RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN21 (Homo sapiens)

Ensembl gene IDs: ENSG00000166529

Ensembl transcript IDs: ENST00000292450.9, ENST00000438937.1, ENST00000456748.6, ENST00000477297.1, ENST00000543588.2

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTaGGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTC +
Preference number: 1 (lower is better)
Translates to: LCSSELASVEPPDTF*GPPACHVAVELALL
Trigger: GAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR CCA 90 bp GACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATaGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGT +
Preference number: 1 (lower is better)
Translates to: DWIHVCLTTQKVMLA*LTGTLSVAKGLCSS
Trigger: ACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR CCA 90 bp ACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGCCTGCCATGTTGCTGTaGAGCTCGCACTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: TGTLSVAKGLCSSELASVPAMLL*SSHSSG
Trigger: GCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGG...CACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR CCA 90 bp CTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTCCTGCCATGTTGCTGTaGAGCTCGCACTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LTGTLSVAKGLCSSELASPAMLL*SSHSSG
Trigger: GCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGG...ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR GCA 90 bp AAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCTGCCTGCCATGTTaGTGTGGAGCTCGCACTCCT +
Preference number: 2 (lower is better)
Translates to: KVMLAWLTGTLSVAKGLCSCLPC*CGARTP
Trigger: AGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGA...GCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR TCA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTGAGTGTGGAACCTCCTaGCACCTTCTGAGGACCTCC +
Preference number: 2 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTECGTS*HLLRTS
Trigger: GGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTC...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR TCA 90 bp TCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCTCGATGCTGCTGCAATaGCAAGACTTCTTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: SEDLLPAMLLWSSHSSGISMLLQ*QDFFLV
Trigger: AACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGA...GATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR CAA 90 bp TGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTaGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATG +
Preference number: 2 (lower is better)
Translates to: CHVAVELALLRHPLM*SDTNSITGIDAAAM
Trigger: CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR GCA 90 bp ACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCGGAATCGATGCTGCTaGAATGACAAGACTTCTTTC +
Preference number: 2 (lower is better)
Translates to: TLSVAKGLCSSELASVEPRNRCC*NDKTSF
Trigger: GAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCG...AGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR CCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCCTGCCATGTTGCTGTaGAGCTCGCACTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTPAMLL*SSHSSG
Trigger: GCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGG...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR GCA 90 bp AAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTATCACCGGAATCGATaGTGCTGCAATGACAAGACT +
Preference number: 2 (lower is better)
Translates to: KVMLAWLTGTLSVAKGLCYHRNR*CCNDKT
Trigger: AGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATA...GCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR GCA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCGGAATCGATGCTGCTaGAATGACAAGACTTCTTTC +
Preference number: 2 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTRNRCC*NDKTSF
Trigger: GAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCG...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR GCA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTCCTGCCTGCCATGTTaGTGTGGAGCTCGCACTCCT +
Preference number: 2 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMASCLPC*CGARTP
Trigger: AGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGA...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR CCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTCTGCTCCAGTGAACTaGCGAGTGTGGAACCTCCTG +
Preference number: 2 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYSAPVN*RVWNLL
Trigger: CAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGA...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR TCA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAATCGATGCTGCTGCAATaGCAAGACTTCTTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGESMLLQ*QDFFLV
Trigger: AACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGA...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR GCA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAATATCACCGGAATCGATaGTGCTGCAATGACAAGACT +
Preference number: 2 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGEYHRNR*CCNDKT
Trigger: AGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATA...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR CCA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCGTGAACTGGCGAGTGTaGAACCTCCTGACACCTTCT +
Preference number: 2 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGVNWRV*NLLTPS
Trigger: AGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCAC...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR GCA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTCGGAATCGATGCTGCTaGAATGACAAGACTTCTTTC +
Preference number: 2 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMARNRCC*NDKTSF
Trigger: GAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCG...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR CAA 90 bp AATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGCTCCTGCCTGCCATGTaGCTGTGGAGCTCGCACTCC +
Preference number: 3 (lower is better)
Translates to: NAGMAYWDPKCGEGTLLQLLPAM*LWSSHS
Trigger: GGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAG...CTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR TCA 72 bp AGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTaGGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTC +
Preference number: 3 (lower is better)
Translates to: SELASVEPPDTF*GPPACHVAVEL
Trigger: GAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR GCA 72 bp TGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTaGTCCAGTGAACTGGCGAGTGTGGAACCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: WLTGTLSVAKGL*SSELASVEPPD
Trigger: GTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR-3UTR CAA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAACTCCTGCCTGCCATGTaGCTGTGGAGCTCGCACTCC +
Preference number: 3 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGELLPAM*LWSSHS
Trigger: GGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAG...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR CCA 72 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTaGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAG +
Preference number: 3 (lower is better)
Translates to: FNYAKGNAGMAY*DPKCGEGTLLQ
Trigger: CTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
3UTR CCA 72 bp CACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATaGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTC +
Preference number: 3 (lower is better)
Translates to: HVCLTTQKVMLA*LTGTLSVAKGL
Trigger: GAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAAGCGCTCTCCGGGCAATaGTCCTGCACCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVEALSGQ*SCTQAW
Trigger: CCAGGCCTGGGTGCAGGAGCATTGCCCGGAGAGCGC...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000456748.6
CDS-3UTR TCA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATCTGAGGCCCGCATGCTaGCTGAAGCTCTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: TSCLPCCCGARTPQASPDLRPAC*LKLFPH
