RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF780B (Homo sapiens)

Ensembl gene IDs: ENSG00000128000

Ensembl transcript IDs: ENST00000434248.6, ENST00000625684.3, ENST00000678949.1

Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAATCCAGAGAGGACATTAATTTATTCATGAGGGATCTTCTCCCATaGCCCACACACCTCCCATTAGGCCCCACCTCCAACATTGGGATC +
Preference number: 1 (lower is better)
Translates to: QSREDINLFMRDLLP*PTHLPLGPTSNIGI
Trigger: GATCCCAATGTTGGAGGTGGGGCCTAATGGGAGGTGTGTGGGTCATGGGAGAAGATCCCTCATGAATAAATTAATGTCCTCTCTGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR TCA 90 bp AAGGTACGCCTGTATCCAGTAAAATATTTCACGGGCAGTAAACTGTaGACATGGCAGCTACTCTACATTCCTCACATCAGTAACTTTCTC +
Preference number: 1 (lower is better)
Translates to: KVRLYPVKYFTGSKL*TWQLLYIPHISNFL
Trigger: GAGAAAGTTACTGATGTGAGGAATGTAGAGTAGCTGCCATGTTCACAGTTTACTGCCCGTGAAATATTTTACTGGATACAGGCGTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR GCA 90 bp ACTTATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATaGAGTAACTGCAATGCACAATTAAGCAAGGTACGCCTGTATCCA +
Preference number: 1 (lower is better)
Translates to: TYSLQGCCKPSVCIK*SNCNAQLSKVRLYP
Trigger: TGGATACAGGCGTACCTTGCTTAATTGTGCATTGCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR TCA 90 bp CTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATaGTCATCCTTAGTTTCACTAATGCAAGGACCTGTACTTAAATGT +
Preference number: 1 (lower is better)
Translates to: LNLYNGLTAVTSLPK*SSLVSLMQGPVLKC
Trigger: ACATTTAAGTACAGGTCCTTGCATTAGTGAAACTAAGGATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR CCA 90 bp CAACAATTATCAACTAGGTTCACCATCTTTTATGGGCAGGATTTGTaGTATCCCCAAACAATTACACTAGTAACAATTACACTAGTAATC +
Preference number: 1 (lower is better)
Translates to: QQLSTRFTIFYGQDL*YPQTITLVTITLVI
Trigger: GATTACTAGTGTAATTGTTACTAGTGTAATTGTTTGGGGATACCACAAATCCTGCCCATAAAAGATGGTGAACCTAGTTGATAATTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGGCGGGAGAATGGCGTaGACCCAGGAGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIGGRMA*TQEAEL
Trigger: AAGCTCTGCCTCCTGGGTTCACGCCATTCTCCCGCC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATACCAGGAGGCAGAGCTTaGAGTGAGCCCAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIPGGRA*SEPRSH
Trigger: GTGCGATCTGGGCTCACTGCAAGCTCTGCCTCCTGG...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATACCTTCCAATTTCGAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIPSNFE*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTCGAAATTGGAAGG...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAGGGATCTTCTCCCATaGCCCACACACCTCCCATTA +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIRDLLP*PTHLPL
Trigger: TAATGGGAGGTGTGTGGGTCATGGGAGAAGATCCCT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAACGGGCAGTAAACTGTaGACATGGCAGCTACTCTAC +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVITGSKL*TWQLLY
Trigger: GTAGAGTAGCTGCCATGTTCACAGTTTACTGCCCGT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGGCGGGAGAATGGCGTaGACCCAGGAGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSGGRMA*TQEAEL
Trigger: AAGCTCTGCCTCCTGGGTTCACGCCATTCTCCCGCC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGTGCCAGTTTTGTACTaGGTACAGTGTCAGCCATAT +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIVPVLY*VQCQPY
Trigger: ATATGGCTGACACTGTACTCAGTACAAAACTGGCAC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAACCCAGGGACTCTGCTaGTTTCAAAGAAGAAAGTTC +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVITQGLC*FQRRKF
Trigger: GAACTTTCTTCTTTGAAATCAGCAGAGTCCCTGGGT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCAAAATTAGCTGGGCATaGTGGCGGGTGCCTCTAGTC +
Preference number: 2 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIKISWA*WRVPLV
Trigger: GACTAGAGGCACCCGCCACCATGCCCAGCTAATTTT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGGTTCCGGACAATCTTaGCTCCCTATACAATCCAAA +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIGSGQS*LPIQSK
Trigger: TTTGGATTGTATAGGGAGCCAAGATTGTCCGGAACC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAATACCCACCATAATTTaGGAGCATACTTTCATGGGG +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIIPTII*EHTFMG
Trigger: CCCCATGAAAGTATGCTCTCAAATTATGGTGGGTAT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGAGGCATGGGGGACATaGACCAACAAACAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSREAWGT*TNKQGQ
Trigger: CTGACCCTGTTTGTTGGTTCATGTCCCCCATGCCTC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGTTCACCATCTTTTATaGGCAGGATTTGTGGTATCC +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIVHHLL*AGFVVS
Trigger: GGATACCACAAATCCTGCCCATAAAAGATGGTGAAC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATACTCTCTAACTCTGGTTaGTATCACAGACACAAAACC +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVILSNSG*YHRHKT
Trigger: GGTTTTGTGTCTGTGATACCAACCAGAGTTAGAGAG...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAACCAGCTTACCCAAATaGTCATCCTTAGTTTCACTA +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVITSLPK*SSLVSL
Trigger: TAGTGAAACTAAGGATGATCATTTGGGTAAGCTGGT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTCAGATCCTGACCCACTaGGGAATCCTGGAGATGGTT +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSQILTH*GILEMV
Trigger: AACCATCTCCAGGATTCCTCAGTGGGTCAGGATCTG...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACAGATCCTGACCCACTaGGGAATCCTGGAGATGGTT +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRQILTH*GILEMV
Trigger: AACCATCTCCAGGATTCCTCAGTGGGTCAGGATCTG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAATACAATCCAAAGGGTaGCAGTTTTGTACTGAGTAC +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIIQSKG*QFCTEY
Trigger: GTACTCAGTACAAAACTGGCACCCTTTGGATTGTAT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAAAATTAGCTGGGCATaGTGGCGGGTGCCTCTAGTC +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRKISWA*WRVPLV
Trigger: GACTAGAGGCACCCGCCACCATGCCCAGCTAATTTT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAAAATTAGCTGGGCATaGTGGCGGGTGCCTCTAGTC +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSKISWA*WRVPLV
Trigger: GACTAGAGGCACCCGCCACCATGCCCAGCTAATTTT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAACGGGCAGTAAACTGTaGACATGGCAGCTACTCTAC +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRTGSKL*TWQLLY
Trigger: GTAGAGTAGCTGCCATGTTCACAGTTTACTGCCCGT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATATGTGACACAAAGACATaGAATGTGCATATGCTGTTT +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVICDTKT*NVHMLF
Trigger: AAACAGCATATGCACATTTCATGTCTTTGTGTCACA...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGCCAAGGAAGAAATCTaGAGATGGAATGATATTACA +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIAKEEI*RWNDIT
