RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZRANB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000019995

Ensembl transcript IDs: ENST00000359653.4, ENST00000471421.1

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGTCTCCTCACGCAGCAGAGGCATTATCTCCATAAGGTGTGTGTaGTCCAGGAAAACACTTCCCCGAGCAGATCCTGCCAGATTTGGT +
Preference number: 1 (lower is better)
Translates to: SVSSRSRGIISIRCV*SRKTLPRADPARFG
Trigger: ACCAAATCTGGCAGGATCTGCTCGGGGAAGTGTTTTCCTGGACCACACACACCTTATGGAGATAATGCCTCTGCTGCGTGAGGAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR TCA 90 bp GAAAACACTTCCCCGAGCAGATCCTGCCAGATTTGGTTCATTCCATaGTGTCGACTCTGCTTGGAGCACCACACTAACTTTAGGGTCATT +
Preference number: 1 (lower is better)
Translates to: ENTSPSRSCQIWFIP*CRLCLEHHTNFRVI
Trigger: AATGACCCTAAAGTTAGTGTGGTGCTCCAAGCAGAGTCGACATCATGGAATGAACCAAATCTGGCAGGATCTGCTCGGGGAAGTGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR TCA 90 bp AAAGGAGGCCAAGCGCACACAGAATATCTTACCTTCACGAATATGTaGAGAAGTCTGGGACACGATGAACCTAAGAGTCAAAAACATAAA +
Preference number: 1 (lower is better)
Translates to: KGGQAHTEYLTFTNM*RSLGHDEPKSQKHK
Trigger: TTTATGTTTTTGACTCTTAGGTTCATCGTGTCCCAGACTTCTTCACATATTCGTGAAGGTAAGATATTCTGTGTGCGCTTGGCCTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR CCA 90 bp AAGCGCACACAGAATATCTTACCTTCACGAATATGTGAAGAAGTCTaGGACACGATGAACCTAAGAGTCAAAAACATAAAAAGGCAGGTC +
Preference number: 1 (lower is better)
Translates to: KRTQNILPSRICEEV*DTMNLRVKNIKRQV
Trigger: GACCTGCCTTTTTATGTTTTTGACTCTTAGGTTCATCGTGTCCCAGACTTCTTCACATATTCGTGAAGGTAAGATATTCTGTGTGCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR TCA 90 bp GAGTCAGTCATTAATGTCTGTCACCTAGCCACGTATAATCATCTTTaGAAAAGGACTATATTCTATCTTGGGACAATAATTATGGCTGTT +
Preference number: 1 (lower is better)
Translates to: ESVINVCHLATYNHL*KRTIFYLGTIIMAV
Trigger: AACAGCCATAATTATTGTCCCAAGATAGAATATAGTCCTTTTTCAAAGATGATTATACGTGGCTAGGTGACAGACATTAATGACTGACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGGAGCAGCACATTGTTaGTGGAGTCCAAGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCARARVRVSSFQGAAHC*WSPSEH
Trigger: GTGCTCACTTGGACTCCATCAACAATGTGCTGCTCC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAAGTGACAAGTGGGCTTaGTCCCTTTTCATCCAGGAA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCARARVRVSSFQSDKWA*SLFIQE
Trigger: TTCCTGGATGAAAAGGGAGCAAGCCCACTTGTCACT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAATTTGGTTCATTCCATaGTGTCGACTCTGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCARARVRVSSFQIWFIP*CRLCLE
Trigger: CTCCAAGCAGAGTCGACATCATGGAATGAACCAAAT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACCACTGCCCAGAATCTaGAATAAGAACCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCARARVRVSSFQPLPRI*NKNPHF
Trigger: AAAATGAGGGTTCTTATTCCAGATTCTGGGCAGTGG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAGTGCGCGCGCGCGCGTaGGTGTGTCGTCTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRVRARA*VCRLSK
Trigger: TTTGGAAAGACGACACACGCACGCGCGCGCGCGCAC...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACCTAAAAGATTTGATTaGGCACAAGAGGAACGAAAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCARARVRVSSFQPKRFD*AQEERN
Trigger: ATTTCGTTCCTCTTGTGCCCAATCAAATCTTTTAGG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAACTGGACAACGCTGGCTaGAATGCAGACTGCAATGGC +
Preference number: 2 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQLDNAG*NADCNG
Trigger: GCCATTGCAGTCTGCATTGCAGCCAGCGTTGTCCAG...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCGGGTCATTACAGATCTaGTGCCTTGGTCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGGSLQI*CLGLLL
Trigger: CAGCAGAAGACCAAGGCATCAGATCTGTAATGACCC...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAAATCCGAAGACCCTCTaGCATGGCAATCTGGGAGCA +
Preference number: 2 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQNPKTL*HGNLGA
Trigger: TGCTCCCAGATTGCCATGCCAGAGGGTCTTCGGATT...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATCCCCGAGCAGATCCTaGCAGATTTGGTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRSPSRS*QIWFIP
Trigger: TGGAATGAACCAAATCTGGCAGGATCTGCTCGGGGA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGACAACGCTGGCTGCAATaGAGACTGCAATGGCTACAT +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRQRWLQ*RLQWLH
Trigger: ATGTAGCCATTGCAGTCTGCATTGCAGCCAGCGTTG...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATACTCTGGACAACGCTaGCTGCAATGCAGACTGCAA +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRYSGQR*LQCRLQ
Trigger: TTGCAGTCTGCATTGCAGCCAGCGTTGTCCAGAGTA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAACACAGGGAAGAATGCTaGACCTATCACACTATGTGG +
Preference number: 2 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQHREEC*TYHTMW
Trigger: CCACATAGTGTGATAGGTGCAGCATTCTTCCCTGTG...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATCCATAAGGTGTGTGTaGTCCAGGAAAACACTTCCC +
Preference number: 2 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQSIRCV*SRKTLP
Trigger: GGGAAGTGTTTTCCTGGACCACACACACCTTATGGA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATCTGGCATGGCAATCTaGGAGCAGCACATTGTTGAT +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRSGMAI*EQHIVD
Trigger: ATCAACAATGTGCTGCTCCCAGATTGCCATGCCAGA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGACTACTCACAGACCACTaGCCAGAATCTGGAATAAGA +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRLLTDH*PESGIR
Trigger: TCTTATTCCAGATTCTGGGCAGTGGTCTGTGAGTAG...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAGATGTCGACTCTGCTTaGAGCACCACACTAACTTTA +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRDVDSA*STTLTL
Trigger: TAAAGTTAGTGTGGTGCTCCAAGCAGAGTCGACATC...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGACAATGCAGACTGCAATaGCTACATGCTTTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRQCRLQ*LHAFPS
Trigger: AGAGGGAAAAGCATGTAGCCATTGCAGTCTGCATTG...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR TCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATTGATGGAGTCCAAGTaGGCACATTTCACACAATTC +
Preference number: 2 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQLMESK*AHFTQF
Trigger: GAATTGTGTGAAATGTGCTCACTTGGACTCCATCAA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR TCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATTAACAGCCAGTCTATaGAAACCATTTAGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQLTASL*KPFRAP
Trigger: TGGGGCTCTAAATGGTTTTCATAGACTGGCTGTTAA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAACCTATCACACTATGTaGTCAGGGTCACTGATTGAT +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRTYHTM*SGSLID
Trigger: ATCAATCAGTGACCCTGACCACATAGTGTGATAGGT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATTCTGGCAGCAAATTTaGGGTTGTACACATTTCATT +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRFWQQI*GCTHFI