Trigger: ATGTGGGAAGAGCTTCAGTCAGCATGCGGGCCTCAG...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTaGGGACCTCCTGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVEPPDTF*GPPACH
Trigger: ATGGCAGGCAGGAGGTCCTCAGAAGGTGTCAGGAGG...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTGCGCTCTCCGGGCAATaGTCCTGCACCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTALSGQ*SCTQAW
Trigger: CCAGGCCTGGGTGCAGGAGCATTGCCCGGAGAGCGC...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000456748.6
CDS-3UTR GCA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGCTGTGGCTGCATGCTaGTCGGGGATTCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TSCLPCCCGARTPQASPDAVAAC*SGIPLQ
Trigger: CTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGC...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCAGGGCTGTGGCTGCATaGTGCTCGGGGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SEDLLPAMLLWSSHSSGIRAVAA*CSGIPL
Trigger: CAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCT...GATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGTCCAAGGGCTGTGGCTaGATGCTGCTCGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: TGTLSVAKGLCSSELASVSKGCG*MLLGDS
Trigger: GGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGA...CACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAAGGTCTCCAAGGGCTGTaGCTGCATGCTGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEGLQGL*LHAARG
Trigger: TCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACC...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGGTCTCCAAGGGCTGTaGCTGCATGCTGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LTGTLSVAKGLCSSELASGLQGL*LHAARG
Trigger: TCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACC...ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGGCCCGCATGCTGACTaGAGCTCTTCCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: TGTLSVAKGLCSSELASVGPHAD*SSSHIR
Trigger: ACGAATGTGGGAAGAGCTTCAGTCAGCATGCGGGCC...CACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCCTCCTGACACCTTCTaGGGACCTCCTGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: DSAPVNWRVWNLLTPSEDPPDTF*GPPACH
Trigger: ATGGCAGGCAGGAGGTCCTCAGAAGGTGTCAGGAGG...GTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAAGAGTGTGGAACCTCCTaGCACCTTCTGAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVEECGTS*HLLRTS
Trigger: GGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTC...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGGGACTCTGCTCCAGTaGACTGGCGAGTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSEGTLLQ*TGECGT
Trigger: GGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCC...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGGGACTCTGCTCCAGTaGACTGGCGAGTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: AWLTGTLSVAKGLCSSELGTLLQ*TGECGT
Trigger: GGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCC...CAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGAGGGCTGTGGCTGCATaGTGCTCGGGGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLRAVAA*CSGIPL
Trigger: CAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCT...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGGTGGCGAAGGGACTCTaGTCCAGTGAACTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLVAKGL*SSELAS
Trigger: ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCAC...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGCCTGCCATGTTGCTGTaGAGCTCGCACTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AWLTGTLSVAKGLCSSELPAMLL*SSHSSG
Trigger: GCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGG...CAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGCCTGCCATGTTGCTGTaGAGCTCGCACTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSEPAMLL*SSHSSG
Trigger: GCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGG...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATTCTGCTCCAGTGAACTaGCGAGTGTGGAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: TSCLPCCCGARTPQASPDSAPVN*RVWNLL
Trigger: CAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGA...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCTTGGAGCCTGCCTCTTaGAGAGGGGGTTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SEDLLPAMLLWSSHSSGILEPAS*RGGFVP
Trigger: AGGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAA...GATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTGGCCCGCATGCTGACTaGAGCTCTTCCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: TLSVAKGLCSSELASVEPGPHAD*SSSHIR
Trigger: ACGAATGTGGGAAGAGCTTCAGTCAGCATGCGGGCC...AGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAATCCTGCCTGCCATGTTaGTGTGGAGCTCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSESCLPC*CGARTP
Trigger: AGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGA...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAAGTGGCGAAGGGACTCTaGTCCAGTGAACTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEVAKGL*SSELAS
Trigger: ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCAC...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGGGAGGAGTTGAGACCTaGTGTCCTGGCTCATCCAGT +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLGGVET*CPGSSS
Trigger: ACTGGATGAGCCAGGACACCAGGTCTCAACTCCTCC...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000456748.6
CDS-3UTR CCA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTGTGTGGAGTCTCTGGTaGGAGCTGAGGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTVWSLW*ELRPAC
Trigger: GCATGCGGGCCTCAGCTCCCACCAGAGACTCCACAC...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAATCTGCTCCAGTGAACTaGCGAGTGTGGAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVESAPVN*RVWNLL
Trigger: CAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGA...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGTCTGCTCCAGTGAACTaGCGAGTGTGGAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: TGTLSVAKGLCSSELASVSAPVN*RVWNLL
Trigger: CAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGA...CACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGGAGGAGTTGAGACCTaGTGTCCTGGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: LTGTLSVAKGLCSSELASGGVET*CPGSSS
Trigger: GCTGGATGAGCCAGGACACCAGGTCTCAACTCCTCC...ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543588.2
CDS-3UTR TCA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATTTTCTGCTCATCTGCTaGTTCCTCGTGCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: TSCLPCCCGARTPQASPDFLLIC*FLVLGT
Trigger: AGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAA...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGTTGGAGCCTGCCTCTTaGAGAGGGGGTTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLLEPAS*RGGFVP
Trigger: AGGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAA...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGTCTCCAAGGGCTGTaGCTGCATGCTGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: TTQKVMLAWLTGTLSVAKGLQGL*LHAARG
Trigger: TCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACC...CTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCACAAGTTAAACCATaGATCAGAGCCGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: TLSVAKGLCSSELASVEPPQVKP*IRAAPG
Trigger: ACCCGGAGCGGCTCTGATTCATGGTTTAACTTGTGG...AGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACCACAAGTTAAACCATaGATCAGAGCCGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEPQVKP*IRAAPG
Trigger: ACCCGGAGCGGCTCTGATTCATGGTTTAACTTGTGG...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAAACCTTTCTTGGATCTTaGGCGAACTCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVETFLGS*ANSCSS
Trigger: TGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGT...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAAGTGGAGGGTGAGGTTTaGGCTGTGGCTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEVEGEV*AVAESF
