RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF692 (Homo sapiens)

Ensembl gene IDs: ENSG00000171163

Ensembl transcript IDs: ENST00000306601.9, ENST00000366471.7, ENST00000412341.6, ENST00000451251.5, ENST00000462037.6, ENST00000463519.5, ENST00000470787.6, ENST00000476503.5, ENST00000477070.6, ENST00000478107.5, ENST00000482023.5, ENST00000483223.5, ENST00000483791.6, ENST00000495731.5, ENST00000496053.1, ENST00000496231.1, ENST00000496411.5, ENST00000497847.1, ENST00000528141.5, ENST00000530699.1, ENST00000530986.5, ENST00000533614.5, ENST00000533647.1, ENST00000533976.1, ENST00000534456.1, ENST00000534660.5

Found 913 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCCATCAGGTTACCTGGCCAGGGCCTCAGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGTGGCTGCACCCTGACTTCTGCAGGT +
Preference number: 1 (lower is better)
Translates to: QPSGYLARASVCWAA*GVLLSCGCTLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGACTGAGGCCCTGGCCAGGTAACCTGATGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR TCA 90 bp GGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGC +
Preference number: 1 (lower is better)
Translates to: GPRSPGTRLHSRLWA*DKSTRYCRPFGGKG
Trigger: GCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
3UTR GCA 90 bp CAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATC +
Preference number: 1 (lower is better)
Translates to: QGKRKAATVSACLRW*QFREAFWRQVNPHI
Trigger: GATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR GCA 90 bp CCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTA +
Preference number: 1 (lower is better)
Translates to: PQNSQGKRKAATVSA*LRWCQFREAFWRQV
Trigger: TACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR GCA 90 bp CTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCA +
Preference number: 1 (lower is better)
Translates to: LAAEFTGEAQGSHRL*MLALVPVQGSLLAA
Trigger: TGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 90 bp TCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCAT +
Preference number: 1 (lower is better)
Translates to: SQGKRKAATVSACLR*CQFREAFWRQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 90 bp GGGGGAAGCAGTCAGGCTGAACTGGGAAGTCTCCTCCTCTTACCCTaGAGAGCCATACCCAGGGAGCCCTGTTCCCTCAAACCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: GGSSQAELGSLLLLP*RAIPREPCSLKPQG
Trigger: GCCCTGGGGTTTGAGGGAACAGGGCTCCCTGGGTATGGCTCTCCAGGGTAAGAGGAGGAGACTTCCCAGTTCAGCCTGACTGCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR CCA 90 bp TCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTaGAGCAGACTGGGCCTGACTCCCAGTGCTACGGGCAGCAAAGAG +
Preference number: 1 (lower is better)
Translates to: SLGANLCSVLIPGRG*SRLGLTPSATGSKE
Trigger: CTCTTTGCTGCCCGTAGCACTGGGAGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR TCA 90 bp ACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGAGGGTCCCCAGGAGAAGGTATGGCC +
Preference number: 1 (lower is better)
Translates to: TSPSSMWKGGWLGCL*RCRAQRGSPGEGMA
Trigger: GGCCATACCTTCTCCTGGGGACCCTCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR GCA 90 bp TTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTG +
Preference number: 1 (lower is better)
Translates to: FCYGGLQHCLASQSA*RRIHRGSARQPPSL
Trigger: CAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR GCA 90 bp CACTGGGTGACTCTTGAGGGGCTAGAAGCAGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGC +
Preference number: 1 (lower is better)
Translates to: HWVTLEGLEAGLGDF*YGGLQHCLASQSAC
Trigger: GCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 90 bp ACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGTTTTTCT +
Preference number: 1 (lower is better)
Translates to: TVSACLRWCQFREAF*RQVNPHISHCRGFS
Trigger: AGAAAAACCCCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 90 bp AAGCAGGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAA +
Preference number: 1 (lower is better)
Translates to: KQGWVTFATVGCNTV*LLKALAAEFTGEAQ
Trigger: TTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 90 bp GCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTaGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGAGCTCATTGC +
Preference number: 1 (lower is better)
Translates to: AFLKQTLSLLLLFSP*SLASQSQSWRRAHC
Trigger: GCAATGAGCTCTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 90 bp GTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTaGCTCTGGGCAGGAGAAAGACTTCTGGTGGATGTGCTGGTACTT +
Preference number: 1 (lower is better)
Translates to: VLLQVFLKVERLPTG*LWAGERLLVDVLVL
Trigger: AAGTACCAGCACATCCACCAGAAGTCTTTCTCCTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR TCA 90 bp CCCAGTCCAATTTATCATTCTTCAGAACCTAGACACACTAGATCCTaGGACATTGCTCCCTTCCCCACCCAGAGGTTGCCTCCATCAAAC +
Preference number: 1 (lower is better)
Translates to: PSPIYHSSEPRHTRS*DIAPFPTQRLPPSN
Trigger: GTTTGATGGAGGCAACCTCTGGGTGGGGAAGGGAGCAATGTCTCAGGATCTAGTGTGTCTAGGTTCTGAAGAATGATAAATTGGACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR CCA 90 bp CTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTaGGCAGGAGAAAGACTTCTGGTGGATGTGCTGGTACTTTTTGTG +
Preference number: 1 (lower is better)
Translates to: LQVFLKVERLPTGWL*AGERLLVDVLVLFV
Trigger: CACAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTCCTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR TCA 90 bp CTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: LGRQAPEARAPGCTLGCGVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...CCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
3UTR CAA 90 bp GGCCTGACTCCCAGTGCTGGCCAGGGCCTCAGTCTGCTGGGCCGCTaGAGGGGTCCTGCTGAGCTGTGGCTGCACCCTGACTTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GLTPSAGQGLSLLGR*RGPAELWLHPDFCR
Trigger: CCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGACTGAGGCCCTGGCCAGCACTGGGAGTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR GCA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 2 (lower is better)
Translates to: AARPPKPGHQAALSAVGMKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR CAA 90 bp TCAGCCATCAGGTTACCTGGCCAGGGCCTCAGTCTGCTGGGCCGCTaGAGGGGTCCTGCTGAGCTGTGGCTGCACCCTGACTTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SAIRLPGQGLSLLGR*RGPAELWLHPDFCR
Trigger: CCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGACTGAGGCCCTGGCCAGGTAACCTGATGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR-3UTR TCA 90 bp AAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: KPGHQAALSAVGMRQEHQRAAIR*DHEEGS
Trigger: GCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCT...CTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528141.5
3UTR-3UTR CCA 90 bp CCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACAGAGGACACAGCCTTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: PPKPGHQAALSAAQRTQPSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...AGGCTGTGTCCTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533647.1
3UTR-3UTR TCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTTATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCT +
Preference number: 2 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTYSLRP*GGEQDP
Trigger: AGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATA...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
3UTR-3UTR CCA 90 bp CCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCCCTCCTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: PKPGHQAALSAVGMRQEHPSWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGGAGGG...GTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp GGTGTCTCCCCCTCTTTAGGTGTGCAGGTGACAGGGGAAGGCAGTAGTCTGGGGGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: GVSPSLGVQVTGEGSSLGGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...CCCCAGACTACTGCCTTCCCCTGTCACCTGCACACCTAAAGAGGGGGAGACACC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp AGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATTGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SACRRIHRGSARQPPSLHWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...ATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR TCA 90 bp CCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCAACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: PEARAPGCTLGCGHETRATEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...TGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
3UTR-3UTR CCA 90 bp AGGGAGGCTGGCTTGGGTGCCTCTGAAGGTGTAGGGCTCAAAGAGGGTCCCCAGGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 2 (lower is better)
Translates to: REAGLGASEGVGLKEGPQAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...CTGGGGACCCTCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCAGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp GGTGTCTCCCCCTCTTTAGGTGTGCAGGTGACAGGGGAAGGCAGTAGTCTGGGGAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: GVSPSLGVQVTGEGSSLGRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...CCCCAGACTACTGCCTTCCCCTGTCACCTGCACACCTAAAGAGGGGGAGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR GCA 90 bp GCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTCTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: ARQPPSLHACAGASSGKPLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...AGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR GCA 90 bp GGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 2 (lower is better)
Translates to: GGLQHCLASQSACRRIHRAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...CCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp GAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCATCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: EARAPGCTLGCGHETRAPSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...TGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp CGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCAGCCATCAGGTTACCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: RLPQNSQGKRKAATVSACSHQVT*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGGTAACCTGATGGCT...GCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR CAA 90 bp CAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAAC +
Preference number: 2 (lower is better)
Translates to: QNSQGKRKAATVSAC*RWCQFREAFWRQVN
Trigger: GTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR TCA 90 bp CTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: LQHCLASQSACRRIHRGSVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...GCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR GCA 90 bp TGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCATCCCAGGACGCCCCTaGCCTTTCTGTCTCAGCCAT +
Preference number: 2 (lower is better)
Translates to: CMLALVPVQGSLLAAGKPIPGRP*PFCLSH
Trigger: ATGGCTGAGACAGAAAGGGCAGGGGCGTCCTGGGAT...GGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR-3UTR GCA 90 bp CTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACATGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 2 (lower is better)
Translates to: LVPVQGSLLAAGKPAYLTWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...TGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp GCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTAAAGGAGGGTGTTTCTaGGTCACCCTGTGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: ARQPPSLHACAGASSGKPKGGCF*VTLWSL
Trigger: GAGGGACCACAGGGTGACCCAGAAACACCCTCCTTT...AGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR CAA 90 bp CTCGGCTGTGGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGACCTGGAGGGGTGGGGGAAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: LGCGHETRAPDTADL*EAKAQDLEGWGKQS
Trigger: TGACTGCTTCCCCCACCCCTCCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR GCA 90 bp GGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: GEAQGSHRLCMLALVPVQRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...CTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR GCA 90 bp GCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTCTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: ARQPPSLHACAGASSGKPLKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...AGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR GCA 90 bp TGGAGGGGTGGGGGAAGCAGTCAGGCTGAACTGGGAAGTCTCCTCCTCTTACCCTCCCCACCCAGAGGTTaGCTCCATCAAACTACCCTG +
Preference number: 2 (lower is better)
Translates to: WRGGGSSQAELGSLLLLPSPPRG*LHQTTL
Trigger: CAGGGTAGTTTGATGGAGGCAACCTCTGGGTGGGGA...GGGTAAGAGGAGGAGACTTCCCAGTTCAGCCTGACTGCTTCCCCCACCCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR CCA 90 bp CGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 2 (lower is better)
Translates to: RLCMLALVPVQGSLLAAGCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...ACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp CTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 2 (lower is better)
Translates to: LLLRWAATLSGFSKRLPQAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...CTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp ACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACAGCCTGGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 2 (lower is better)
Translates to: TADLLEAKAQDLHRGHSLAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...CAGGCTGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp TGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCCCTCCTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: WLLKALAAEFTGEAQGSHPSWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGGAGGG...GTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp ATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACATGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: IMLRFQICKLLPTRGLGTWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...TGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp CCCTCTTTAGGTGTGCAGGTGACAGGGGAAGGCAGTAGTCTGGGGGCATCAGGCTACCTCTTCCTCTCCTaGAGGTGGGAAGGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: PSLGVQVTGEGSSLGASGYLFLS*RWEGLW
Trigger: CCAGAGACCTTCCCACCTCCAGGAGAGGAAGAGGTA...GCCTGATGCCCCCAGACTACTGCCTTCCCCTGTCACCTGCACACCTAAAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000496411.5
3UTR-3UTR CCA 90 bp GGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: GLGDFCYGGLQHCLASQSECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...GCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp TCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTAGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: SASSCPLVASEHQLLRVVECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...TACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