Trigger: TGTAATATCATTCCATCTTCAGATTTCTTCCTTGGC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAATAACTTTTCAGAGATaGCAACGTCTCTCCATAGAT +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIITFQR*QRLSID
Trigger: ATCTATGGAGAGACGTTGTCATCTCTGAAAAGTTAT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATACATGAAATGTGCATATaGTGTTTGGAAAATGGTGCT +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIHEMCI*CLENGA
Trigger: AGCACCATTTTCCAAACAGCATATGCACATTTCATG...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAGAGAGATAACCAAATaGAATGCAGAATCTGCAATG +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIREITK*NAESAM
Trigger: CATTGCAGATTCTGCATTGCATTTGGTTATCTCTCT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTACGATCTTGGCTCACTaGCACCTCCACCTTCCAATT +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSTILAH*HLHLPI
Trigger: AATTGGAAGGTGGAGGTGGCAGTGAGCCAAGATCGT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAACGATCTTGGCTCACTaGCACCTCCACCTTCCAATT +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRTILAH*HLHLPI
Trigger: AATTGGAAGGTGGAGGTGGCAGTGAGCCAAGATCGT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCAATGTTCTAGACCAGTaGCTCTCTAACTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIINVLDQ*LSNSGW
Trigger: CCAACCAGAGTTAGAGAGCCACTGGTCTAGAACATT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGCCTCCCAAGTAGCTaGGATTACAGGAATGCACCA +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSSLPSS*DYRNAP
Trigger: TGGTGCATTCCTGTAATCCCAGCTACTTGGGAGGCT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCATACCCACCATAATTTaGGAGCATACTTTCATGGGG +
Preference number: 2 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIIPTII*EHTFMG
Trigger: CCCCATGAAAGTATGCTCTCAAATTATGGTGGGTAT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAAGACAGTGAATCCCTaGGACCACAACTTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSKTVNP*DHNLCR
Trigger: TCTGCACAAGTTGTGGTCTCAGGGATTCACTGTCTT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGGAGAGATGGAGTTTTaGCATGTTGGCCAAGTTGGT +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRGEMEF*HVGQVG
Trigger: ACCAACTTGGCCAACATGGCAAAACTCCATCTCTCC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGATACTACCGGGATGTaGAATGACCCAGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRDTTGM*NDPERS
Trigger: ACTCCTTTCTGGGTCATTGCACATCCCGGTAGTATC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAAAGGGGGCAGTGTATaGAGACATCACATGGCAAGA +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSKGGSV*RHHMAR
Trigger: TCTTGCCATGTGATGTCTGCATACACTGCCCCCTTT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAAAGGGGGCAGTGTATaGAGACATCACATGGCAAGA +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRKGGSV*RHHMAR
Trigger: TCTTGCCATGTGATGTCTGCATACACTGCCCCCTTT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGTTCACCATCTTTTATaGGCAGGATTTGTGGTATCC +
Preference number: 2 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIVHHLL*AGFVVS
Trigger: GGATACCACAAATCCTGCCCATAAAAGATGGTGAAC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATATATTGTCTTTATGTTTaGGTAACACACATGCTGATG +
Preference number: 2 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIYCLYV*VTHMLM
Trigger: CATCAGCATGTGTGTTACCCAAACATAAAGACAATA...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCATTTTTCATACACAGTaGAGGCTTGTCTACACTCCT +
Preference number: 2 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIIFHTQ*RLVYTP
Trigger: AGGAGTGTAGACAAGCCTTCACTGTGTATGAAAAAT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGTGCCAGTTTTGTACTaGGTACAGTGTCAGCCATAT +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRVPVLY*VQCQPY
Trigger: ATATGGCTGACACTGTACTCAGTACAAAACTGGCAC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAACCCAGGGACTCTGCTaGTTTCAAAGAAGAAAGTTC +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRTQGLC*FQRRKF
Trigger: GAACTTTCTTCTTTGAAATCAGCAGAGTCCCTGGGT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAATAAATAACAGATCCTaGCCCACTGAGGAATCCTGG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRINNRS*PTEESW
Trigger: CCAGGATTCCTCAGTGGGTCAGGATCTGTTATTTAT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCTCACTGCAAGGTTGCTaGAAACCTTCAGTGTGTATA +
Preference number: 2 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRISLQGC*KPSVCI
Trigger: TATACACACTGAAGGTTTGCAGCAACCTTGCAGTGA...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGAGAGCATACTTTCATaGGGTTTCCATGCTACAATA +
Preference number: 2 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIESILS*GFHATI
Trigger: TATTGTAGCATGGAAACCCCATGAAAGTATGCTCTC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAATGTTCTAGACCAGTaGCTCTCTAACTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRNVLDQ*LSNSGW
Trigger: CCAACCAGAGTTAGAGAGCCACTGGTCTAGAACATT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGGTTCCGGACAATCTTaGCTCCCTATACAATCCAAA +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSGSGQS*LPIQSK
Trigger: TTTGGATTGTATAGGGAGCCAAGATTGTCCGGAACC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGGAGTTTTGCCATGTTaGCCAAGTTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSGVLPC*PSWSQT
Trigger: AGTTTGAGACCAACTTGGCCAACATGGCAAAACTCC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAATACCCACCATAATTTaGGAGCATACTTTCATGGGG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRIPTII*EHTFMG
Trigger: CCCCATGAAAGTATGCTCTCAAATTATGGTGGGTAT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGGAGCATACTCTGACTaGGTATGTCTTAGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRGAYSD*VCLSFV
Trigger: CACAAAACTAAGACATACTCAGTCAGAGTATGCTCC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAATACCCCAAGCTGGATaGTCACAATACCCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRIPQAG*SQYPVK
Trigger: TTTTACAGGGTATTGTGATCATCCAGCTTGGGGTAT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTATACCCCAAGCTGGATaGTCACAATACCCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSIPQAG*SQYPVK
Trigger: TTTTACAGGGTATTGTGATCATCCAGCTTGGGGTAT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTCACTGCAAGGTTGCTaGAAACCTTCAGTGTGTATA +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSSLQGC*KPSVCI
Trigger: TATACACACTGAAGGTTTGCAGCAACCTTGCAGTGA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACTCTCTAACTCTGGTTaGTATCACAGACACAAAACC +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRLSNSG*YHRHKT
Trigger: GGTTTTGTGTCTGTGATACCAACCAGAGTTAGAGAG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCAGCCAACAACATTTCTaGGCTACTCAAAATTCAATG +
