RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF764 (Homo sapiens)

Ensembl gene IDs: ENSG00000169951

Ensembl transcript IDs: ENST00000252797.6, ENST00000395091.3

Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTaGGCAGTAAAAAGACAATGGAGGTGGTGGGTGCCTGTAGTCCCA +
Preference number: 1 (lower is better)
Translates to: DNRRPDPVHSHRILT*AVKRQWRWWVPVVP
Trigger: TGGGACTACAGGCACCCACCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR GCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCCCTGTTCACACCACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGPCSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTGGTGTGAACAGGG...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR TCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACTGGGAGAGGATTCCTTaGGCACTGCAGGTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHWERIP*ALQVEA
Trigger: AGCCTCAACCTGCAGTGCTCAAGGAATCCTCTCCCA...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR GCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCTTCTCAACTCAGCCCTaGCTCAGTAGAGGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGFSTQP*LSRGGL
Trigger: AAGGCCCCCTCTACTGAGGCAGGGCTGAGTTGAGAA...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR TCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCAGGCAGAGGTTGCAGTaGGCTGAGATTGCGCTATTG +
Preference number: 2 (lower is better)
Translates to: NGTWCLVRSPREWWGWVARQRLQ*AEIALL
Trigger: CAATAGCGCAATCTCAGCTCACTGCAACCTCTGCCT...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACGTAGTCTCAGATATTTaGAAGGCTGATGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHVVSDI*KADGRG
Trigger: TCCTCTCCCATCAGCCTTCCAAATATCTGAGACTAC...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACAGGATTTTAACTTaGGCAGTAAAAAGACAATGG +
Preference number: 2 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGHRILT*AVKRQW
Trigger: CCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTG...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR GCA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGTTCTCAACTCAGCCCTaGCTCAGTAGAGGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMFSTQP*LSRGGL
Trigger: AAGGCCCCCTCTACTGAGGCAGGGCTGAGTTGAGAA...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR TCA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGTTCAGCCAAGGAGTTTaGGACCAGCCTGGACAACAG +
Preference number: 2 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMFSQGV*DQPGQQ
Trigger: CTGTTGTCCAGGCTGGTCTCAAACTCCTTGGCTGAA...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CCA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTTGGACAGAATGGCACGTGGTGCTTaGTCAGGAGCCCACGGGAGT +
Preference number: 2 (lower is better)
Translates to: ASHINEREMPDGKAYLDRMARGA*SGAHGS
Trigger: ACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCAT...TCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR TCA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGCAGCCTGGACAACAGTaGGAACCTCATCTCTATGTA +
Preference number: 2 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMQPGQQ*EPHLYV
Trigger: TACATAGAGATGAGGTTCTCACTGTTGTCCAGGCTG...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR GCA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTTGGACAGATGTAATCCCAGCACTTaGGGAAGCCGAGACGACAGG +
Preference number: 2 (lower is better)
Translates to: ASHINEREMPDGKAYLDRCNPST*GSRDDR
Trigger: CCTGTCGTCTCGGCTTCCGCAAGTGCTGGGATTACA...TCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR GCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGCCCTGTTCACACCACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEPCSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTGGTGTGAACAGGG...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR GCA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAGGATTCCTTGAGCACTaGAGGTTGAGGCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKGFLEH*RLRLQL
Trigger: TAACTGCAGCCTCAACCTGCAGTGCTCAAGGAATCC...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR TCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGTGGGAGAGGATTCCTTaGGCACTGCAGGTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEWERIP*ALQVEA
Trigger: AGCCTCAACCTGCAGTGCTCAAGGAATCCTCTCCCA...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CCA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTTGGACAGAAAAAGACAATGGAGGTaGTGGGTGCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: ASHINEREMPDGKAYLDRKRQWR*WVPVVP
Trigger: TGGGACTACAGGCACCCACCACCTCCATTGTCTTTT...TCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR GCA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAATGTAATCCCAGCACTTaGGGAAGCCGAGACGACAGG +
Preference number: 2 (lower is better)
Translates to: FANSNDHRNSASHINERECNPST*GSRDDR
Trigger: CCTGTCGTCTCGGCTTCCGCAAGTGCTGGGATTACA...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CCA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTTGGACAGAAGTTTGAGACCAGCCTaGACAACAGTGAGAACCTCA +
Preference number: 2 (lower is better)
Translates to: ASHINEREMPDGKAYLDRSLRPA*TTVRTS
Trigger: TGAGGTTCTCACTGTTGTCCAGGCTGGTCTCAAACT...TCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR CAA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTaGGACAGAGACATGGGTCTAAGAAATACTTCCCTTTCTTCTTCG +
Preference number: 2 (lower is better)
Translates to: ASHINEREMPDGKAY*DRDMGLRNTSLSSS
Trigger: CGAAGAAGAAAGGGAAGTATTTCTTAGACCCATGTCTCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR TCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGCAGCCTGGACAACAGTaGGAACCTCATCTCTATGTA +
Preference number: 2 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEQPGQQ*EPHLYV
Trigger: TACATAGAGATGAGGTTCTCACTGTTGTCCAGGCTG...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CCA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGGTAGTCTCAGATATTTaGAAGGCTGATGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: ANSNDHRNSASHINEREMVVSDI*KADGRG
Trigger: TCCTCTCCCATCAGCCTTCCAAATATCTGAGACTAC...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CCA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAAGTTTGAGACCAGCCTaGACAACAGTGAGAACCTCA +
Preference number: 2 (lower is better)
Translates to: FANSNDHRNSASHINERESLRPA*TTVRTS
Trigger: TGAGGTTCTCACTGTTGTCCAGGCTGGTCTCAAACT...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCTCAGTAGAGGGGGCCTaGGAGAGCCCTGGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: NGTWCLVRSPREWWGWVASVEGA*ESPGQW
Trigger: CCACTGCCCAGGGCTCTCCAAGGCCCCCTCTACTGA...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACCTTGAGCACTGCAGGTaGAGGCTGCAGTTAGCCCTG +
Preference number: 3 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHLEHCR*RLQLAL
Trigger: CAGGGCTAACTGCAGCCTCAACCTGCAGTGCTCAAG...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACAGGAAGGAGAATTGCTaGAACTCTGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHRKENC*NSGGRG
Trigger: ACCTCTGCCTCCAGAGTTCAAGCAATTCTCCTTCCT...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACCGAGTTGCCAAATCTTaGGATTTTTCAAAAGACACC +
Preference number: 3 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHRVAKS*DFSKDT
Trigger: GGTGTCTTTTGAAAAATCCAAAGATTTGGCAACTCG...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTTGGACAGATCAGTAGAGGGGGCCTaGGAGAGCCCTGGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: ASHINEREMPDGKAYLDRSVEGA*ESPGQW
Trigger: CCACTGCCCAGGGCTCTCCAAGGCCCCCTCTACTGA...TCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAACTTGAGCACTGCAGGTaGAGGCTGCAGTTAGCCCTG +
Preference number: 3 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKLEHCR*RLQLAL
Trigger: CAGGGCTAACTGCAGCCTCAACCTGCAGTGCTCAAG...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGAATGGCACGTGGTGCTaGGTCAGGAGCCCACGGGAG +
Preference number: 3 (lower is better)
Translates to: ANSNDHRNSASHINEREMNGTWC*VRSPRE
Trigger: CTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR CCA 72 bp AGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTaGGCAGTAAAAAGACAATGGAGGTGGTGGGTGCCT +
Preference number: 3 (lower is better)
Translates to: RPDPVHSHRILT*AVKRQWRWWVP
Trigger: AGGCACCCACCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAGATGGAAAGGCCTATTaGGACAGAGACATGGGTCTA +
Preference number: 3 (lower is better)
Translates to: FANSNDHRNSASHINEREDGKAY*DRDMGL
Trigger: TAGACCCATGTCTCTGTCCAAATAGGCCTTTCCATC...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR-3UTR CAA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGCGAGTTGCCAAATCTTaGGATTTTTCAAAAGACACC +
Preference number: 3 (lower is better)
Translates to: ANSNDHRNSASHINEREMRVAKS*DFSKDT
Trigger: GGTGTCTTTTGAAAAATCCAAAGATTTGGCAACTCG...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCGAGGGGCGTCCCCGGTaGGGTGCCTTGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGEGRPR*GALDSC
Trigger: GCAGCTGTCCAAGGCACCGCACCGGGGACGCCCCTC...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCAGGAGCCCACGGGAGTaGTGGGGATGGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGRSPRE*WGWVAG
Trigger: CCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCT...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCGCGTCCCCGGTGCGGTaGCTTGGACAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGASPVR*LGQLLP
Trigger: TGGGAGCAGCTGTCCAAGGCACCGCACCGGGGACGC...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACGCCATCTCCGAGCTCTaGCGGAAGCAGCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHAISEL*RKQRPQ
Trigger: CTGCGGGCGCTGCTTCCGCCAGAGCTCGGAGATGGC...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp ATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGCCGGCCCCGGGCCGATaGACCCACTGGTGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: MARGAWSGAHGSGGDGWPPAPGR*THWCLA
Trigger: GGCCAAACACCAGTGGGTTCATCGGCCCGGGGCCGG...CGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACTCTCGCCGCTGTGGGTaGGCCTGTGGGCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHSRRCG*ACGLPS
Trigger: AGATGGCAGCCCACAGGCGCACCCACAGCGGCGAGA...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACATCTCCGGGTACAGCTaGAAGCCCACGGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHISGYS*KPTGGS
Trigger: GGACCCGCCCGTGGGCTTCCAGCTGTACCCGGAGAT...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCAGCCCACGGGAGTGGTaGGGATGGGTGGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NGTWCLVRSPREWWGWVASPREW*GWVAGP
Trigger: TGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCT...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGTGCGCCTGTGGGCTaGCATCTCCGAGCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: NGTWCLVRSPREWWGWVAGAPVG*HLRALA
Trigger: CGCCAGAGCTCGGAGATGGCAGCCCACAGGCGCACC...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGCCTGCGGAACCTCCTaGGCCCGAGAAAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NGTWCLVRSPREWWGWVAACGTS*ARESLP
Trigger: GGGGAGGCTTTCTCGGGCGCAGGAGGTTCCGCAGGC...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395091.3
CDS-3UTR GCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACCCCTGTTCACACCACTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHPCSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTGGTGTGAACAGGG...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCTGTAATCCCAGCACTTaGGGAAGCCGAGACGACAGG +
Preference number: 4 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGCNPST*GSRDDR
Trigger: CCTGTCGTCTCGGCTTCCGCAAGTGCTGGGATTACA...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp ATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGATGGCACGTGGTGCTTaGTCAGGAGCCCACGGGAGT +
Preference number: 4 (lower is better)
Translates to: MARGAWSGAHGSGGDGWPMARGA*SGAHGS
Trigger: ACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCAT...CGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACTTCAGCCAAGGAGTTTaGGACCAGCCTGGACAACAG +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHFSQGV*DQPGQQ
Trigger: CTGTTGTCCAGGCTGGTCTCAAACTCCTTGGCTGAA...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACGGATTCCTTGAGCACTaGAGGTTGAGGCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHGFLEH*RLRLQL
Trigger: TAACTGCAGCCTCAACCTGCAGTGCTCAAGGAATCC...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACGCGGGAAATGCCAGATaGAAAGGCCTATTTGGACAG +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHAGNAR*KGLFGQ
Trigger: CTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGC...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACCAGCCTGGACAACAGTaGGAACCTCATCTCTATGTA +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHQPGQQ*EPHLYV
Trigger: TACATAGAGATGAGGTTCTCACTGTTGTCCAGGCTG...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCAACTCCAGAAAACCTaGGTGCTACAGACCACTGTT +
Preference number: 4 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGQLQKT*VLQTTV
Trigger: AACAGTGGTCTGTAGCACTCAGGTTTTCTGGAGTTG...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp CGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCCACCTTGTTTCTGGAATCTaGTGGGTCCGTTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RGAWSGAHGSGGDGWPGHLVSGI*WVRLCL
Trigger: CAGACACAAACGGACCCAGCAGATTCCAGAAACAAG...GTGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252797.6
CDS-3UTR CCA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCGTAGTCTCAGATATTTaGAAGGCTGATGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGVVSDI*KADGRG
Trigger: TCCTCTCCCATCAGCCTTCCAAATATCTGAGACTAC...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp ATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGAAAAGACAATGGAGGTaGTGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: MARGAWSGAHGSGGDGWPKRQWR*WVPVVP
Trigger: TGGGACTACAGGCACCCACCACCTCCATTGTCTTTT...CGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGATTCCTTGAGCACTaGAGGTTGAGGCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: NGTWCLVRSPREWWGWVAGFLEH*RLRLQL
Trigger: TAACTGCAGCCTCAACCTGCAGTGCTCAAGGAATCC...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGTTTCTGGAATCTGCTaGGTCCGTTTGTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: NGTWCLVRSPREWWGWVAVSGIC*VRLCLT
Trigger: TGTCAGACACAAACGGACCCAGCAGATTCCAGAAAC...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252797.6
CDS-3UTR CCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCAGTTTGAGACCAGCCTaGACAACAGTGAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: NGTWCLVRSPREWWGWVASLRPA*TTVRTS
Trigger: TGAGGTTCTCACTGTTGTCCAGGCTGGTCTCAAACT...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAGCGCCGAGCGCTGCGTaGAGGCCCGGCCACACTCCA +
Preference number: 4 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKAPSAA*RPGHTP
Trigger: TGGAGTGTGGCCGGGCCTTCACGCAGCGCTCGGCGC...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGGGTGCGCCTGTGGGCTaGCATCTCCGAGCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMGAPVG*HLRALA
Trigger: CGCCAGAGCTCGGAGATGGCAGCCCACAGGCGCACC...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGGCCATCTCCGAGCTCTaGCGGAAGCAGCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMAISEL*RKQRPQ
Trigger: CTGCGGGCGCTGCTTCCGCCAGAGCTCGGAGATGGC...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCCTTGTTTCTGGAATCTaGGTCCGTTTGTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: NGTWCLVRSPREWWGWVALVSGI*VRLCLT
Trigger: TGTCAGACACAAACGGACCCAGATTCCAGAAACAAG...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395091.3
CDS-3UTR GCA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAGCGTCCCCGGTGCGGTaGCTTGGACAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKASPVR*LGQLLP
Trigger: TGGGAGCAGCTGTCCAAGGCACCGCACCGGGGACGC...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAGCCACGGCTGACTTCTaGCCAAAGCGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKATADF*PKRRPH
Trigger: GTGCGGCCGCCGCTTTGGCCAGAAGTCAGCCGTGGC...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp CCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGTGGGCCACGGCTGACTTCTaGCCAAAGCGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PVHSHRILTWAVKRQWRWATADF*PKRRPH