Trigger: AAAGCTTTCAGCCACAGCTCAAACCTCACCCTCCAC...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACGTGGAGGGTGAGGTTTaGGCTGTGGCTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: DSAPVNWRVWNLLTPSEDVEGEV*AVAESF
Trigger: AAAGCTTTCAGCCACAGCTCAAACCTCACCCTCCAC...GTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAAAACAACAGGAGCGCTTaGAAGTTACGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVENNRSA*KLRCFS
Trigger: GGAGAAGCACCGTAACTTTCAAGCGCTCCTGTTGTT...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATTCTGCTGATTCCTCGTaGTGGGTACTCAATCTGCAA +
Preference number: 4 (lower is better)
Translates to: TSCLPCCCGARTPQASPDSADSS*WVLNLQ
Trigger: TTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGA...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGTCCTTTCTTGGAGCCTaGCTCTTGAAGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLSFLGA*LLKRGF
Trigger: AAACCCCCTCTTCAAGAGGCAGGCTCCAAGAAAGGA...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456748.6
CDS-3UTR CCA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATATCTCGGACCTTTCTTaGATCTTGAGCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TSCLPCCCGARTPQASPDISDLS*ILSELL
Trigger: CAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGAT...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp TCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCGCTGATTCCTCGTGCTaGGTACTCAATCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: SEDLLPAMLLWSSHSSGIADSSC*VLNLQS
Trigger: AGATTGCAGATTGAGTACCCAGCACGAGGAATCAGC...GATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGACTGCCTCTCTAAGCTaGCCTCAGGTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLTASLS*PQVYWR
Trigger: TCGCCAATAAACCTGAGGCCAGCTTAGAGAGGCAGT...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAAACTGCCTCTCTAAGCTaGCCTCAGGTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVETASLS*PQVYWR
Trigger: TCGCCAATAAACCTGAGGCCAGCTTAGAGAGGCAGT...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCAAGACTCGTATTTGTaGCTGGTCTCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLSVAKGLCSSELASVEPQDSYL*LVSKGC
Trigger: ACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTG...AGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAATTTCTGCTCATCTGCTaGTTCCTCGTGCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEFLLIC*FLVLGT
Trigger: AGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAA...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGCCAGTGTGGACTCGCTaGTGTTTGGAAAGATTGGAC +
Preference number: 4 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSEPVWTR*CLERLD
Trigger: GTCCAATCTTTCCAAACATCAGCGAGTCCACACTGG...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGCCAGTGTGGACTCGCTaGTGTTTGGAAAGATTGGAC +
Preference number: 4 (lower is better)
Translates to: AWLTGTLSVAKGLCSSELPVWTR*CLERLD
Trigger: GTCCAATCTTTCCAAACATCAGCGAGTCCACACTGG...CAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGAACAACAGGAGCGCTTaGAAGTTACGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSENNRSA*KLRCFS
Trigger: GGAGAAGCACCGTAACTTTCAAGCGCTCCTGTTGTT...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTaGACTGGCGAGTGTGGAACC +
Preference number: 4 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGEGTLLQ*TGECGT
Trigger: GGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCC...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGATCAGAGGCCCCACCTaGTCCTGTGGAGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMIRGPT*SCGGLG
Trigger: CCCTAGGCCTCCACAGGAGCAGGTGGGGCCTCTGAT...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAATCCAAGGGCTGTGGCTaGATGCTGCTCGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGESKGCG*MLLGDS
Trigger: GGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGA...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAATCTGCTGATTCCTCGTaGTGGGTACTCAATCTGCAA +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVESADSS*WVLNLQ
Trigger: TTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGA...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGGCTTCAGAACCTTTCTaGTCATCTGCTGATTCCTCG +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLASEPF*SSADSS
Trigger: CGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGC...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp GACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACACCTTTCTTGGAGCCTaGCTCTTGAAGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: DSAPVNWRVWNLLTPSEDTFLGA*LLKRGF
Trigger: AAACCCCCTCTTCAAGAGGCAGGCTCCAAGAAAGGT...GTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR CCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAAACTCGTATTTGTGACTaGTCTCCAAGGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSETRICD*SPRAVA
Trigger: AGCCACAGCCCTTGGAGACCAGTCACAAATACGAGT...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACACTCGTATTTGTGACTaGTCTCCAAGGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DSAPVNWRVWNLLTPSEDTRICD*SPRAVA
Trigger: AGCCACAGCCCTTGGAGACCAGTCACAAATACGAGT...GTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAAGCTGATTCCTCGTGCTaGGTACTCAATCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: GTLSVAKGLCSSELASVEADSSC*VLNLQS
Trigger: AGATTGCAGATTGAGTACCCAGCACGAGGAATCAGC...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACACTGCCTCTCTAAGCTaGCCTCAGGTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: DSAPVNWRVWNLLTPSEDTASLS*PQVYWR
Trigger: TCGCCAATAAACCTGAGGCCAGCTTAGAGAGGCAGT...GTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp TCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCATAACGTCTCTCTCCTaGGGTAGGTTTAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SEDLLPAMLLWSSHSSGIITSLS*GRFSRN
Trigger: GTTCCTACTAAACCTACCCCAGGAGAGAGACGTTAT...GATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR TCA 90 bp AATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTTCCTTTGCAGTTCCTaGGGAGGATATCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NAGMAYWDPKCGEGTLLQFLCSS*GGYLLP
Trigger: TGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAA...CTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAATTCCTTTGCAGTTCCTaGGGAGGATATCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEFLCSS*GGYLLP
Trigger: TGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAA...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTTTGGAGCCTGCCTCTTaGAGAGGGGGTTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTLEPAS*RGGFVP
Trigger: AGGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAA...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGCTGAGGCCCGCATGCTaGCTGAAGCTCTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: LTTQKVMLAWLTGTLSVALRPAC*LKLFPH
Trigger: ATGTGGGAAGAGCTTCAGTCAGCATGCGGGCCTCAG...CGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGGCTGTGGCTGCATGCTaGTCGGGGATTCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LTTQKVMLAWLTGTLSVAAVAAC*SGIPLQ
Trigger: CTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGC...CGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGCGGAATCGATGCTGCTaGAATGACAAGACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TGTLSVAKGLCSSELASVRNRCC*NDKTSF
Trigger: GAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCG...CACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGATCTCGGACCTTTCTTaGATCTTGAGCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: AWLTGTLSVAKGLCSSELISDLS*ILSELL
Trigger: CAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGAT...CAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAAGCTGATTCCTCGTGCTaGGTACTCAATCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEADSSC*VLNLQS
Trigger: AGATTGCAGATTGAGTACCCAGCACGAGGAATCAGC...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGATCTTTGCACTGATATaGCGCCTCTTCTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLIFALI*RLFCVH