Preference number: 2 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIISQQHF*ATQNSM
Trigger: CATTGAATTTTGAGTAGCCCAGAAATGTTGTTGGCT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTATTTTTCATACACAGTaGAGGCTTGTCTACACTCCT +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSIFHTQ*RLVYTP
Trigger: AGGAGTGTAGACAAGCCTTCACTGTGTATGAAAAAT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGATGCCAGGGATCTTTCTaGCAACTCTTAATGATACTA +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRCQGSF*QLLMIL
Trigger: TAGTATCATTAAGAGTTGTCAGAAAGATCCCTGGCA...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTACCCTGTAAAAGGATaGCAGAAATCTTGTGTCTAC +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSYPVKG*QKSCVY
Trigger: GTAGACACAAGATTTCTGTCATCCTTTTACAGGGTA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCCATGAAATGTGCATATaGTGTTTGGAAAATGGTGCT +
Preference number: 2 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIHEMCI*CLENGA
Trigger: AGCACCATTTTCCAAACAGCATATGCACATTTCATG...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAATAATTACTACAGGTaGTTCTCAACTTACGGGGAG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRNNYYR*FSTYGE
Trigger: CTCCCCGTAAGTTGAGAAGCACCTGTAGTAATTATT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR CAA 90 bp CCACAACAATTATCAACTAGGTTCACCATCTTTTATGGGCAGGATTaGTGGTATCCCCAAACAATTACACTAGTAACAATTACACTAGTA +
Preference number: 2 (lower is better)
Translates to: PQQLSTRFTIFYGQD*WYPQTITLVTITLV
Trigger: TACTAGTGTAATTGTTACTAGTGTAATTGTTTGGGGATACCACAAATCCTGCCCATAAAAGATGGTGAACCTAGTTGATAATTGTTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGCCAAGGAAGAAATCTaGAGATGGAATGATATTACA +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRAKEEI*RWNDIT
Trigger: TGTAATATCATTCCATCTTCAGATTTCTTCCTTGGC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTATAACTTTTCAGAGATaGCAACGTCTCTCCATAGAT +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSITFQR*QRLSID
Trigger: ATCTATGGAGAGACGTTGTCATCTCTGAAAAGTTAT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAACATAGTACTGCCATaGTTGCATGATGATAGAGTT +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRNIVLP*LHDDRV
Trigger: AACTCTATCATCATGCAATCATGGCAGTACTATGTT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACATCCTCTTACGGCCTaGAAACAATATTCCTTTAAA +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRHPLTA*KQYSFK
Trigger: TTTAAAGGAATATTGTTTTCAGGCCGTAAGAGGATG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGAGATAACCAAATaGAATGCAGAATCTGCAATG +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSREITK*NAESAM
Trigger: CATTGCAGATTCTGCATTGCATTTGGTTATCTCTCT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCTATTGTCTTTATGTTTaGGTAACACACATGCTGATG +
Preference number: 2 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIYCLYV*VTHMLM
Trigger: CATCAGCATGTGTGTTACCCAAACATAAAGACAATA...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAGCCAACAACATTTCTaGGCTACTCAAAATTCAATG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRSQQHF*ATQNSM
Trigger: CATTGAATTTTGAGTAGCCCAGAAATGTTGTTGGCT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGTCTTAGTTTTGTGTTaGTATAAAGGAATGTCTGAG +
Preference number: 2 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSVLVLC*YKGMSE
Trigger: CTCAGACATTCCTTTATAGCAACACAAAACTAAGAC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGTCTTAGTTTTGTGTTaGTATAAAGGAATGTCTGAG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRVLVLC*YKGMSE
Trigger: CTCAGACATTCCTTTATAGCAACACAAAACTAAGAC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGATATTGTCTTTATGTTTaGGTAACACACATGCTGATG +
Preference number: 2 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRYCLYV*VTHMLM
Trigger: CATCAGCATGTGTGTTACCCAAACATAAAGACAATA...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR TCA 72 bp GAGGACATTAATTTATTCATGAGGGATCTTCTCCCATaGCCCACACACCTCCCATTAGGCCCCACCTCCAAC +
Preference number: 3 (lower is better)
Translates to: EDINLFMRDLLP*PTHLPLGPTSN
Trigger: GTTGGAGGTGGGGCCTAATGGGAGGTGTGTGGGTCATGGGAGAAGATCCCTCATGAATAAATTAATGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAGGTTCCGGACAATCTaGGCTCCCTATACAATCCAA +
Preference number: 3 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIRFRTI*APYTIQ
Trigger: TTGGATTGTATAGGGAGCCAAGATTGTCCGGAACCT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGCCCCACCTCCAACATaGGGATCAAACTTCAATATG +
Preference number: 3 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIAPPPT*GSNFNM
Trigger: CATATTGAAGTTTGATCCCAATGTTGGAGGTGGGGC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAATGTGCATATGCTGTTaGGAAAATGGTGCTGATAGA +
Preference number: 3 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIMCICC*ENGADR
Trigger: TCTATCAGCACCATTTTCCAAACAGCATATGCACAT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR TCA 72 bp TACAATGGACTTACGGCGGTTACCAGCTTACCCAAATaGTCATCCTTAGTTTCACTAATGCAAGGACCTGTA +
Preference number: 3 (lower is better)
Translates to: YNGLTAVTSLPK*SSLVSLMQGPV
Trigger: TACAGGTCCTTGCATTAGTGAAACTAAGGATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR GCA 72 bp CTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATaGAGTAACTGCAATGCACAATTAAGCAAGGTACGC +
Preference number: 3 (lower is better)
Translates to: LQGCCKPSVCIK*SNCNAQLSKVR
Trigger: GCGTACCTTGCTTAATTGTGCATTGCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAGGAGAGATGGAGTTTaGCCATGTTGGCCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRRRDGV*PCWPSW
Trigger: CCAACTTGGCCAACATGGCAAAACTCCATCTCTCCT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR TCA 72 bp CTGTATCCAGTAAAATATTTCACGGGCAGTAAACTGTaGACATGGCAGCTACTCTACATTCCTCACATCAGT +
Preference number: 3 (lower is better)
Translates to: LYPVKYFTGSKL*TWQLLYIPHIS
Trigger: ACTGATGTGAGGAATGTAGAGTAGCTGCCATGTTCACAGTTTACTGCCCGTGAAATATTTTACTGGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR GCA 72 bp TGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTaGAATGCACAATTAAGCAAGGTACGCCTGTATCCA +
Preference number: 3 (lower is better)
Translates to: CCKPSVCIKCSN*NAQLSKVRLYP
Trigger: TGGATACAGGCGTACCTTGCTTAATTGTGCATTGCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGCTGTAAAAGATGGTTaGCAGGCCAAGGAAGAAATC +
Preference number: 3 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIAVKDG*QAKEEI
Trigger: GATTTCTTCCTTGGCCTGCAAACCATCTTTTACAGC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGATACCCACCATAATTaGAGAGCATACTTTCATGGG +
Preference number: 3 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIDTHHN*RAYFHG