3UTR CAA 90 bp CTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCT +
Preference number: 2 (lower is better)
Translates to: LLLRWAATLSGFSKR*PQNSQGKRKAATVS
Trigger: AGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CAA 90 bp TCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTAGGGCTCAAAGAGGGTCCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: SEHQLLRVVCGREAG*GASEGVGLKEGPQE
Trigger: CTCCTGGGGACCCTCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR TCA 90 bp CCTCTTGAGTCCTCTCATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: PLESSHHAQIPNLQAPAHVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...GTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGATGAGAGGACTCAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR TCA 90 bp TGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCAGACACACTAGATCCTaGGACATTGCTCCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: CMLALVPVQGSLLAAGKPRHTRS*DIAPFP
Trigger: GGGGAAGGGAGCAATGTCTCAGGATCTAGTGTGTCT...GGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR CCA 90 bp AAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCTGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 2 (lower is better)
Translates to: KALAAEFTGEAQGSHRLCWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...GCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp TTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: FCYGGLQHCLASQSACRRAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...TCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp TTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGACCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 2 (lower is better)
Translates to: FCYGGLQHCLASQSACRRPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...TCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR TCA 90 bp CTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 2 (lower is better)
Translates to: LQHCLASQSACRRIHRGSRRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...GCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR TCA 90 bp GGCTGCACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: GCTLTSAGGGALELNEDATEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...AGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR TCA 90 bp GTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 2 (lower is better)
Translates to: VASEHQLLRVVCGREAGLSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...CAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR GCA 90 bp ACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACAGCCTGAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 2 (lower is better)
Translates to: TADLLEAKAQDLHRGHSLKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...CAGGCTGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR GCA 90 bp AAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCCTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 2 (lower is better)
Translates to: KAATVSACLRWCQFREAFLRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR GCA 90 bp GCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGTCCCGGGTGTCAGAGTaGACCGTATTGGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: AATLSGFSKRLPQNSQGKSRVSE*TVLEVR
Trigger: CCTGACCTCCAATACGGTGCACTCTGACACCCGGGA...CTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp TTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: FQICKLLPTRGLGTPTSPSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...CGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGAGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 2 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp GGTTGGAGAAGATCCTTCCACAGCCAGGGAAGTCACAAGGCATCAGCTCTCTTTCAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 2 (lower is better)
Translates to: GWRRSFHSQGSHKASALFQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...AAAGAGAGCTGATGCCTTGTGACTTCCCTGGCTGTGGAAGGATCTTCTCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR CCA 90 bp ATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 2 (lower is better)
Translates to: IMLRFQICKLLPTRGLGTPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...TGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp GGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAT +
Preference number: 2 (lower is better)
Translates to: GLGDFCYGGLQHCLASQSGKAVV*GHQAHY
Trigger: ATAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...GCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR TCA 90 bp CAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: QIPNLQAPAHSWPRNTNFTEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR TCA 90 bp TACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACACTCAGGGCTCCCTTTaGAAGGAGGGTGTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: YGGLQHCLASQSACRRIHTQGSL*KEGVSG
Trigger: CCCAGAAACACCCTCCTTTCAAAGGGAGCCCTGAGT...GTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR TCA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGTATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCT +
Preference number: 2 (lower is better)
Translates to: GHETRAPDTADLLEAKAQYSLRP*GGEQDP
Trigger: AGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATA...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528141.5
3UTR-3UTR GCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCCCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 2 (lower is better)
Translates to: ISQADPLLVAPFQSLESGPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR GCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAACTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR GCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGCTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRLLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR GCA 90 bp GGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 2 (lower is better)
Translates to: GGLQHCLASQSACRRIHRASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...CCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR GCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCCATCAAACTACCCTGTaGTCCCCAACTCACCCCACC +
Preference number: 2 (lower is better)
Translates to: VALVPGDQASGISQADPLHQTTL*SPTHPT
Trigger: GGTGGGGTGAGTTGGGGAGCACAGGGTAGTTTGATG...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR CCA 90 bp TGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCTGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 2 (lower is better)
Translates to: CQFREAFWRQVNPHISHCWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...GCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp GAAGCAGGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 2 (lower is better)
Translates to: EAGLGDFCYGGLQHCLASCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...AGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp GGTTGGAGAAGATCCTTCCACAGCCAGGGAAGTCACAAGGCATCAGCTCTCTTTGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: GWRRSFHSQGSHKASALFECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...AAAGAGAGCTGATGCCTTGTGACTTCCCTGGCTGTGGAAGGATCTTCTCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp GGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCCAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: GLGDFCYGGLQHCLASQSQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...GCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp CAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGCCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 2 (lower is better)
Translates to: QFREAFWRQVNPHISHCRPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...CCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR GCA 90 bp TTTGTGGTGATTCAAATACTGCCGGTTGGAGAAGATCCTTCCACAGCCAGGGAAGGGCCTGACTCCCAGTaGTACGGGCAGCAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: FVVIQILPVGEDPSTAREGPDSQ*YGQQRG
Trigger: CCCTCTTTGCTGCCCGTAGCACTGGGAGTCAGGCCC...TTCCCTGGCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAATCACCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR-3UTR GCA 90 bp TGTGGCTGCACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATCTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CGCTLTSAGGGALELNEDLKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...ATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp ACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTGACAAGTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: TLTSAGGGALELNEDADKSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...CTTGTCAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp ACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACACCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 2 (lower is better)
Translates to: TVGCNTVWLLKALAAEFTPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...TGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp GGCTGCACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 2 (lower is better)
Translates to: GCTLTSAGGGALELNEDAILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...AGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
3UTR-3UTR TCA 90 bp CCTCTTGAGTCCTCTCATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: PLESSHHAQIPNLQAPAHTEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...GTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGATGAGAGGACTCAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR GCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR GCA 90 bp GTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: VDDKVAASAERPGAELTDRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...ATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: SQADPLLVAPFQSLESGFSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp AAGACTTCTGGTGGATGTGCTGGTACTTTTTGTGGTGATTCAAATACTGCCGGTGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 2 (lower is better)
Translates to: KTSGGCAGTFCGDSNTAGGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...ACCGGCAGTATTTGAATCACCACAAAAAGTACCAGCACATCCACCAGAAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp CAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: QLHVLLQVFLKVERLPTGRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...GCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAACAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR CCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGCAGTCAGGCTGAACTaGGAAGTCTCCTCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRAVRLN*EVSSSY
Trigger: GTAAGAGGAGGAGACTTCCCAGTTCAGCCTGACTGC...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR GCA 90 bp ATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACAAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: IMLRFQICKLLPTRGLGTRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...TGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR-3UTR GCA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGCTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 2 (lower is better)
Translates to: GHETRAPDTADLLEAKAQLRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLASVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 2 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLAWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 2 (lower is better)
Translates to: ISQADPLLVAPFQSLESGWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 2 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLACRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 2 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CCA 90 bp TTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGCCCTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 2 (lower is better)
Translates to: LSFRKTKVVQLPYSPVLPCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...GGGCAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
ENST00000476503.5
3UTR-3UTR CCA 90 bp TTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 2 (lower is better)
Translates to: FCYGGLQHCLASQSACRRVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...TCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR TCA 90 bp CTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACATGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 2 (lower is better)
Translates to: LVPVQGSLLAAGKPAYLTWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...TGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR CCA 90 bp GAAGTCACAAGGCATCAGCTCTCTTTTGGCAGCTTTCCTAATTCTCTTGGGGCCTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 2 (lower is better)
Translates to: EVTRHQLSFGSFPNSLGACRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...GGCCCCAAGAGAATTAGGAAAGCTGCCAAAAGAGAGCTGATGCCTTGTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR CCA 90 bp TTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAC +
Preference number: 2 (lower is better)
Translates to: FMCSFRCFLKLKDFPQAGGKAVV*GHQAHY
Trigger: GTAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...GCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412341.6
3UTR-3UTR CCA 90 bp TTTGTGGTGATTCAAATACTGCCGGTTGGAGAAGATCCTTCCACAGCCAGGGAATCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: FVVIQILPVGEDPSTARESVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...TTCCCTGGCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAATCACCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR CCA 90 bp ATTAGTTGTTATCCAAATCATGGAGCCCGTCTGGACCTCCCTTACCACTGTGCATGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 2 (lower is better)
Translates to: ISCYPNHGARLDLPYHCAWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...TGCACAGTGGTAAGGGAGGTCCAGACGGGCTCCATGATTTGGATAACAACTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412341.6
3UTR-3UTR CCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: ISQADPLLVAPFQSLESGSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR-3UTR CCA 90 bp TGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: CSFMCSFRCFLKLKDFPQSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...CTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR CAA 90 bp CAATTTATCATTCTTCAGAACCTAGACACACTAGATCCTGAGACATaGCTCCCTTCCCCACCCAGAGGTTGCCTCCATCAAACTACCCTG +
Preference number: 2 (lower is better)
Translates to: QFIILQNLDTLDPET*LPSPPRGCLHQTTL