Trigger: ATGCACACAGAAGAGGCGCCATATCAGTGCAAAGAT...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGCCGGTGTGGATTCTGTaGTGTTTATTGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLPVWIL*CLLKLE
Trigger: CTCCAACTTCAATAAACACCACAGAATCCACACCGG...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGTGTGTTCTCCTTTCTTaGAGCCTGCCTCTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: AWLTGTLSVAKGLCSSELCVLLS*SLPLEE
Trigger: CTCTTCAAGAGGCAGGCTCCAAGAAAGGAGAACACA...CAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456748.6
3UTR CAA 72 bp GCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTaGAGTGATACAAACTCTATCACCGGAATCGATGCT +
Preference number: 4 (lower is better)
Translates to: AVELALLRHPLM*SDTNSITGIDA
Trigger: AGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAATCGATGCTGCTGCAATaGCAAGACTTCTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSESMLLQ*QDFFLV
Trigger: AACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGA...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCCTCCTGACACCTTCTaGGGACCTCCTGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTPPDTF*GPPACH
Trigger: ATGGCAGGCAGGAGGTCCTCAGAAGGTGTCAGGAGG...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTATCAGAGGCCCCACCTaGTCCTGTGGAGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: TNSITGIDAAAMTRLLSGIRGPT*SCGGLG
Trigger: CCCTAGGCCTCCACAGGAGCAGGTGGGGCCTCTGAT...ACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGCGGAATCGATGCTGCTaGAATGACAAGACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSERNRCC*NDKTSF
Trigger: GAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCG...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTTATCACCGGAATCGATaGTGCTGCAATGACAAGACT +
Preference number: 4 (lower is better)
Translates to: TLSVAKGLCSSELASVEPYHRNR*CCNDKT
Trigger: AGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATA...AGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGCTGGCATGGCTTACTaGGACCCTAAGTGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGEAGMAY*DPKCGE
Trigger: TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGC...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGGTGGAGGGTGAGGTTTaGGCTGTGGCTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LTTQKVMLAWLTGTLSVAVEGEV*AVAESF
Trigger: AAAGCTTTCAGCCACAGCTCAAACCTCACCCTCCAC...CGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAAATGTTTAAGAAGGTCTaGGCTCTGCCCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEMFKKV*ALPKSF
Trigger: AAAGCTTTTGGGCAGAGCTCAGACCTTCTTAAACAT...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCGAGTGTGGAACCTCCTaGCACCTTCTGAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTECGTS*HLLRTS
Trigger: GGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTC...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTATCAGAGGCCCCACCTaGTCCTGTGGAGGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFIRGPT*SCGGLG
Trigger: CCCTAGGCCTCCACAGGAGCAGGTGGGGCCTCTGAT...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGCCCTTTGAGCCCCTCTaGTTCAGAACCTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LTTQKVMLAWLTGTLSVAPFEPL*FRTFLL
Trigger: GAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGG...CGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGACCTTTCTTGGAGCCTaGCTCTTGAAGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TTQKVMLAWLTGTLSVAKTFLGA*LLKRGF
Trigger: AAACCCCCTCTTCAAGAGGCAGGCTCCAAGAAAGGT...CTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR GCA 90 bp CTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTTGGAAAGATTGGACTTaGTACAGAAGGTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LTGTLSVAKGLCSSELASWKDWT*YRRSFH
Trigger: GTGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCCA...ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGTCCTGCCTGCCATGTTaGTGTGGAGCTCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: WIHVCLTTQKVMLAWLTGSCLPC*CGARTP
Trigger: AGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGA...CCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGGAGGAGTTGAGACCTaGTGTCCTGGCTCATCCAGT +
Preference number: 4 (lower is better)
Translates to: FNYAKGNAGMAYWDPKCGGGVET*CPGSSS
Trigger: ACTGGATGAGCCAGGACACCAGGTCTCAACTCCTCC...GCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000456748.6
CDS-3UTR CCA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGTCCTCACCAGACTCTTaGATGTACAGGGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMSSPDS*MYRGPQ
Trigger: TTGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGA...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTATCTCGGACCTTTCTTaGATCTTGAGCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTISDLS*ILSELL
Trigger: CAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGAT...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp AAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCATAACGTCTCTCTCCTaGGGTAGGTTTAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: KVMLAWLTGTLSVAKGLCITSLS*GRFSRN
Trigger: GTTCCTACTAAACCTACCCCAGGAGAGAGACGTTAT...GCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR CCA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTGTGTGGAGTCTCTGGTaGGAGCTGAGGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFVWSLW*ELRPAC
Trigger: GCATGCGGGCCTCAGCTCCCACCAGAGACTCCACAC...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGTGTGGAGTCTCTGGTaGGAGCTGAGGCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSVWSLW*ELRPAC
Trigger: GCATGCGGGCCTCAGCTCCCACCAGAGACTCCACAC...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp AAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCCCGGTGTGGATTCTGTaGTGTTTATTGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KVMLAWLTGTLSVAKGLCPVWIL*CLLKLE
Trigger: CTCCAACTTCAATAAACACCACAGAATCCACACCGG...GCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGATGTTTGGAAAGATTaGACTTGCTACAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TGTLSVAKGLCSSELASVDVWKD*TCYRRS
Trigger: AGACCTTCTGTAGCAAGTCCAATCTTTCCAAACATC...CACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACCCTGCCATGTTGCTGTaGAGCTCGCACTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYPAMLL*SSHSSG
Trigger: GCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGG...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGACCTTTCTTGGATCTTaGGCGAACTCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LTTQKVMLAWLTGTLSVATFLGS*ANSCSS
Trigger: TGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGT...CGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGAGGTTTAGTAGGAACTaGTTCTCTACCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: NAGMAYWDPKCGEGTLLQRFSRN*FSTFLG
Trigger: TCCAAGAAAGGTAGAGAATCAGTTCCTACTAAACCT...CTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR TCA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTCTGAGGCCCGCATGCTaGCTGAAGCTCTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMALRPAC*LKLFPH
Trigger: ATGTGGGAAGAGCTTCAGTCAGCATGCGGGCCTCAG...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTTCCAAGGGCTGTGGCTaGATGCTGCTCGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: NSITGIDAAAMTRLLSGFSKGCG*MLLGDS
Trigger: GGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGA...AAAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCCCCTTTGAGCCCCTCTaGTTCAGAACCTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FNYAKGNAGMAYWDPKCGPFEPL*FRTFLL
Trigger: GAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGG...GCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAATCAAGGTTTACGCACTaGCTCTCTAAGCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGESRFTH*LSKLAS
Trigger: TGAGGCCAGCTTAGAGAGGCAGTGCGTAAACCTTGA...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGATGTTTGGAAAGATTaGACTTGCTACAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: AWLTGTLSVAKGLCSSELDVWKD*TCYRRS
Trigger: AGACCTTCTGTAGCAAGTCCAATCTTTCCAAACATC...CAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGTGAACTGGCGAGTGTaGAACCTCCTGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: FNYAKGNAGMAYWDPKCGVNWRV*NLLTPS