Trigger: AATGAAATGTGTACAACCTCAAATTTGCTGCCAGAA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAAACACATTCACCACTTaGAACAAACAGCAGCATTTA +
Preference number: 2 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRNTFTT*NKQQHL
Trigger: TAAATGCTGCTGTTTGTTTCAAGTGGTGAATGTGTT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATCTTACACAACCACATaGGTTACATTTATAGACAGA +
Preference number: 2 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQSYTTT*VTFIDR
Trigger: TCTGTCTATAAATGTAACGCATGTGGTTGTGTAAGA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR GCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTaGGTGTGTCGTCTTTCCAAATTCCTGGCCACATCA +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVRARA*VCRLSKFLATS
Trigger: TGATGTGGCCAGGAATTTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR GCA 72 bp AAAAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAAT +
Preference number: 3 (lower is better)
Translates to: KNCVCVCVCVCV*ARARACVVFPN
Trigger: ATTTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACACACACACACAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR CCA 72 bp TCACGCAGCAGAGGCATTATCTCCATAAGGTGTGTGTaGTCCAGGAAAACACTTCCCCGAGCAGATCCTGCC +
Preference number: 3 (lower is better)
Translates to: SRSRGIISIRCV*SRKTLPRADPA
Trigger: GGCAGGATCTGCTCGGGGAAGTGTTTTCCTGGACCACACACACCTTATGGAGATAATGCCTCTGCTGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR TCA 72 bp CTCACCAGACCACAACACACAGTAGAAGCTAAGTGCTaGGCGTGTACTCTGGACAACGCTGGCTGCAATGCA +
Preference number: 3 (lower is better)
Translates to: LTRPQHTVEAKC*ACTLDNAGCNA
Trigger: TGCATTGCAGCCAGCGTTGTCCAGAGTACACGCTCAGCACTTAGCTTCTACTGTGTGTTGTGGTCTGGTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR GCA 72 bp GTGCTGAGCGTGTACTCTGGACAACGCTGGCTGCAATaGAGACTGCAATGGCTACATGCTTTTCCCTCTAAC +
Preference number: 3 (lower is better)
Translates to: VLSVYSGQRWLQ*RLQWLHAFPSN
Trigger: GTTAGAGGGAAAAGCATGTAGCCATTGCAGTCTGCATTGCAGCCAGCGTTGTCCAGAGTACACGCTCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR GCA 72 bp TGGTGTCTTAAAGCCTTTGGCTTGCCTGGCCTTGTCTaGTCACTCATTTTAAGGTGGTGGCCCCATCCCAAC +
Preference number: 3 (lower is better)
Translates to: WCLKAFGLPGLV*SLILRWWPHPN
Trigger: GTTGGGATGGGGCCACCACCTTAAAATGAGTGAGCAGACAAGGCCAGGCAAGCCAAAGGCTTTAAGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAATTGTTCCTAAAAGATTaGATTGGGCACAAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCARARVRVSSFQLFLKD*IGHKRN
Trigger: GTTCCTCTTGTGCCCAATCAAATCTTTTAGGAACAA...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR TCA 72 bp TCCCCGAGCAGATCCTGCCAGATTTGGTTCATTCCATaGTGTCGACTCTGCTTGGAGCACCACACTAACTTT +
Preference number: 3 (lower is better)
Translates to: SPSRSCQIWFIP*CRLCLEHHTNF
Trigger: AAAGTTAGTGTGGTGCTCCAAGCAGAGTCGACATCATGGAATGAACCAAATCTGGCAGGATCTGCTCGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR GCA 72 bp ATGGAACCATCTTTAATTCTTTCCCACAGGGAAGAATaGTGCACCTATCACACTATGTGGTCAGGGTCACTG +
Preference number: 3 (lower is better)
Translates to: MEPSLILSHREE*CTYHTMWSGSL
Trigger: CAGTGACCCTGACCACATAGTGTGATAGGTGCAGCATTCTTCCCTGTGGGAAAGAATTAAAGATGGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CAA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAACAGATCCTGCCAGATTaGGTTCATTCCATGATGTCG +
Preference number: 3 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQQILPD*VHSMMS
Trigger: CGACATCATGGAATGAACCAAATCTGGCAGGATCTG...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR GCA 72 bp GAACCATCTTTAATTCTTTCCCACAGGGAAGAATGCTaGACCTATCACACTATGTGGTCAGGGTCACTGATT +
Preference number: 3 (lower is better)
Translates to: EPSLILSHREEC*TYHTMWSGSLI
Trigger: AATCAGTGACCCTGACCACATAGTGTGATAGGTGCAGCATTCTTCCCTGTGGGAAAGAATTAAAGATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR TCA 72 bp CAAGCGCACACAGAATATCTTACCTTCACGAATATGTaGAGAAGTCTGGGACACGATGAACCTAAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: QAHTEYLTFTNM*RSLGHDEPKSQ
Trigger: TTGACTCTTAGGTTCATCGTGTCCCAGACTTCTTCACATATTCGTGAAGGTAAGATATTCTGTGTGCGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR-3UTR CAA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATACAGATCTGATGCCTaGGTCTTCTGCTGTTTGATT +
Preference number: 3 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQYRSDA*VFCCLI
Trigger: AATCAAACAGCAGAAGACCAAGGCATCAGATCTGTA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACGTCTGCTCCAAGCTTaGTCCAGGCTGACTAGCAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQRLLQA*SRLTSK
Trigger: CTTGCTAGTCAGCCTGGAGCAAGCTTGGAGCAGACG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGTACTTCATCTGCGGTaGGCTGACGTGCAATGTCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQVLHLR*ADVQCL
Trigger: GAGACATTGCACGTCAGCTCACCGCAGATGAAGTAC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGGCTTTCCGAAGCACTaGGTCCTTGTCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQGFPKH*VLVIDA
Trigger: GGCATCTATGACAAGGACTCAGTGCTTCGGAAAGCC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAAGCCTTTGGCTTGCCTaGCCTTGTCTGCTCACTCAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQSLWLA*PCLLTH
Trigger: ATGAGTGAGCAGACAAGGCCAGGCAAGCCAAAGGCT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGCAATGAAATATGCGTaGAAAGGAGGCCAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQAMKYA*KGGQAH
Trigger: GTGCGCTTGGCCTCCTTTTCACGCATATTTCATTGC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGGCTATTACCACTACTaGAACTTCCCCTCCATCGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQGYYHY*NFPSIE
Trigger: CTCGATGGAGGGGAAGTTGCAGTAGTGGTAATAGCC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAACAAAAATGTGCGTCTaGTCCAAGCTTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQTKMCV*SKLAPG
Trigger: GCCTGGAGCAAGCTTGGAGCAGACGCACATTTTTGT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACAACGCTGGCTGCAATaGAGACTGCAATGGCTACAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQQRWLQ*RLQWLH
Trigger: ATGTAGCCATTGCAGTCTGCATTGCAGCCAGCGTTG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAAAGCTTGCTCCAGGCTaGCTAGCAAGAGAGAGTATA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQKLAPG*LARESI
Trigger: TATACTCTCTCTTGCTAGTCAGCCTGGAGCAAGCTT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGTTCCACTAGGTCTTTaGGCACGACACATAGTACAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQVPLGL*ARHIVH
Trigger: GTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAAC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACACTTTGCTGCTTGTTaGGACACCTCTGTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQHFAAC*DTSVSN