Trigger: CAGGGTAGTTTGATGGAGGCAACCTCTGGGTGGGGAAGGGAGCAATGTCTCAGGATCTAGTGTGTCTAGGTTCTGAAGAATGATAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR GCA 72 bp CTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCATGAGACAAGAGCACCA +
Preference number: 3 (lower is better)
Translates to: LGRQAPEARAPG*TLGCGHETRAP
Trigger: TGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
3UTR CCA 72 bp CGCCCCTGCCCTTTCTGTCTCAGCCATCAGGTTACCTaGCCAGGGCCTCAGTCTGCTGGGCCGCTTGAGGGG +
Preference number: 3 (lower is better)
Translates to: RPCPFCLSHQVT*PGPQSAGPLEG
Trigger: CCCCTCAAGCGGCCCAGCAGACTGAGGCCCTGGCCAGGTAACCTGATGGCTGAGACAGAAAGGGCAGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR GCA 72 bp AGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTaGGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGC +
Preference number: 3 (lower is better)
Translates to: RGSARQPPSLHA*AGASSGKPSGG
Trigger: GCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR TCA 72 bp ACATGTAAGGGGCCAGCCCTAAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGCAGGACCCTCGGAGGC +
Preference number: 3 (lower is better)
Translates to: TCKGPALRAAIR*DHEEGSRTLGG
Trigger: GCCTCCGAGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCTTAGGGCTGGCCCCTTACATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
3UTR CCA 72 bp AGTCTGCTGGGCCGCTTGAGGGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGCAGGTGGAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: SLLGRLRGPAEL*LHPDFCRWRSS
Trigger: AGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000496411.5
3UTR CCA 72 bp GCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTaGAGCAGACTGGGCCTGACTCCCAGTGCTACGGGC +
Preference number: 3 (lower is better)
Translates to: ANLCSVLIPGRG*SRLGLTPSATG
Trigger: GCCCGTAGCACTGGGAGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
3UTR GCA 72 bp CGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAAC +
Preference number: 3 (lower is better)
Translates to: RKAATVSACLRW*QFREAFWRQVN
Trigger: GTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR GCA 72 bp TCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: SQGKRKAATVSA*LRWCQFREAFW
Trigger: CCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 72 bp CGGCACAGCAAGAGGACTGGAGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTTAGGTGTGCAGGTGAC +
Preference number: 3 (lower is better)
Translates to: RHSKRTGECCRG*WCLPLFRCAGD
Trigger: GTCACCTGCACACCTAAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
3UTR CCA 72 bp AAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTA +
Preference number: 3 (lower is better)
Translates to: KRKAATVSACLR*CQFREAFWRQV
Trigger: TACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CAA 90 bp CCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: PSLHACAGASSGKPSGGRKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...CCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR TCA 72 bp AGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATACTGCAGACCTTTTGGA +
Preference number: 3 (lower is better)
Translates to: SPGTRLHSRLWA*DKSTRYCRPFG
Trigger: TCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
3UTR GCA 72 bp GAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTT +
Preference number: 3 (lower is better)
Translates to: EFTGEAQGSHRL*MLALVPVQGSL
Trigger: AAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR GCA 72 bp GGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCA +
Preference number: 3 (lower is better)
Translates to: GGLQHCLASQSA*RRIHRGSARQP
Trigger: TGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CCA 72 bp GCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCATATCTCACACTGCAGG +
Preference number: 3 (lower is better)
Translates to: ACLRWCQFREAF*RQVNPHISHCR
Trigger: CCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CAA 90 bp GCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: ACLRWCQFREAFWRQVNPKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...CGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CAA 90 bp GCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: ARQPPSLHACAGASSGKPKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...AGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CAA 90 bp GGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 3 (lower is better)
Translates to: GLQHCLASQSACRRIHRGGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
3UTR TCA 72 bp CACCCCACCCTTCCCAAACTTACTCAGGGCTCCCTTTaGAAGGAGGGTGTTTCTGGGTCACCCTGTGGTCCC +
Preference number: 3 (lower is better)
Translates to: HPTLPKLTQGSL*KEGVSGSPCGP
Trigger: GGGACCACAGGGTGACCCAGAAACACCCTCCTTTCAAAGGGAGCCCTGAGTAAGTTTGGGAAGGGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR GCA 72 bp GATCCTGAGACATTGCTCCCTTCCCCACCCAGAGGTTaGCTCCATCAAACTACCCTGTGCTCCCCAACTCAC +
Preference number: 3 (lower is better)
Translates to: DPETLLPSPPRG*LHQTTLCSPTH
Trigger: GTGAGTTGGGGAGCACAGGGTAGTTTGATGGAGGCAACCTCTGGGTGGGGAAGGGAGCAATGTCTCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR CCA 72 bp AGTCAGGCTGAACTGGGAAGTCTCCTCCTCTTACCCTaGAGAGCCATACCCAGGGAGCCCTGTTCCCTCAAA +
Preference number: 3 (lower is better)
Translates to: SQAELGSLLLLP*RAIPREPCSLK
Trigger: TTTGAGGGAACAGGGCTCCCTGGGTATGGCTCTCCAGGGTAAGAGGAGGAGACTTCCCAGTTCAGCCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR CAA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGTCAGAGTGCACCGTATaGGAGGTCAGGAGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKSECTV*EVRRLR
Trigger: CCTGAGCCTCCTGACCTCCAATACGGTGCACTCTGA...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
3UTR CCA 72 bp TGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGG +
Preference number: 3 (lower is better)
Translates to: WVTFATVGCNTV*LLKALAAEFTG
Trigger: CCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CAA 90 bp ACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: TLSGFSKRLPQNSQGKRKLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...CTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR GCA 72 bp TTTGGCAGCTTTCCTAATTCTCTTGGGGCCAATTTGTaGAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: FGSFPNSLGANL*SVLIPGRGWSR
Trigger: TCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGCTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR CCA 72 bp GGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACCTGCACAGAGGACACA +
Preference number: 3 (lower is better)
Translates to: GMRQEHQILQTF*RQRLRTCTEDT
Trigger: TGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
3UTR-3UTR CAA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR-3UTR CAA 90 bp CTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTGGGCATTCCCCACCCAGAGGTaGCCTCCATCAAACTACCCT +
Preference number: 3 (lower is better)
Translates to: LLQVFLKVERLPTGWLWAFPTQR*PPSNYP
Trigger: AGGGTAGTTTGATGGAGGCAACCTCTGGGTGGGGAA...TGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR-3UTR CAA 90 bp GGTTGGAGAAGATCCTTCCACAGCCAGGGAAGTCACAAGGCATCAGCTCTCTTTTTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 3 (lower is better)
Translates to: GWRRSFHSQGSHKASALFFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...AAAGAGAGCTGATGCCTTGTGACTTCCCTGGCTGTGGAAGGATCTTCTCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR CCA 72 bp CAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTaGCTCTGGGCAGGAGAAAGACTTCTGGTGGATGTG +
Preference number: 3 (lower is better)
Translates to: QVFLKVERLPTG*LWAGERLLVDV
Trigger: CACATCCACCAGAAGTCTTTCTCCTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
3UTR CCA 72 bp GCTGGTACTTTTTGTGGTGATTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGCCAGGGAAGTCACAAG +
Preference number: 3 (lower is better)
Translates to: AGTFCGDSNTAG*RRSFHSQGSHK
Trigger: CTTGTGACTTCCCTGGCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAATCACCACAAAAAGTACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCAACGTCTTCAGCGCCCTaGCGATCTCGGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: WPPGPRSPGTRLHSRLWATSSAP*RSRGSG
Trigger: CCCCGACCCCCGAGATCGGCAGGGCGCTGAAGACGT...TGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000483223.5
CDS-3UTR GCA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGGGGGAGGAAGCCATGTaGACCAGAGGCTGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: AARPPKPGHQAALSAVGMGEEAM*TRGCAP
Trigger: GGGCGCACAGCCTCTGGTGCACATGGCTTCCTCCCC...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496411.5
CDS-3UTR GCA 90 bp CCCCCATCTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PPSWPPGPRSPGTRLHSRRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...CCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAGATGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR GCA 90 bp CCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACAGAGGACACAGCCTGGCCCGGGCACCAGGCTaGACTCTCGGCTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: PRSPGTRLHSRLHRGHSLARAPG*TLGCTE
Trigger: CTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGC...CAGGCTGTGTCCTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR CCA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AARPPKPGHQAALSAVGMGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CCA 90 bp CCCCCATCTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PPSWPPGPRSPGTRLHSRGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...CCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAGATGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR TCA 90 bp TGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: WPPGPRSPGTRLHSRLWAYSLRP*GGEQDP
Trigger: AGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATA...TGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR TCA 90 bp CCCCCATCTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGTATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: PPSWPPGPRSPGTRLHSRYSLRP*GGEQDP
Trigger: AGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATA...CCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAGATGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR GCA 90 bp CCACCCTCAGCCCTGGGCACTCACACATGTAAGGGGCCAGCCCTAAGGGCCGCTGTGCACCAGAGGCTGTaGGCCCCCACGCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PPSALGTHTCKGPALRAAVHQRL*APTRPH
Trigger: GTGAGGGCGCGTGGGGGCGCACAGCCTCTGGTGCAC...AGCGGCCCTTAGGGCTGGCCCCTTACATGTGTGAGTGCCCAGGGCTGAGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530986.5
CDS-3UTR GCA 90 bp CCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCAGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: PEARAPGCTLGCGHETRAASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...TGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp CCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PKPGHQAALSAVGMRQEHGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...GTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp CCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACAGAGGACACAGCCTGTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PRSPGTRLHSRLHRGHSLLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...CAGGCTGTGTCCTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR GCA 90 bp CCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PPKPGHQAALSAVGMRQEARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...CTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp CCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGGGGGAGGAAGCCATGTaGACCAGAGGCTCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: PPKPGHQAALSAVGMRQEGEEAM*TRGSRA
Trigger: CGCGCGCGAGCCTCTGGTGCACATGGCTTCCTCCCC...CTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528141.5
CDS-3UTR GCA 90 bp CCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGGTGCACCAGAGGCTGTaGGCCCCCACGCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PSLHACAGASSGKPSGGRVHQRL*APTRPH
Trigger: GTGAGGGCGCGTGGGGGCGCACAGCCTCTGGTGCAC...CCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR GCA 90 bp CCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PPKPGHQAALSAVGMRQELASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...CTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp CCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PKPGHQAALSAVGMRQEHARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...GTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCAGGCCCGGAGCTGCTaGAAGACAGGGGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTQARSC*KTGAHL
Trigger: GAGGTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTG...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496411.5
ENST00000530986.5
CDS-3UTR TCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
CDS-3UTR TCA 90 bp CGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGGCCGTCCTGGTAAAGTaGGAAACCGGTCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: RQAPEARAPGCTLGCGHEAVLVK*ETGPTG
Trigger: TCCTGTTGGACCGGTTTCTCACTTTACCAGGACGGC...CTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528141.5
CDS-3UTR GCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTGGGGAGGAAGCCATGTaGACCAGAGGCTGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTGEEAM*TRGCAP
Trigger: GGGCGCACAGCCTCTGGTGCACATGGCTTCCTCCCC...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496411.5
ENST00000530986.5
CDS-3UTR GCA 90 bp CCACCCTCAGCCCTGGGCACTCACACATGTAAGGGGCCAGCCCTAAGGGCCGCTTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PPSALGTHTCKGPALRAALASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...AGCGGCCCTTAGGGCTGGCCCCTTACATGTGTGAGTGCCCAGGGCTGAGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS-3UTR GCA 90 bp CCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACAGAGGACACAGCCTAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PPKPGHQAALSAAQRTQPRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...AGGCTGTGTCCTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR GCA 90 bp TTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGCCTGACTCCCGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LCSVLIPGRGWSRLGLTPARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...GGGAGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FTGEAQGSHRLCMLALVPAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AARPPKPGHQAALSAVGMCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp ATCTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCATGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ILAARPPKPGHQAALSAAWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...TGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR TCA 90 bp GGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GEAQGSHRLCMLALVPVQVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...CTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALRAAIR*DHEEGS