Trigger: GTGCGGCCGCCGCTTTGGCCAGAAGTCAGCCGTGGC...CCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAGCGCCGAGCGCTGCGTaGAGGCCCGGCCACACTCCA +
Preference number: 4 (lower is better)
Translates to: FANSNDHRNSASHINEREAPSAA*RPGHTP
Trigger: TGGAGTGTGGCCGGGCCTTCACGCAGCGCTCGGCGC...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGAGGGGCGTCCCCGGTaGGGTGCCTTGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEEGRPR*GALDSC
Trigger: GCAGCTGTCCAAGGCACCGCACCGGGGACGCCCCTC...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGGTCAGCGCCGAGCGCTaGGTGAAGGCCCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: ANSNDHRNSASHINEREMVSAER*VKARPH
Trigger: GTGTGGCCGGGCCTTCACGCAGCGCTCGGCGCTGAC...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGTCAGCGCCGAGCGCTaGGTGAAGGCCCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEVSAER*VKARPH
Trigger: GTGTGGCCGGGCCTTCACGCAGCGCTCGGCGCTGAC...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp CCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGTGGTCTCGCCGCTGTGGGTaGGCCTGTGGGCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: PVHSHRILTWAVKRQWRWSRRCG*ACGLPS
Trigger: AGATGGCAGCCCACAGGCGCACCCACAGCGGCGAGA...CCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGAGCCCACGGGAGTGGTaGGGATGGGTGGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMESPREW*GWVAGP
Trigger: TGGCCCGGCCACCCATCCCCACCACTCCCGTGGGCT...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp CCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGTGGGTGTTTGGCCACGGCTaGCTTCTGGCCAAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PVHSHRILTWAVKRQWRWVFGHG*LLAKAA
Trigger: CGCCGCTTTGGCCAGAAGTCAGCCGTGGCCAAACAC...CCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp CCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGTGGCCCGGTGCGGTGCCTTaGACAGCTGCTCCCAACCAT +
Preference number: 4 (lower is better)
Translates to: PVHSHRILTWAVKRQWRWPGAVP*TAAPNH
Trigger: ATGGTTGGGAGCAGCTGTCCAAGGCACCGCACCGGG...CCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAAGGAGCCCACGGGAGTaGTGGGGATGGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FANSNDHRNSASHINERERSPRE*WGWVAG
Trigger: CCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCT...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGATCTCCGGGTACAGCTaGAAGCCCACGGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEISGYS*KPTGGS
Trigger: GGACCCGCCCGTGGGCTTCCAGCTGTACCCGGAGAT...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAATGTAATCCCAGCACTTaGGGAAGCCGAGACGACAGG +
Preference number: 4 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKCNPST*GSRDDR
Trigger: CCTGTCGTCTCGGCTTCCGCAAGTGCTGGGATTACA...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAACTGTGGGTGCGCCTGTaGGCTGCCATCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: FANSNDHRNSASHINERELWVRL*AAISEL
Trigger: GAGCTCGGAGATGGCAGCCCACAGGCGCACCCACAG...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR CAA 72 bp CAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTaGGGCAGTAAAAAGACAATGGAGGTGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QARSSTQSQDFN*GSKKTMEVVGA
Trigger: GGCACCCACCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAGTGTTTGGCCACGGCTaGCTTCTGGCCAAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: FANSNDHRNSASHINEREVFGHG*LLAKAA
Trigger: CGCCGCTTTGGCCAGAAGTCAGCCGTGGCCAAACAC...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAATTCAGCCAAGGAGTTTaGGACCAGCCTGGACAACAG +
Preference number: 4 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKFSQGV*DQPGQQ
Trigger: CTGTTGTCCAGGCTGGTCTCAAACTCCTTGGCTGAA...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTTGGACAGATTCTCAACTCAGCCCTaGCTCAGTAGAGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ASHINEREMPDGKAYLDRFSTQP*LSRGGL
Trigger: AAGGCCCCCTCTACTGAGGCAGGGCTGAGTTGAGAA...TCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGAGTTTGAGACCAGCCTaGACAACAGTGAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMSLRPA*TTVRTS
Trigger: TGAGGTTCTCACTGTTGTCCAGGCTGGTCTCAAACT...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGATGGCACGTGGTGCTTaGTCAGGAGCCCACGGGAGT +
Preference number: 4 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEMARGA*SGAHGS
Trigger: ACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCAT...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp GCAAGTCATATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTTGGACAGAAGGCAGAGGTTGCAGTaGGCTGAGATTGCGCTATTG +
Preference number: 4 (lower is better)
Translates to: ASHINEREMPDGKAYLDRRQRLQ*AEIALL
Trigger: CAATAGCGCAATCTCAGCTCACTGCAACCTCTGCCT...TCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTATATGACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGGTAGTCTCAGATATTTaGAAGGCTGATGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMVVSDI*KADGRG
Trigger: TCCTCTCCCATCAGCCTTCCAAATATCTGAGACTAC...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAACAACTCCAGAAAACCTaGGTGCTACAGACCACTGTT +
Preference number: 4 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKQLQKT*VLQTTV
Trigger: AACAGTGGTCTGTAGCACTCAGGTTTTCTGGAGTTG...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR GCA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGTTCTCAACTCAGCCCTaGCTCAGTAGAGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ANSNDHRNSASHINEREMFSTQP*LSRGGL
Trigger: AAGGCCCCCTCTACTGAGGCAGGGCTGAGTTGAGAA...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp CCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGTGGAAAAGACAATGGAGGTaGTGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PVHSHRILTWAVKRQWRWKRQWR*WVPVVP
Trigger: TGGGACTACAGGCACCCACCACCTCCATTGTCTTTT...CCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGAGGCAGAGGTTGCAGTaGGCTGAGATTGCGCTATTG +
Preference number: 4 (lower is better)
Translates to: ANSNDHRNSASHINEREMRQRLQ*AEIALL
Trigger: CAATAGCGCAATCTCAGCTCACTGCAACCTCTGCCT...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGCGGGAAATGCCAGATaGAAAGGCCTATTTGGACAG +
Preference number: 4 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEAGNAR*KGLFGQ
Trigger: CTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGC...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR TCA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGCAGCCTGGACAACAGTaGGAACCTCATCTCTATGTA +
Preference number: 4 (lower is better)
Translates to: ANSNDHRNSASHINEREMQPGQQ*EPHLYV
Trigger: TACATAGAGATGAGGTTCTCACTGTTGTCCAGGCTG...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
3UTR CAA 72 bp ATAAATGAGCGGGAAATGCCAGATGGAAAGGCCTATTaGGACAGAGACATGGGTCTAAGAAATACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: INEREMPDGKAY*DRDMGLRNTSL
Trigger: AAGGGAAGTATTTCTTAGACCCATGTCTCTGTCCAAATAGGCCTTTCCATCTGGCATTTCCCGCTCATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CCA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGCCTTTTTCTTGTTTCTaGAATCTGGGTCCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMEPFSCF*NLGPFV
Trigger: CACAAACGGACCCAGATTCCAGAAACAAGAAAAAGG...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395091.3
CDS-3UTR CCA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGCACAGGATTTTAACTTaGGCAGTAAAAAGACAATGG +
Preference number: 4 (lower is better)
Translates to: ANSNDHRNSASHINEREMHRILT*AVKRQW
Trigger: CCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTG...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCATCTGCTGGGTCCGTTaGTGTCTGACATTTCGCCAC +
Preference number: 5 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGICWVR*CLTFRH
Trigger: GTGGCGAAATGTCAGACACAAACGGACCCAGCAGAT...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252797.6
CDS-3UTR CAA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCATGAGAGCTGGCTTGTaGCCTCCGATTCCGAGAGCG +
Preference number: 5 (lower is better)
Translates to: NGTWCLVRSPREWWGWVAMRAGL*PPIPRA
Trigger: CGCTCTCGGAATCGGAGGCAACAAGCCAGCTCTCAT...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCCTTGAGCACTGCAGGTaGAGGCTGCAGTTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: NGTWCLVRSPREWWGWVALEHCR*RLQLAL
Trigger: CAGGGCTAACTGCAGCCTCAACCTGCAGTGCTCAAG...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp GCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGGGCGATGGAAAGGCCTATTaGGACAGAGACATGGGTCTA +
Preference number: 5 (lower is better)
Translates to: ARGAWSGAHGSGGDGWPGDGKAY*DRDMGL
Trigger: TAGACCCATGTCTCTGTCCAAATAGGCCTTTCCATC...GCCCGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp ATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCGAGGAAGGAGAATTGCTaGAACTCTGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: MARGAWSGAHGSGGDGWPRKENC*NSGGRG
Trigger: ACCTCTGCCTCCAGAGTTCAAGCAATTCTCCTTCCT...CGGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp AATGGCACGTGGTGCTTGGTCAGGAGCCCACGGGAGTGGTGGGGATGGGTGGCCCGAGTTGCCAAATCTTaGGATTTTTCAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: NGTWCLVRSPREWWGWVARVAKS*DFSKDT
Trigger: GGTGTCTTTTGAAAAATCCAAAGATTTGGCAACTCG...GGCCACCCATCCCCACCACTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp GAGCAAAACCCCATCACACACACACACACACAAAGACAATGGAAGCCAGGCATGATGAGAGCTGGCTTGTaGCCTCCGATTCCGAGAGCG +
Preference number: 5 (lower is better)
Translates to: EQNPITHTHTQRQWKPGMMRAGL*PPIPRA
Trigger: CGCTCTCGGAATCGGAGGCAACAAGCCAGCTCTCAT...CATGCCTGGCTTCCATTGTCTTTGTGTGTGTGTGTGTGTGATGGGGTTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp CCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGGTGGTCAGTAGAGGGGGCCTaGGAGAGCCCTGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PVHSHRILTWAVKRQWRWSVEGA*ESPGQW
Trigger: CCACTGCCCAGGGCTCTCCAAGGCCCCCTCTACTGA...CCACCTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAATGGCACGTGGTGCTaGGTCAGGAGCCCACGGGAG +
Preference number: 5 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKNGTWC*VRSPRE
Trigger: CTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAACCCCGGTGCGGTGCCTaGGACAGCTGCTCCCAACCA +
Preference number: 5 (lower is better)
Translates to: FANSNDHRNSASHINEREPRCGA*DSCSQP
Trigger: TGGTTGGGAGCAGCTGTCCAAGGCACCGCACCGGGG...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp AGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGACAATGGAGAATGGCACGTGGTGCTaGGTCAGGAGCCCACGGGAG +
Preference number: 5 (lower is better)
Translates to: RSSTQSQDFNLGSKKTMENGTWC*VRSPRE
Trigger: CTCCCGTGGGCTCCTGACCAAGCACCACGTGCCATT...CTCCATTGTCTTTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAGGAATCTGGGTCCGTTaGTGTCTGACATTTCGCCAC +
Preference number: 5 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKGIWVR*CLTFRH
Trigger: GTGGCGAAATGTCAGACACAAACGGACCCAGATTCC...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395091.3
CDS-3UTR CAA 90 bp AACCGCAGGCCAGATCCAGTACACAGTCACAGGATTTTAACTTGGGCAGTAAAAAGGAAGGAGAATTGCTaGAACTCTGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: NRRPDPVHSHRILTWAVKRKENC*NSGGRG
Trigger: ACCTCTGCCTCCAGAGTTCAAGCAATTCTCCTTCCT...TTTTACTGCCCAAGTTAAAATCCTGTGACTGTGTACTGGATCTGGCCTGCGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp GCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAAATGGAGATGAGAGCTGGCTaGTTGCCTCCGATTCCGAGA +
Preference number: 5 (lower is better)
Translates to: ANSNDHRNSASHINEREMEMRAG*LPPIPR
Trigger: TCTCGGAATCGGAGGCAACAAGCCAGCTCTCATCTC...CATTTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3
CDS-3UTR CAA 90 bp TTTGCAAACTCAAATGACCATAGGAACTCAGCAAGTCATATAAATGAGCGGGAACGAGTTGCCAAATCTTaGGATTTTTCAAAAGACACC +
Preference number: 5 (lower is better)
Translates to: FANSNDHRNSASHINERERVAKS*DFSKDT
Trigger: GGTGTCTTTTGAAAAATCCAAAGATTTGGCAACTCG...TTCCCGCTCATTTATATGACTTGCTGAGTTCCTATGGTCATTTGAGTTTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252797.6
ENST00000395091.3