Trigger: ATTGCTTACAGAGGTGTCTCAACAAGCAGCAAAGTG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACCTCCAAAAATACGCTaGCCAAAAAGCAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQPPKIR*PKSKSF
Trigger: GAAGGACTTGCTTTTTGGGCAGCGTATTTTTGGAGG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAATGCTGGAATACACTTTaGTGCTTGTTGAGACACCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQCWNTL*CLLRHL
Trigger: GAGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCA...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAAATGCCCAGTCTTCTTaGCACTGTTCTTCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQNAQSS*HCSSLK
Trigger: CTTGAGAGAAGAACAGTGGCAAGAAGACTGGGCATT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGGAGGTGATCTCCTTTaGCTATTACCACTACTGCAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQGGDLL*LLPLLQ
Trigger: TTGCAGTAGTGGTAATAGCCAAAGGAGATCACCTCC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAGATGTCGACTCTGCTTaGAGCACCACACTAACTTTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQDVDSA*STTLTL
Trigger: TAAAGTTAGTGTGGTGCTCCAAGCAGAGTCGACATC...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTGTGCGCGCGCGCGCGTaGGTGTGTCGTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSVRARA*VCRLSK
Trigger: TTTGGAAAGACGACACACGCACGCGCGCGCGCGCAC...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAAGCCTCTTCAGTCTCTaGCAATTCTATTGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQSLFSL*QFYCFN
Trigger: ATTGAAGCAATAGAATTGGCAGAGACTGAAGAGGCT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAATTATTAGGTCTGGGATaGTCACAAACAACACATCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQLLGLG*SQTTHL
Trigger: AAGATGTGTTGTTTGTGATCATCCCAGACCTAATAA...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACATAGTACACTTGATTaGAGATGGCCAGTTTTCATA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQHSTLD*RWPVFI
Trigger: TATGAAAACTGGCCATCTGCAATCAAGTGTACTATG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
3UTR CAA 72 bp CCAGGAAAACACTTCCCCGAGCAGATCCTGCCAGATTaGGTTCATTCCATGATGTCGACTCTGCTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGKHFPEQILPD*VHSMMSTLLGA
Trigger: TGCTCCAAGCAGAGTCGACATCATGGAATGAACCAAATCTGGCAGGATCTGCTCGGGGAAGTGTTTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAATCAAATAATTTTTCTTaGACTGTTGGGGGCAAATCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCARARVRVSSFQSNNFS*TVGGKS
Trigger: AGATTTGCCCCCAACAGTCCAAGAAAAATTATTTGA...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCCGCCGAGAACTCTTCTaGATGGCAACCAGAACTCCC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGRRELF*MATRTP
Trigger: GGGAGTTCTGGTTGCCATGCAGAAGAGTTCTCGGCG...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCCTGGACAACGCTGGCTaGAATGCAGACTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGLDNAG*NADCNG
Trigger: GCCATTGCAGTCTGCATTGCAGCCAGCGTTGTCCAG...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCGAAGACCCTCTGGCATaGCAATCTGGGAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGEDPLA*QSGSST
Trigger: TGTGCTGCTCCCAGATTGCCATGCCAGAGGGTCTTC...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCGTGCACTTCTTGAAGTaGGCTGTGTCAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGVHFLK*AVSGRK
Trigger: CTTCCTGCCTGACACAGCTCACTTCAAGAAGTGCAC...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTAGCACTGGGTACATCTaGTTGCTCTTGGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSSTGYI*LLLASS
Trigger: TGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCT...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATCATCTGCGGTGAGCTaGCGTGCAATGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRSSAVS*RAMSPP
Trigger: AGGAGGAGACATTGCACGTCAGCTCACCGCAGATGA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTGGGTCATTACAGATCTaGTGCCTTGGTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSGSLQI*CLGLLL
Trigger: CAGCAGAAGACCAAGGCATCAGATCTGTAATGACCC...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCGGAGCAGCACATTGTTaGTGGAGTCCAAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGGAAHC*WSPSEH
Trigger: GTGCTCACTTGGACTCCATCAACAATGTGCTGCTCC...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTCATGCAGGCTGTCATaGAGGGCTTTCCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGSCRLS*RAFRST
Trigger: AGTGCTTCGGAAAGCCCTGCATGACAGCCTGCATGA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCAATGTGAACAGTCATaGAGGCTGTCATGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSQCEQS*RLSCRA
Trigger: AGCCCTGCATGACAGCCTGCATGACTGTTCACATTG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCACCAGCACCTCGGTTaGCATAGCCATCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSHQHLG*HSHHFP
Trigger: TGGAAAATGATGGCTATGGCAACCGAGGTGCTGGTG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCTCCTGGTCCTACGTTaGGATAAGCACTGGGTACAT +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLLVLR*DKHWVH
Trigger: ATGTACCCAGTGCTTATCCCAACGTAGGACCAGGAG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCAATCCGAAGACCCTCTaGCATGGCAATCTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGNPKTL*HGNLGA
Trigger: TGCTCCCAGATTGCCATGCCAGAGGGTCTTCGGATT...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTACTCTGGACAACGCTaGCTGCAATGCAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSYSGQR*LQCRLQ
Trigger: TTGCAGTCTGCATTGCAGCCAGCGTTGTCCAGAGTA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAGCTGAGCGTGTACTCTaGACAACGCTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRAERVL*TTLAAM
Trigger: CATTGCAGCCAGCGTTGTCCAGAGTACACGCTCAGC...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCTCATTTTAAGGTGGTaGCCCCATCCCAACTCTACC +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLILRW*PHPNST
Trigger: GGTAGAGTTGGGATGGGGCCACCACCTTAAAATGAG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGACCAGATCCTGAGGACTaGGGAGATTCTGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRPDPED*GDSVGL
Trigger: GAGTCCTACAGAATCTCCTCAGTCCTCAGGATCTGG...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGACCCCCACACAAGCATTaGGGAAGAGCCAATCAGTCT +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRPPHKH*GRANQS
Trigger: AGACTGATTGGCTCTTCCTCAATGCTTGTGTGGGGG...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCAGTCCAGCCACTCCCTaGGCAGTTTTTCTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGSPATP*AVFLAV
Trigger: AACAGCAAGAAAAACTGCTCAGGGAGTGGCTGGACT...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATTTCTACCATCTGAGTaGCCAGGGGGTGATTTCGCC +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQFLPSE*PGGDFA
Trigger: GGCGAAATCACCCCCTGGTCACTCAGATGGTAGAAA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAGGCGCTCATAGTTACTaGCCTATTACCCCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRGAHSY*PITPGN
Trigger: GTTCCCTGGGGTAATAGGTCAGTAACTATGAGCGCC...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTACTTCCTCCTTCGGTaGTGGAAGGATCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGYFLLR*WKDPNL
Trigger: GAGATTGGGATCCTTCCAGCACCGAAGGAGGAAGTA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTCCCACAGGGAAGAATaGTGCACCTATCACACTATG +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSSHREE*CTYHTM
Trigger: CATAGTGTGATAGGTGCAGCATTCTTCCCTGTGGGA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTCTGGCATGGCAATCTaGGAGCAGCACATTGTTGAT +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSSGMAI*EQHIVD
Trigger: ATCAACAATGTGCTGCTCCCAGATTGCCATGCCAGA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTCACTCATTTTAAGGTaGTGGCCCCATCCCAACTCT +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSSLILR*WPHPNS
Trigger: AGAGTTGGGATGGGGCCACCACCTTAAAATGAGTGA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAACTTCGTAGCAGGAGGTaGTCTCCTTTGGCTATTACC +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQLRSRR*SPLAIT
Trigger: GGTAATAGCCAAAGGAGATCACCTCCTGCTACGAAG...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAGTAGAAGCTAAGTGCTaGGCGTGTACTCTGGACAAC +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRVEAKC*ACTLDN
Trigger: GTTGTCCAGAGTACACGCTCAGCACTTAGCTTCTAC...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAATAAAAAGGCAGGTCTaGATCCATGGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRIKRQV*IHGPPG
Trigger: CCCAGGTGGACCATGGATTCAGACCTGCCTTTTTAT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCGCCAGTACAAAAATGTaGGTCTGCTCCAAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGASTKM*VCSKLA
Trigger: AGCAAGCTTGGAGCAGACGCACATTTTTGTACTGGC...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCTACTCACAGACCACTaGCCAGAATCTGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLLTDH*PESGIR
Trigger: TCTTATTCCAGATTCTGGGCAGTGGTCTGTGAGTAG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCCACAGGGAAGAATGCTaGACCTATCACACTATGTGG +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGHREEC*TYHTMW
Trigger: CCACATAGTGTGATAGGTGCAGCATTCTTCCCTGTG...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTATCAAGTCCACAGAGTaGAGGTATGACTTACTCTCC +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSIKSTE*RYDLLS
Trigger: GGAGAGTAAGTCATACCTGCACTCTGTGGACTTGAT...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATTCCTCCTTCGGTGCTaGAAGGATCCCAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQFLLRC*KDPNLY
Trigger: GTAGAGATTGGGATCCTTCCAGCACCGAAGGAGGAA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTAGGACACACCATTGCTaGAATACACTTTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSRTHHC*NTLCCL
Trigger: CAAGCAGCAAAGTGTATTCCAGCAATGGTGTGTCCT...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTCCATAAGGTGTGTGTaGTCCAGGAAAACACTTCCC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGSIRCV*SRKTLP
Trigger: GGGAAGTGTTTTCCTGGACCACACACACCTTATGGA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAGCTCTGAGAATACCATaGTTCCCAATCTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQALRIP*FPIFPA
Trigger: CGCTGGAAAGATTGGGAATCATGGTATTCTCAGAGC...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATCATTACCTAGCTCCTaGGCAGAAAGGAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRSLPSS*AERKCT
Trigger: TGTGCACTTCCTTTCTGCTCAGGAGCTAGGTAATGA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTTGATGGAGTCCAAGTaGGCACATTTCACACAATTC +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLMESK*AHFTQF
Trigger: GAATTGTGTGAAATGTGCTCACTTGGACTCCATCAA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTTAACAGCCAGTCTATaGAAACCATTTAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLTASL*KPFRAP
Trigger: TGGGGCTCTAAATGGTTTTCATAGACTGGCTGTTAA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCACCTTCACGAATATGTaGAGAAGTCTGGGACACGAT +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGTFTNM*RSLGHD
Trigger: ATCGTGTCCCAGACTTCTTCACATATTCGTGAAGGT...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAACAGAGCAAGTCCAGTaGTGTGTCCTAGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRTEQVQ*CVLVFS
Trigger: ACTGAACACTAGGACACAGCACTGGACTTGCTCTGT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCCCAGTTTTCATATGTaGAAACAGAGCAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSPSFHM*KQSKSS
Trigger: ACTGGACTTGCTCTGTTTGCACATATGAAAACTGGG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAAGTCCGGTTCCAAAGTaGATACAGTCGACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQSPVPK*IQSTVQ
Trigger: TTGGACAGTCGACTGTATGCACTTTGGAACCGGACT...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAAGTGACAAGTGGGCTTaGTCCCTTTTCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRSDKWA*SLFIQE
Trigger: TTCCTGGATGAAAAGGGAGCAAGCCCACTTGTCACT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAGGCTGCAATGCAGACTaGAATGGCTACATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQGCNAD*NGYMLF
Trigger: GAAAAGCATGTAGCCATTGCAGTCTGCATTGCAGCC...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATTGCCTGGCCTTGTCTaGTCACTCATTTTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRLPGLV*SLILRW
Trigger: CCACCTTAAAATGAGTGAGCAGACAAGGCCAGGCAA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAACGAAGATTTCACCCTTaGTCTTGCACTAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQRRFHP*SCTRVW
Trigger: CCAGACTCTAGTGCAAGACCAAGGGTGAAATCTTCG...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAAGCATATCCTGCCTCTaGAAACGTATAGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRSISCL*KRIAKC
Trigger: ACACTTGGCTATACGTTTTCAGAGGCAGGATATGCT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATGTGTAAAACCAATGTaGACAGTCATGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRCVKPM*TVMQAV
Trigger: GACAGCCTGCATGACTGTTCACATTGGTTTTACACA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAATTTGGTTCATTCCATaGTGTCGACTCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQIWFIP*CRLCLE
Trigger: CTCCAAGCAGAGTCGACATCATGGAATGAACCAAAT...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCCTGGGTACATCTGATTaGTCTTGGCCAGTTCAAATA +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGLGTSD*SWPVQI
Trigger: TATTTGAACTGGCCAAGAGCAATCAGATGTACCCAG...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATTCAGGACACACCATTaGTGGAATACACTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQFRTHH*WNTLCC
Trigger: GCAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAGAAAGGAAGTGCACATaGAGTAGCTTCCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQERKCT*SSFLSL