Trigger: GCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCT...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp AGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: SACRRIHRGSARQPPSLHASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...ATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALLRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHLRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR GCA 90 bp CGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACAGAGGACACAGCCTGAAGTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSPGTRLHSRLHRGHSLKLRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...CTTCAGGCTGTGTCCTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR GCA 90 bp CGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGCTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQAPEARAPGCTLGCGHELKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...CTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CCA 90 bp CCCCCATCTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: PPSWPPGPRSPGTRLHSRILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...CCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAGATGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp AAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KPGHQAALSAVGMRQEHQGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...CTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp TGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CMLALVPVQGSLLAAGKPAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...GGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp ATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCAGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: MLALVPVQGSLLAAGKPAAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...TGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
3UTR CAA 72 bp CAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QGKRKAATVSAC*RWCQFREAFWR
Trigger: CCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGCCTGACTCCCAGGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: VQCPHPRPGLEQTGPDSQEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...CTGGGAGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR TCA 90 bp CCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCACTGGGTGACTCTTaGGGGGCTAGAAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PEARAPGCTLGCGHETRAPLGDS*GARSRA
Trigger: AGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTGG...TGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp TGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCACAGTTTCCTCATCAGTaGACTGGGGCAAGACTAAAC +
Preference number: 4 (lower is better)
Translates to: WPPGPRSPGTRLHSRLWAQFPHQ*TGARLN
Trigger: GTTTAGTCTTGCCCCAGTTCACTGATGAGGAAACTG...TGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000483223.5
CDS-3UTR TCA 90 bp CCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACAGAGGACACAGCCTACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPKPGHQAALSAAQRTQPTEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...AGGCTGTGTCCTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR GCA 90 bp CCACCCTCAGCCCTGGGCACTCACACATGTAAGGGGCCAGCCCTAAGGGCCGCTAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PPSALGTHTCKGPALRAARNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...AGCGGCCCTTAGGGCTGGCCCCTTACATGTGTGAGTGCCCAGGGCTGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS-3UTR GCA 90 bp AGACTGGGCCTGACTCCCAGTGCTACGGGCAGCAAAGAGGGAGCAGAGGGCCTCGGGCCTGACTCCCAGTaGTACGGGCAGCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RLGLTPSATGSKEGAEGLGPDSQ*YGQQRG
Trigger: CCCTCTTTGCTGCCCGTAGCACTGGGAGTCAGGCCC...GAGGCCCTCTGCTCCCTCTTTGCTGCCCGTAGCACTGGGAGTCAGGCCCAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
CDS-3UTR GCA 90 bp ATCTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILAARPPKPGHQAALSAALKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...TGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR CCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR CCA 90 bp CCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PKPGHQAALSAVGMRQEHGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...GTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR CCA 90 bp CGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RLPQNSQGKRKAATVSACGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...GCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LGRQAPEARAPGCTLGCGSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...CCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHYSLRP*GGEQDP
Trigger: AGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATA...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR TCA 90 bp AGGGAGGCTGGCTTGGGTGCCTCTGAAGGTGTAGGGCTCAAAGAGGGTCCCCAGAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: REAGLGASEGVGLKEGPQRAAIR*DHEEGS
Trigger: GCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCT...CTGGGGACCCTCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCAGCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR GCA 90 bp CAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGTTTGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGSLLAAGKPAYLTLQGFGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...AAACCCCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp CCTAATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PNSLGANLCSVLIPGRGWGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...CCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp GCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGTGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASEHQLLRVVCGREAGLGGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...ACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp ACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACAGCCTGGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TADLLEAKAQDLHRGHSLGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...CAGGCTGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp CAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QFREAFWRQVNPHISHCRGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...CCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp CGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGATACTTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RAPGCTLGCGHETRAPDTLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...AGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp TGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGTGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: WGQFVQCPHPRPGLEQTGWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...CCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGCCTGACTCCCCCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LCSVLIPGRGWSRLGLTPPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...GGGAGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GCTGGTGGTGTCTCCCCCTCTTTAGGTGTGCAGGTGACAGGGGAAGGCAGTAGTCAGGCCCGGAGCTGCTaGAAGACAGGGGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: AGGVSPSLGVQVTGEGSSQARSC*KTGAHL
Trigger: GAGGTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTG...ACTACTGCCTTCCCCTGTCACCTGCACACCTAAAGAGGGGGAGACACCACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000496411.5
CDS-3UTR CCA 90 bp TTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: FTGEAQGSHRLCMLALVPRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGCCTGACTCCCGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: LCSVLIPGRGWSRLGLTPGPAEL*LHPDFC
Trigger: GCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACC...GGGAGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGCCTGACTCCCGTGAGTGTCGTCGGGTaGGAGGCAGGCAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: LCSVLIPGRGWSRLGLTPVSVVG*EAGRQK
Trigger: CTTCTGTCTGCCTGCCTCCCACCCGACGACACTCAC...GGGAGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp CCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PKPGHQAALSAVGMRQEHWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...GTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGTGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: AARPPKPGHQAALSAVGMWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALTEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR TCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACGCCGTCCTGGTAAAGTaGGAAACCGGTCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHAVLVK*ETGPTG
Trigger: TCCTGTTGGACCGGTTTCTCACTTTACCAGGACGGC...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS-3UTR GCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: PDTADLLEAKAQDLHRGHASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...GTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RLCMLALVPVQGSLLAAGATVSA*LRWCQF
Trigger: GAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGC...ACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCAGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: MLALVPVQGSLLAAGKPAGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...TGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AGGGAGGCTGGCTTGGGTGCCTCTGAAGGTGTAGGGCTCAAAGAGGGTCCCCAGCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: REAGLGASEGVGLKEGPQPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...CTGGGGACCCTCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCAGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR CCA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: EKRQVRTQVASHPQPWALSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000533647.1
CDS-3UTR CCA 90 bp GCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ACLRWCQFREAFWRQVNPECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...CGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: AARPPKPGHQAALSAVGMEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTACCTCTTCCTCTCCTaGAGGTGGGAAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHYLFLS*RWEGLW
Trigger: CCAGAGACCTTCCCACCTCCAGGAGAGGAAGAGGTA...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496411.5
CDS-3UTR TCA 90 bp CCTAATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCCCAGCCGCTCCTTaGGGAGGCACCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNSLGANLCSVLIPGRGWSPAAP*GGTTAP
Trigger: TGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCT...CCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR TCA 90 bp GGTGTCTCCCCCTCTTTAGGTGTGCAGGTGACAGGGGAAGGCAGTAGTCTGGGGGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: GVSPSLGVQVTGEGSSLGEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...CCCCAGACTACTGCCTTCCCCTGTCACCTGCACACCTAAAGAGGGGGAGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR GCA 90 bp AGGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTTTAAGAAGAAACGGTaGCTCTCGGCGTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRRGRSGLRWPATLSPGHFKKKR*LSASAA
Trigger: AGCAGCCGACGCCGAGAGGCACCGTTTCTTCTTAAA...GTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS-3UTR GCA 90 bp CCACCCTCAGCCCTGGGCACTCACACATGTAAGGGGCCAGCCCTAAGGGCCGCTTTTAAGAAGAAACGGTaGCTCTCGGCGTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPSALGTHTCKGPALRAAFKKKR*LSASAA
Trigger: AGCAGCCGACGCCGAGAGGCACCGTTTCTTCTTAAA...AGCGGCCCTTAGGGCTGGCCCCTTACATGTGTGAGTGCCCAGGGCTGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS-3UTR GCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGTGCACCAGAGGCTGTaGGCCCCCACGCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQVHQRL*APTRPH
Trigger: GTGAGGGCGCGTGGGGGCGCACAGCCTCTGGTGCAC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306601.9
ENST00000412341.6
CDS-3UTR GCA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGTGCACCAGAGGCTGTaGGCCCCCACGCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GHETRAPDTADLLEAKAQVHQRL*APTRPH
Trigger: GTGAGGGCGCGTGGGGGCGCACAGCCTCTGGTGCAC...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496411.5
CDS-3UTR GCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGAGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GAGTCCTCTCATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: ESSHHAQIPNLQAPAHSWASPAA*RTRPPP
Trigger: CGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGC...CCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGATGAGAGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GHETRAPDTADLLEAKAQGCGTC*GARPAA
Trigger: GGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCC...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHETRAPDTADLLEAKAQGGCGT*CGARPA
Trigger: AGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCC...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp TGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CQFREAFWRQVNPHISHCLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...GCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp GTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VASEHQLLRVVCGREAGLLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...CAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp CGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGATACTAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RAPGCTLGCGHETRAPDTRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...AGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp AGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGCTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SHRLCMLALVPVQGSLLALHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...CGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCATCCCGGGTGTCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EARAPGCTLGCGHETRAPSRVSL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGACACCCGGGA...TGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp TGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: WGQFVQCPHPRPGLEQTGACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...CCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GAGCCCGTCTGGACCTCCCTTACCACTGTGCAGCTTCATGTGCTCCTTCAGGTGGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EPVWTSLTTVQLHVLLQVGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...CACCTGAAGGAGCACATGAAGCTGCACAGTGGTAAGGGAGGTCCAGACGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR GCA 90 bp TTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: FTGEAQGSHRLCMLALVPGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: ILLGPICAVSSSQAGVGAAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...TGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp AGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGTCCCGGGTGTCAGAGTaGACCGTATTGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SHRLCMLALVPVQGSLLASRVSE*TVLEVR