Trigger: CCCATGAAAGTATGCTCTCAAATTATGGTGGGTATC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGGTTCCGGACAATCTaGGCTCCCTATACAATCCAA +
Preference number: 3 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSRFRTI*APYTIQ
Trigger: TTGGATTGTATAGGGAGCCAAGATTGTCCGGAACCT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGCCCCACCTCCAACATaGGGATCAAACTTCAATATG +
Preference number: 3 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRAPPPT*GSNFNM
Trigger: CATATTGAAGTTTGATCCCAATGTTGGAGGTGGGGC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGCTGTAAAAGATGGTTaGCAGGCCAAGGAAGAAATC +
Preference number: 3 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRAVKDG*QAKEEI
Trigger: GATTTCTTCCTTGGCCTGCAAACCATCTTTTACAGC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGATACCCACCATAATTaGAGAGCATACTTTCATGGG +
Preference number: 3 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRDTHHN*RAYFHG
Trigger: CCCATGAAAGTATGCTCTCAAATTATGGTGGGTATC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR TCA 72 bp TTCACTTACATCCTACTTGCCATAAGTTATGTCACATaGCAACACCTTGGAGAAATAACTGCAGTCCTTATT +
Preference number: 3 (lower is better)
Translates to: FTYILLAISYVT*QHLGEITAVLI
Trigger: AATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATGGCAAGTAGGATGTAAGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR GCA 72 bp TTCCAGAATTGCCAAAATATTCACTTACATCCTACTTaGCATAAGTTATGTCACATGACAACACCTTGGAGA +
Preference number: 3 (lower is better)
Translates to: FQNCQNIHLHPT*HKLCHMTTPWR
Trigger: TCTCCAAGGTGTTGTCATGTGACATAACTTATGGCAAGTAGGATGTAAGTGAATATTTTGGCAATTCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR CCA 72 bp TCAACTAGGTTCACCATCTTTTATGGGCAGGATTTGTaGTATCCCCAAACAATTACACTAGTAACAATTACA +
Preference number: 3 (lower is better)
Translates to: STRFTIFYGQDL*YPQTITLVTIT
Trigger: TGTAATTGTTACTAGTGTAATTGTTTGGGGATACCACAAATCCTGCCCATAAAAGATGGTGAACCTAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCCAGGAGGCAGAGCTTaGAGTGAGCCCAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCPGGRA*SEPRSH
Trigger: GTGCGATCTGGGCTCACTGCAAGCTCTGCCTCCTGG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAGCCTCCCAAGTAGCTaGGATTACAGGAATGCACCA +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVISLPSS*DYRNAP
Trigger: TGGTGCATTCCTGTAATCCCAGCTACTTGGGAGGCT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGTTGCTACTGATGTCTaGAGGCTGTCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIVATDV*RLSHIS
Trigger: AGAAATGTGGGACAGCCTTCAGACATCAGTAGCAAC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATACATGAGTTGATTCCATaGCTCAGGACAAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIHELIP*LRTRGM
Trigger: CATGCCTCTTGTCCTGAGTCATGGAATCAACTCATG...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAAAGGGGGCAGTGTATaGAGACATCACATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIKGGSV*RHHMAR
Trigger: TCTTGCCATGTGATGTCTGCATACACTGCCCCCTTT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAATCCCTGAATGTCACTaGTCCATGGACCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIIPECH*SMDHVS
Trigger: AGAAACATGGTCCATGGATCAGTGACATTCAGGGAT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCAGGGATCTTCTCCCATaGCCCACACACCTCCCATTA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCRDLLP*PTHLPL
Trigger: TAATGGGAGGTGTGTGGGTCATGGGAGAAGATCCCT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCTCCACTCATGGCAGATaGAAGGGGGCAGTGTATGCA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCSTHGR*KGAVYA
Trigger: TGCATACACTGCCCCCTTTCATCTGCCATGAGTGGA...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCCAGATCCTGACCCACTaGGGAATCCTGGAGATGGTT +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIQILTH*GILEMV
Trigger: AACCATCTCCAGGATTCCTCAGTGGGTCAGGATCTG...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCAGATCCTGACCCACTaGGGAATCCTGGAGATGGTT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCQILTH*GILEMV
Trigger: AACCATCTCCAGGATTCCTCAGTGGGTCAGGATCTG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAATAAATAACAGATCCTaGCCCACTGAGGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIINNRS*PTEESW
Trigger: CCAGGATTCCTCAGTGGGTCAGGATCTGTTATTTAT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGGCATCAGAATGGAATaGGCACTCAGACTTATACAG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIGIRME*ALRLIQ
Trigger: CTGTATAAGTCTGAGTGCTCATTCCATTCTGATGCC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAATGTTCTAGACCAGTaGCTCTCTAACTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVINVLDQ*LSNSGW
Trigger: CCAACCAGAGTTAGAGAGCCACTGGTCTAGAACATT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATATATGCAGACATCACATaGCAAGAGAGGAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIYADIT*QERKQE
Trigger: CTCTTGCTTCCTCTCTTGCCATGTGATGTCTGCATA...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGGAGCATACTCTGACTaGGTATGTCTTAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIGAYSD*VCLSFV
Trigger: CACAAAACTAAGACATACTCAGTCAGAGTATGCTCC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGAGGCATGGGGGACATaGACCAACAAACAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSEAWGT*TNKQGQ
Trigger: CTGACCCTGTTTGTTGGTTCATGTCCCCCATGCCTC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCCAGATCCTGACCCACTaGGGAATCCTGGAGATGGTT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIQILTH*GILEMV
Trigger: AACCATCTCCAGGATTCCTCAGTGGGTCAGGATCTG...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCACGATCTTGGCTCACTaGCACCTCCACCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIITILAH*HLHLPI
Trigger: AATTGGAAGGTGGAGGTGGCAGTGAGCCAAGATCGT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCCTGTAACTGCCATGTaGACTCACAGCAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCPVTAM*THSSQI
Trigger: AATCTGGCTGCTGTGAGTGCACATGGCAGTTACAGG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAAAATTAGCTGGGCATaGTGGCGGGTGCCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIKISWA*WRVPLV
Trigger: GACTAGAGGCACCCGCCACCATGCCCAGCTAATTTT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGTTGCTACTGATGTCTaGAGGCTGTCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIVATDV*RLSHIS
Trigger: AGAAATGTGGGACAGCCTTCAGACATCAGTAGCAAC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACCTTCCAATTTCGAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRPSNFE*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTCGAAATTGGAAGG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAGGGATCTTCTCCCATaGCCCACACACCTCCCATTA +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRRDLLP*PTHLPL