Trigger: CAGTGAAAGGAAGCTACTCCATGTGCACTTCCTTTC...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAACAATGCAGACTGCAATaGCTACATGCTTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQQCRLQ*LHAFPS
Trigger: AGAGGGAAAAGCATGTAGCCATTGCAGTCTGCATTG...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAGCAGGTCTGAATCCATaGTCCACCTGGGTTTTAATT +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQAGLNP*STWVLI
Trigger: AATTAAAACCCAGGTGGACCATGGATTCAGACCTGC...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCCTTAATTCCACGTTCTaGCATTGTGCACTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGLNSTF*HCALLE
Trigger: TTCAAGAAGTGCACAATGTCAGAACGTGGAATTAAG...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATTTCACCCTTGGTCTTaGACTAGAGTCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQFHPWS*TRVWTY
Trigger: ATATGTCCAGACTCTAGTGCAAGACCAAGGGTGAAA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAATGCCACGCTCTGTTTaGTCTAGAAAAAGAACCATC +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRMPRSV*SRKRTI
Trigger: GATGGTTCTTTTTCTAGAGCAAACAGAGCGTGGCAT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCACACTTGATTGCAGATaGCCAGTTTTCATACGTACA +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGTLDCR*PVFIRT
Trigger: TGTACGTATGAAAACTGGCCATCTGCAATCAAGTGT...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTCTTGCACTAGAGTCTaGACATATCAAAGGACTACT +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGSCTRV*TYQRTT
Trigger: AGTAGTCCTTTGATATGTCCAGACTCTAGTGCAAGA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTACATCTGATTGCTCTTaGCCAGTTCAAATATGTACA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSTSDCS*PVQICT
Trigger: TGTACATATTTGAACTGGCCAAGAGCAATCAGATGT...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGACCACTGCCCAGAATCTaGAATAAGAACCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRPLPRI*NKNPHF
Trigger: AAAATGAGGGTTCTTATTCCAGATTCTGGGCAGTGG...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTTTGGCTTTTTCAATTaGGAGGGCAGATTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSFGFFN*EGRFCL
Trigger: TAAGCAAAATCTGCCCTCCCAATTGAAAAAGCCAAA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTCTACCAACATCACTTaGACCACTTTTAAATGGATC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGSTNIT*TTFKWI
Trigger: GATCCATTTAAAAGTGGTTCAAGTGATGTTGGTAGA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTTGCTCATTTATTATTaGAGAAGCCTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGLLIYY*RSLFSL
Trigger: GAGACTGAAGAGGCTTCTTCAATAATAAATGAGCAA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTCTTCTAATTCTTTTTaGACGTCTCTATCAAGCACC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGSSNSF*TSLSST
Trigger: GGTGCTTGATAGAGACGTTCAAAAAGAATTAGAAGA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR TCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATGTAAACCAAAGCTCTaGGAATACCATGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQCKPKL*EYHDSQ
Trigger: TTGGGAATCATGGTATTCTCAGAGCTTTGGTTTACA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCTCTGCCAATTCTATTaGTTCAATGTTATTAGGTCT +
Preference number: 4 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLCQFY*FNVIRS
Trigger: AGACCTAATAACATTGAAGCAATAGAATTGGCAGAG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTTTTTCTTGGACTGTTaGGGGCAAATCTTCAATATC +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGFFLDC*GQIFNI
Trigger: GATATTGAAGATTTGCCCCCAACAGTCCAAGAAAAA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCCCTAAAAGATTTGATTaGGCACAAGAGGAACGAAAT +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGPKRFD*AQEERN
Trigger: ATTTCGTTCCTCTTGTGCCCAATCAAATCTTTTAGG...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATCGTCTAAGAATATGTaGCAGTACAAAAATGTGCGT +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQSSKNM*QYKNVR
Trigger: ACGCACATTTTTGTACTGGCACATATTCTTAGACGA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAACTTGTATGCTTCTATaGCAGCTAAATCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQTCMLL*QLNHLL
Trigger: TAGAAGGTGATTTAGCTGCCATAGAAGCATACAAGT...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATCTAACAATTCTCTTTaGCTTTTTCAATTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQSNNSL*LFQLGG
Trigger: CCCTCCCAATTGAAAAAGCCAAAGAGAATTGTTAGA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCAATCCATGGTCCACCTaGGTTTTAATTATTAGATCT +
Preference number: 4 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGNPWST*VLIIRS
Trigger: AGATCTAATAATTAAAACCCAGGTGGACCATGGATT...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAATATTTGCATTTTCCATaGTATACGAAGATTTCACCC +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQYLHFP*YTKISP
Trigger: GGGTGAAATCTTCGTATAGCATGGAAAATGCAAATA...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGACATCGAGCTCTGTCTTaGTCATTTATTATTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRHRALS*SFIIEE
Trigger: TTCTTCAATAATAAATGAGCAAGACAGAGCTCGATG...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR GCA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGATCTTACACAACCACATaGGTTACATTTATAGACAGA +
Preference number: 4 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRSYTTT*VTFIDR
Trigger: TCTGTCTATAAATGTAACGCATGTGGTTGTGTAAGA...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CCA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAAAATATGTACACATGTaGCATGACCACTTATTTGCA +
Preference number: 4 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQKYVHM*HDHLFA
Trigger: TGCAAATAAGTGGTCATGCCACATGTGTACATATTT...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp GCCGGATCTGTCGGTAGCGGTCAAGCCATTTTTCTACCATCTGAGTaGCCAGGGGGTGATTTCGCCGCCGAGAACTCTTCTGCATGGCAA +
Preference number: 5 (lower is better)
Translates to: AGSVGSGQAIFLPSE*PGGDFAAENSSAWQ
Trigger: TTGCCATGCAGAAGAGTTCTCGGCGGCGAAATCACCCCCTGGTCACTCAGATGGTAGAAAAATGGCTTGACCGCTACCGACAGATCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAACAGATCCTGCCAGATTaGGTTCATTCCATGATGTCG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCARARVRVSSFQQILPD*VHSMMS
Trigger: CGACATCATGGAATGAACCAAATCTGGCAGGATCTG...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAATATCTCTCTCCGGATTaGTTCTGTCAGTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCARARVRVSSFQYLSPD*FCQFRT
Trigger: TGTCCTGAACTGACAGAACAAATCCGGAGAGAGATA...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAACACATCTTTTAGCCTaGGCCCAGTTTTCATATGTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCARARVRVSSFQTHLLA*AQFSYV
Trigger: CACATATGAAAACTGGGCCAAGGCTAAAAGATGTGT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAAATACACTTTGCTGCTaGTTGAGACACCTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCARARVRVSSFQNTLCC*LRHLCK
Trigger: CTTACAGAGGTGTCTCAACAAGCAGCAAAGTGTATT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAATACAGATCTGATGCCTaGGTCTTCTGCTGTTTGATT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCARARVRVSSFQYRSDA*VFCCLI
Trigger: AATCAAACAGCAGAAGACCAAGGCATCAGATCTGTA...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCGTGTGTCGTCTTTCCAAATTCTGGCAGCAAATTaGAGGTTGTACACATTTCAT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCARARVRVSSFQILAAN*RLYTFH
Trigger: ATGAAATGTGTACAACCTCAAATTTGCTGCCAGAAT...TTGGAAAGACGACACACGCACGCGCGCGCGCGCACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp AAGGCAGAAGGACGATTCAGCAAGCGTACTTCATCTGCGGTGAGCTaGCGTGCAATGTCTCCTCCTGATGACTTGTATGCTTCTATGGCA +
Preference number: 5 (lower is better)
Translates to: KAEGRFSKRTSSAVS*RAMSPPDDLYASMA
Trigger: TGCCATAGAAGCATACAAGTCATCAGGAGGAGACATTGCACGTCAGCTCACCGCAGATGAAGTACGCTTGCTGAATCGTCCTTCTGCCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 90 bp ATTTTCACTTCAGAGTCCCGCTTCGTAGCAGGAGGTGATCTCCTTTaGCTATTACCACTACTGCAACTTCCCCTCCATCGAGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: IFTSESRFVAGGDLL*LLPLLQLPLHRALS
Trigger: AGACAGAGCTCGATGGAGGGGAAGTTGCAGTAGTGGTAATAGCCAAAGGAGATCACCTCCTGCTACGAAGCGGGACTCTGAAGTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTACTTCAAGTTCCTCCTaGCTTCCCACAGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSTSSSS*LPTAPA
Trigger: GGCTGGTGCTGTGGGAAGCAAGGAGGAACTTGAAGT...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp TCAAGTTCCTCCTTGCTTCCCACAGCACCAGCCAATTCAATCCTCTaGAAATCCATTTTCACTTCAGAGTCCCGCTTCGTAGCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SSSSLLPTAPANSIL*KSIFTSESRFVAGG
Trigger: ACCTCCTGCTACGAAGCGGGACTCTGAAGTGAAAATGGATTTTCAGAGGATTGAATTGGCTGGTGCTGTGGGAAGCAAGGAGGAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp CATCAAAGGCAGAAGGACGATTCAGCAAGCGTACTTCATCTGCGGTaGGCTGACGTGCAATGTCTCCTCCTGATGACTTGTATGCTTCTA +
Preference number: 5 (lower is better)
Translates to: HQRQKDDSASVLHLR*ADVQCLLLMTCMLL
Trigger: TAGAAGCATACAAGTCATCAGGAGGAGACATTGCACGTCAGCTCACCGCAGATGAAGTACGCTTGCTGAATCGTCCTTCTGCCTTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTACCCCCACACAAGCATaGAGGAAGAGCCAATCAGTC +
Preference number: 5 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSTPTQA*RKSQSV
Trigger: GACTGATTGGCTCTTCCTCAATGCTTGTGTGGGGGT...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCTTAAAGCCTTTGGCTaGCCTGGCCTTGTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLKAFG*PGLVCS
Trigger: TGAGCAGACAAGGCCAGGCAAGCCAAAGGCTTTAAG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCGGTGTCTTAAAGCCTTaGGCTTGCCTGGCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGGVLKP*ACLALS
Trigger: AGACAAGGCCAGGCAAGCCAAAGGCTTTAAGACACC...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 90 bp TTCCATGCTATACGAAGATTTCACCCTTGGTCTTGCACTAGAGTCTaGACATATCAAAGGACTACTTCCTCCTTCGGTGCTGGAAGGATC +
Preference number: 5 (lower is better)
Translates to: FHAIRRFHPWSCTRV*TYQRTTSSFGAGRI
Trigger: GATCCTTCCAGCACCGAAGGAGGAAGTAGTCCTTTGATATGTCCAGACTCTAGTGCAAGACCAAGGGTGAAATCTTCGTATAGCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTGTTCCACTAGGTCTTaGGGCACGACACATAGTACA +
Preference number: 5 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSCSTRS*GTTHST
Trigger: TGTACTATGTGTCGTGCCCAAAGACCTAGTGGAACA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTTCTCCTCCTGATGACTaGTATGCTTCTATGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSSPPDD*YASMAA
Trigger: AGCTGCCATAGAAGCATACAAGTCATCAGGAGGAGA...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTGTTCAGGACACACCATaGCTGGAATACACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSVQDTP*LEYTLL
Trigger: CAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAAC...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 90 bp AGCTATCTCTCTCCGGATTTGTTCTGTCAGTTCAGGACACACCATTaGTGGAATACACTTTGCTGCTTGTTGAGACACCTCTGTAAGCAA +
Preference number: 5 (lower is better)
Translates to: SYLSPDLFCQFRTHH*WNTLCCLLRHLCKQ
Trigger: TTGCTTACAGAGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAACTGACAGAACAAATCCGGAGAGAGATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 90 bp TGGCTATTACCACTACTGCAACTTCCCCTCCATCGAGCTCTGTCTTaGTCATTTATTATTGAAGAAGCCTCTTCAGTCTCTGCCAATTCT +
Preference number: 5 (lower is better)
Translates to: WLLPLLQLPLHRALS*SFIIEEASSVSANS
Trigger: AGAATTGGCAGAGACTGAAGAGGCTTCTTCAATAATAAATGAGCAAGACAGAGCTCGATGGAGGGGAAGTTGCAGTAGTGGTAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAAAAAAGCAACTGGTCTaGAGCCAGATCCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQKKQLV*SQILRT
Trigger: AGTCCTCAGGATCTGGCTCAAGACCAGTTGCTTTTT...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTTGCTGGAATACACTTaGCTGCTTGTTGAGACACCT +
Preference number: 5 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGLLEYT*LLVETP
Trigger: AGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCAA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp GTTTTCATACGTACAATATTCACAAGCCCACTTAATTCCACGTTCTaGCATTGTGCACTTCTTGAAGTGAGCTGTGTCAGGCAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: VFIRTIFTSPLNSTF*HCALLEVSCVRQEA
Trigger: AGCTTCCTGCCTGACACAGCTCACTTCAAGAAGTGCACAATGTCAGAACGTGGAATTAAGTGGGCTTGTGAATATTGTACGTATGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 90 bp TCCACTAGGTCTTTGGGCACGACACATAGTACACTTGATTGCAGATaGCCAGTTTTCATACGTACAATATTCACAAGCCCACTTAATTCC +
Preference number: 5 (lower is better)
Translates to: STRSLGTTHSTLDCR*PVFIRTIFTSPLNS
Trigger: GGAATTAAGTGGGCTTGTGAATATTGTACGTATGAAAACTGGCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 90 bp TATCTCTCTCCGGATTTGTTCTGTCAGTTCAGGACACACCATTGCTaGAATACACTTTGCTGCTTGTTGAGACACCTCTGTAAGCAATAT +
Preference number: 5 (lower is better)
Translates to: YLSPDLFCQFRTHHC*NTLCCLLRHLCKQY
Trigger: ATATTGCTTACAGAGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAACTGACAGAACAAATCCGGAGAGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAACGACACATAGTACACTaGATTGCAGATGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQRHIVH*IADGQF
Trigger: AAACTGGCCATCTGCAATCAAGTGTACTATGTGTCG...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAACATCATCATCGGTATaGAGATTAGCACCAGCACCT +
Preference number: 5 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQTSSSV*RLAPAP
Trigger: AGGTGCTGGTGCTAATCTCAATACCGATGATGATGT...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCCTTTGGCTTTTTCAATaGGGAGGGCAGATTTTGCTT +
Preference number: 5 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGLWLFQ*GGQILL
Trigger: AAGCAAAATCTGCCCTCCCAATTGAAAAAGCCAAAG...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp TCCTCCTTCGGTGCTGGAAGGATCCCAATCTCTACCAACATCACTTaGACCACTTTTAAATGGATCTTCTGTAATAATTGTTCCACTAGG +
