Pregenerated sensors for ZNF883 (Homo sapiens)
Ensembl gene IDs: ENSG00000228623Ensembl transcript IDs: ENST00000638622.1, ENST00000638823.1, ENST00000639196.1, ENST00000639709.1, ENST00000640409.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTCTCTCCACCGGTGTCAGAGATCACCAACCCGGAGTCCTAGGCTaGTCCCTCATCTCGGGCCTGGAGACAGCGATCAACTTTGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: PLSTGVRDHQPGVLG*SLISGLETAINFGQ Trigger: TTGACCAAAGTTGATCGCTGTCTCCAGGCCCGAGATGAGGGAGCAGCCTAGGACTCCGGGTTGGTGATCTCTGACACCGGTGGAGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CCA 90 bp | ATCTTTGGGTGCAAACCCCTAATGCTTTTGGAAGGCACTGGTCCCTaGGCCACCCTCTCTCCACCGGTGTCAGAGATCACCAACCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: IFGCKPLMLLEGTGP*ATLSPPVSEITNPE Trigger: CTCCGGGTTGGTGATCTCTGACACCGGTGGAGAGAGGGTGGCCCAGGGACCAGTGCCTTCCAAAAGCATTAGGGGTTTGCACCCAAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CCA 90 bp | TTATGGTATCTTTGGGTGCAAACCCCTAATGCTTTTGGAAGGCACTaGTCCCTGGGCCACCCTCTCTCCACCGGTGTCAGAGATCACCAA | + |
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Preference number: 5 (lower is better) Translates to: LWYLWVQTPNAFGRH*SLGHPLSTGVRDHQ Trigger: TTGGTGATCTCTGACACCGGTGGAGAGAGGGTGGCCCAGGGACCAGTGCCTTCCAAAAGCATTAGGGGTTTGCACCCAAAGATACCATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS TCA 90 bp | TGGGCATGCGACACTTCCAGCACCTTGATGTGTAGACCAATCCAATaGGATGAGGCTGTAACAGTTTTTGAAGATCACATCCATGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: WACDTSSTLMCRPIQ*DEAVTVFEDHIHVP Trigger: TGGCACATGGATGTGATCTTCAAAAACTGTTACAGCCTCATCTCATTGGATTGGTCTACACATCAAGGTGCTGGAAGTGTCGCATGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000638622.1 ENST00000639196.1 |
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| CDS TCA 90 bp | GGAAGGTCTGTGAAGAGGTTGGATGAGGAATCTACTGAAGTTTGGTaGAGATCAGTGATTGACAGCATCTCTGCAGCTGAAAAATCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GRSVKRLDEESTEVW*RSVIDSISAAEKSE Trigger: CTCAGATTTTTCAGCTGCAGAGATGCTGTCAATCACTGATCTTCACCAAACTTCAGTAGATTCCTCATCCAACCTCTTCACAGACCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS TCA 90 bp | ACTGTGATGAAATCTTGTGTGATCTGCTCTGTCCTGCCTGGGCTGTaGATCATTTCTTTGTCTGGTGTATCTACACTCTATGTACTACCC | + |
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Preference number: 5 (lower is better) Translates to: TVMKSCVICSVLPGL*IISLSGVSTLYVLP Trigger: GGGTAGTACATAGAGTGTAGATACACCAGACAAAGAAATGATTCACAGCCCAGGCAGGACAGAGCAGATCACACAAGATTTCATCACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS TCA 90 bp | CCTTATCAATCCCATGTTCTTCACAATATTTCACAAACCTCTCCTTaGGTTGTGAGCTCACATCCGGTGTTCGAACATAGAGCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PYQSHVLHNISQTSP*VVSSHPVFEHRAPA Trigger: TGCTGGAGCTCTATGTTCGAACACCGGATGTGAGCTCACAACTCAAGGAGAGGTTTGTGAAATATTGTGAAGAACATGGGATTGATAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639709.1 ENST00000640409.1 |
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| CDS TCA 90 bp | AGGGAAGATCCTAAAGATGCAGGGATGACGTCTTCATGTGTGATATaGTGGAAATCAGGTCACAGAACTTGTCATAAGAGGACATGGGGA | + |
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Preference number: 5 (lower is better) Translates to: REDPKDAGMTSSCVI*WKSGHRTCHKRTWG Trigger: TCCCCATGTCCTCTTATGACAAGTTCTGTGACCTGATTTCCATCATATCACACATGAAGACGTCATCCCTGCATCTTTAGGATCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000639709.1 ENST00000640409.1 |
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| CDS CCA 90 bp | TCTGAGTACTGTGATGAAATCTTGTGTGATCTGCTCTGTCCTGCCTaGGCTGTGAATCATTTCTTTGTCTGGTGTATCTACACTCTATGT | + |
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Preference number: 5 (lower is better) Translates to: SEYCDEILCDLLCPA*AVNHFFVWCIYTLC Trigger: ACATAGAGTGTAGATACACCAGACAAAGAAATGATTCACAGCCCAGGCAGGACAGAGCAGATCACACAAGATTTCATCACAGTACTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS CCA 90 bp | CCCATTGTCTCCTTTTTAAGTCTTAGGTTATTTGCTCAAAGCTTATaGGAGAATTGGGTCCTCTATCCAGGTCTTCCAACTCCAGATTTC | + |
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Preference number: 5 (lower is better) Translates to: PIVSFLSLRLFAQSL*ENWVLYPGLPTPDF Trigger: GAAATCTGGAGTTGGAAGACCTGGATAGAGGACCCAATTCTCCCATAAGCTTTGAGCAAATAACCTAAGACTTAAAAAGGAGACAATGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CCA 90 bp | GAAATGTGGATTATAAGTTGGAGGGTGAGATGGCCTCCTGGGAGTTaGTCCACAAACACAGAAACATATTTGAGTTTCATACAACCTACT | + |
|
Preference number: 5 (lower is better) Translates to: EMWIISWRVRWPPGS*STNTETYLSFIQPT Trigger: AGTAGGTTGTATGAAACTCAAATATGTTTCTGTGTTTGTGGACCAACTCCCAGGAGGCCATCTCACCCTCCAACTTATAATCCACATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CCA 90 bp | AGAAGAAGAAATGTGGATTATAAGTTGGAGGGTGAGATGGCCTCCTaGGAGTTGGTCCACAAACACAGAAACATATTTGAGTTTCATACA | + |
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Preference number: 5 (lower is better) Translates to: RRRNVDYKLEGEMAS*ELVHKHRNIFEFHT Trigger: TGTATGAAACTCAAATATGTTTCTGTGTTTGTGGACCAACTCCCAGGAGGCCATCTCACCCTCCAACTTATAATCCACATTTCTTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS TCA 90 bp | ACATGCAGTGATTTTATAGTATTCTATTGGGTAGATATACAGTCTTaGGGAAGGAGCAGACTGCCATCTTTGGTGTTTCTCAGGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: TCSDFIVFYWVDIQS*GRSRLPSLVFLRLH Trigger: ATGAAGCCTGAGAAACACCAAAGATGGCAGTCTGCTCCTTCCTCAAGACTGTATATCTACCCAATAGAATACTATAAAATCACTGCATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639196.1 |
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| CDS TCA 90 bp | GATCATGTAGAGTCAGGTGTTATTCATGTAGAGTTCCCCTGGCTGTaGCAAAGACAGTCAGAAATTCAAAGAAAACCTTTGATTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: DHVESGVIHVEFPWL*QRQSEIQRKPLILG Trigger: ACCAAGAATCAAAGGTTTTCTTTGAATTTCTGACTGTCTTTGTCACAGCCAGGGGAACTCTACATGAATAACACCTGACTCTACATGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CCA 90 bp | GTCATAGTTACAGTAGTCCTGCCTTATCCACAGTTCCACTTCCCATaGTTTCAGTTATCCATGGGAAACTGTGGTCAAAAATATTATATG | + |
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Preference number: 5 (lower is better) Translates to: VIVTVVLPYPQFHFP*FQLSMGNCGQKYYM Trigger: CATATAATATTTTTGACCACAGTTTCCCATGGATAACTGAAACCATGGGAAGTGGAACTGTGGATAAGGCAGGACTACTGTAACTATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS CCA 90 bp | TCCTGCCTTATCCACAGTTCCACTTCCCATGGTTTCAGTTATCCATaGGAAACTGTGGTCAAAAATATTATATGGAAAATTCCAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: SCLIHSSTSHGFSYP*ETVVKNIIWKIPEI Trigger: TATTTCTGGAATTTTCCATATAATATTTTTGACCACAGTTTCCCATGGATAACTGAAACCATGGGAAGTGGAACTGTGGATAAGGCAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS CCA 90 bp | AGAATTGTTCCTTGTGTAGTCTTTGATGGTGCAGCATTCCTTGTGTaGACATGCAGTGATTTTATAGTATTCTATTGGGTAGATATACAG | + |
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Preference number: 5 (lower is better) Translates to: RIVPCVVFDGAAFLV*TCSDFIVFYWVDIQ Trigger: CTGTATATCTACCCAATAGAATACTATAAAATCACTGCATGTCCACACAAGGAATGCTGCACCATCAAAGACTACACAAGGAACAATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639196.1 |
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| CDS GCA 72 bp | ACCGGTGTCAGAGATCACCAACCCGGAGTCCTAGGCTaGTCCCTCATCTCGGGCCTGGAGACAGCGATCAAC | + |
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Preference number: 6 (lower is better) Translates to: TGVRDHQPGVLG*SLISGLETAIN Trigger: GTTGATCGCTGTCTCCAGGCCCGAGATGAGGGAGCAGCCTAGGACTCCGGGTTGGTGATCTCTGACACCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CCA 72 bp | GCTCCACCGAAAAATAAAGAGCACGGTCGGGCGATGTaGTTCCCAAGCCAGGAAGTACGCCTGCGCACGCGG | + |
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Preference number: 6 (lower is better) Translates to: APPKNKEHGRAM*FPSQEVRLRTR Trigger: CCGCGTGCGCAGGCGTACTTCCTGGCTTGGGAACCACATCGCCCGACCGTGCTCTTTATTTTTCGGTGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638622.1 |
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| CDS GCA 72 bp | CTCATCACTCATTCACTCAGCACCGGAGTCCTAGGCTaGTCCCTCATCTCGGGCCTGGAGACAGCGATCAAC | + |
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Preference number: 6 (lower is better) Translates to: LITHSLSTGVLG*SLISGLETAIN Trigger: GTTGATCGCTGTCTCCAGGCCCGAGATGAGGGAGCAGCCTAGGACTCCGGTGCTGAGTGAATGAGTGATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639709.1 |
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| CDS CCA 72 bp | TGCAAACCCCTAATGCTTTTGGAAGGCACTGGTCCCTaGGCCACCCTCTCTCCACCGGTGTCAGAGATCACC | + |
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Preference number: 6 (lower is better) Translates to: CKPLMLLEGTGP*ATLSPPVSEIT Trigger: GGTGATCTCTGACACCGGTGGAGAGAGGGTGGCCCAGGGACCAGTGCCTTCCAAAAGCATTAGGGGTTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS TCA 72 bp | GGAAAGGGCCCAGTCTCTGCTTCTAAGATGGCACCTTaGACACTGCATCCTCTTGAGGAGTGGGAGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: GKGPVSASKMAP*TLHPLEEWEEH Trigger: GTGTTCCTCCCACTCCTCAAGAGGATGCAGTGTTCAAGGTGCCATCTTAGAAGCAGAGACTGGGCCCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS CCA 72 bp | TGGTGTCTGGAAAGGGCCCAGTCTCTGCTTCTAAGATaGCACCTTGAACACTGCATCCTCTTGAGGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WCLERAQSLLLR*HLEHCILLRSG Trigger: CCCACTCCTCAAGAGGATGCAGTGTTCAAGGTGCCATCTTAGAAGCAGAGACTGGGCCCTTTCCAGACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS CAA 72 bp | TCCCAGCTACTCAGGAGGCTGCTACAGGATAATCATTaGAACCCAGGAGAGGGAGGTTGCAGCGAGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SQLLRRLLQDNH*NPGEGGCSELR Trigger: TCTCAGCTCGCTGCAACCTCCCTCTCCTGGGTTCAAATGATTATCCTGTAGCAGCCTCCTGAGTAGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS GCA 72 bp | GCCCAGTCTCTGCTTCTAAGATGGCACCTTGAACACTaGATCCTCTTGAGGAGTGGGAGGAACACCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: AQSLLLRWHLEH*ILLRSGRNTIC Trigger: ACAAATGGTGTTCCTCCCACTCCTCAAGAGGATGCAGTGTTCAAGGTGCCATCTTAGAAGCAGAGACTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS CAA 72 bp | TTTTATGGTATCTTTGGGTGCAAACCCCTAATGCTTTaGGAAGGCACTGGTCCCTGGGCCACCCTCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FYGIFGCKPLML*EGTGPWATLSP Trigger: TGGAGAGAGGGTGGCCCAGGGACCAGTGCCTTCCAAAAGCATTAGGGGTTTGCACCCAAAGATACCATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CAA 90 bp | CCAAATTATTTTTATGGTATCTTTGGGTGCAAACCCCTAATGCTTTaGGAAGGCACTGGTCCCTGGGCCACCCTCTCTCCACCGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PNYFYGIFGCKPLML*EGTGPWATLSPPVS Trigger: TGACACCGGTGGAGAGAGGGTGGCCCAGGGACCAGTGCCTTCCAAAAGCATTAGGGGTTTGCACCCAAAGATACCATAAAAATAATTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS GCA 72 bp | AAGGATACAATTCAGGAGAAGCCATTCAGGAAGAGATaGACAGGGCAAGGTGGGCAGAAGGGAAAGGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: KDTIQEKPFRKR*TGQGGQKGKGY Trigger: ATACCCCTTTCCCTTCTGCCCACCTTGCCCTGTGCATCTCTTCCTGAATGGCTTCTCCTGAATTGTATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000638622.1 ENST00000639196.1 |
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| CDS CCA 72 bp | AGAAGGGAAAGGGGTATAGAGCTTCCACATCATCTCTaGGCATGCGACACTTCCAGCACCTTGATGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RRERGIELPHHL*ACDTSSTLMCR Trigger: TCTACACATCAAGGTGCTGGAAGTGTCGCATGCCCAGAGATGATGTGGAAGCTCTATACCCCTTTCCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000638622.1 ENST00000639196.1 |
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| CDS CAA 90 bp | GCCCAGTCTCTGCTTCTAAGATGGCACCTTGAACACTGCATCCTCTaGAGGAGTGGGAGGAACACCATTTGTCATTTAGTAGCTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: AQSLLLRWHLEHCIL*RSGRNTICHLVAHP Trigger: AGGATGAGCTACTAAATGACAAATGGTGTTCCTCCCACTCCTCAAGAGGATGCAGTGTTCAAGGTGCCATCTTAGAAGCAGAGACTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS CAA 72 bp | CATACAGAGTACAGAAGAAGAAATGTGGATTATAAGTaGGAGGGTGAGATGGCCTCCTGGGAGTTGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HTEYRRRNVDYK*EGEMASWELVH Trigger: GTGGACCAACTCCCAGGAGGCCATCTCACCCTCCAACTTATAATCCACATTTCTTCTTCTGTACTCTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS TCA 72 bp | AAGAACAAATCAGTGCTTCTTCACAGTTCTAGAGGCTaGGAAGTCCAAGGTGATGGCAGGTTTTGGTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KNKSVLLHSSRG*EVQGDGRFWCL Trigger: CAGACACCAAAACCTGCCATCACCTTGGACTTCTCAGCCTCTAGAACTGTGAAGAAGCACTGATTTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS TCA 72 bp | ACAGTTTTTGAAGATCACATCCATGTGCCATGTCTCTaGCATCTTCCAATGCCACGGGTTCCAAAGACCATG | + |
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Preference number: 6 (lower is better) Translates to: TVFEDHIHVPCL*HLPMPRVPKTM Trigger: CATGGTCTTTGGAACCCGTGGCATTGGAAGATGTCAGAGACATGGCACATGGATGTGATCTTCAAAAACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000638622.1 ENST00000639196.1 |
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| CDS GCA 72 bp | CTTGGCAACAGACCAAAATTCCCTCTCCAGTGTAGTTaGCAGTTCCAGCAAGAACAAATCAGTGCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LGNRPKFPLQCS*QFQQEQISASS Trigger: TGAAGAAGCACTGATTTGTTCTTGCTGGAACTGGCAACTACACTGGAGAGGGAATTTTGGTCTGTTGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS CCA 72 bp | ATATACAGTCTTGAGGAAGGAGCAGACTGCCATCTTTaGTGTTTCTCAGGCTTCATTGGTGATACCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: IYSLEEGADCHL*CFSGFIGDTSM Trigger: CATGGAGGTATCACCAATGAAGCCTGAGAAACACCAAAGATGGCAGTCTGCTCCTTCCTCAAGACTGTATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639196.1 |
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| CDS CAA 72 bp | GACTTCATGACTAATGGTTATGACTGGGATGGATTTTaGCACCAGTACAAGTTTCATCTGTCCTGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: DFMTNGYDWDGF*HQYKFHLSWGH Trigger: GTGGCCCCAGGACAGATGAAACTTGTACTGGTGCAAAAATCCATCCCAGTCATAACCATTAGTCATGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS TCA 72 bp | AACTGCTTAAGTAGTACCTCCTTGAAGAGCCTTCCATaGCCCTGCCATCCAGGTTTGCATATCTGTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: NCLSSTSLKSLP*PCHPGLHICSL Trigger: TAAAGAACAGATATGCAAACCTGGATGGCAGGGTCATGGAAGGCTCTTCAAGGAGGTACTACTTAAGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS TCA 72 bp | TTCTTCACAATATTTCACAAACCTCTCCTTGAGTTGTaGGCTCACATCCGGTGTTCGAACATAGAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FFTIFHKPLLEL*AHIRCSNIELQ Trigger: CTGGAGCTCTATGTTCGAACACCGGATGTGAGCTCACAACTCAAGGAGAGGTTTGTGAAATATTGTGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639709.1 ENST00000640409.1 |
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| CDS CCA 72 bp | TGTGATGAAATCTTGTGTGATCTGCTCTGTCCTGCCTaGGCTGTGAATCATTTCTTTGTCTGGTGTATCTAC | + |
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Preference number: 6 (lower is better) Translates to: CDEILCDLLCPA*AVNHFFVWCIY Trigger: GTAGATACACCAGACAAAGAAATGATTCACAGCCCAGGCAGGACAGAGCAGATCACACAAGATTTCATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS CCA 72 bp | ACAGTAGTCCTGCCTTATCCACAGTTCCACTTCCCATaGTTTCAGTTATCCATGGGAAACTGTGGTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: TVVLPYPQFHFP*FQLSMGNCGQK Trigger: TTTTTGACCACAGTTTCCCATGGATAACTGAAACCATGGGAAGTGGAACTGTGGATAAGGCAGGACTACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS CAA 72 bp | GTTATCATGACTAATGGTTATGACTGGGATGGATTTTaGCACCAGTACAAGTTTCATCTGTCCTGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VIMTNGYDWDGF*HQYKFHLSWGH Trigger: GTGGCCCCAGGACAGATGAAACTTGTACTGGTGCAAAAATCCATCCCAGTCATAACCATTAGTCATGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000639709.1 ENST00000640409.1 |
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| CDS TCA 72 bp | AAATCTTGTGTGATCTGCTCTGTCCTGCCTGGGCTGTaGATCATTTCTTTGTCTGGTGTATCTACACTCTAT | + |
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Preference number: 6 (lower is better) Translates to: KSCVICSVLPGL*IISLSGVSTLY Trigger: ATAGAGTGTAGATACACCAGACAAAGAAATGATTCACAGCCCAGGCAGGACAGAGCAGATCACACAAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS TCA 72 bp | CCACTACAGCAGAATTATGCTTCAGGTTCCTACCATTaGTGTCATAGTTACAGTAGTCCTGCCTTATCCACA | + |
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Preference number: 6 (lower is better) Translates to: PLQQNYASGSYH*CHSYSSPALST Trigger: TGTGGATAAGGCAGGACTACTGTAACTATGACATCAATGGTAGGAACCTGAAGCATAATTCTGCTGTAGTGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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| CDS CCA 72 bp | AGTCTTAGGTTATTTGCTCAAAGCTTATGGGAGAATTaGGTCCTCTATCCAGGTCTTCCAACTCCAGATTTC | + |
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Preference number: 6 (lower is better) Translates to: SLRLFAQSLWEN*VLYPGLPTPDF Trigger: GAAATCTGGAGTTGGAAGACCTGGATAGAGGACCCAATTCTCCCATAAGCTTTGAGCAAATAACCTAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CAA 90 bp | CCTTCCATGACCCTGCCATCCAGGTTTGCATATCTGTTCTTTACTTaGTGGCACTCTATTTATTTTCTTCCTAGAACTGGGTGTAATGGT | + |
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Preference number: 6 (lower is better) Translates to: PSMTLPSRFAYLFFT*WHSIYFLPRTGCNG Trigger: ACCATTACACCCAGTTCTAGGAAGAAAATAAATAGAGTGCCACAAAGTAAAGAACAGATATGCAAACCTGGATGGCAGGGTCATGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638823.1 |
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| CDS CAA 90 bp | AGAAATGTGGATTATAAGTTGGAGGGTGAGATGGCCTCCTGGGAGTaGGTCCACAAACACAGAAACATATTTGAGTTTCATACAACCTAC | + |