Trigger: TAATGGGAGGTGTGTGGGTCATGGGAGAAGATCCCT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGATCCACTCATGGCAGATaGAAGGGGGCAGTGTATGCA +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRSTHGR*KGAVYA
Trigger: TGCATACACTGCCCCCTTTCATCTGCCATGAGTGGA...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCATGAGTTGATTCCATaGCTCAGGACAAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCHELIP*LRTRGM
Trigger: CATGCCTCTTGTCCTGAGTCATGGAATCAACTCATG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCAAGACAGTGAATCCCTaGGACCACAACTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIKTVNP*DHNLCR
Trigger: TCTGCACAAGTTGTGGTCTCAGGGATTCACTGTCTT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCAAGACAGTGAATCCCTaGGACCACAACTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCKTVNP*DHNLCR
Trigger: TCTGCACAAGTTGTGGTCTCAGGGATTCACTGTCTT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGGAGAGATGGAGTTTTaGCATGTTGGCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIGEMEF*HVGQVG
Trigger: ACCAACTTGGCCAACATGGCAAAACTCCATCTCTCC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCACGATCTTGGCTCACTaGCACCTCCACCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRITILAH*HLHLPI
Trigger: AATTGGAAGGTGGAGGTGGCAGTGAGCCAAGATCGT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCGATACTACCGGGATGTaGAATGACCCAGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCDTTGM*NDPERS
Trigger: ACTCCTTTCTGGGTCATTGCACATCCCGGTAGTATC...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAATAATTACTACAGGTaGTTCTCAACTTACGGGGAG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVINNYYR*FSTYGE
Trigger: CTCCCCGTAAGTTGAGAAGCACCTGTAGTAATTATT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCCCTGTAACTGCCATGTaGACTCACAGCAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIPVTAM*THSSQI
Trigger: AATCTGGCTGCTGTGAGTGCACATGGCAGTTACAGG...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAGCCTCCCAAGTAGCTaGGATTACAGGAATGCACCA +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRISLPSS*DYRNAP
Trigger: TGGTGCATTCCTGTAATCCCAGCTACTTGGGAGGCT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCCTCATACCCCAAGCTaGATGATCACAATACCCTGT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCPHTPS*MITIPC
Trigger: ACAGGGTATTGTGATCATCCAGCTTGGGGTATGAGG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR CAA 72 bp CTAAGTTCCACAGGGGATTCTGATACCCACCATAATTaGAGAGCATACTTTCATGGGGTTTCCATGCTACAA +
Preference number: 4 (lower is better)
Translates to: LSSTGDSDTHHN*RAYFHGVSMLQ
Trigger: TTGTAGCATGGAAACCCCATGAAAGTATGCTCTCAAATTATGGTGGGTATCAGAATCCCCTGTGGAACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGTTGCTACTGATGTCTaGAGGCTGTCCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIVATDV*RLSHIS
Trigger: AGAAATGTGGGACAGCCTTCAGACATCAGTAGCAAC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCTCAGTAAGTTGCTACTaGTGTCTGAAGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRISVSCY*CLKAVP
Trigger: TGGGACAGCCTTCAGACATCAGTAGCAACTTACTGA...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTACGGGCAGTAAACTGTaGACATGGCAGCTACTCTAC +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSTGSKL*TWQLLY
Trigger: GTAGAGTAGCTGCCATGTTCACAGTTTACTGCCCGT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCGTGCCAGTTTTGTACTaGGTACAGTGTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCVPVLY*VQCQPY
Trigger: ATATGGCTGACACTGTACTCAGTACAAAACTGGCAC...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAACATAGTACTGCCATaGTTGCATGATGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVINIVLP*LHDDRV
Trigger: AACTCTATCATCATGCAATCATGGCAGTACTATGTT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCCATGAGTTGATTCCATaGCTCAGGACAAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIHELIP*LRTRGM
Trigger: CATGCCTCTTGTCCTGAGTCATGGAATCAACTCATG...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCATAAATAACAGATCCTaGCCCACTGAGGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIINNRS*PTEESW
Trigger: CCAGGATTCCTCAGTGGGTCAGGATCTGTTATTTAT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAAAGGGGGCAGTGTATaGAGACATCACATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIKGGSV*RHHMAR
Trigger: TCTTGCCATGTGATGTCTGCATACACTGCCCCCTTT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACCTGTAACTGCCATGTaGACTCACAGCAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRPVTAM*THSSQI
Trigger: AATCTGGCTGCTGTGAGTGCACATGGCAGTTACAGG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATACACTTACATCCTACTTaGCATAAGTTATGTCACATG +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIHLHPT*HKLCHM
Trigger: CATGTGACATAACTTATGGCAAGTAGGATGTAAGTG...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCGGTTCCGGACAATCTTaGCTCCCTATACAATCCAAA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCGSGQS*LPIQSK
Trigger: TTTGGATTGTATAGGGAGCCAAGATTGTCCGGAACC...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCGGAGTTTTGCCATGTTaGCCAAGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCGVLPC*PSWSQT
Trigger: AGTTTGAGACCAACTTGGCCAACATGGCAAAACTCC...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAGCCTCCCAAGTAGCTaGGATTACAGGAATGCACCA +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRSLPSS*DYRNAP
Trigger: TGGTGCATTCCTGTAATCCCAGCTACTTGGGAGGCT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAATGGAACTTCCCAGTaGTATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRINGTSQ*YQVAVV
Trigger: AACTACAGCCACCTGATATCACTGGGAAGTTCCATT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGATCAGTAAGTTGCTACTaGTGTCTGAAGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRSVSCY*CLKAVP
Trigger: TGGGACAGCCTTCAGACATCAGTAGCAACTTACTGA...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTCAGTAAGTTGCTACTaGTGTCTGAAGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSSVSCY*CLKAVP
Trigger: TGGGACAGCCTTCAGACATCAGTAGCAACTTACTGA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCATCCCTGAATGTCACTaGTCCATGGACCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIIPECH*SMDHVS
Trigger: AGAAACATGGTCCATGGATCAGTGACATTCAGGGAT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCATACCCACCATAATTTaGGAGCATACTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCIPTII*EHTFMG
Trigger: CCCCATGAAAGTATGCTCTCAAATTATGGTGGGTAT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGTGCCAGTTTTGTACTaGGTACAGTGTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIVPVLY*VQCQPY
Trigger: ATATGGCTGACACTGTACTCAGTACAAAACTGGCAC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCATACCCCAAGCTGGATaGTCACAATACCCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCIPQAG*SQYPVK
Trigger: TTTTACAGGGTATTGTGATCATCCAGCTTGGGGTAT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCTCACTGCAAGGTTGCTaGAAACCTTCAGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIISLQGC*KPSVCI
Trigger: TATACACACTGAAGGTTTGCAGCAACCTTGCAGTGA...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGGAGAGATGGAGTTTTaGCATGTTGGCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSGEMEF*HVGQVG
Trigger: ACCAACTTGGCCAACATGGCAAAACTCCATCTCTCC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAATGTCACTGATCCATaGACCATGTTTCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVINVTDP*TMFLEL
Trigger: TAATTCTAGAAACATGGTCCATGGATCAGTGACATT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCGTTCACCATCTTTTATaGGCAGGATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCVHHLL*AGFVVS
Trigger: GGATACCACAAATCCTGCCCATAAAAGATGGTGAAC...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCTCTCTAACTCTGGTTaGTATCACAGACACAAAACC +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCLSNSG*YHRHKT
Trigger: GGTTTTGTGTCTGTGATACCAACCAGAGTTAGAGAG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAATGTTCTAGACCAGTaGCTCTCTAACTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRINVLDQ*LSNSGW
Trigger: CCAACCAGAGTTAGAGAGCCACTGGTCTAGAACATT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGGAGTTTTGCCATGTTaGCCAAGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIGVLPC*PSWSQT
Trigger: AGTTTGAGACCAACTTGGCCAACATGGCAAAACTCC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACCTCATACCCCAAGCTaGATGATCACAATACCCTGT +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRPHTPS*MITIPC
Trigger: ACAGGGTATTGTGATCATCCAGCTTGGGGTATGAGG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGAGGAATCCTGGAGATaGTTTCATTTTGATCAATTA +
Preference number: 4 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIEESWR*FHFDQL
Trigger: TAATTGATCAAAATGAAACCATCTCCAGGATTCCTC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCACATGACAACACCTTaGAGAAATAACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCHMTTP*RNNCSP
Trigger: AGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCCACATGACAACACCTTaGAGAAATAACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIHMTTP*RNNCSP
Trigger: AGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTG...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAATGGAACTTCCCAGTaGTATCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSNGTSQ*YQVAVV
Trigger: AACTACAGCCACCTGATATCACTGGGAAGTTCCATT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCATACCCACCATAATTTaGGAGCATACTTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIIPTII*EHTFMG
Trigger: CCCCATGAAAGTATGCTCTCAAATTATGGTGGGTAT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCACCAGCTTACCCAAATaGTCATCCTTAGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIITSLPK*SSLVSL
Trigger: TAGTGAAACTAAGGATGATCATTTGGGTAAGCTGGT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCTGCCAGGGATCTTTCTaGCAACTCTTAATGATACTA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCCQGSF*QLLMIL
Trigger: TAGTATCATTAAGAGTTGTCAGAAAGATCCCTGGCA...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCTTTCTGGGGAGTCTATaGACATTCAAGATAACATCC +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCFLGSL*TFKITS
Trigger: GGATGTTATCTTGAATGTTCATAGACTCCCCAGAAA...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCTACCCTGTAAAAGGATaGCAGAAATCTTGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIYPVKG*QKSCVY
Trigger: GTAGACACAAGATTTCTGTCATCCTTTTACAGGGTA...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGGCATCAGAATGGAATaGGCACTCAGACTTATACAG +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRGIRME*ALRLIQ
Trigger: CTGTATAAGTCTGAGTGCTCATTCCATTCTGATGCC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGGCATCAGAATGGAATaGGCACTCAGACTTATACAG +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSGIRME*ALRLIQ
Trigger: CTGTATAAGTCTGAGTGCTCATTCCATTCTGATGCC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCATACAATCCAAAGGGTaGCAGTTTTGTACTGAGTAC +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIIQSKG*QFCTEY
Trigger: GTACTCAGTACAAAACTGGCACCCTTTGGATTGTAT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCAATAATTACTACAGGTaGTTCTCAACTTACGGGGAG +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIINNYYR*FSTYGE
Trigger: CTCCCCGTAAGTTGAGAAGCACCTGTAGTAATTATT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGTTCACCATCTTTTATaGGCAGGATTTGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIVHHLL*AGFVVS
Trigger: GGATACCACAAATCCTGCCCATAAAAGATGGTGAAC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGGTTCCGGACAATCTTaGCTCCCTATACAATCCAAA +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRGSGQS*LPIQSK
Trigger: TTTGGATTGTATAGGGAGCCAAGATTGTCCGGAACC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGGAGTTTTGCCATGTTaGCCAAGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRGVLPC*PSWSQT
Trigger: AGTTTGAGACCAACTTGGCCAACATGGCAAAACTCC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTATGCAGACATCACATaGCAAGAGAGGAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSYADIT*QERKQE
Trigger: CTCTTGCTTCCTCTCTTGCCATGTGATGTCTGCATA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR CAA 72 bp GTCAAGGAGCATACTCTGACTGAGTATGTCTTAGTTTaGTGTTGCTATAAAGGAATGTCTGAGGTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VKEHTLTEYVLV*CCYKGMSEVGL
Trigger: TAACCCAACCTCAGACATTCCTTTATAGCAACACAAAACTAAGACATACTCAGTCAGAGTATGCTCCTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCATTTTTCATACACAGTaGAGGCTTGTCTACACTCCT +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIIFHTQ*RLVYTP
Trigger: AGGAGTGTAGACAAGCCTTCACTGTGTATGAAAAAT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCTGTGACACAAAGACATaGAATGTGCATATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCCDTKT*NVHMLF
Trigger: AAACAGCATATGCACATTTCATGTCTTTGTGTCACA...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGCCAAGGAAGAAATCTaGAGATGGAATGATATTACA +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIAKEEI*RWNDIT
Trigger: TGTAATATCATTCCATCTTCAGATTTCTTCCTTGGC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCACCAGCTTACCCAAATaGTCATCCTTAGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRITSLPK*SSLVSL
Trigger: TAGTGAAACTAAGGATGATCATTTGGGTAAGCTGGT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCATAACTTTTCAGAGATaGCAACGTCTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCITFQR*QRLSID
Trigger: ATCTATGGAGAGACGTTGTCATCTCTGAAAAGTTAT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCATAACTTTTCAGAGATaGCAACGTCTCTCCATAGAT +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIITFQR*QRLSID
Trigger: ATCTATGGAGAGACGTTGTCATCTCTGAAAAGTTAT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCAACATAGTACTGCCATaGTTGCATGATGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCNIVLP*LHDDRV
Trigger: AACTCTATCATCATGCAATCATGGCAGTACTATGTT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGGAGCATACTCTGACTaGGTATGTCTTAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSGAYSD*VCLSFV
Trigger: CACAAAACTAAGACATACTCAGTCAGAGTATGCTCC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCATCCTCTTACGGCCTaGAAACAATATTCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCHPLTA*KQYSFK
Trigger: TTTAAAGGAATATTGTTTTCAGGCCGTAAGAGGATG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCTACCCTGTAAAAGGATaGCAGAAATCTTGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIYPVKG*QKSCVY
Trigger: GTAGACACAAGATTTCTGTCATCCTTTTACAGGGTA...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGATCACTGCAAGGTTGCTaGAAACCTTCAGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRSLQGC*KPSVCI
Trigger: TATACACACTGAAGGTTTGCAGCAACCTTGCAGTGA...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCCATGAAATGTGCATATaGTGTTTGGAAAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIHEMCI*CLENGA
Trigger: AGCACCATTTTCCAAACAGCATATGCACATTTCATG...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCAGAGAGATAACCAAATaGAATGCAGAATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCREITK*NAESAM
Trigger: CATTGCAGATTCTGCATTGCATTTGGTTATCTCTCT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCATACAATCCAAAGGGTaGCAGTTTTGTACTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIIQSKG*QFCTEY
Trigger: GTACTCAGTACAAAACTGGCACCCTTTGGATTGTAT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGAGAGCATACTTTCATaGGGTTTCCATGCTACAATA +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIESILS*GFHATI
Trigger: TATTGTAGCATGGAAACCCCATGAAAGTATGCTCTC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCAGCCAACAACATTTCTaGGCTACTCAAAATTCAATG +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCSQQHF*ATQNSM
Trigger: CATTGAATTTTGAGTAGCCCAGAAATGTTGTTGGCT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTCACATGACAACACCTTaGAGAAATAACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSHMTTP*RNNCSP
Trigger: AGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTG...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR CAA 72 bp AGTGTGACACAAAGACATGAAATGTGCATATGCTGTTaGGAAAATGGTGCTGATAGACTTATTCACTGCAAG +
Preference number: 4 (lower is better)
Translates to: SVTQRHEMCICC*ENGADRLIHCK
Trigger: CTTGCAGTGAATAAGTCTATCAGCACCATTTTCCAAACAGCATATGCACATTTCATGTCTTTGTGTCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAATTTTTCATACACAGTaGAGGCTTGTCTACACTCCT +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRIFHTQ*RLVYTP
Trigger: AGGAGTGTAGACAAGCCTTCACTGTGTATGAAAAAT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGCCAAGGAAGAAATCTaGAGATGGAATGATATTACA +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIAKEEI*RWNDIT
Trigger: TGTAATATCATTCCATCTTCAGATTTCTTCCTTGGC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTGCCAGGGATCTTTCTaGCAACTCTTAATGATACTA +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSCQGSF*QLLMIL
Trigger: TAGTATCATTAAGAGTTGTCAGAAAGATCCCTGGCA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGATTTCTGGGGAGTCTATaGACATTCAAGATAACATCC +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRFLGSL*TFKITS
Trigger: GGATGTTATCTTGAATGTTCATAGACTCCCCAGAAA...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTTTCTGGGGAGTCTATaGACATTCAAGATAACATCC +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSFLGSL*TFKITS
Trigger: GGATGTTATCTTGAATGTTCATAGACTCCCCAGAAA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGATACCCTGTAAAAGGATaGCAGAAATCTTGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRYPVKG*QKSCVY
Trigger: GTAGACACAAGATTTCTGTCATCCTTTTACAGGGTA...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAGAGAGATAACCAAATaGAATGCAGAATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIREITK*NAESAM
Trigger: CATTGCAGATTCTGCATTGCATTTGGTTATCTCTCT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAATAATTACTACAGGTaGTTCTCAACTTACGGGGAG +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSNNYYR*FSTYGE
Trigger: CTCCCCGTAAGTTGAGAAGCACCTGTAGTAATTATT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGAGAGCATACTTTCATaGGGTTTCCATGCTACAATA +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSESILS*GFHATI
Trigger: TATTGTAGCATGGAAACCCCATGAAAGTATGCTCTC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGAGAGCATACTTTCATaGGGTTTCCATGCTACAATA +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRESILS*GFHATI
Trigger: TATTGTAGCATGGAAACCCCATGAAAGTATGCTCTC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAGCCAACAACATTTCTaGGCTACTCAAAATTCAATG +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRISQQHF*ATQNSM
Trigger: CATTGAATTTTGAGTAGCCCAGAAATGTTGTTGGCT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCGAGGAATCCTGGAGATaGTTTCATTTTGATCAATTA +
Preference number: 4 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCEESWR*FHFDQL
Trigger: TAATTGATCAAAATGAAACCATCTCCAGGATTCCTC...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGAGGAATCCTGGAGATaGTTTCATTTTGATCAATTA +
Preference number: 4 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIEESWR*FHFDQL
Trigger: TAATTGATCAAAATGAAACCATCTCCAGGATTCCTC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTGTGACACAAAGACATaGAATGTGCATATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSCDTKT*NVHMLF
Trigger: AAACAGCATATGCACATTTCATGTCTTTGTGTCACA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR TCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTCATCCTCTTACGGCCTaGAAACAATATTCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSHPLTA*KQYSFK
Trigger: TTTAAAGGAATATTGTTTTCAGGCCGTAAGAGGATG...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACATGAAATGTGCATATaGTGTTTGGAAAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRHEMCI*CLENGA
Trigger: AGCACCATTTTCCAAACAGCATATGCACATTTCATG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGTCTTAGTTTTGTGTTaGTATAAAGGAATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIVLVLC*YKGMSE
Trigger: CTCAGACATTCCTTTATAGCAACACAAAACTAAGAC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR GCA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGACACTTACATCCTACTTaGCATAAGTTATGTCACATG +
Preference number: 4 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRHLHPT*HKLCHM
Trigger: CATGTGACATAACTTATGGCAAGTAGGATGTAAGTG...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAATGTCACTGATCCATaGACCATGTTTCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRINVTDP*TMFLEL
Trigger: TAATTCTAGAAACATGGTCCATGGATCAGTGACATT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAATGTCACTGATCCATaGACCATGTTTCTAGAATTA +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSNVTDP*TMFLEL
Trigger: TAATTCTAGAAACATGGTCCATGGATCAGTGACATT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CCA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTTATTGTCTTTATGTTTaGGTAACACACATGCTGATG +
Preference number: 4 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSYCLYV*VTHMLM
Trigger: CATCAGCATGTGTGTTACCCAAACATAAAGACAATA...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
3UTR CAA 72 bp TTATCAACTAGGTTCACCATCTTTTATGGGCAGGATTaGTGGTATCCCCAAACAATTACACTAGTAACAATT +
Preference number: 4 (lower is better)
Translates to: LSTRFTIFYGQD*WYPQTITLVTI
Trigger: AATTGTTACTAGTGTAATTGTTTGGGGATACCACAAATCCTGCCCATAAAAGATGGTGAACCTAGTTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAAGGAGAGATGGAGTTTaGCCATGTTGGCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIRRDGV*PCWPSW
Trigger: CCAACTTGGCCAACATGGCAAAACTCCATCTCTCCT...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp GAGGTGCCAGGCTCTTTTGTACAACCAGCTCTCATAGGAACTAACAGAGTGATAGTTGATATATCCTTCTaGATGTCCCTGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: EVPGSFVQPALIGTNRVIVDISF*MSLSSL
Trigger: GAGGGACGACAGGGACATCAAGAAGGATATATCAAC...TATCACTCTGTTAGTTCCTATGAGAGCTGGTTGTACAAAAGAGCCTGGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCAGGAGAGATGGAGTTTaGCCATGTTGGCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCRRDGV*PCWPSW
Trigger: CCAACTTGGCCAACATGGCAAAACTCCATCTCTCCT...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCGTTGATATATCCTTCTaGATGTCCCTGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCVDISF*MSLSSL
Trigger: GAGGGACGACAGGGACATCAAGAAGGATATATCAAC...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCAGGTTCCGGACAATCTaGGCTCCCTATACAATCCAA +
Preference number: 5 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIRFRTI*APYTIQ
Trigger: TTGGATTGTATAGGGAGCCAAGATTGTCCGGAACCT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAGGAGAGATGGAGTTTaGCCATGTTGGCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIRRDGV*PCWPSW
Trigger: CCAACTTGGCCAACATGGCAAAACTCCATCTCTCCT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCGCTGTAAAAGATGGTTaGCAGGCCAAGGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIAVKDG*QAKEEI
Trigger: GATTTCTTCCTTGGCCTGCAAACCATCTTTTACAGC...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCAGGTTCCGGACAATCTaGGCTCCCTATACAATCCAA +
Preference number: 5 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIRFRTI*APYTIQ
Trigger: TTGGATTGTATAGGGAGCCAAGATTGTCCGGAACCT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAGTTGATATATCCTTCTaGATGTCCCTGTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRVDISF*MSLSSL
Trigger: GAGGGACGACAGGGACATCAAGAAGGATATATCAAC...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAGGTTCCGGACAATCTaGGCTCCCTATACAATCCAA +
Preference number: 5 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRRFRTI*APYTIQ
Trigger: TTGGATTGTATAGGGAGCCAAGATTGTCCGGAACCT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTGCCCCACCTCCAACATaGGGATCAAACTTCAATATG +
Preference number: 5 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSAPPPT*GSNFNM
Trigger: CATATTGAAGTTTGATCCCAATGTTGGAGGTGGGGC...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCATGTGCATATGCTGTTaGGAAAATGGTGCTGATAGA +
Preference number: 5 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIIMCICC*ENGADR
Trigger: TCTATCAGCACCATTTTCCAAACAGCATATGCACAT...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCGATACCCACCATAATTaGAGAGCATACTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIDTHHN*RAYFHG
Trigger: CCCATGAAAGTATGCTCTCAAATTATGGTGGGTATC...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp ACTAAATCTTTACAATGGACTTACGGCGGTTACCAGCTTACCCAAATGATCATCCTGGATACCATCTGCTaGTTTCTTTACTTACAACAA +
Preference number: 5 (lower is better)
Translates to: TKSLQWTYGGYQLTQMIILDTIC*FLYLQQ
Trigger: TTGTTGTAAGTAAAGAAACAAGCAGATGGTATCCAG...GATGATCATTTGGGTAAGCTGGTAACCGCCGTAAGTCCATTGTAAAGATTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCTGGATACCATCTGCTaGTTTCTTTACTTACAACAA +
Preference number: 5 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCLDTIC*FLYLQQ
Trigger: TTGTTGTAAGTAAAGAAACAAGCAGATGGTATCCAG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp GGGTTTCCATGCTACAATACACTAAAGAGAGATAACCAAATGCAATGCAGAATCATGTGCATATGCTGTTaGGAAAATGGTGCTGATAGA +
Preference number: 5 (lower is better)
Translates to: GFPCYNTLKRDNQMQCRIMCICC*ENGADR
Trigger: TCTATCAGCACCATTTTCCAAACAGCATATGCACAT...GATTCTGCATTGCATTTGGTTATCTCTCTTTAGTGTATTGTAGCATGGAAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp TATTCACTGCAAGGTTGCTGCAAACCTTCAGTGTGTATAAAATGCAGTAACTGCCTACAGATCCGTGCTTaGGAATTACAGAACATAAAA +
Preference number: 5 (lower is better)
Translates to: YSLQGCCKPSVCIKCSNCLQIRA*ELQNIK
Trigger: TTTTATGTTCTGTAATTCCAAAGCACGGATCTGTAG...GCAGTTACTGCATTTTATACACACTGAAGGTTTGCAGCAACCTTGCAGTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAATGTGCATATGCTGTTaGGAAAATGGTGCTGATAGA +
Preference number: 5 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRMCICC*ENGADR
Trigger: TCTATCAGCACCATTTTCCAAACAGCATATGCACAT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp AAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAGAAAGAAAGAGGTTTATTaGGCTCAGTGTTCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: KLCHMTTPWRNNCSPYSRKKEVY*AQCSVG
Trigger: TCCTACAGAACACTGAGCCAAATAAACCTCTTTCTT...TCTAGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTAAGAAAGAGGTTTATTaGGCTCAGTGTTCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSKKEVY*AQCSVG
Trigger: TCCTACAGAACACTGAGCCAAATAAACCTCTTTCTT...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1
CDS-3UTR CAA 90 bp CATAAGTTATGTCACATGACAACACCTTGGAGAAATAACTGCAGTCCTTATTCTCTACAGATCCGTGCTTaGGAATTACAGAACATAAAA +
Preference number: 5 (lower is better)
Translates to: HKLCHMTTPWRNNCSPYSLQIRA*ELQNIK
Trigger: TTTTATGTTCTGTAATTCCAAAGCACGGATCTGTAG...AGAATAAGGACTGCAGTTATTTCTCCAAGGTGTTGTCATGTGACATAACTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434248.6
ENST00000625684.3
ENST00000678949.1