Trigger: CCTGACCTCCAATACGGTGCACTCTGACACCCGGGA...CGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCACGTCTTCAGCGCCCTaGCGATCTCGGGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLTSSAP*RSRGSG
Trigger: CCCCGACCCCCGAGATCGGCAGGGCGCTGAAGACGT...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTLKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR CCA 90 bp GGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGATACTGGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: GHQAALSAVGMRQEHQILAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...CAGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp GGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGTGCCTCTGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTPTSPSSMWKGGWLGCLWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...GAGGCACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp AGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: RIHRGSARQPPSLHACAGRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...ACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGCCTGGACCCCTCGCTaGATCCCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSAWTPR*IPEAQG
Trigger: CCCCTGGGCCTCTGGGATCCAGCGAGGGGTCCAGGC...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GCTGGTGGTGTCTCCCCCTCTTTAGGTGTGCAGGTGACAGGGGAAGGCAGTAGTGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: AGGVSPSLGVQVTGEGSSEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...ACTACTGCCTTCCCCTGTCACCTGCACACCTAAAGAGGGGGAGACACCACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR CCA 90 bp CCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACTGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: PKPGHQAALSAVGMRQEHWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...GTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCGTGGCGGTGAGGCCGTaGTCAGAGGTCTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLVAVRP*SEVWRA
Trigger: CGCCCTCCAGACCTCTGACCACGGCCTCACCGCCAC...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451251.5
CDS-3UTR CCA 90 bp GGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGACTGAAGTGGAGCTGTaGGGAAGGGGCGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: GEAQGSHRLCMLALVPVQTEVEL*GRGERL
Trigger: AAGTCTCTCGCCCCTTCCCCACAGCTCCACTTCAGT...CTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp AATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCTCCAGTCCACTGAAGTaGAGCTGTGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: NSQGKRKAATVSACLRWCSSPLK*SCGEGA
Trigger: CGCCCCTTCCCCACAGCTCCACTTCAGTGGACTGGA...GCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp AAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGAAAGGAGGGTGTTTCTaGGTCACCCTGTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KPGHQAALSAVGMRQEHQKGGCF*VTLWSL
Trigger: GAGGGACCACAGGGTGACCCAGAAACACCCTCCTTT...CTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR CAA 72 bp CGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RWAATLSGFSKR*PQNSQGKRKAA
Trigger: GGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGCCCAGCCGCTCCTTaGGGAGGCACCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPSPAAP*GGTTAP
Trigger: TGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCT...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp AGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SHRLCMLALVPVQGSLLAWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...CGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR TCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp GTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VASEHQLLRVVCGREAGLRAAIR*DHEEGS
Trigger: GCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCT...CAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp GCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ACLRWCQFREAFWRQVNPTEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...CGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGAGCAGGCCCGGAGCTaGTGGAAGACAGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKEQARS*WKTGAH
Trigger: GTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTGCTC...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306601.9
ENST00000412341.6
CDS-3UTR GCA 90 bp TTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAGGGGAGGAAGCCATGTaGACCAGAGGCTGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: FCYGGLQHCLASQSACRRGEEAM*TRGCAP
Trigger: GGGCGCACAGCCTCTGGTGCACATGGCTTCCTCCCC...TCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR GCA 90 bp TCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTATTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SASSCPLVASEHQLLRVVLRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...TACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QTLSLLLLFSPWSLASQSLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...GCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PDTADLLEAKAQDLHRGHLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...GTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGCCCGGGCACCAGGCTaGACTCTCGGCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQARAPG*TLGCGH
Trigger: ATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: PEARAPGCTLGCGHETRALRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...TGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGGGCCTGACTCCCAGTaGTGGCCAGGGCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKGPDSQ*WPGPQS
Trigger: AGACTGAGGCCCTGGCCAGCACTGGGAGTCAGGCCC...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCGGGCCTGACTCCCAGTaGTGGCCAGGGCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASGPDSQ*WPGPQS
Trigger: AGACTGAGGCCCTGGCCAGCACTGGGAGTCAGGCCC...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGGGGCCTGACTCCCAGTaGTGGCCAGGGCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: AATLSGFSKRLPQNSQGKGPDSQ*WPGPQS
Trigger: AGACTGAGGCCCTGGCCAGCACTGGGAGTCAGGCCC...CTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp GTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: VQGSLLAAGKPAYLTLQGATVSA*LRWCQF
Trigger: GAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGC...CCCCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: ILLGPICAVSSSQAGVGAGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...TGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: LRFQICKLLPTRGLGTPTAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...AGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp GTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VDDKVAASAERPGAELTDAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...ATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGGGAGGAAGCCATGTaGACCAGAGGCTCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKGEEAM*TRGSRA
Trigger: CGCGCGCGAGCCTCTGGTGCACATGGCTTCCTCCCC...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366471.7
CDS-3UTR CCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAACAGGCCCGGAGCTGCTaGAAGACAGGGGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKQARSC*KTGAHL
Trigger: GAGGTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTG...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306601.9
ENST00000412341.6
CDS-3UTR CCA 90 bp ACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTGACAAGCAGGCCCGGAGCTGCTaGAAGACAGGGGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: TLTSAGGGALELNEDADKQARSC*KTGAHL
Trigger: GAGGTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTG...CTTGTCAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000496411.5
CDS-3UTR CCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACACCACTGCTCCATGTaGCCGCCCAGGCGGATGCGG +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRHHCSM*PPRRMR
Trigger: CCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTG...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: GEEAGQDSGGQPPSALGTILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...AGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CCA 90 bp CTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LVASEHQLLRVVCGREAGPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...GCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCTGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTGCTCCCTTCCCCACCCAGAGGTTGCCTCCATCAAACTACCCTGTGCTCCCCAGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLPSPPRGCLHQTTLCSPECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...TGGGGAGCACAGGGTAGTTTGATGGAGGCAACCTCTGGGTGGGGAAGGGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp GGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGTPTSPSSMWKGGWLGAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp TGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: WLLKALAAEFTGEAQGSHGPAEL*LHPDFC
Trigger: GCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACC...GTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACCTGACTCCCAGTGCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVPVQGSLLAAGKPAYLTPDSQC*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGCACTGGGAGTCAGG...TGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp GCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: ACLRWCQFREAFWRQVNPFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...CGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCCTCTTTAGGTGTGCAGGTGACAGGGGAAGGCAGTAGTCTGGGGGCATCAGGCTCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSLGVQVTGEGSSLGASGSACLR*CQFREA
Trigger: GGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA...GCCTGATGCCCCCAGACTACTGCCTTCCCCTGTCACCTGCACACCTAAAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR CCA 90 bp GGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCCAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLGDFCYGGLQHCLASQSQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...GCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGACAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLQHCLASQSACRRIHRGQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GAAGCAGGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: EAGLGDFCYGGLQHCLASEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...AGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGATACTGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: RAPGCTLGCGHETRAPDTGKAVV*GHQAHY
Trigger: GTAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...AGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496411.5
3UTR CAA 72 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGACCTGGAGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GHETRAPDTADL*EAKAQDLEGWG
Trigger: CCCCCACCCCTCCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGAAGCCCAGCCGCTCCTTaGGGAGGCACCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRSPAAP*GGTTAP
Trigger: TGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCT...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp GCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCCCGGGTGTCTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: AASAERPGAELTDVVPGVSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...GACACCCGGGACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: SKSASSCPLVASEHQLLREGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...TCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR TCA 90 bp CCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSPCCSFSVPGVWLPKAKVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...TTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR TCA 90 bp CTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LAAEFTGEAQGSHRLCMLRRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...AAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTTGGGTCGAGTGGCGGTaGGGCCGTGGTCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSWVEWR*GRGQRS
Trigger: AGACCTCTGACCACGGCCTCACCGCCACTCGACCCA...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451251.5
CDS-3UTR TCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGCACCAGAGGCATGTaGGTGTCGTCGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPCTRGM*VSSGGR
Trigger: CCTCCCACCCGACGACACTCACATGCCTCTGGTGCA...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451251.5
CDS-3UTR TCA 90 bp CTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LRFQICKLLPTRGLGTPTRAAIR*DHEEGS
Trigger: GCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCT...AGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp GGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGATACTGACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHQAALSAVGMRQEHQILTEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...CAGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp TGTTATCCAAATCATGGAGCCCGTCTGGACCTCCCTTACCACTGTGCAGCTTCAGAGCAGGCCCGGAGCTaGTGGAAGACAGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: CYPNHGARLDLPYHCAASEQARS*WKTGAH
Trigger: GTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTGCTC...TGAAGCTGCACAGTGGTAAGGGAGGTCCAGACGGGCTCCATGATTTGGATAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR GCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAATTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQLASCE*REKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAA...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VASEHQLLRVVCGREAGLRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...CAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGGGCCTGACTCCCAGTaGTGGCCAGGGCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSGPDSQ*WPGPQS
