Pregenerated sensors for ZNRF3-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000235786

Ensembl transcript IDs: ENST00000412798.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCACTCACCACAATCACTCTCTGTGTTCAGGGGAAGAAGAGGATTTaGTTCTATGTAGTACACATAGACCATGAGTTTCTTCCAGCTGAA	+
Preference number: 5 (lower is better) Translates to: SLTTITLCVQGKKRI*FYVVHIDHEFLPAE Trigger: TTCAGCTGGAAGAAACTCATGGTCTATGTGTACTACATAGAATCAAATCCTCTTCTTCCCCTGAACACAGAGAGTGATTGTGGTGAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412798.1
CDS CCA 90 bp	CTTCCTAGTCTATACTCTTTTCTGGACAAGCTCATTCTGGACTCCTaGTTTGAATACACACTCCCCTATCTAATGACTTCTCAACCTTCA	+
Preference number: 5 (lower is better) Translates to: LPSLYSFLDKLILDS*FEYTLPYLMTSQPS Trigger: TGAAGGTTGAGAAGTCATTAGATAGGGGAGTGTGTATTCAAACCAGGAGTCCAGAATGAGCTTGTCCAGAAAAGAGTATAGACTAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412798.1
CDS CCA 72 bp	CACTCTGTAAAACCTGCCCAACTCCTCCAGTCCACGTaGACTCACTTTTCACTCACCACAATCACTCTCTGT	+
Preference number: 6 (lower is better) Translates to: HSVKPAQLLQST*THFSLTTITLC Trigger: ACAGAGAGTGATTGTGGTGAGTGAAAAGTGAGTCCACGTGGACTGGAGGAGTTGGGCAGGTTTTACAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412798.1
CDS TCA 72 bp	CTCTTTTCTGGACAAGCTCATTCTGGACTCCTGGTTTaGATACACACTCCCCTATCTAATGACTTCTCAACC	+
Preference number: 6 (lower is better) Translates to: LFSGQAHSGLLV*IHTPLSNDFST Trigger: GGTTGAGAAGTCATTAGATAGGGGAGTGTGTATTCAAACCAGGAGTCCAGAATGAGCTTGTCCAGAAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412798.1
CDS CCA 72 bp	CTATACTCTTTTCTGGACAAGCTCATTCTGGACTCCTaGTTTGAATACACACTCCCCTATCTAATGACTTCT	+
Preference number: 6 (lower is better) Translates to: LYSFLDKLILDS*FEYTLPYLMTS Trigger: AGAAGTCATTAGATAGGGGAGTGTGTATTCAAACCAGGAGTCCAGAATGAGCTTGTCCAGAAAAGAGTATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412798.1
CDS TCA 72 bp	ACAATCACTCTCTGTGTTCAGGGGAAGAAGAGGATTTaGTTCTATGTAGTACACATAGACCATGAGTTTCTT	+
Preference number: 6 (lower is better) Translates to: TITLCVQGKKRI*FYVVHIDHEFL Trigger: AAGAAACTCATGGTCTATGTGTACTACATAGAATCAAATCCTCTTCTTCCCCTGAACACAGAGAGTGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412798.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu