Pregenerated sensors for ZNF813 (Homo sapiens)
Ensembl gene IDs: ENSG00000198346Ensembl transcript IDs: ENST00000396403.9
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCCCGGCAGAGAAAGTCTCTTTTAAAACTCATGTCTTATCCTTCTaGGTGCCTCAAACTAGGACCTGTTCAGACATAACAGATTCGTAC | + |
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Preference number: 1 (lower is better) Translates to: RPAEKVSFKTHVLSF*VPQTRTCSDITDSY Trigger: GTACGAATCTGTTATGTCTGAACAGGTCCTAGTTTGAGGCACCCAGAAGGATAAGACATGAGTTTTAAAAGAGACTTTCTCTGCCGGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTCAGGCTGGAGTGCAATaGTGCAATCTCGGCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAQAGVQ*CNLGSQ Trigger: CTGTGAGCCGAGATTGCACCATTGCACTCCAGCCTG...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR GCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTTTCAAGCCATTCTCCTaGCTCAGCCTCCAGAGTATC | + |
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Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAFKPFS*LSLQSI Trigger: GATACTCTGGAGGCTGAGGCAGGAGAATGGCTTGAA...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTCATGTCTTATCCTTCTaGGTGCCTCAAACTAGGACC | + |
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Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAHVLSF*VPQTRT Trigger: GGTCCTAGTTTGAGGCACCCAGAAGGATAAGACATG...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTAGCCTCCAGAGTATCTaGGATTACAGGCATTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPASLQSI*DYRHLP Trigger: TGGCAAATGCCTGTAATCCCAGATACTCTGGAGGCT...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR TCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTGCAGGGAACATGGAATaGTTTTCCTGTAGGATCTCA | + |
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Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAAGNME*FSCRIS Trigger: TGAGATCCTACAGGAAAATCATTCCATGTTCCCTGC...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCACTCTGGATCTCAGGTaGTCCACCCACCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KTDVDGVPATPCITFNIVTLDLR*STHLGL Trigger: GAGGCCAAGGTGGGTGGATCACCTGAGATCCAGAGT...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR TCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTGGTTTGACTTGTGACTaGAAACTCTGTGATATTCTT | + |
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Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAGLTCD*KLCDIL Trigger: AAGAATATCACAGAGTTTTCAGTCACAAGTCAAACC...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR TCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTGGTATGGACGATGTCTaGAAAATTTGCCGATTATTA | + |
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Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAGMDDV*KICRLL Trigger: TAATAATCGGCAAATTTTTCAGACATCGTCCATACC...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR GCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCGCTCACAGCAATCTCTaGCTCCCGGGTTCAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: KTDVDGVPATPCITFNIVAHSNL*LPGSSH Trigger: ATGGCTTGAACCCGGGAGGCAGAGATTGCTGTGAGC...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCGCTGGTCTCGAACTCTaGATCTCAGGTGATCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: KTDVDGVPATPCITFNIVAGLEL*ISGDPP Trigger: GGGTGGATCACCTGAGATCCAGAGTTCGAGACCAGC...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTCGTACCAGTTTATTTTaGTGCAAAAACTGGGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: YHRLHSSWPCMHVLPCPARTSLF*CKNWEI Trigger: AATTTCCCAGTTTTTGCACCAAAATAAACTGGTACG...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCGCAAACTGGGAAAAGTaGCTCATGTTTGTTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KTDVDGVPATPCITFNIVANWEK*LMFVGQ Trigger: CTGGCCAACAAACATGAGCCACTTTTCCCAGTTTGC...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCATGGTGAGTAAGTGTTaGCTGCTCATTAAGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: KTDVDGVPATPCITFNIVMVSKC*LLIKAL Trigger: CAAAGCCTTAATGAGCAGTCAACACTTACTCACCAT...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACACTCCTGACCTCAAGTaGTCTACCCGCCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VKQINVICHLNRMKDENHTPDLK*STRLGL Trigger: GAGGCCAAGGCGGGTAGATCACTTGAGGTCAGGAGT...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACACGAAGCAGGGAACATaGAATGATTTTCCTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: VKQINVICHLNRMKDENHTKQGT*NDFPVG Trigger: TCCTACAGGAAAATCATTCCATGTTCCCTGCTTCGT...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR CCA 72 bp | CTCGAGCTATCCTCCTACCACAGACTCCACAGCAGCTaGCCCTGCATGCATGTGCTACCGTGCCCAGCTAAT | + |
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Preference number: 3 (lower is better) Translates to: LELSSYHRLHSS*PCMHVLPCPAN Trigger: ATTAGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTAGGAGGATAGCTCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR-3UTR CAA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCTTGCCCAGGCTTGTCTaGAATACCTGGGCTTACATG | + |
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Preference number: 3 (lower is better) Translates to: KTDVDGVPATPCITFNIVLPRLV*NTWAYM Trigger: CATGTAAGCCCAGGTATTCAAGACAAGCCTGGGCAA...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR TCA 72 bp | GGTTTCACCATGTTAATCAGCCTGTTCTCAAACTCCTaGCTATTGTTTCTGCTGTTACCTGTCAGTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GFTMLISLFSNS*LLFLLLPVSPL Trigger: AAGAGGACTGACAGGTAACAGCAGAAACAATAGTCAGGAGTTTGAGAACAGGCTGATTAACATGGTGAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR CCA 72 bp | AAAAAGGACTGTAGATACTCAAGTGCCACTTATTTCTaGGATGCAAGGATGGTTCAACATAGTCAAGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: KKDCRYSSATYF*DARMVQHSQAN Trigger: ATTTGCTTGACTATGTTGAACCATCCTTGCATCCCAGAAATAAGTGGCACTTGAGTATCTACAGTCCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTTTATTGCCCCCATCTTaGCTCACTGCAACCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: YHRLHSSWPCMHVLPCPALLPPS*LTATSA Trigger: GGCGGAGGTTGCAGTGAGCCAAGATGGGGGCAATAA...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR GCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTTGTGGATGGTGTGCCTaGCACTCCATGCATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: YHRLHSSWPCMHVLPCPACGWCA*HSMHHL Trigger: AAGGTGATGCATGGAGTGGCAGGCACACCATCCACA...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR TCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTGCCTTGCCAACATGGTaGAACCCCGTCTTACTAAAA | + |
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Preference number: 4 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAALPTW*NPVLLK Trigger: TTTTAGTAAGACGGGGTTTCACCATGTTGGCAAGGC...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTGCAAACTGGGAAAAGTaGCTCATGTTTGTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAANWEK*LMFVGQ Trigger: CTGGCCAACAAACATGAGCCACTTTTCCCAGTTTGC...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR GCA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTCCTGACTATTGTTTCTaGTGTTACCTGTCAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: YHRLHSSWPCMHVLPCPAPDYCF*CYLSVL Trigger: GAGGACTGACAGGTAACAGCAGAAACAATAGTCAGG...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR TCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCACTCCTGACCTCAAGTaGTCTACCCGCCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVTPDLK*STRLGL Trigger: GAGGCCAAGGCGGGTAGATCACTTGAGGTCAGGAGT...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCCACTGCATTCCAGCCTaGGAGACAGAGCGAGACACC | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVHCIPA*ETERDT Trigger: GGTGTCTCGCTCTGTCTCCCAGGCTGGAATGCAGTG...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR TCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCGCAGCCTCAGCCTCCTaGGTAACTGGGATTACAAGC | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVAASAS*VTGITS Trigger: GCTTGTAATCCCAGTTACTCAGGAGGCTGAGGCTGC...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCCAGGCTGGAGTGCAATaGTGCAATCTCGGCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVQAGVQ*CNLGSQ Trigger: CTGTGAGCCGAGATTGCACCATTGCACTCCAGCCTG...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCAGACTCCACAGCAGCTaGCCCTGCATGCATGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVRLHSS*PCMHVL Trigger: TAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCT...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCGTAATCTCCACACTTTaGGAGGCTGAGGTGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVVISTL*EAEVGR Trigger: TCTGCCCACCTCAGCCTCCCAAAGTGTGGAGATTAC...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCAGCCTCCTGAGTAACTaGGATTACAAGCACCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVSLLSN*DYKHPP Trigger: TGGCGGGTGCTTGTAATCCCAGTTACTCAGGAGGCT...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCAAGTCCTGTGAGATCTaGCGAGAAGGGGAGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVKSCEI*REGESS Trigger: ACTTGACTCCCCTTCTCGCCAGATCTCACAGGACTT...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR GCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCTCACCCATGCTGGAATaGAGTGGCATGATCATAGCT | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVSPMLE*SGMIIA Trigger: AGCTATGATCATGCCACTGCATTCCAGCATGGGTGA...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR TCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCGCAGGGAACATGGAATaGTTTTCCTGTAGGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVAGNME*FSCRIS Trigger: TGAGATCCTACAGGAAAATCATTCCATGTTCCCTGC...