Trigger: AGACTGAGGCCCTGGCCAGCACTGGGAGTCAGGCCC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp AATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGCCTGACTGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NLCSVLIPGRGWSRLGLTACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...AGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QTLSLLLLFSPWSLASQSGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...GCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCTGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: QTLSLLLLFSPWSLASQSWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...GCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCATGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACATCCCAGGACGCCCCTaGCCTTTCTGTCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: WLLKALAAEFTGEAQGSHIPGRP*PFCLSH
Trigger: ATGGCTGAGACAGAAAGGGCAGGGGCGTCCTGGGAT...GTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
CDS-3UTR GCA 90 bp CAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCGGGCCTGACTCCCAGTaGTACGGGCAGCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QTLSLLLLFSPWSLASQSGPDSQ*YGQQRG
Trigger: CCCTCTTTGCTGCCCGTAGCACTGGGAGTCAGGCCC...GCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
CDS-3UTR GCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGGTCGTGTCCTGGCGTaGAGCTGGGGGCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRGRVLA*SWGRSS
Trigger: TGAAGAGCGCCCCCAGCTGCACGCCAGGACACGACC...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451251.5
CDS-3UTR CCA 90 bp TTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: FQICKLLPTRGLGTPTSPPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...CGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp GAAGCAGGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: EAGLGDFCYGGLQHCLASAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...AGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTAGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: SASSCPLVASEHQLLRVVAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...TACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGTGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTGACAAGTGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLTSAGGGALELNEDADKWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...CTTGTCAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp ATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPNLQAPAHSWPRNTNFSRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...GGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp TCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCPLVASEHQLLRVVCGRAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...CCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp GGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGTGCCTCGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GTPTSPSSMWKGGWLGCLGPAEL*LHPDFC
Trigger: GCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACC...GAGGCACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCCCTGACTCCCAGTGCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSPDSQC*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGCACTGGGAGTCAGG...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: CMLALVPVQGSLLAAGKPFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...GGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACTCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WLLKALAAEFTGEAQGSHSACLR*CQFREA
Trigger: GGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA...GTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCCAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LGDFCYGGLQHCLASQSAEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...AGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATATCATGGAGCCCGTCTaGACCTCCCTTACCACTGTG +
Preference number: 4 (lower is better)
Translates to: SACRRIHRGSARQPPSLHIMEPV*TSLTTV
Trigger: CACAGTGGTAAGGGAGGTCCAGACGGGCTCCATGAT...ATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGAGCCCAGCCGCTCCTTaGGGAGGCACCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWSPAAP*GGTTAP
Trigger: TGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCT...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCAGCCCAGCCGCTCCTTaGGGAGGCACCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGSPAAP*GGTTAP
Trigger: TGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCT...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGCCCGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LSFRKTKVVQLPYSPVLPVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...GGGCAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
ENST00000476503.5
CDS-3UTR TCA 90 bp TGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CQFREAFWRQVNPHISHCRSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...GCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCCCACTGGGTGACTCTTaGGGGGCTAGAAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLPLGDS*GARSRA
Trigger: AGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTGG...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAACGCCCTCCAGTCCACTaGAGTGGAGCTGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQRPPVH*SGAVGK
Trigger: CTTCCCCACAGCTCCACTTCAGTGGACTGGAGGGCG...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAACTCAGCGCTACCATGTaGGTGTCGTCGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TLHSVALVPGDQASGISQLSATM*VSSGGR
Trigger: CCTCCCACCCGACGACACTCACATGGTAGCGCTGAG...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp GGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGTGCCTCTATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: GTPTSPSSMWKGGWLGCLYSLRP*GGEQDP
Trigger: AGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATA...GAGGCACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp GACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCAAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DKSTRYCRPFGGKGSGPARAAIR*DHEEGS
Trigger: GCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCT...TGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCGGGGAGGAAGCCATGTaGACCAGAGGCTGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGGEEAM*TRGCAP
Trigger: GGGCGCACAGCCTCTGGTGCACATGGCTTCCTCCCC...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306601.9
ENST00000412341.6
CDS-3UTR GCA 90 bp ATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACATTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IMLRFQICKLLPTRGLGTLRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...TGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGATTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGLRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLELRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp CAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QTLSLLLLFSPWSLASQSRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...GCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp AGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: RIHRGSARQPPSLHACAGKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...ACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTCTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: ARQPPSLHACAGASSGKPLRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...AGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTACTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SASSCPLVASEHQLLRVVLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...TACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR GCA 90 bp GAAGCAGGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EAGLGDFCYGGLQHCLASLLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...AGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTACTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SASSCPLVASEHQLLRVVLLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...TACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR GCA 90 bp GGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLGDFCYGGLQHCLASQSACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...GCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ATACGTCTGTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: IRLWMTRLLLVRKDRAQNATVSA*LRWCQF
Trigger: GAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGC...GTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGGCAGCCACCGTCTCTaGATGCTTGCGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSGSHRL*MLALVP
Trigger: TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCC...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: MLALVPVQGSLLAAGKPAFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...TGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTGACAAGTGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: TLTSAGGGALELNEDADKWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...CTTGTCAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGTGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTGGGCAGCCCGGGCACCAGGCTaGACTCTCGGCTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LLQVFLKVERLPTGWLWAARAPG*TLGCTE
Trigger: CTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGC...TGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR CCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GGTTGGAGAAGATCCTTCCACAGCCAGGGAAGTCACAAGGCATCAGCTCTCTTTGGGGTCCCACCCTCCTaGGCAACCTGGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GWRRSFHSQGSHKASALFGVPPS*ATWPLE
Trigger: CTCAAGAGGCCAGGTTGCCCAGGAGGGTGGGACCCC...AAAGAGAGCTGATGCCTTGTGACTTCCCTGGCTGTGGAAGGATCTTCTCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGTGGGAAGGTCTCTGGTaGGGGTCCCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWWEGLW*GSHPPG
Trigger: CCCAGGAGGGTGGGACCCCCACCAGAGACCTTCCCA...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp AGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAT +
Preference number: 4 (lower is better)
Translates to: RIHRGSARQPPSLHACAGGKAVV*GHQAHY
Trigger: ATAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...ACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGDFCYGGLQHCLASQSAGPAEL*LHPDFC
Trigger: GCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACC...AGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCCTGACTCCCAGTGCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKPDSQC*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGCACTGGGAGTCAGG...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGATCCCAGGCCGGGGTTaGAGCAGACTGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWIPGRG*SRLGLT
Trigger: AGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGAT...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAATCCCAGGCCGGGGTTaGAGCAGACTGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKIPGRG*SRLGLT
Trigger: AGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGAT...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAATCCCAGGCCGGGGTTaGAGCAGACTGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQIPGRG*SRLGLT
Trigger: AGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGAT...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGATCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLQHCLASQSACRRIHRGSACLR*CQFREA
Trigger: GGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA...TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GAGCCCGTCTGGACCTCCCTTACCACTGTGCAGCTTCATGTGCTCCTTCAGGTGGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: EPVWTSLTTVQLHVLLQVGCNTV*LLKALA
Trigger: GGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCC...CACCTGAAGGAGCACATGAAGCTGCACAGTGGTAAGGGAGGTCCAGACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR CCA 90 bp TTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: FQICKLLPTRGLGTPTSPALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...CGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR CCA 90 bp CAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: QFREAFWRQVNPHISHCRALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...CCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGACAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: PSPCCSFSVPGVWLPKAKEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...TTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGCCGGTTGGAGAAGATCCTTCCACAGCCAGGGAAGTCACAAGGCATCAGCTCGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: LPVGEDPSTAREVTRHQLGKAVV*GHQAHY
Trigger: GTAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...GAGCTGATGCCTTGTGACTTCCCTGGCTGTGGAAGGATCTTCTCCAACCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
CDS-3UTR CCA 90 bp GTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGTACCTCTTCCTCTCCTaGAGGTGGGAAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VQGSLLAAGKPAYLTLQGYLFLS*RWEGLW
Trigger: CCAGAGACCTTCCCACCTCCAGGAGAGGAAGAGGTA...CCCCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
CDS-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTGGAAAGGTCGTGTCCTaGCGTGCAGCTGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLAGKVVS*RAAGGA
Trigger: AGCGCCCCCAGCTGCACGCCAGGACACGACCTTTCC...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451251.5
CDS-3UTR CCA 90 bp CCTAATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGACGGGAAATTTCAACTaGGCTGGGGGCGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: PNSLGANLCSVLIPGRGWTGNFN*AGGGPH
Trigger: GTGTGGACCGCCCCCAGCCCAGTTGAAATTTCCCGT...CCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp GGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGATGTGCACCAGAGGCTaGAGGGTGGAAGGGACGTCT +
Preference number: 4 (lower is better)
Translates to: GGLQHCLASQSACRRIHRMCTRG*RVEGTS
Trigger: AGACGTCCCTTCCACCCTCCAGCCTCTGGTGCACAT...CCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp ACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACAGCCTGTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: TADLLEAKAQDLHRGHSLSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...CAGGCTGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR TCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp GTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VASEHQLLRVVCGREAGLWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...CAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp TGTGGCTGCACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CGCTLTSAGGGALELNEDRSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...ATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR TCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPRSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGACCACTGGGTGACTCTTaGGGGGCTAGAAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGPLGDS*GARSRA