Trigger: AGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCAC...GCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTGATCTTCGAGGAGAGTaGCAGCCTCTTCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: TNSITGIDAAAMTRLLSGDLRGE*QPLQRS
Trigger: AGAGCGCTGAAGAGGCTGTCACTCTCCTCGAAGATC...ACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000456748.6
CDS-3UTR TCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGCCCGCATGCTGACTaGAGCTCTTCCCACATTCGT +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSGPHAD*SSSHIR
Trigger: ACGAATGTGGGAAGAGCTTCAGTCAGCATGCGGGCC...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTGAGTGTGGAACCTCCTaGCACCTTCTGAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFECGTS*HLLRTS
Trigger: GGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTC...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCGCTGTGGCTGCATGCTaGTCGGGGATTCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGAVAAC*SGIPLQ
Trigger: CTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGC...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTAGGGCTGTGGCTGCATaGTGCTCGGGGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFRAVAA*CSGIPL
Trigger: CAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCT...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGCTTCAGAACCTTTCTaGTCATCTGCTGATTCCTCG +
Preference number: 4 (lower is better)
Translates to: NYAKGNAGMAYWDPKCGEASEPF*SSADSS
Trigger: CGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGC...TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCTCCTGCCTGCCATGTTaGTGTGGAGCTCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGSCLPC*CGARTP
Trigger: AGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGA...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCGTGGCGAAGGGACTCTaGTCCAGTGAACTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGVAKGL*SSELAS
Trigger: ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCAC...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTCCTCACCAGACTCTTaGATGTACAGGGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMASSPDS*MYRGPQ
Trigger: TTGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGA...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp TGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGGTGAACTGGCGAGTGTaGAACCTCCTGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: WIHVCLTTQKVMLAWLTGVNWRV*NLLTPS
Trigger: AGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCAC...CCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTGATCTTCGAGGAGAGTaGCAGCCTCTTCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: NSITGIDAAAMTRLLSGFDLRGE*QPLQRS
Trigger: AGAGCGCTGAAGAGGCTGTCACTCTCCTCGAAGATC...AAAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000456748.6
CDS-3UTR TCA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGTTCCTTTGCAGTTCCTaGGGAGGATATCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMFLCSS*GGYLLP
Trigger: TGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAA...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGCAAGACTCGTATTTGTaGCTGGTCTCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: WIHVCLTTQKVMLAWLTGQDSYL*LVSKGC
Trigger: ACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTG...CCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCACTCGTATTTGTGACTaGTCTCCAAGGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTTRICD*SPRAVA
Trigger: AGCCACAGCCCTTGGAGACCAGTCACAAATACGAGT...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCCCACAAGTTAAACCATaGATCAGAGCCGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGPQVKP*IRAAPG
Trigger: ACCCGGAGCGGCTCTGATTCATGGTTTAACTTGTGG...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACACCTTTCTTGGATCTTaGGCGAACTCCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYTFLGS*ANSCSS
Trigger: TGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGT...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTTTCTGCTCATCTGCTaGTTCCTCGTGCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYFLLIC*FLVLGT
Trigger: AGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAA...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGAAATTATATCCCCTTTaGGCCCCTCTGCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMKLYPL*APLLQN
Trigger: GTTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTT...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCTCGATGCTGCTGCAATaGCAAGACTTCTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FNYAKGNAGMAYWDPKCGSMLLQ*QDFFLV
Trigger: AACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGA...GCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCGCTTCAGAACCTTTCTaGTCATCTGCTGATTCCTCG +
Preference number: 4 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTASEPF*SSADSS
Trigger: CGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGC...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTCCCTTTGAGCCCCTCTaGTTCAGAACCTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NSITGIDAAAMTRLLSGFPFEPL*FRTFLL
Trigger: GAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGG...AAAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTCAAGGTTTACGCACTaGCTCTCTAAGCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYSRFTH*LSKLAS
Trigger: TGAGGCCAGCTTAGAGAGGCAGTGCGTAAACCTTGA...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGTATCACCGGAATCGATaGTGCTGCAATGACAAGACT +
Preference number: 4 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMYHRNR*CCNDKT
Trigger: AGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATA...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGCCATGCCTAGTACCTTaGTCATCATGTAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMPCLVP*SSCKLQ
Trigger: CTGGAGTTTACATGATGACCAAGGTACTAGGCATGG...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGATCTTTGCACTGATATaGCGCCTCTTCTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMIFALI*RLFCVH
Trigger: ATGCACACAGAAGAGGCGCCATATCAGTGCAAAGAT...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCAAGGTAATGCTGGCATaGCTTACTGGGACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTKVMLA*LTGTLS
Trigger: ACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTCAAGACTCGTATTTGTaGCTGGTCTCCAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSQDSYL*LVSKGC
Trigger: ACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTG...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTCCAGTGTGGACTCGCTaGTGTTTGGAAAGATTGGAC +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSPVWTR*CLERLD
Trigger: GTCCAATCTTTCCAAACATCAGCGAGTCCACACTGG...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTAACAACAGGAGCGCTTaGAAGTTACGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFNNRSA*KLRCFS
Trigger: GGAGAAGCACCGTAACTTTCAAGCGCTCCTGTTGTT...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTCAAGGTTTACGCACTaGCTCTCTAAGCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFSRFTH*LSKLAS
Trigger: TGAGGCCAGCTTAGAGAGGCAGTGCGTAAACCTTGA...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp TGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGCCATGCCTAGTACCTTaGTCATCATGTAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: WIHVCLTTQKVMLAWLTGPCLVP*SSCKLQ
Trigger: CTGGAGTTTACATGATGACCAAGGTACTAGGCATGG...CCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCCATGCCTAGTACCTTaGTCATCATGTAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTPCLVP*SSCKLQ
Trigger: CTGGAGTTTACATGATGACCAAGGTACTAGGCATGG...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACAAGGTAATGCTGGCATaGCTTACTGGGACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYKVMLA*LTGTLS
Trigger: ACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp ACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTAAATTATATCCCCTTTaGGCCCCTCTGCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TNSITGIDAAAMTRLLSGKLYPL*APLLQN