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR GCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACAGAAGTCAATCGCGCTaGCGTGGGACCGTCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: VKQINVICHLNRMKDENHRSQSR*RGTVTP Trigger: TGGAGTGACGGTCCCACGGCAGCGCGATTGACTTCT...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACTTTGGGAGGCTGAGGTaGGCAGATCGTGAGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VKQINVICHLNRMKDENHFGRLR*ADREVR Trigger: CCTGACCTCACGATCTGCCCACCTCAGCCTCCCAAA...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR GCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACGCTCACAGCAATCTCTaGCTCCCGGGTTCAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VKQINVICHLNRMKDENHAHSNL*LPGSSH Trigger: ATGGCTTGAACCCGGGAGGCAGAGATTGCTGTGAGC...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACGCTGGTCTCGAACTCTaGATCTCAGGTGATCCACCC | + |
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Preference number: 4 (lower is better) Translates to: VKQINVICHLNRMKDENHAGLEL*ISGDPP Trigger: GGGTGGATCACCTGAGATCCAGAGTTCGAGACCAGC...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR CAA 72 bp | GTGCCTGCCACTCCATGCATCACCTTCAACATTGTCTaGTCCCAACTCAAACTAAGTTATCCATTTACAAAC | + |
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Preference number: 4 (lower is better) Translates to: VPATPCITFNIV*SQLKLSYPFTN Trigger: GTTTGTAAATGGATAACTTAGTTTGAGTTGGGACAAGACAATGTTGAAGGTGATGCATGGAGTGGCAGGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCCGTACCAGTTTATTTTaGTGCAAAAACTGGGAAATT | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVRTSLF*CKNWEI Trigger: AATTTCCCAGTTTTTGCACCAAAATAAACTGGTACG...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | AAAACTGATGTGGATGGTGTGCCTGCCACTCCATGCATCACCTTCAACATTGTCCAGTCCTCTTCATTGTaGCACAAACAAGATAAATTT | + |
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Preference number: 4 (lower is better) Translates to: KTDVDGVPATPCITFNIVQSSSL*HKQDKF Trigger: AAATTTATCTTGTTTGTGCCACAATGAAGAGGACTG...GACAATGTTGAAGGTGATGCATGGAGTGGCAGGCACACCATCCACATCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACAGCCTCCAGAGTATCTaGGATTACAGGCATTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VKQINVICHLNRMKDENHSLQSI*DYRHLP Trigger: TGGCAAATGCCTGTAATCCCAGATACTCTGGAGGCT...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR TCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACCTGTTCTCAAACTCCTaGCTATTGTTTCTGCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: VKQINVICHLNRMKDENHLFSNS*LLFLLL Trigger: TAACAGCAGAAACAATAGTCAGGAGTTTGAGAACAG...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR GCA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACTTTGAGACAAAGTTTTaGTCTTATTGCCCCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: VKQINVICHLNRMKDENHFETKF*SYCPHL Trigger: AAGATGGGGGCAATAAGAGCAAAACTTTGTCTCAAA...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| 3UTR CAA 72 bp | ACCTGTTCAGACATAACAGATTCGTACCAGTTTATTTaGGTGCAAAAACTGGGAAATTCATACACAATTTTC | + |
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Preference number: 4 (lower is better) Translates to: TCSDITDSYQFI*VQKLGNSYTIF Trigger: GAAAATTGTGTATGAATTTCCCAGTTTTTGCACCAAAATAAACTGGTACGAATCTGTTATGTCTGAACAGGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CAA 90 bp | TACCACAGACTCCACAGCAGCTGGCCCTGCATGCATGTGCTACCGTGCCCAGCTCTTATTGCCCCCATCTaGGCTCACTGCAACCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: YHRLHSSWPCMHVLPCPALIAPI*AHCNLR Trigger: GCGGAGGTTGCAGTGAGCCAAGATGGGGGCAATAAG...AGCTGGGCACGGTAGCACATGCATGCAGGGCCAGCTGCTGTGGAGTCTGTGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CAA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACTTGCCCAGGCTTGTCTaGAATACCTGGGCTTACATG | + |
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Preference number: 5 (lower is better) Translates to: VKQINVICHLNRMKDENHLPRLV*NTWAYM Trigger: CATGTAAGCCCAGGTATTCAAGACAAGCCTGGGCAA...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CAA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACTTTTCCATGAACTTCTaGAAGACCCCTTGTACTAAA | + |
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Preference number: 5 (lower is better) Translates to: VKQINVICHLNRMKDENHFSMNF*KTPCTK Trigger: TTTAGTACAAGGGGTCTTCAAGAAGTTCATGGAAAA...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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| CDS-3UTR CAA 90 bp | GTCAAGCAAATCAATGTGATATGCCACTTGAACAGAATGAAAGATGAAAACCACGGTCTCACTGTAAATTaGATGCTCCTTTTTGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: VKQINVICHLNRMKDENHGLTVN*MLLFVS Trigger: TGAAACAAAAAGGAGCATCAAATTTACAGTGAGACC...GTGGTTTTCATCTTTCATTCTGTTCAAGTGGCATATCACATTGATTTGCTTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396403.9 |
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