY
Trigger: ATAAAGTATTACAAACAAAATCCTCTTGATGAGCAACACATTTTTCAGCTGCCAGTCAGACCAACTGCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307897.10
ENST00000446801.6
ENST00000535141.6
ENST00000565627.5
ENST00000567816.1
ENST00000613446.4