RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF747 (Homo sapiens)

Ensembl gene IDs: ENSG00000169955

Ensembl transcript IDs: ENST00000252799.3, ENST00000395094.3, ENST00000568028.1

Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACTGTTTTaGCACAGACATGGGTTCAAGAAATACTTCCCTTTCTTCTTTGCT +
Preference number: 1 (lower is better)
Translates to: KDGAYLKTGKMQGLF*HRHGFKKYFPFFFA
Trigger: AGCAAAGAAGAAAGGGAAGTATTTCTTGAACCCATGTCTGTGTCAAAACAGTCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR TCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGCGCCGTGCGGCGCATaGAGGCCCGACCACACTCGG +
Preference number: 2 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRAPCGA*RPDHTR
Trigger: CCGAGTGTGGTCGGGCCTTCATGCGCCGCACGGCGC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR TCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGCGCCGTGCGGCGCATaGAGGCCCGACCACACTCGG +
Preference number: 2 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGAPCGA*RPDHTR
Trigger: CCGAGTGTGGTCGGGCCTTCATGCGCCGCACGGCGC...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCGGGCCTTGGACAGCTaGTCCAACCCGGCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRRALDS*SNPAKG
Trigger: CCCCTTTGCCGGGTTGGAGCAGCTGTCCAAGGCCCG...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTGGCCGATGGACCCATTaGTGCTTGGCCATGCCGGTC +
Preference number: 2 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRGRWTH*CLAMPV
Trigger: GACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTGGACCCATTGGTGCTTaGCCATGCCGGTCTTCAGGC +
Preference number: 2 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRGPIGA*PCRSSG
Trigger: GCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCC...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTATTGGTGCTTGGCCATaGCGGTCTTCAGGCCGAAGC +
Preference number: 2 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRIGAWP*RSSGRS
Trigger: GCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAAT...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTTTCTCACCTCAGCCCTaGCTCAGCAAAGGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRFSPQP*LSKGGL
Trigger: AAGGCCCCCTTTGCTGAGGCAGGGCTGAGGTGAGAA...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCCCAGTTCACACCACTaGATTCCAGCCTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRPSSHH*IPAWVR
Trigger: CCTCACCCAGGCTGGAATGCAGTGGTGTGAACTGGG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGATCCGGCGCCGGGCCTTaGACAGCTGCTCCAACCCGG +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGSGAGP*TAAPTR
Trigger: CCGGGTTGGAGCAGCTGTCCAAGGCCCGGCGCCGGA...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGATCGCCCCCGGGCCGATaGACCCATTGGTGCTTGGCC +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGSPPGR*THWCLA
Trigger: GGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGA...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACGGGCCTTGGACAGCTaGTCCAACCCGGCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGRALDS*SNPAKG
Trigger: CCCCTTTGCCGGGTTGGAGCAGCTGTCCAAGGCCCG...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR TCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAAGGTCTAGGCTGCAGTaGGCCCAGTTCACACCACTG +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGRSRLQ*AQFTPL
Trigger: CAGTGGTGTGAACTGGGCTCACTGCAGCCTAGACCT...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAATTGGTGCTTGGCCATaGCGGTCTTCAGGCCGAAGC +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGIGAWP*RSSGRS
Trigger: GCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAAT...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACGATGGACCCATTGGTaGTTGGCCATGCCGGTCTTC +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGRWTHW*LAMPVF
Trigger: GAAGACCGGCATGGCCAAGCACCAATGGGTCCATCG...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGATTCTCACCTCAGCCCTaGCTCAGCAAAGGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGFSPQP*LSKGGL
Trigger: AAGGCCCCCTTTGCTGAGGCAGGGCTGAGGTGAGAA...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACCCAGTTCACACCACTaGATTCCAGCCTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGPSSHH*IPAWVR
Trigger: CCTCACCCAGGCTGGAATGCAGTGGTGTGAACTGGG...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTGTTTTGACACAGACATaGGTTCAAGAAATACTTCCC +
Preference number: 2 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRVLTQT*VQEILP
Trigger: GGGAAGTATTTCTTGAACCCATGTCTGTGTCAAAAC...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR TCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGCAGCAAAAAGACAATaGAGGCCAGTGCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGAAKRQ*RPVQWL
Trigger: GAGCCACTGCACTGGCCTTCATTGTCTTTTTGCTGC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGACAATGAAGGCCAGTaGAGTGGCTCCCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGDNEGQ*SGSPVI
Trigger: GATTACAGGGGAGCCACTGCACTGGCCTTCATTGTC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR CAA 90 bp CAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACTGTTTaGACACAGACATGGGTTCAAGAAATACTTCCCTTTCTTCTTTGC +
Preference number: 2 (lower is better)
Translates to: QRWCVPKDRKDARTV*TQTWVQEILPFLLC
Trigger: GCAAAGAAGAAAGGGAAGTATTTCTTGAACCCATGTCTGTGTCAAAACAGTCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACTTAAAAACACTGCCTaGGCCCAAATCAATACAGCA +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGLKNTA*AQINTA
Trigger: TGCTGTATTGATTTGGGCCCAGGCAGTGTTTTTAAG...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGTTTTGACACAGACATaGGTTCAAGAAATACTTCCC +
Preference number: 2 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGVLTQT*VQEILP
Trigger: GGGAAGTATTTCTTGAACCCATGTCTGTGTCAAAAC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CAA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCTCCGGCGCCGGGCCTaGGACAGCTGCTCCAACCCG +
Preference number: 3 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRLRRRA*DSCSNP
Trigger: CGGGTTGGAGCAGCTGTCCAAGGCCCGGCGCCGGAG...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR CCA 72 bp GCCCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTaGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCCAC +
Preference number: 3 (lower is better)
Translates to: APRPRADGPIGA*PCRSSGRSSGH
Trigger: GTGGCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR GCA 72 bp CGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATaGCGGTCTTCAGGCCGAAGCAGCGGCCACACTGCG +
Preference number: 3 (lower is better)
Translates to: RPRADGPIGAWP*RSSGRSSGHTA
Trigger: CGCAGTGTGGCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR GCA 72 bp CTACGCCCCTCGCCCCCGGGCCGATGGACCCATTGGTaGTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGG +
Preference number: 3 (lower is better)
Translates to: LRPSPPGRWTHW*LAMPVFRPKQR
Trigger: CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCGTAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR GCA 72 bp GCAGGTCTAGGCTGCAGTGAGCCCAGTTCACACCACTaGATTCCAGCCTGGGTGAGGAGCAAGATGCTGTCT +
Preference number: 3 (lower is better)
Translates to: AGLGCSEPSSHH*IPAWVRSKMLS
Trigger: AGACAGCATCTTGCTCCTCACCCAGGCTGGAATGCAGTGGTGTGAACTGGGCTCACTGCAGCCTAGACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR TCA 72 bp AGGCCAAGGTGGGCGAATTGCTTGAACCGAGGAGTTTaGGACCAGCCTGATCAACATAGTGGGAACCCCATC +
Preference number: 3 (lower is better)
Translates to: RPRWANCLNRGV*DQPDQHSGNPI
Trigger: GATGGGGTTCCCACTATGTTGATCAGGCTGGTCTCAAACTCCTCGGTTCAAGCAATTCGCCCACCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CAA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTAGGCAGGAGAATCGCTaGACTCCAGGAGGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRRQENR*TPGGGS
Trigger: ACTTCCACCTCCTGGAGTCAAGCGATTCTCCTGCCT...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CAA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTAACAGACAATGGGTATaGTCTTGTGGGAAGGTCAAA +
Preference number: 3 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRNRQWV*SCGKVK
Trigger: TTTGACCTTCCCACAAGACAATACCCATTGTCTGTT...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CAA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTACAATGGGTATTGTCTaGTGGGAAGGTCAAAGAATA +
Preference number: 3 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRTMGIV*WEGQRI
Trigger: TATTCTTTGACCTTCCCACAAGACAATACCCATTGT...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR CCA 72 bp GACAGGAAAGATGCAAGGACTGTTTTGACACAGACATaGGTTCAAGAAATACTTCCCTTTCTTCTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: DRKDARTVLTQT*VQEILPFLLCC
Trigger: ACAGCAAAGAAGAAAGGGAAGTATTTCTTGAACCCATGTCTGTGTCAAAACAGTCCTTGCATCTTTCCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR-3UTR CAA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAACAATGGGTATTGTCTaGTGGGAAGGTCAAAGAATA +
Preference number: 3 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGTMGIV*WEGQRI
Trigger: TATTCTTTGACCTTCCCACAAGACAATACCCATTGT...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
3UTR CAA 72 bp CGCCCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTaGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RPSPPGRWTHWC*AMPVFRPKQRP
Trigger: TGGCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCTCCGGCCCCGCCAGGTaGGGCGGCGCAGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGSGPAR*GGAAQS
Trigger: GCTCTGAGCTGCGCCGCCTCACCTGGCGGGGCCGGA...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGTCCGGCGCCGGGCCTTaGACAGCTGCTCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRSGAGP*TAAPTR
Trigger: CCGGGTTGGAGCAGCTGTCCAAGGCCCGGCGCCGGA...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGGCCAGGCCTGGGCATaGGGAACCTCCCGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGGQAWA*GTSRAR
Trigger: TCGGGCGCGGGAGGTTCCGCATGCCCAGGCCTGGCC...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGCTTCCGCCCGGGTTTaGGGGAACAAAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRASARV*GNKAAP
Trigger: GGGCGCTGCTTTGTTCCCGCAAACCCGGGCGGAAGC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGGCCGATGGACCCATTaGTGCTTGGCCATGCCGGTC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRGRWTH*CLAMPV
Trigger: GACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCTCGCCCCCGGGCCGATaGACCCATTGGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGSPPGR*THWCLA
Trigger: GGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGA...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGGGCCTTGGACAGCTaGTCCAACCCGGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRRALDS*SNPAKG
Trigger: CCCCTTTGCCGGGTTGGAGCAGCTGTCCAAGGCCCG...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGATCGGTCATCTCCCCTaGCCAGGCCTGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRIGHLP*PGLGMR
Trigger: CCGCATGCCCAGGCCTGGCCAGGGGAGATGACCGAT...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGGACCCATTGGTGCTTaGCCATGCCGGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRGPIGA*PCRSSG
Trigger: GCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCGGACCACAGTAAGTTaGGAGTTCTGGCTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRRTTVS*EFWLRP
Trigger: GGGCCGGAGCCAGAACTCCCAACTTACTGTGGTCCG...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGAGGTCTAGGCTGCAGTaGGCCCAGTTCACACCACTG +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRRSRLQ*AQFTPL
Trigger: CAGTGGTGTGAACTGGGCTCACTGCAGCCTAGACCT...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGATTGGTGCTTGGCCATaGCGGTCTTCAGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRIGAWP*RSSGRS
Trigger: GCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAAT...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCCAGTTCACACCACTaGATTCCAGCCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRPSSHH*IPAWVR
Trigger: CCTCACCCAGGCTGGAATGCAGTGGTGTGAACTGGG...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGATCCAAAATGGCCGTTaGGGCTACAGGCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRIQNGR*GYRRRP
Trigger: AGGCCGGCGCCTGTAGCCGCAACGGCCATTTTGGAT...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR GCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCTAAGGGCCGATGGCTaGGAGTCCATGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRLRADG*ESMVRT
Trigger: AGTTCTGACCATGGACTCGCAGCCATCGGCCCTTAG...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGTGCCCTAATCCAAAATaGCCGTTGCGGCTACAGGCG +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRCPNPK*PLRLQA
Trigger: CGCCTGTAGCCGCAACGGCCATTTTGGATTAGGGCA...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCACTGCATTCCAGCCTaGGTGAGGAGCAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRHCIPA*VRSKML
Trigger: CAGCATCTTGCTCCTCACCCAGGCTGGAATGCAGTG...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGAGGTCTAGGCTGCAGTaGGCCCAGTTCACACCACTG +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRRSRLQ*AQFTPL
Trigger: CAGTGGTGTGAACTGGGCTCACTGCAGCCTAGACCT...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGAGCCCCCTCTGCCCATaGTGGCACATACTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRSPLCP*WHILKD
Trigger: GTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCT...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGATGGACCCATTGGTaGTTGGCCATGCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRRWTHW*LAMPVF
Trigger: GAAGACCGGCATGGCCAAGCACCAATGGGTCCATCG...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCCCCAGTTCACACCACTaGATTCCAGCCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGPSSHH*IPAWVR
Trigger: CCTCACCCAGGCTGGAATGCAGTGGTGTGAACTGGG...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGATGGCTGCGAGTCCATaGTCAGAACTGGACGATGTC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRMAASP*SELDDV
Trigger: GACATCGTCCAGTTCTGACCATGGACTCGCAGCCAT...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCATCTCTGGATACAGCTaGAAGCCCACAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGISGYS*KPTGGS
Trigger: GGACCCGCCTGTGGGCTTCCAGCTGTATCCAGAGAT...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGACTTGGGGATACAGATaGGTACGGTTGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRTWGYR*VRLPLA
Trigger: AGCCAGTGGCAACCGTACCCATCTGTATCCCCAAGT...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGGAAGGCAGCCCTCGTaGACTCAGAAGTTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRGRQPS*TQKLVF
Trigger: GAAAACTAACTTCTGAGTTCACGAGGGCTGCCTTCC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR TCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGGCATTCCAGCCTGGGTaGGGAGCAAGATGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRAFQPG*GARCCL
Trigger: AAGACAGCATCTTGCTCCTCACCCAGGCTGGAATGC...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCACTGCATTCCAGCCTaGGTGAGGAGCAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRHCIPA*VRSKML
Trigger: CAGCATCTTGCTCCTCACCCAGGCTGGAATGCAGTG...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCTTGTTTCTGGAATCTaGGTCCGCTTCTGTCGGACA +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRLVSGI*VRFCRT
Trigger: TGTCCGACAGAAGCGGACCCAGATTCCAGAAACAAG...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395094.3
CDS-3UTR TCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTGCGCCGTGCGGCGCATaGAGGCCCGACCACACTCGG +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRAPCGA*RPDHTR
Trigger: CCGAGTGTGGTCGGGCCTTCATGCGCCGCACGGCGC...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGCAGCAAAAAGACAATaGAGGCCAGTGCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGAAKRQ*RPVQWL
Trigger: GAGCCACTGCACTGGCCTTCATTGTCTTTTTGCTGC...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGAGCCCCCTCTGCCCATaGTGGCACATACTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRSPLCP*WHILKD
Trigger: GTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCT...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGTGGATAATGGAGTCGTaGAGTGCTGGAGGGATTCCG +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRWIMES*SAGGIP
Trigger: CGGAATCCCTCCAGCACTTCACGACTCCATTATCCA...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGTCTTCTCACCCCATGTaGCCCTGTGATAAAGTGACA +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRSSHPM*PCDKVT
Trigger: TGTCACTTTATCACAGGGGCACATGGGGTGAGAAGA...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGATGGCTGCGAGTCCATaGTCAGAACTGGACGATGTC +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRMAASP*SELDDV
Trigger: GACATCGTCCAGTTCTGACCATGGACTCGCAGCCAT...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCACTTGGGGATACAGATaGGTACGGTTGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGTWGYR*VRLPLA
Trigger: AGCCAGTGGCAACCGTACCCATCTGTATCCCCAAGT...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCCCTCTTCCTTGTTTCTaGAATCTGCTGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGPLPCF*NLLGPL
Trigger: AAGCGGACCCAGCAGATTCCAGAAACAAGGAAGAGG...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR GCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGTCTTCTCACCCCATGTaGCCCTGTGATAAAGTGACA +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRSSHPM*PCDKVT
Trigger: TGTCACTTTATCACAGGGGCACATGGGGTGAGAAGA...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGATGCAAGGACTGTTTTaGCACAGACATGGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRMQGLF*HRHGFK
Trigger: CTTGAACCCATGTCTGTGTCAAAACAGTCCTTGCAT...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCATGCAAGGACTGTTTTaGCACAGACATGGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGMQGLF*HRHGFK
Trigger: CTTGAACCCATGTCTGTGTCAAAACAGTCCTTGCAT...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTATCGGTCATCTCCCCTaGCCAGGCCTGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRIGHLP*PGLGMR
Trigger: CCGCATGCCCAGGCCTGGCCAGGGGAGATGACCGAT...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGTTTTGACACAGACATaGGTTCAAGAAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRVLTQT*VQEILP
Trigger: GGGAAGTATTTCTTGAACCCATGTCTGTGTCAAAAC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCTTAAAAACACTGCCTaGGCCCAAATCAATACAGCA +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRLKNTA*AQINTA
Trigger: TGCTGTATTGATTTGGGCCCAGGCAGTGTTTTTAAG...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGTCCATGGTCAGAACTaGACGATGTCTTCAAATAAA +
Preference number: 4 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGVHGQN*TMSSNK
Trigger: TTTATTTGAAGACATCGTCCAGTTCTGACCATGGAC...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGGAGATGCCAGAAACCTaGATTTTGGTGCAAAATATC +
Preference number: 4 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQREMPET*ILVQNI
Trigger: GATATTTTGCACCAAAATCCAGGTTTCTGGCATCTC...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCGGACCACAGTAAGTTaGGAGTTCTGGCTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRRTTVS*EFWLRP
Trigger: GGGCCGGAGCCAGAACTCCCAACTTACTGTGGTCCG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCGACCTCTCGACCTTTaGCCCTGCGCAATTGTACCC +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRRPLDL*PCAIVP
Trigger: GGGTACAATTGCGCAGGGGCAAAGGTCGAGAGGTCG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGGCCAGGCCTGGGCATaGGGAACCTCCCGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGGQAWA*GTSRAR
Trigger: TCGGGCGCGGGAGGTTCCGCATGCCCAGGCCTGGCC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCGATGGACCCATTGGTaGTTGGCCATGCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRRWTHW*LAMPVF
Trigger: GAAGACCGGCATGGCCAAGCACCAATGGGTCCATCG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCCAGCAGGTCTAGGCTaGAGTGAGCCCAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRPAGLG*SEPSSH
Trigger: GTGTGAACTGGGCTCACTGCAGCCTAGACCTGCTGG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTGTTTCTGGAATCTGCTaGGTCCGCTTCTGTCGGACA +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRVSGIC*VRFCRT
Trigger: TGTCCGACAGAAGCGGACCCAGCAGATTCCAGAAAC...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR TCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGATTGAGGACGCGCGCGTaGCAGCCTCAGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGLRTRA*QPQEVL
Trigger: GAGGACTTCCTGAGGCTGTCACGCGCGCGTCCTCAA...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGGCCGATGGACCCATTaGTGCTTGGCCATGCCGGTC +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGGRWTH*CLAMPV
Trigger: GACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACGACCTCTCGACCTTTaGCCCTGCGCAATTGTACCC +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGRPLDL*PCAIVP
Trigger: GGGTACAATTGCGCAGGGGCAAAGGTCGAGAGGTCG...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAATCTCTGGATACAGCTaGAAGCCCACAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGISGYS*KPTGGS
Trigger: GGACCCGCCTGTGGGCTTCCAGCTGTATCCAGAGAT...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCTTAAAAACACTGCCTaGGCCCAAATCAATACAGCA +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRLKNTA*AQINTA
Trigger: TGCTGTATTGATTTGGGCCCAGGCAGTGTTTTTAAG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGAAACTAAGGGCCGATaGCTGCGAGTCCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGETKGR*LRVHGQ
Trigger: CTGACCATGGACTCGCAGCCATCGGCCCTTAGTTTC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGATTCCAGCTACTTGGGTaGCTGAGGCAGGAGAATCGC +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGFQLLG*LRQENR
Trigger: GCGATTCTCCTGCCTCAGCCACCCAAGTAGCTGGAA...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTGAGATGCCAGAAACCTaGATTTTGGTGCAAAATATC +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVREMPET*ILVQNI
Trigger: GATATTTTGCACCAAAATCCAGGTTTCTGGCATCTC...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR TCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGATGGATAATGGAGTCGTaGAGTGCTGGAGGGATTCCG +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGWIMES*SAGGIP
Trigger: CGGAATCCCTCCAGCACTTCACGACTCCATTATCCA...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR GCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACTTGTTTCTGGAATCTaGTGGGTCCGCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGLVSGI*WVRFCR
Trigger: CCGACAGAAGCGGACCCAGCAGATTCCAGAAACAAG...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCTGGAAATTAAAACCTaGTACAAAGGTATCTCCTAC +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRLEIKT*YKGISY
Trigger: GTAGGAGATACCTTTGTACCAGGTTTTAATTTCCAG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTAACTTGCGAAATCTTTaGATTTTTCAAGAGATGCCA +
Preference number: 4 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRNLRNL*IFQEMP
Trigger: TGGCATCTCTTGAAAAATCCAAAGATTTCGCAAGTT...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CCA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGACCTCTTCCTTGTTTCTaGAATCTGGGTCCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGPLPCF*NLGPLL
Trigger: CAGAAGCGGACCCAGATTCCAGAAACAAGGAAGAGG...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395094.3
CDS-3UTR CAA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGGGCCGATGGACCCATaGGTGCTTGGCCATGCCGGT +
Preference number: 5 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRGPMDP*VLGHAG
Trigger: ACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGGGGCAGGAGGATTCCTaGAGCCCAGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRGQEDS*SPAGLG
Trigger: GCCTAGACCTGCTGGGCTCAAGGAATCCTCCTGCCC...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGTGGACCCATTGGTGCTaGGCCATGCCGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRWTHWC*AMPVFR
Trigger: CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCA...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGGGGCCGATGGACCCATaGGTGCTTGGCCATGCCGGT +
Preference number: 5 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRGPMDP*VLGHAG
Trigger: ACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCC...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGGGGCAGGAGGATTCCTaGAGCCCAGCAGGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRGQEDS*SPAGLG
Trigger: GCCTAGACCTGCTGGGCTCAAGGAATCCTCCTGCCC...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGCGACCTCTCGACCTTaGCCCCTGCGCAATTGTACC +
Preference number: 5 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGATSRP*PLRNCT
Trigger: GGTACAATTGCGCAGGGGCAAAGGTCGAGAGGTCGC...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGAGGCAGGAGAATCGCTaGACTCCAGGAGGTGGAAGT +
Preference number: 5 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRRQENR*TPGGGS
Trigger: ACTTCCACCTCCTGGAGTCAAGCGATTCTCCTGCCT...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp CCCTCGCCCCCGGGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGACAGATCTCAATTACTaGCCAAGGTTGAGGACGCGC +
Preference number: 5 (lower is better)
Translates to: PSPPGRWTHWCLAMPVFRTDLNY*PRLRTR
Trigger: GCGCGTCCTCAACCTTGGCAAGTAATTGAGATCTGT...CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CAA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTCTCCGGCGCCGGGCCTaGGACAGCTGCTCCAACCCG +
Preference number: 5 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRLRRRA*DSCSNP
Trigger: CGGGTTGGAGCAGCTGTCCAAGGCCCGGCGCCGGAG...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp GGCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCATCACTGTCTCGTTTaGTCCTCAGAAACGGCGACA +
Preference number: 5 (lower is better)
Translates to: GRWTHWCLAMPVFRPKQRHHCLV*SSETAT
Trigger: TGTCGCCGTTTCTGAGGACAAAACGAGACAGTGATG...CCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CAA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTGAGATGAGCGCCGGCTaGCTGCCTCCGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVREMSAG*LPPTPG
Trigger: CCCAGGAGTCGGAGGCAGCAAGCCGGCGCTCATCTC...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCAGCCTCTTCCCAATGTaGAGAGCAAAAAGTGTGAAC +
Preference number: 5 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGSLFPM*RAKSVN
Trigger: GTTCACACTTTTTGCTCTCAACATTGGGAAGAGGCT...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CAA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGATGCAAGGACTGTTTaGACACAGACATGGGTTCAA +
Preference number: 5 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGDARTV*TQTWVQ
Trigger: TTGAACCCATGTCTGTGTCAAAACAGTCCTTGCATC...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS CCA 90 bp GGGATGGAAACTAAGGGCCGATGGCTGCGAGTCCATGGTCAGAACTaGACGATGTCTTCAAATAAAACGGCGGCAGCGCGACCTCTCGAC +
Preference number: 5 (lower is better)
Translates to: GMETKGRWLRVHGQN*TMSSNKTAAARPLD
Trigger: GTCGAGAGGTCGCGCTGCCGCCGTTTTATTTGAAGACATCGTCCAGTTCTGACCATGGACTCGCAGCCATCGGCCCTTAGTTTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252799.3
ENST00000395094.3
ENST00000568028.1
CDS-3UTR CAA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTAATCCAAAATGGCCGTaGCGGCTACAGGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRNPKWP*RLQAPA
Trigger: GGCCGGCGCCTGTAGCCGCAACGGCCATTTTGGATT...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CAA 90 bp CTAGCCCCCTCTGCCCATGATGGCACATACTTAAAGACAGCAAAGATGGTGCGTTTTGCCCCTGCGCAATaGTACCCACGACGACGCCCC +
Preference number: 5 (lower is better)
Translates to: LAPSAHDGTYLKTAKMVRFAPAQ*YPRRRP
Trigger: GGGGCGTCGTCGTGGGTACAATTGCGCAGGGGCAAA...ACGCACCATCTTTGCTGTCTTTAAGTATGTGCCATCATGGGCAGAGGGGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp GCCGATGGACCCATTGGTGCTTGGCCATGCCGGTCTTCAGGCCGAAGCAGCGGCGAACTTGCGAAATCTTaGGATTTTTCAAGAGATGCC +
Preference number: 5 (lower is better)
Translates to: ADGPIGAWPCRSSGRSSGELAKS*DFSRDA
Trigger: GGCATCTCTTGAAAAATCCAAAGATTTCGCAAGTTC...GCCGCTGCTTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS CCA 90 bp AGAGCCCCCGAAGGCCCACTAGAGGGGATGGAAACTAAGGGCCGATaGCTGCGAGTCCATGGTCAGAACTGGACGATGTCTTCAAATAAA +
Preference number: 5 (lower is better)
Translates to: RAPEGPLEGMETKGR*LRVHGQNWTMSSNK
Trigger: TTTATTTGAAGACATCGTCCAGTTCTGACCATGGACTCGCAGCCATCGGCCCTTAGTTTCCATCCCCTCTAGTGGGCCTTCGGGGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252799.3
ENST00000395094.3
ENST00000568028.1
CDS TCA 90 bp GTGAACCCAGAAATTCCGAGACAGATCTCAATTACTTGCCAAGGTTaGGGACGCGCGCGTGACAGCCTCAGGAAGTCCTCACGACATGTG +
Preference number: 5 (lower is better)
Translates to: VNPEIPRQISITCQG*GRARDSLRKSSRHV
Trigger: CACATGTCGTGAGGACTTCCTGAGGCTGTCACGCGCGCGTCCTCAACCTTGGCAAGTAATTGAGATCTGTCTCGGAATTTCTGGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CAA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGAGATGAGCGCCGGCTaGCTGCCTCCGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGEMSAG*LPPTPG
Trigger: CCCAGGAGTCGGAGGCAGCAAGCCGGCGCTCATCTC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAAGCTTCCGCCCGGGTTaGCGGGAACAAAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGSFRPG*REQSSA
Trigger: GGCGCTGCTTTGTTCCCGCAAACCCGGGCGGAAGCT...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS-3UTR CAA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGCGACCTCTCGACCTTaGCCCCTGCGCAATTGTACC +
Preference number: 5 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGATSRP*PLRNCT
Trigger: GGTACAATTGCGCAGGGGCAAAGGTCGAGAGGTCGC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGATGGACCCATTGGTGCTaGGCCATGCCGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGWTHWC*AMPVFR
Trigger: CCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCA...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS-3UTR CAA 90 bp ATACTTAAAGACAGCAAAGATGGTGCGTACCTAAAGACAGGAAAGATGCAAGGAGATGCAAGGACTGTTTaGACACAGACATGGGTTCAA +
Preference number: 5 (lower is better)
Translates to: ILKDSKDGAYLKTGKMQGDARTV*TQTWVQ
Trigger: TTGAACCCATGTCTGTGTCAAAACAGTCCTTGCATC...TCCTTGCATCTTTCCTGTCTTTAGGTACGCACCATCTTTGCTGTCTTTAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252799.3
ENST00000395094.3
CDS GCA 72 bp GGTGAGGCGGCGCAGCTCAGAGCTTCCGCCCGGGTTTaGGGGAACAAAGCAGCGCCCTGCGGAAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: GEAAQLRASARV*GNKAAPCGRQP
Trigger: GGGCTGCCTTCCGCAGGGCGCTGCTTTGTTCCCGCAAACCCGGGCGGAAGCTCTGAGCTGCGCCGCCTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS CCA 72 bp GAAGGCCCACTAGAGGGGATGGAAACTAAGGGCCGATaGCTGCGAGTCCATGGTCAGAACTGGACGATGTCT +
Preference number: 6 (lower is better)
Translates to: EGPLEGMETKGR*LRVHGQNWTMS
Trigger: AGACATCGTCCAGTTCTGACCATGGACTCGCAGCCATCGGCCCTTAGTTTCCATCCCCTCTAGTGGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252799.3
ENST00000395094.3
ENST00000568028.1
CDS CCA 72 bp ACTAAGGGCCGATGGCTGCGAGTCCATGGTCAGAACTaGACGATGTCTTCAAATAAAACGGCGGCAGCGCGA +
Preference number: 6 (lower is better)
Translates to: TKGRWLRVHGQN*TMSSNKTAAAR
Trigger: TCGCGCTGCCGCCGTTTTATTTGAAGACATCGTCCAGTTCTGACCATGGACTCGCAGCCATCGGCCCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252799.3
ENST00000395094.3
ENST00000568028.1
CDS TCA 72 bp GGGAACAAAGCAGCGCCCTGCGGAAGGCAGCCCTCGTaGACTCAGAAGTTAGTTTTCGTCTCTGGACCTTTT +
Preference number: 6 (lower is better)
Translates to: GNKAAPCGRQPS*TQKLVFVSGPF
Trigger: AAAAGGTCCAGAGACGAAAACTAACTTCTGAGTTCACGAGGGCTGCCTTCCGCAGGGCGCTGCTTTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252799.3
CDS TCA 72 bp GAAATTCCGAGACAGATCTCAATTACTTGCCAAGGTTaGGGACGCGCGCGTGACAGCCTCAGGAAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: EIPRQISITCQG*GRARDSLRKSS
Trigger: TGAGGACTTCCTGAGGCTGTCACGCGCGCGTCCTCAACCTTGGCAAGTAATTGAGATCTGTCTCGGAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252799.3