Preference number: 5 (lower is better)
Translates to: SSFGAGRIPISTNIT*TTFKWIFCNNCSTR
Trigger: CCTAGTGGAACAATTATTACAGAAGATCCATTTAAAAGTGGTTCAAGTGATGTTGGTAGAGATTGGGATCCTTCCAGCACCGAAGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp ACTGCAACTTCCCCTCCATCGAGCTCTGTCTTGCTCATTTATTATTaGAGAAGCCTCTTCAGTCTCTGCCAATTCTATTGCTTCAATGTT +
Preference number: 5 (lower is better)
Translates to: TATSPPSSSVLLIYY*RSLFSLCQFYCFNV
Trigger: AACATTGAAGCAATAGAATTGGCAGAGACTGAAGAGGCTTCTTCAATAATAAATGAGCAAGACAGAGCTCGATGGAGGGGAAGTTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 90 bp AATTGTTCCACTAGGTCTTTGGGCACGACACATAGTACACTTGATTaGAGATGGCCAGTTTTCATACGTACAATATTCACAAGCCCACTT +
Preference number: 5 (lower is better)
Translates to: NCSTRSLGTTHSTLD*RWPVFIRTIFTSPL
Trigger: AAGTGGGCTTGTGAATATTGTACGTATGAAAACTGGCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 90 bp CTTATTTGCATTTTCCATGCTATACGAAGATTTCACCCTTGGTCTTaGACTAGAGTCTGGACATATCAAAGGACTACTTCCTCCTTCGGT +
Preference number: 5 (lower is better)
Translates to: LICIFHAIRRFHPWS*TRVWTYQRTTSSFG
Trigger: ACCGAAGGAGGAAGTAGTCCTTTGATATGTCCAGACTCTAGTGCAAGACCAAGGGTGAAATCTTCGTATAGCATGGAAAATGCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp CTGAATCCATGGTCCACCTGGGTTTTAATTATTAGATCTTGGTCGCCCAAACAAGGCATGACCACTTATTaGCATTTTCCATGCTATACG +
Preference number: 5 (lower is better)
Translates to: LNPWSTWVLIIRSWSPKQGMTTY*HFPCYT
Trigger: CGTATAGCATGGAAAATGCAAATAAGTGGTCATGCC...TTGTTTGGGCGACCAAGATCTAATAATTAAAACCCAGGTGGACCATGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TGCTTGGAGCACCACACTAACTTTAGGGTCATTACAGATCTGATGCCTTGGTCTCTTGCTCATTTATTATaGAAGAAGCCTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: CLEHHTNFRVITDLMPWSLAHLL*KKPLQS
Trigger: AGACTGAAGAGGCTTCTTCAATAATAAATGAGCAAG...AGACCAAGGCATCAGATCTGTAATGACCCTAAAGTTAGTGTGGTGCTCCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 90 bp TTAGCCTTGGCCCAGTTTTCATATGTGCAAACAGAGCAAGTCCAGTaGTGTGTCCTAGTGTTCAGTTTATTTCTATCATTGTATTCCTCA +
Preference number: 5 (lower is better)
Translates to: LALAQFSYVQTEQVQ*CVLVFSLFLSLYSS
Trigger: TGAGGAATACAATGATAGAAATAAACTGAACACTAGGACACAGCACTGGACTTGCTCTGTTTGCACATATGAAAACTGGGCCAAGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TTTTTACAAACTGTAGTCCAACTAAAGTTCTCTGTCTCCTCACGCAGCAGAGGCTTATTCTGTAGTGAATaGGTATTCCCAATCTGCCTA +
Preference number: 5 (lower is better)
Translates to: FLQTVVQLKFSVSSRSRGLFCSE*VFPICL
Trigger: TAGGCAGATTGGGAATACCAATTCACTACAGAATAA...GCCTCTGCTGCGTGAGGAGACAGAGAACTTTAGTTGGACTACAGTTTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 90 bp GTAATATTTTACTCCATAAACTATAATTGGTCGTCTAAGAATATGTaGCAGTACAAAAATGTGCGTCTGCTCCAAGCTTGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VIFYSINYNWSSKNM*QYKNVRLLQACSRL
Trigger: CAGCCTGGAGCAAGCTTGGAGCAGACGCACATTTTTGTACTGGCACATATTCTTAGACGACCAATTATAGTTTATGGAGTAAAATATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359653.4
ENST00000471421.1
CDS CCA 90 bp CCACTTTTAAATGGATCTTCTGTAATAATTGTTCCACTAGGTCTTTaGGCACGACACATAGTACACTTGATTGCAGATGGCCAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PLLNGSSVIIVPLGL*ARHIVHLIADGQFS
Trigger: TGAAAACTGGCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAACAATTATTACAGAAGATCCATTTAAAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 90 bp TGGGTACATCTGATTGCTCTTGGCCAGTTCAAATATGTACACATGTaGCATGACCACTTATTTGCATTTTCCATGCTATACGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: WVHLIALGQFKYVHM*HDHLFAFSMLYEDF
Trigger: GAAATCTTCGTATAGCATGGAAAATGCAAATAAGTGGTCATGCCACATGTGTACATATTTGAACTGGCCAAGAGCAATCAGATGTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS-3UTR CAA 90 bp TCTAGAAAAAGAACCATCAAGTCCACAGAGTGCAGGTATGACTTACTCTCCAGAATTTTTCTTGGACTGTaGGGGGCAAATCTTCAATAT +
Preference number: 5 (lower is better)
Translates to: SRKRTIKSTECRYDLLSRIFLGL*GANLQY
Trigger: ATATTGAAGATTTGCCCCCAACAGTCCAAGAAAAAT...TCTGGAGAGTAAGTCATACCTGCACTCTGTGGACTTGATGGTTCTTTTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 90 bp GAACTTTGGAATGCAAAAGAGATAGGCAGGAGATATAACGAGGTTTaGTCTAAGAAGGATGAGATTAACGGGAAGCCACTAATAGAAATG +
Preference number: 5 (lower is better)
Translates to: ELWNAKEIGRRYNEV*SKKDEINGKPLIEM
Trigger: CATTTCTATTAGTGGCTTCCCGTTAATCTCATCCTTCTTAGATCAAACCTCGTTATATCTCCTGCCTATCTCTTTTGCATTCCAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 72 bp GTCGGTAGCGGTCAAGCCATTTTTCTACCATCTGAGTaGCCAGGGGGTGATTTCGCCGCCGAGAACTCTTCT +
Preference number: 6 (lower is better)
Translates to: VGSGQAIFLPSE*PGGDFAAENSS
Trigger: AGAAGAGTTCTCGGCGGCGAAATCACCCCCTGGTCACTCAGATGGTAGAAAAATGGCTTGACCGCTACCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 72 bp TCAGAGTCCCGCTTCGTAGCAGGAGGTGATCTCCTTTaGCTATTACCACTACTGCAACTTCCCCTCCATCGA +
Preference number: 6 (lower is better)
Translates to: SESRFVAGGDLL*LLPLLQLPLHR
Trigger: TCGATGGAGGGGAAGTTGCAGTAGTGGTAATAGCCAAAGGAGATCACCTCCTGCTACGAAGCGGGACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 72 bp GGACGATTCAGCAAGCGTACTTCATCTGCGGTGAGCTaGCGTGCAATGTCTCCTCCTGATGACTTGTATGCT +
Preference number: 6 (lower is better)
Translates to: GRFSKRTSSAVS*RAMSPPDDLYA
Trigger: AGCATACAAGTCATCAGGAGGAGACATTGCACGTCAGCTCACCGCAGATGAAGTACGCTTGCTGAATCGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 72 bp CAGAAGGACGATTCAGCAAGCGTACTTCATCTGCGGTaGGCTGACGTGCAATGTCTCCTCCTGATGACTTGT +
Preference number: 6 (lower is better)
Translates to: QKDDSASVLHLR*ADVQCLLLMTC
Trigger: ACAAGTCATCAGGAGGAGACATTGCACGTCAGCTCACCGCAGATGAAGTACGCTTGCTGAATCGTCCTTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 72 bp CATTTTCACTTCAGAGTCCCGCTTCGTAGCAGGAGGTaGTCTCCTTTGGCTATTACCACTACTGCAACTTCC +
Preference number: 6 (lower is better)
Translates to: HFHFRVPLRSRR*SPLAITTTATS
Trigger: GGAAGTTGCAGTAGTGGTAATAGCCAAAGGAGATCACCTCCTGCTACGAAGCGGGACTCTGAAGTGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 72 bp GCTTGCTCCAGGCTGACTAGCAAGAGAGAGTATAAATaGCCAGTCTTCTTGCCACTGTTCTTCTCTCAAGGA +
Preference number: 6 (lower is better)
Translates to: ACSRLTSKREYK*PVFLPLFFSQG
Trigger: TCCTTGAGAGAAGAACAGTGGCAAGAAGACTGGGCATTTATACTCTCTCTTGCTAGTCAGCCTGGAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359653.4
ENST00000471421.1
CDS CAA 90 bp ATCCCCCTTTCTCTGATGAAGAGAGGCAGCTATCTCTCTCCGGATTaGTTCTGTCAGTTCAGGACACACCATTGCTGGAATACACTTTGC +
Preference number: 6 (lower is better)
Translates to: IPLSLMKRGSYLSPD*FCQFRTHHCWNTLC
Trigger: GCAAAGTGTATTCCAGCAATGGTGTGTCCTGAACTGACAGAACAAATCCGGAGAGAGATAGCTGCCTCTCTTCATCAGAGAAAGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 72 bp AGTCTGGACATATCAAAGGACTACTTCCTCCTTCGGTaGTGGAAGGATCCCAATCTCTACCAACATCACTTG +
Preference number: 6 (lower is better)
Translates to: SLDISKDYFLLR*WKDPNLYQHHL