Trigger: AGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTGG...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCACTGGGTGACTCTTaGGGGGCTAGAAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFPLGDS*GARSRA
Trigger: AGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTGG...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAACCACTGGGTGACTCTTaGGGGGCTAGAAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQPLGDS*GARSRA
Trigger: AGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTGG...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTACCACTGGGTGACTCTTaGGGGGCTAGAAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: DDKVAASAERPGAELTDVPLGDS*GARSRA
Trigger: AGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTGG...TACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVRRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGLRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp TCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPCCSFSVPGVWLPKAKALRRHH*SMWPPR
Trigger: CCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAA...AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGAAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRRNLAS*ECREKP
Trigger: GGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp GGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GGLQHCLASQSACRRIHRKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...CCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: SCPLVASEHQLLRVVCGRKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...CCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp ATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCACTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: MLALVPVQGSLLAAGKPALRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...TGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCCTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACCTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PDTADLLEAKAQDLHRGHLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...GTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496411.5
CDS-3UTR GCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKLLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LRFQICKLLPTRGLGTPTACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...AGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TLHSVALVPGDQASGISQATVSA*LRWCQF
Trigger: GAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGC...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFATVSA*LRWCQF
Trigger: GAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGC...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGATVSA*LRWCQF
Trigger: GAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGC...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGGCCACCGTCTCTGCATaGTTGCGCTGGTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKATVSA*LRWCQF
Trigger: GAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGC...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp AGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCCCGGGTGTCAGAGTGTTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SAERPGAELTDVVPGVRVFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...CACTCTGACACCCGGGACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTGGGCAGGCCCAGGGGCAGAGATaGTGGGACAGGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SFRCFLKLKDFPQAGSGQAQGQR*WDRALG
Trigger: CCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTGGGC...CTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLAWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGTGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCCCGGGTGTCAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: AASAERPGAELTDVVPGVRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...GACACCCGGGACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGCCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAACCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGCCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GATACGTCTGTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAAATCCCAGGACGCCCCTaGCCTTTCTGTCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: DTSVDDKVAASAERPGAEIPGRP*PFCLSH
Trigger: ATGGCTGAGACAGAAAGGGCAGGGGCGTCCTGGGAT...TTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
CDS-3UTR CCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp GGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGATACTGATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: GHQAALSAVGMRQEHQILILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...CAGTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGLQHCLASQSACRRIHRSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...CCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCCCCTCCTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: IPNLQAPAHSWPRNTNFSPSWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGGAGGG...GGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp TGGCTCTGGGCAGGAGAAAGACTTCTGGTGGATGTGCTGGTACTTTTTGTGGTGAGGTGGGAAGGTCTCTaGTGGGGGTCCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: WLWAGERLLVDVLVLFVVRWEGL*WGSHPP
Trigger: AGGAGGGTGGGACCCCCACCAGAGACCTTCCCACCT...CACCACAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTCCTGCCCAGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGAGGCTCACTATCATCTaGGGAGGAGCTGTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VQGSLLAAGKPAYLTLQGRLTII*GGAVGP
Trigger: TGGACCTACAGCTCCTCCCCAGATGATAGTGAGCCT...CCCCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GHETRAPDTADLLEAKAQECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GHETRAPDTADLLEAKAQAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRGPAEL*LHPDFC
Trigger: GCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACC...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSGPAEL*LHPDFC
Trigger: GCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACC...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAGGTCCTGCTGAGCTGTaGCTGCACCCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQGPAEL*LHPDFC
Trigger: GCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACC...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: FTGEAQGSHRLCMLALVPVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...TGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCATCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPSACLR*CQFREA
Trigger: GGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GATACGTCTGTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAATCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DTSVDDKVAASAERPGAESACLR*CQFREA
Trigger: GGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA...TTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCCAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTGAGATGCAGAGGGCCTaGACCCCTCGCTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSEMQRA*TPRWIP
Trigger: TGGGATCCAGCGAGGGGTCCAGGCCCTCTGCATCTC...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SACLRWCQFREAFWRQVNCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...GTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLGKAVV*GHQAHY
Trigger: GTAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366471.7
ENST00000412341.6
ENST00000477070.6
CDS-3UTR CCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAATCCAGTCCACTGAAGTaGAGCTGTGGGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQSSPLK*SCGEGA
Trigger: CGCCCCTTCCCCACAGCTCCACTTCAGTGGACTGGA...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCGTGAGTGTCGTCGGGTaGGAGGCAGGCAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFVSVVG*EAGRQK
Trigger: CTTCTGTCTGCCTGCCTCCCACCCGACGACACTCAC...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCCTCCTCCTCTTACCCTaGAGAGCCATACCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVLLLLP*RAIPRE
Trigger: CTCCCTGGGTATGGCTCTCCAGGGTAAGAGGAGGAG...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
3UTR CAA 72 bp TCACCCCACCCTTCCCAAACTTACTCAGGGCTCCCTTaGAAAGGAGGGTGTTTCTGGGTCACCCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPHPSQTYSGLP*KGGCFWVTLWS
Trigger: GGACCACAGGGTGACCCAGAAACACCCTCCTTTCAAAGGGAGCCCTGAGTAAGTTTGGGAAGGGTGGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp CTTGAGTCCTCTCATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGGAAGGTATGGCCTGCTaGGCACTCCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: LESSHHAQIPNLQAPAHSEGMAC*ALPHKP
Trigger: GGGCTTGTGTGGGAGTGCTCAGCAGGCCATACCTTC...CGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGATGAGAGGACTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp CTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LGDFCYGGLQHCLASQSAWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...AGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGAAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRRSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQRSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLERRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSRRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFRRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWRRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGATATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRYSLRP*GGEQDP
Trigger: AGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATA...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp GAAGTCACAAGGCATCAGCTCTCTTTTGGCAGCTTTCCTAATTCTCTTGGGGCCAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EVTRHQLSFGSFPNSLGARAAIR*DHEEGS
Trigger: GCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCT...GGCCCCAAGAGAATTAGGAAAGCTGCCAAAAGAGAGCTGATGCCTTGTGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp CGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAGAGCACCAGATACTaGAGACCTTTTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLCMLALVPVQGSLLAAGKSTRY*RPFGGK
Trigger: TTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTT...ACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp ATACGTCTGTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: IRLWMTRLLLVRKDRAQNKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...GTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAACTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGCTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACTGCACCCTGACTTCTaGAGGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRLHPDF*RWRSSG
Trigger: TCCAGAGCTCCTCCACCTGCAGAAGTCAGGGTGCAG...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGCTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWLLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp ACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTGACAAGCTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TLTSAGGGALELNEDADKLLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...CTTGTCAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR GCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGCATGCTTGCGCTGGTaGCAGTTCAGGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPACLRW*QFREAF
Trigger: GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGTGCCTCGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GTPTSPSSMWKGGWLGCLASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...GAGGCACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp GTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: VASEHQLLRVVCGREAGLASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...CAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp CAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGTTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QFREAFWRQVNPHISHCRFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...CCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTATTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SASSCPLVASEHQLLRVVFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...TACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: TLHSVALVPGDQASGISQGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp AATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGCCTGACTAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NLCSVLIPGRGWSRLGLTRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...AGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTCCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLAPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTTGAGTCCTCTCATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGCCTACAGCCCAGTCTTaGCCCCACCCTGCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LESSHHAQIPNLQAPAHSPTAQS*PHPALC
Trigger: ACAGAGTGCAGGGTGGGGGCAAGACTGGGCTGTAGG...CGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGATGAGAGGACTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGTCCCGGGTGTCAGAGTaGACCGTATTGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLESRVSE*TVLEVR
Trigger: CCTGACCTCCAATACGGTGCACTCTGACACCCGGGA...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCGTCAGAACAAAGGCCTaGGCCCTCCAGTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLVRTKA*ALQSTE
Trigger: TTCAGTGGACTGGAGGGCGCAGGCCTTTGTTCTGAC...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp TCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGACTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SKSASSCPLVASEHQLLRLKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...TCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLAGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: EHQILQTFWRQRLRTCTESPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...CTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAACCCTCCTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: TLHSVALVPGDQASGISQPSWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGGAGGG...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAT +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEEGKAVV*GHQAHY
Trigger: ATAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLAAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGATCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGSACLR*CQFREA
Trigger: GGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGATCTGCATGCTTGCGCTaGTGCCAGTTCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGSACLR*CQFREA
Trigger: GGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLGCNTV*LLKALA