Trigger: GTTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTT...ACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp AACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTTCTGCTGATTCCTCGTaGTGGGTACTCAATCTGCAA +
Preference number: 4 (lower is better)
Translates to: NSITGIDAAAMTRLLSGFSADSS*WVLNLQ
Trigger: TTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGA...AAAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp TGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGTGGAAAGATTGGACTTaGTACAGAAGGTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: WIHVCLTTQKVMLAWLTGWKDWT*YRRSFH
Trigger: GTGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCCA...CCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR GCA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCTGGAAAGATTGGACTTaGTACAGAAGGTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTWKDWT*YRRSFH
Trigger: GTGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCCA...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACATCTTTGCACTGATATaGCGCCTCTTCTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYIFALI*RLFCVH
Trigger: ATGCACACAGAAGAGGCGCCATATCAGTGCAAAGAT...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp ACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTCCGGTGTGGATTCTGTaGTGTTTATTGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TNSITGIDAAAMTRLLSGPVWIL*CLLKLE
Trigger: CTCCAACTTCAATAAACACCACAGAATCCACACCGG...ACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTAAGGTAATGCTGGCATaGCTTACTGGGACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSKVMLA*LTGTLS
Trigger: ACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp AACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTAAATTATATCCCCTTTaGGCCCCTCTGCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: NSITGIDAAAMTRLLSGFKLYPL*APLLQN
Trigger: GTTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTT...AAAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCTCGATGCTGCTGCAATaGCAAGACTTCTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGSMLLQ*QDFFLV
Trigger: AACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGA...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CTTAATGTTTCTTCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAATCCTCACCAGACTCTTaGATGTACAGGGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LNVSSLTRLDTRLFNYAKSSPDS*MYRGPQ
Trigger: TTGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGA...TTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGAAGAAACATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CTTAATGTTTCTTCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGCTGGCATGGCTTACTaGGACCCTAAGTGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: LNVSSLTRLDTRLFNYAKAGMAY*DPKCGE
Trigger: TTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGC...TTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGAAGAAACATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTATGTTTAAGAAGGTCTaGGCTCTGCCCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSMFKKV*ALPKSF
Trigger: AAAGCTTTTGGGCAGAGCTCAGACCTTCTTAAACAT...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGTTTAAGAAGGTCTaGGCTCTGCCCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGMFKKV*ALPKSF
Trigger: AAAGCTTTTGGGCAGAGCTCAGACCTTCTTAAACAT...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CCA 90 bp CTTAATGTTTCTTCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGTGAACTGGCGAGTGTaGAACCTCCTGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: LNVSSLTRLDTRLFNYAKVNWRV*NLLTPS
Trigger: AGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCAC...TTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGAAGAAACATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTAGGTTTAGTAGGAACTaGTTCTCTACCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSRFSRN*FSTFLG
Trigger: TCCAAGAAAGGTAGAGAATCAGTTCCTACTAAACCT...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR TCA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACGTGTTTGGTGAGATTTaGGCTATTACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYVFGEI*AITKGF
Trigger: AAAGCCTTTAGTAATAGCTCAAATCTCACCAAACAC...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR CCA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTGATGTTTGGAAAGATTaGACTTGCTACAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFDVWKD*TCYRRS
Trigger: AGACCTTCTGTAGCAAGTCCAATCTTTCCAAACATC...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR TCA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGTGTTTGGTGAGATTTaGGCTATTACTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSVFGEI*AITKGF
Trigger: AAAGCCTTTAGTAATAGCTCAAATCTCACCAAACAC...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR CAA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATCTCCTCACCAGACTCTaGGATGTACAGGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TSCLPCCCGARTPQASPDLLTRL*DVQGPP
Trigger: TGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGAG...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGCCTGCCATGTaGCTGTGGAGCTCGCACTCC +
Preference number: 5 (lower is better)
Translates to: DSAPVNWRVWNLLTPSEDLLPAM*LWSSHS
Trigger: GGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAG...GTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp TCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCTTGGAGCCTGCCTCTaGAAGAGGGGGTTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: SEDLLPAMLLWSSHSSGILGACL*KRGFCS
Trigger: GGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAAG...GATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGGTTCGTTTGGAGGAGTaGAGACCTGGTGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLVRLEE*RPGVLA
Trigger: AGCCAGGACACCAGGTCTCAACTCCTCCAAACGAAC...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp TCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCGACCTTTCTTGGATCTaGAGCGAACTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SEDLLPAMLLWSSHSSGIDLSWI*SELLLL
Trigger: GAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTC...GATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGTCCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAATGCTCGGGGATTCCTTaGCAGTTCCTGAGGAGGATA +
Preference number: 5 (lower is better)
Translates to: GTLSVAKGLCSSELASVECSGIP*QFLRRI
Trigger: TATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCA...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGGACCTTTCTTGGATCTaGAGCGAACTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: APVNWRVWNLLTPSEDLLDLSWI*SELLLL
Trigger: GAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTC...CAGGAGGTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS TCA 90 bp CAAGGGCTGTGGCTGCATGCTGCTCGGGGATTCCTTTGCAGTTCCTaGGGAGGATATCTTCTCCCACACCGGTTTCTGTTCGTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: QGLWLHAARGFLCSS*GGYLLPHRFLFVWR
Trigger: CCTCCAAACGAACAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS-3UTR CAA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACCGGTTTCTGTTCGTTaGGAGGAGTTGAGACCTGGT +
Preference number: 5 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSEPVSVR*EELRPG
Trigger: ACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGG...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp CTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTTGCTCGGGGATTCCTTaGCAGTTCCTGAGGAGGATA +
Preference number: 5 (lower is better)
Translates to: LTGTLSVAKGLCSSELASCSGIP*QFLRRI
Trigger: TATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCA...ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGTGCTCGGGGATTCCTTaGCAGTTCCTGAGGAGGATA +
Preference number: 5 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSECSGIP*QFLRRI