Trigger: CAAGTGATGTTGGTAGAGATTGGGATCCTTCCAGCACCGAAGGAGGAAGTAGTCCTTTGATATGTCCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 72 bp CTGGACATATCAAAGGACTACTTCCTCCTTCGGTGCTaGAAGGATCCCAATCTCTACCAACATCACTTGAAC +
Preference number: 6 (lower is better)
Translates to: LDISKDYFLLRC*KDPNLYQHHLN
Trigger: GTTCAAGTGATGTTGGTAGAGATTGGGATCCTTCCAGCACCGAAGGAGGAAGTAGTCCTTTGATATGTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 72 bp GTGCAATGTCTCCTCCTGATGACTTGTATGCTTCTATaGCAGCTAAATCACCTTCTACAACCCCCACACAAG +
Preference number: 6 (lower is better)
Translates to: VQCLLLMTCMLL*QLNHLLQPPHK
Trigger: CTTGTGTGGGGGTTGTAGAAGGTGATTTAGCTGCCATAGAAGCATACAAGTCATCAGGAGGAGACATTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 72 bp CCGGATTTGTTCTGTCAGTTCAGGACACACCATTGCTaGAATACACTTTGCTGCTTGTTGAGACACCTCTGT +
Preference number: 6 (lower is better)
Translates to: PDLFCQFRTHHC*NTLCCLLRHLC
Trigger: ACAGAGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAACTGACAGAACAAATCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 72 bp CTCTCCGGATTTGTTCTGTCAGTTCAGGACACACCATaGCTGGAATACACTTTGCTGCTTGTTGAGACACCT +
Preference number: 6 (lower is better)
Translates to: LSGFVLSVQDTP*LEYTLLLVETP
Trigger: AGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAACTGACAGAACAAATCCGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 72 bp TCCTGGTCCTACGTTGGGATAAGCACTGGGTACATCTaGTTGCTCTTGGCCAGTTCAAATATGTACACATGT +
Preference number: 6 (lower is better)
Translates to: SWSYVGISTGYI*LLLASSNMYTC
Trigger: ACATGTGTACATATTTGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCTTATCCCAACGTAGGACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 72 bp TGTCAGTTCAGGACACACCATTGCTGGAATACACTTTaGTGCTTGTTGAGACACCTCTGTAAGCAATATTGC +
Preference number: 6 (lower is better)
Translates to: CQFRTHHCWNTL*CLLRHLCKQYC
Trigger: GCAATATTGCTTACAGAGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAACTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 72 bp GTTCCACTAGGTCTTTGGGCACGACACATAGTACACTaGATTGCAGATGGCCAGTTTTCATACGTACAATAT +
Preference number: 6 (lower is better)
Translates to: VPLGLWARHIVH*IADGQFSYVQY
Trigger: ATATTGTACGTATGAAAACTGGCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 72 bp TTCCCCTCCATCGAGCTCTGTCTTGCTCATTTATTATaGAAGAAGCCTCTTCAGTCTCTGCCAATTCTATTG +
Preference number: 6 (lower is better)
Translates to: FPSIELCLAHLL*KKPLQSLPILL
Trigger: CAATAGAATTGGCAGAGACTGAAGAGGCTTCTTCAATAATAAATGAGCAAGACAGAGCTCGATGGAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 90 bp CTCTTGGCCAGTTCAAATATGTACACATGTGGCATGACCACTTATTaGCATTTTCCATGCTATACGAAGATTTCACCCTTGGTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: LLASSNMYTCGMTTY*HFPCYTKISPLVLH
Trigger: GTGCAAGACCAAGGGTGAAATCTTCGTATAGCATGGAAAATGCAAATAAGTGGTCATGCCACATGTGTACATATTTGAACTGGCCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 90 bp TACTGCAACTTCCCCTCCATCGAGCTCTGTCTTGCTCATTTATTATaGAAGAAGCCTCTTCAGTCTCTGCCAATTCTATTGCTTCAATGT +
Preference number: 6 (lower is better)
Translates to: YCNFPSIELCLAHLL*KKPLQSLPILLLQC
Trigger: ACATTGAAGCAATAGAATTGGCAGAGACTGAAGAGGCTTCTTCAATAATAAATGAGCAAGACAGAGCTCGATGGAGGGGAAGTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 72 bp GCCAATTCTATTGCTTCAATGTTATTAGGTCTGGGATaGTCACAAACAACACATCTTTTAGCCTTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: ANSIASMLLGLG*SQTTHLLALAQ
Trigger: CTGGGCCAAGGCTAAAAGATGTGTTGTTTGTGATCATCCCAGACCTAATAACATTGAAGCAATAGAATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 72 bp ACTAGGTCTTTGGGCACGACACATAGTACACTTGATTaGAGATGGCCAGTTTTCATACGTACAATATTCACA +
Preference number: 6 (lower is better)
Translates to: TRSLGTTHSTLD*RWPVFIRTIFT
Trigger: TGTGAATATTGTACGTATGAAAACTGGCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 72 bp AATGGATCTTCTGTAATAATTGTTCCACTAGGTCTTTaGGCACGACACATAGTACACTTGATTGCAGATGGC +
Preference number: 6 (lower is better)
Translates to: NGSSVIIVPLGL*ARHIVHLIADG
Trigger: GCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAACAATTATTACAGAAGATCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 90 bp GTAATAATTGTTCCACTAGGTCTTTGGGCACGACACATAGTACACTaGATTGCAGATGGCCAGTTTTCATACGTACAATATTCACAAGCC +
Preference number: 6 (lower is better)
Translates to: VIIVPLGLWARHIVH*IADGQFSYVQYSQA
Trigger: GGCTTGTGAATATTGTACGTATGAAAACTGGCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAACAATTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 90 bp ACCACTTTTAAATGGATCTTCTGTAATAATTGTTCCACTAGGTCTTaGGGCACGACACATAGTACACTTGATTGCAGATGGCCAGTTTTC +
Preference number: 6 (lower is better)
Translates to: TTFKWIFCNNCSTRS*GTTHSTLDCRWPVF
Trigger: GAAAACTGGCCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAACAATTATTACAGAAGATCCATTTAAAAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS TCA 72 bp AATGCAAAAGAGATAGGCAGGAGATATAACGAGGTTTaGTCTAAGAAGGATGAGATTAACGGGAAGCCACTA +
Preference number: 6 (lower is better)
Translates to: NAKEIGRRYNEV*SKKDEINGKPL
Trigger: TAGTGGCTTCCCGTTAATCTCATCCTTCTTAGATCAAACCTCGTTATATCTCCTGCCTATCTCTTTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS GCA 72 bp TACTCCATAAACTATAATTGGTCGTCTAAGAATATGTaGCAGTACAAAAATGTGCGTCTGCTCCAAGCTTGC +
Preference number: 6 (lower is better)
Translates to: YSINYNWSSKNM*QYKNVRLLQAC
Trigger: GCAAGCTTGGAGCAGACGCACATTTTTGTACTGGCACATATTCTTAGACGACCAATTATAGTTTATGGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359653.4
ENST00000471421.1
CDS CCA 72 bp ATTTGCATTTTCCATGCTATACGAAGATTTCACCCTTaGTCTTGCACTAGAGTCTGGACATATCAAAGGACT +
Preference number: 6 (lower is better)
Translates to: ICIFHAIRRFHP*SCTRVWTYQRT
Trigger: AGTCCTTTGATATGTCCAGACTCTAGTGCAAGACCAAGGGTGAAATCTTCGTATAGCATGGAAAATGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CCA 72 bp CTGATTGCTCTTGGCCAGTTCAAATATGTACACATGTaGCATGACCACTTATTTGCATTTTCCATGCTATAC +
Preference number: 6 (lower is better)
Translates to: LIALGQFKYVHM*HDHLFAFSMLY
Trigger: GTATAGCATGGAAAATGCAAATAAGTGGTCATGCCACATGTGTACATATTTGAACTGGCCAAGAGCAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 72 bp AAATGGATCTTCTGTAATAATTGTTCCACTAGGTCTTaGGGCACGACACATAGTACACTTGATTGCAGATGG +
Preference number: 6 (lower is better)
Translates to: KWIFCNNCSTRS*GTTHSTLDCRW
Trigger: CCATCTGCAATCAAGTGTACTATGTGTCGTGCCCAAAGACCTAGTGGAACAATTATTACAGAAGATCCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359653.4
CDS CAA 72 bp AGTTCAAATATGTACACATGTGGCATGACCACTTATTaGCATTTTCCATGCTATACGAAGATTTCACCCTTG +
Preference number: 6 (lower is better)
Translates to: SSNMYTCGMTTY*HFPCYTKISPL
Trigger: CAAGGGTGAAATCTTCGTATAGCATGGAAAATGCAAATAAGTGGTCATGCCACATGTGTACATATTTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359653.4