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Preference number: 6 (lower is better) Translates to: RNVDYKLEGEMASWE*VHKHRNIFEFHTTY Trigger: GTAGGTTGTATGAAACTCAAATATGTTTCTGTGTTTGTGGACCAACTCCCAGGAGGCCATCTCACCCTCCAACTTATAATCCACATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS TCA 72 bp | GAGTCAGGTGTTATTCATGTAGAGTTCCCCTGGCTGTaGCAAAGACAGTCAGAAATTCAAAGAAAACCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ESGVIHVEFPWL*QRQSEIQRKPL Trigger: CAAAGGTTTTCTTTGAATTTCTGACTGTCTTTGTCACAGCCAGGGGAACTCTACATGAATAACACCTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000639709.1 ENST00000640409.1 |
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| CDS CAA 90 bp | ATTAAGTCCGTTATCATGACTAATGGTTATGACTGGGATGGATTTTaGCACCAGTACAAGTTTCATCTGTCCTGGGGCCACATAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: IKSVIMTNGYDWDGF*HQYKFHLSWGHINK Trigger: TTTGTTTATGTGGCCCCAGGACAGATGAAACTTGTACTGGTGCAAAAATCCATCCCAGTCATAACCATTAGTCATGATAACGGACTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000639709.1 ENST00000640409.1 |
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| CDS CCA 72 bp | TCCTTTTTAAGTCTTAGGTTATTTGCTCAAAGCTTATaGGAGAATTGGGTCCTCTATCCAGGTCTTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: SFLSLRLFAQSL*ENWVLYPGLPT Trigger: AGTTGGAAGACCTGGATAGAGGACCCAATTCTCCCATAAGCTTTGAGCAAATAACCTAAGACTTAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS TCA 72 bp | GATTTTATAGTATTCTATTGGGTAGATATACAGTCTTaGGGAAGGAGCAGACTGCCATCTTTGGTGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: DFIVFYWVDIQS*GRSRLPSLVFL Trigger: GAGAAACACCAAAGATGGCAGTCTGCTCCTTCCTCAAGACTGTATATCTACCCAATAGAATACTATAAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639196.1 |
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| CDS CCA 72 bp | GACATTAAGTCCGTTATCATGACTAATGGTTATGACTaGGATGGATTTTTGCACCAGTACAAGTTTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: DIKSVIMTNGYD*DGFLHQYKFHL Trigger: CAGATGAAACTTGTACTGGTGCAAAAATCCATCCCAGTCATAACCATTAGTCATGATAACGGACTTAATGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000639709.1 ENST00000640409.1 |
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| CDS GCA 72 bp | GTAGTCTTTGATGGTGCAGCATTCCTTGTGTGGACATaGAGTGATTTTATAGTATTCTATTGGGTAGATATA | + |
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Preference number: 6 (lower is better) Translates to: VVFDGAAFLVWT*SDFIVFYWVDI Trigger: TATATCTACCCAATAGAATACTATAAAATCACTGCATGTCCACACAAGGAATGCTGCACCATCAAAGACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639196.1 |
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| CDS TCA 72 bp | TTTATGCAAGCTGCTAAGACTTTCACATACATTATCTaGAAGCCCCACGATAAATCTAAGGTAGTTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: FMQAAKTFTYII*KPHDKSKVVEK Trigger: TTTCTCAACTACCTTAGATTTATCGTGGGGCTTTCAGATAATGTATGTGAAAGTCTTAGCAGCTTGCATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640409.1 |
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| CDS CCA 72 bp | ATCCACAGTTCCACTTCCCATGGTTTCAGTTATCCATaGGAAACTGTGGTCAAAAATATTATATGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: IHSSTSHGFSYP*ETVVKNIIWKI Trigger: AATTTTCCATATAATATTTTTGACCACAGTTTCCCATGGATAACTGAAACCATGGGAAGTGGAACTGTGGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000638622.1 ENST00000639196.1 ENST00000639709.1 |
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