Trigger: TATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCA...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATAATCTCGGACCTTTCTaGGATCTTGAGCGAACTCCT +
Preference number: 5 (lower is better)
Translates to: TSCLPCCCGARTPQASPDNLGPF*DLERTP
Trigger: AGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATT...ATCAGGGGATGCCTGAGGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGCAACAACAGGAGCGCTaGAAAGTTACGGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSEQQQER*KVTVLL
Trigger: GAGAAGCACCGTAACTTTCAAGCGCTCCTGTTGTTG...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCAACAACAGGAGCGCTaGAAAGTTACGGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: DSAPVNWRVWNLLTPSEDQQQER*KVTVLL
Trigger: GAGAAGCACCGTAACTTTCAAGCGCTCCTGTTGTTG...GTCCTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp CCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGCTCCTGCCTGCCATGTaGCTGTGGAGCTCGCACTCC +
Preference number: 5 (lower is better)
Translates to: PLMLSDTNSITGIDAAAMLLPAM*LWSSHS
Trigger: GGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAG...CATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATCACTCAACATCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS GCA 90 bp AAGACTCGTATTTGTGACTGGTCTCCAAGGGCTGTGGCTGCATGCTaGTCGGGGATTCCTTTGCAGTTCCTGAGGAGGATATCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: KTRICDWSPRAVAAC*SGIPLQFLRRISSP
Trigger: GGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACCAGTCACAAATACGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS GCA 90 bp CCCAAGACTCGTATTTGTGACTGGTCTCCAAGGGCTGTGGCTGCATaGTGCTCGGGGATTCCTTTGCAGTTCCTGAGGAGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: PKTRICDWSPRAVAA*CSGIPLQFLRRISS
Trigger: AGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS-3UTR CAA 90 bp CTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTAATCTCGGACCTTTCTaGGATCTTGAGCGAACTCCT +
Preference number: 5 (lower is better)
Translates to: LTGTLSVAKGLCSSELASNLGPF*DLERTP
Trigger: AGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATT...ACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGAATCTCGGACCTTTCTaGGATCTTGAGCGAACTCCT +
Preference number: 5 (lower is better)
Translates to: AWLTGTLSVAKGLCSSELNLGPF*DLERTP
Trigger: AGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATT...CAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACTGGCCTCAGGTTTATaGGCGATAATCACAGAAATT +
Preference number: 5 (lower is better)
Translates to: GTLSVAKGLCSSELASVELASGL*AIITEI
Trigger: AATTTCTGTGATTATCGCCAATAAACCTGAGGCCAG...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAATTGGAAAGATTGGACTaGCTACAGAAGGTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GTLSVAKGLCSSELASVELERLD*LQKVFP
Trigger: TGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCCAA...TTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCAACAACAGGAGCGCTaGAAAGTTACGGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTQQQER*KVTVLL
Trigger: GAGAAGCACCGTAACTTTCAAGCGCTCCTGTTGTTG...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS TCA 90 bp ATCCCCTTTGAGCCCCTCTGCTTCAGAACCTTTCTGCTCATCTGCTaGTTCCTCGTGCTGGGTACTCAATCTGCAATCTCGGACCTTTCT +
Preference number: 5 (lower is better)
Translates to: IPFEPLCFRTFLLIC*FLVLGTQSAISDLS
Trigger: AGAAAGGTCCGAGATTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACCTCCTCACCAGACTCTaGGATGTACAGGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYLLTRL*DVQGPP
Trigger: TGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGAG...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCGAAATTATATCCCCTTaGAGCCCCTCTGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KVMLAWLTGTLSVAKGLCEIISP*SPSASE
Trigger: TTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTTC...GCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCCTTGGAGCCTGCCTCTaGAAGAGGGGGTTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: FNYAKGNAGMAYWDPKCGLGACL*KRGFCS
Trigger: GGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAAG...GCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGATTCTGTGGTGTTTATaGAAGTTGGAGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: NAGMAYWDPKCGEGTLLQILWCL*KLELWL
Trigger: CAACCACAGCTCCAACTTCAATAAACACCACAGAAT...CTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp CTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAATTGGAAAGATTGGACTaGCTACAGAAGGTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LAWLTGTLSVAKGLCSSELERLD*LQKVFP
Trigger: TGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCCAA...TTCACTGGAGCAGAGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTCTCCTGCCTGCCATGTaGCTGTGGAGCTCGCACTCC +
Preference number: 5 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSLLPAM*LWSSHS
Trigger: GGAGTGCGAGCTCCACAGCAACATGGCAGGCAGGAG...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTCTCCTCACCAGACTCTaGGATGTACAGGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: NSITGIDAAAMTRLLSGFLLTRL*DVQGPP
Trigger: TGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGAG...AAAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGACCTTTCTTGGATCTaGAGCGAACTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FNYAKGNAGMAYWDPKCGDLSWI*SELLLL
Trigger: GAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTC...GCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTTGGAGCCTGCCTCTaGAAGAGGGGGTTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTLGACL*KRGFCS
Trigger: GGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAAG...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGTGTGTTCTCCTGTGTTaGGTGAGATTTGAGCTATTA +
Preference number: 5 (lower is better)
Translates to: RDSAPVNWRVWNLLTPSECVLLC*VRFELL
Trigger: TAATAGCTCAAATCTCACCAAACACAGGAGAACACA...CTCAGAAGGTGTCAGGAGGTTCCACACTCGCCAGTTCACTGGAGCAGAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS-3UTR CAA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTGGAATATTCGTTCCTTaGGGTTTCCAGTTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTGIFVP*GFQFFR
Trigger: CCTAAAGAACTGGAAACCCAAAGGAACGAATATTCC...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTGTTCGTTTGGAGGAGTaGAGACCTGGTGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMAVRLEE*RPGVLA
Trigger: AGCCAGGACACCAGGTCTCAACTCCTCCAAACGAAC...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTATTCTGTGGTGTTTATaGAAGTTGGAGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: AKGNAGMAYWDPKCGEGTILWCL*KLELWL
Trigger: CAACCACAGCTCCAACTTCAATAAACACCACAGAAT...AGTCCCTTCGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTCCGGTTTCTGTTCGTTaGGAGGAGTTGAGACCTGGT +
Preference number: 5 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMAPVSVR*EELRPG
Trigger: ACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGG...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS TCA 90 bp AGCACATATATAACGTCTCTCTCCTGGGGTAGGTTTAGTAGGAACTaGTTCTCTACCTTTCTTGGAGCCTGCCTCTTGAAGAGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: STYITSLSWGRFSRN*FSTFLGACLLKRGF
Trigger: AAACCCCCTCTTCAAGAGGCAGGCTCCAAGAAAGGTAGAGAATCAGTTCCTACTAAACCTACCCCAGGAGAGAGACGTTATATATGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS GCA 90 bp ACAGAAATTATATCCCCTTTGAGCCCCTCTGCTTCAGAACCTTTCTaGTCATCTGCTGATTCCTCGTGCTGGGTACTCAATCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: TEIISPLSPSASEPF*SSADSSCWVLNLQS
Trigger: AGATTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp GATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTCCGGTTTCTGTTCGTTaGGAGGAGTTGAGACCTGGT +
Preference number: 5 (lower is better)
Translates to: DTNSITGIDAAAMTRLLSPVSVR*EELRPG
Trigger: ACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGG...AGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp TTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGTTGGAAAGATTGGACTaGCTACAGAAGGTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LTTQKVMLAWLTGTLSVALERLD*LQKVFP
Trigger: TGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCCAA...CGCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp TTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCATTCTGTGGTGTTTATaGAAGTTGGAGCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: FNYAKGNAGMAYWDPKCGILWCL*KLELWL
Trigger: CAACCACAGCTCCAACTTCAATAAACACCACAGAAT...GCCACACTTAGGGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCGGAATATTCGTTCCTTaGGGTTTCCAGTTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: IHVCLTTQKVMLAWLTGTGIFVP*GFQFFR
Trigger: CCTAAAGAACTGGAAACCCAAAGGAACGAATATTCC...GGTCCCAGTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTGAAATTATATCCCCTTaGAGCCCCTCTGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMAEIISP*SPSASE
Trigger: TTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTTC...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACGGAATATTCGTTCCTTaGGGTTTCCAGTTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: RLDTRLFNYAKGNAGMAYGIFVP*GFQFFR
Trigger: CCTAAAGAACTGGAAACCCAAAGGAACGAATATTCC...GTAAGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp AAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTGAAATTATATCCCCTTaGAGCCCCTCTGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KLYHRNRCCCNDKTSFWFEIISP*SPSASE
Trigger: TTCTGAAGCAGAGGGGCTCAAAGGGGATATAATTTC...AAACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTCTGGCCTCAGGTTTATaGGCGATAATCACAGAAATT +
Preference number: 5 (lower is better)
Translates to: TNSITGIDAAAMTRLLSGLASGL*AIITEI
Trigger: AATTTCTGTGATTATCGCCAATAAACCTGAGGCCAG...ACCAGAAAGAAGTCTTGTCATTGCAGCAGCATCGATTCCGGTGATAGAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp ACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTCTGGCCTCAGGTTTATaGGCGATAATCACAGAAATT +
Preference number: 5 (lower is better)
Translates to: TRLDTRLFNYAKGNAGMALASGL*AIITEI
Trigger: AATTTCTGTGATTATCGCCAATAAACCTGAGGCCAG...AGCCATGCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS-3UTR CAA 90 bp TCCTTAACTAGACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCTGTGTTCTCCTGTGTTaGGTGAGATTTGAGCTATTA +
Preference number: 5 (lower is better)
Translates to: SLTRLDTRLFNYAKGNAGCVLLC*VRFELL
Trigger: TAATAGCTCAAATCTCACCAAACACAGGAGAACACA...GCCAGCATTACCTTTTGCGTAGTTAAACAGACGTGTATCCAGTCTAGTTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2
CDS CCA 72 bp GGATGTACAGGGGCCCCCAAGACTCGTATTTGTGACTaGTCTCCAAGGGCTGTGGCTGCATGCTGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: GCTGAPKTRICD*SPRAVAACCSG
Trigger: CCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTGGGGGCCCCTGTACATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS TCA 72 bp GCTCATCCAGTTCCCGCTCCAGATCTTCGAGGAGAGTaGCAGCCTCTTCAGCGCTCTCCGGGCAATGCTCCT +
Preference number: 6 (lower is better)
Translates to: AHPVPAPDLRGE*QPLQRSPGNAP
Trigger: AGGAGCATTGCCCGGAGAGCGCTGAAGAGGCTGTCACTCTCCTCGAAGATCTGGAGCGGGAACTGGATGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
CDS TCA 72 bp TCTTGGATGTACAGGGGCCCCCAAGACTCGTATTTGTaGCTGGTCTCCAAGGGCTGTGGCTGCATGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SWMYRGPQDSYL*LVSKGCGCMLL
Trigger: GAGCAGCATGCAGCCACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTGGGGGCCCCTGTACATCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS GCA 72 bp CGTATTTGTGACTGGTCTCCAAGGGCTGTGGCTGCATaGTGCTCGGGGATTCCTTTGCAGTTCCTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: RICDWSPRAVAA*CSGIPLQFLRR
Trigger: CCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACCAGTCACAAATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS CCA 72 bp CACACCGGTTTCTGTTCGTTTGGAGGAGTTGAGACCTaGTGTCCTGGCTCATCCAGCACCAGTAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: HTGFCSFGGVET*CPGSSSTSSSR
Trigger: CCTGGAGCTACTGGTGCTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543588.2
CDS CAA 90 bp GACTGGTCTCCAAGGGCTGTGGCTGCATGCTGCTCGGGGATTCCTTaGCAGTTCCTGAGGAGGATATCTTCTCCCACACCGGTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: DWSPRAVAACCSGIP*QFLRRISSPTPVSV
Trigger: AACAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAGCCCTTGGAGACCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS CAA 90 bp AGGAGGATATCTTCTCCCACACCGGTTTCTGTTCGTTTGGAGGAGTaGAGACCTGGTGTCCTGGCTCATCCAGCACCAGTAGCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: RRISSPTPVSVRLEE*RPGVLAHPAPVAPG
Trigger: TCCTGGAGCTACTGGTGCTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGGTGTGGGAGAAGATATCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543588.2
CDS TCA 72 bp TGGCTGCATGCTGCTCGGGGATTCCTTTGCAGTTCCTaGGGAGGATATCTTCTCCCACACCGGTTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: WLHAARGFLCSS*GGYLLPHRFLF
Trigger: GAACAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS TCA 72 bp CCCAGTGTGTGTTCTCCTCGGACCTTTCTTGGATCTTaGGCGAACTCCTGCTCCTCACCAGACTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: PSVCSPRTFLGS*ANSCSSPDSWM
Trigger: CATCCAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGGAGAACACACACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477297.1
CDS CAA 72 bp CCCCAGTGTGTGTTCTCCTCGGACCTTTCTTGGATCTaGAGCGAACTCCTGCTCCTCACCAGACTCTTGGAT +
Preference number: 6 (lower is better)
Translates to: PQCVFSSDLSWI*SELLLLTRLLD
Trigger: ATCCAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGGAGAACACACACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477297.1
CDS CAA 72 bp TCTTCTCCCACACCGGTTTCTGTTCGTTTGGAGGAGTaGAGACCTGGTGTCCTGGCTCATCCAGCACCAGTA +
Preference number: 6 (lower is better)
Translates to: SSPTPVSVRLEE*RPGVLAHPAPV
Trigger: TACTGGTGCTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGGTGTGGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543588.2
CDS CAA 90 bp GACCTTTCTTGGATCTTGAGCGAACTCCTGCTCCTCACCAGACTCTaGGATGTACAGGGGCCCCCAAGACTCGTATTTGTGACTGGTCTC +
Preference number: 6 (lower is better)
Translates to: DLSWILSELLLLTRL*DVQGPPRLVFVTGL
Trigger: GAGACCAGTCACAAATACGAGTCTTGGGGGCCCCTGTACATCCAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS CAA 90 bp CAGTTCCTGAGGAGGATATCTTCTCCCACACCGGTTTCTGTTCGTTaGGAGGAGTTGAGACCTGGTGTCCTGGCTCATCCAGCACCAGTA +
Preference number: 6 (lower is better)
Translates to: QFLRRISSPTPVSVR*EELRPGVLAHPAPV
Trigger: TACTGGTGCTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543588.2
CDS CAA 72 bp AGGAGGATATCTTCTCCCACACCGGTTTCTGTTCGTTaGGAGGAGTTGAGACCTGGTGTCCTGGCTCATCCA +
Preference number: 6 (lower is better)
Translates to: RRISSPTPVSVR*EELRPGVLAHP
Trigger: TGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGGTGTGGGAGAAGATATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292450.9
ENST00000438937.1
ENST00000456748.6
ENST00000477297.1
ENST00000543588.2
CDS TCA 72 bp GTACTCAATCTGCAATCTCGGACCTTTCTTGGATCTTaGGCGAACTCCTGCTCCTCACCAGACTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: VLNLQSRTFLGS*ANSCSSPDSWM
Trigger: CATCCAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATTGCAGATTGAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS GCA 72 bp ATATCCCCTTTGAGCCCCTCTGCTTCAGAACCTTTCTaGTCATCTGCTGATTCCTCGTGCTGGGTACTCAAT +
Preference number: 6 (lower is better)
Translates to: ISPLSPSASEPF*SSADSSCWVLN
Trigger: ATTGAGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS CAA 72 bp GGTACTCAATCTGCAATCTCGGACCTTTCTTGGATCTaGAGCGAACTCCTGCTCCTCACCAGACTCTTGGAT +
Preference number: 6 (lower is better)
Translates to: GTQSAISDLSWI*SELLLLTRLLD
Trigger: ATCCAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATTGCAGATTGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292450.9
ENST00000456748.6
ENST00000543588.2
CDS TCA 72 bp ATAACGTCTCTCTCCTGGGGTAGGTTTAGTAGGAACTaGTTCTCTACCTTTCTTGGAGCCTGCCTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: ITSLSWGRFSRN*FSTFLGACLLK
Trigger: CTTCAAGAGGCAGGCTCCAAGAAAGGTAGAGAATCAGTTCCTACTAAACCTACCCCAGGAGAGAGACGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292450.9
ENST00000543588.2