Trigger: GGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCC...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LQHCLASQSACRRIHRGSGCNTV*LLKALA
Trigger: GGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCC...GCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp ATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACAGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: IMLRFQICKLLPTRGLGTALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...TGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR CCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TTGGCAGCTTTCCTAATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGCAGGGGCAGAGATGCTaGGACAGGGCTCTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LAAFLILLGPICAVSSSQQGQRC*DRALGD
Trigger: GTCCCCTAGAGCCCTGTCCCAGCATCTCTGCCCCTG...CTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGCTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCATGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: ILLGPICAVSSSQAGVGAWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...TGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GLGDFCYGGLQHCLASQSCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...GCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWGKAVV*GHQAHY
Trigger: GTAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366471.7
ENST00000412341.6
ENST00000477070.6
CDS-3UTR CCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGAGCCATCAGGTTACCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKSHQVT*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGGTAACCTGATGGCT...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000477070.6
CDS-3UTR CCA 90 bp ATACGTCTGTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACCAGAGTGCACCGTATTaGAGGTCAGGAGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: IRLWMTRLLLVRKDRAQNQSAPY*RSGGSG
Trigger: ACCTGAGCCTCCTGACCTCCAATACGGTGCACTCTG...GTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCCATCCACCCCGTCTTaGGCACCCCCACTTAATGCT +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSPSTPS*APPLNA
Trigger: AGCATTAAGTGGGGGTGCCCAAGACGGGGTGGATGG...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451251.5
CDS-3UTR CCA 90 bp GAGTCCTCTCATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGATGTGCACCAGAGGCTaGAGGGTGGAAGGGACGTCT +
Preference number: 4 (lower is better)
Translates to: ESSHHAQIPNLQAPAHSWMCTRG*RVEGTS
Trigger: AGACGTCCCTTCCACCCTCCAGCCTCTGGTGCACAT...CCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGATGAGAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000483223.5
CDS-3UTR CCA 90 bp TGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCGCAGTCAGGCTGAACTaGGAAGTCTCCTCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: CQFREAFWRQVNPHISHCAVRLN*EVSSSY
Trigger: GTAAGAGGAGGAGACTTCCCAGTTCAGCCTGACTGC...GCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCTTTTGGCAGCTTTCCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASFWQLS*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGGAAAGCTGCCAAAA...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476503.5
3UTR CAA 72 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGACCTGCACAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: GHETRAPDTADL*EAKAQDLHRGH
Trigger: GTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR TCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAACAGAGGACACAGCCTaGAGAAGTGTACCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPTEDTA*RSVPVQ
Trigger: TTGGACCGGTACACTTCTTCAGGCTGTGTCCTCTGT...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
CDS-3UTR TCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAATCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp ACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACATCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: TRYCRPFGGKGSGPAQRTSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...TGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR TCA 90 bp ATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACATCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: IMLRFQICKLLPTRGLGTSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...TGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR TCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGATGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGRSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GGTTGGAGAAGATCCTTCCACAGCCAGGGAAGTCACAAGGCATCAGCTCTCTTTAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GWRRSFHSQGSHKASALFRSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...AAAGAGAGCTGATGCCTTGTGACTTCCCTGGCTGTGGAAGGATCTTCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTAGAAGCAGGGCTGGGTaGCTTTTGCTACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLARSRAG*LLLRWA
Trigger: AGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTCT...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp TTGGCAGCTTTCCTAATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGCCACTGGGTGACTCTTaGGGGGCTAGAAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LAAFLILLGPICAVSSSQPLGDS*GARSRA
Trigger: AGCCCTGCTTCTAGCCCCTCAAGAGTCACCCAGTGG...CTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp CCGGGTGTCACTGTGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAACGCCCTCCAGTCCACTaGAGTGGAGCTGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGVTVQLHVLLQVFLKVERPPVH*SGAVGK
Trigger: CTTCCCCACAGCTCCACTTCAGTGGACTGGAGGGCG...TTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCACAGTGACACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp TCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGAACCCCGTCCTTCTATaGTACAGGGTGTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SCPLVASEHQLLRVVCGRNPVLL*YRVLKL
Trigger: GAGCTTCAACACCCTGTATCATAGAAGGACGGGGTT...CCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000483223.5
CDS-3UTR TCA 90 bp GGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACAGAGGACACAGCCTaGAGAAGTGTACCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GMRQEHQILQTFWRQRLRTEDTA*RSVPAS
Trigger: GCTGGCAGGTACACTTCTTCAGGCTGTGTCCTCTGT...CCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCAAAATCTGCAAGCTCCTaGCCACTCGTGGCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: DKSTRYCRPFGGKGSGPAKSASS*PLVASE
Trigger: TTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTT...TGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp TCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTCTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SPCCSFSVPGVWLPKAKALLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGATCCCGGGTGTCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGSRVSL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGACACCCGGGA...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGTCCCGGGTGTCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKSRVSL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGACACCCGGGA...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAATCCCGGGTGTCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSPCCSFSVPGVWLPKAKSRVSL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGACACCCGGGA...TTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTATCCCGGGTGTCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DDKVAASAERPGAELTDVSRVSL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGACACCCGGGA...TACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: VDDKVAASAERPGAELTDASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...ATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCTTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCCCTCCCTTACCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLPPLPL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGGTAAGGGAGG...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGTCAGAACAAAGGCCTaGGCCCTCCAGTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGVRTKA*ALQSTE
Trigger: TTCAGTGGACTGGAGGGCGCAGGCCTTTGTTCTGAC...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR GCA 90 bp TACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACAGCCTCTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YCRPFGGKGSGPAQRTQPLKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...AGGCTGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CCA 90 bp CCACAGCCAGGGAAGTCACAAGGCATCAGCTCTCTTTTGGCAGCTTTCCTAATTGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PQPGKSQGISSLLAAFLIGPTGT*RAASAG
Trigger: CCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACC...AATTAGGAAAGCTGCCAAAAGAGAGCTGATGCCTTGTGACTTCCCTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR CCA 90 bp ATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACATCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: IMLRFQICKLLPTRGLGTSPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...TGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CCA 90 bp CTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTGGGCAGGAGCTCCTGCCCACTCGTaGCCTCGGAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: LQVFLKVERLPTGWLWAGAPAHS*PRNTNF
Trigger: GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGC...TCCTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTCCCTCCTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SPCCSFSVPGVWLPKAKAPSWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGGAGGG...AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TCTCCAGTGTGGATACGTCTGTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCCCTCCTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SPVWIRLWMTRLLLVRKDPSWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGGAGGG...GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTATCCACACTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGGGAAGGCAGTAGTCTaGGGGCATCAGGCTCACTAT +
Preference number: 4 (lower is better)
Translates to: TLHSVALVPGDQASGISQGKAVV*GHQAHY
Trigger: ATAGTGAGCCTGATGCCCCCAGACTACTGCCTTCCC...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp CAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCCAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QIPNLQAPAHSWPRNTNFQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CCA 90 bp TACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACCCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: YGGLQHCLASQSACRRIHPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...GTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RLCMLALVPVQGSLLAAGEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...ACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGAGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRGCNTV*LLKALA
Trigger: GGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCC...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEGCNTV*LLKALA
Trigger: GGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTGCTCTAGGGGACCACTaGGTGACTCTTGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSALGDH*VTLEGL
Trigger: TAGCCCCTCAAGAGTCACCCAGTGGTCCCCTAGAGC...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCATCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: FATVGCNTVWLLKALAAEWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...TTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VDDKVAASAERPGAELTDCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...ATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCCAGAGTGCACCGTATTaGAGGTCAGGAGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSQSAPY*RSGGSG
Trigger: ACCTGAGCCTCCTGACCTCCAATACGGTGCACTCTG...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGACGGGAAATTTCAACTaGGCTGGGGGCGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWTGNFN*AGGGPH
Trigger: GTGTGGACCGCCCCCAGCCCAGTTGAAATTTCCCGT...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAACTGAAGTGGAGCTGTaGGGAAGGGGCGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKTEVEL*GRGERL
Trigger: AAGTCTCTCGCCCCTTCCCCACAGCTCCACTTCAGT...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCGCATCAGCTCTCTTTTaGCAGCTTTCCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFASALF*QLSWPG
Trigger: CCCTGGCCAGGAAAGCTGCCAAAAGAGAGCTGATGC...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476503.5
CDS-3UTR TCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCACAGAGGACACAGCCTaGAGAAGTGTACCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFTEDTA*RSVPVQ
Trigger: TTGGACCGGTACACTTCTTCAGGCTGTGTCCTCTGT...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
CDS-3UTR TCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGACAGAGGACACAGCCTaGAGAAGTGTACCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRTEDTA*RSVPVQ
Trigger: TTGGACCGGTACACTTCTTCAGGCTGTGTCCTCTGT...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
CDS-3UTR TCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLASRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGAGTAGTAATAAGCTGGCATCACTaGGCATCTCCTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SASSCPLVASEHQLLRVVISWHH*ASPLHP
Trigger: AGGATGAAGAGGAGATGCTCAGTGATGCCAGCTTAT...TACTACTCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp TGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CSFMCSFRCFLKLKDFPQVCWAA*GVLLSC
Trigger: ACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGAC...CTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp AGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATTGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SACRRIHRGSARQPPSLHWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...ATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCCCGGGTGTCTGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: AASAERPGAELTDVVPGVWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...GACACCCGGGACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTACTCAGGGCTCCCTTTaGAAGGAGGGTGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSTQGSL*KEGVSG
Trigger: CCCAGAAACACCCTCCTTTCAAAGGGAGCCCTGAGT...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp TCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGATATGATACAGGGTGTTaGAGCTCAGCGCTACCATGT +
Preference number: 4 (lower is better)
Translates to: SKSASSCPLVASEHQLLRYDTGC*SSALPC
Trigger: ACATGGTAGCGCTGAGCTTCAACACCCTGTATCATA...TCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000483223.5
CDS-3UTR TCA 90 bp TCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGACAGTTTCCTCATCAGTaGACTGGGGCAAGACTAAAC +
Preference number: 4 (lower is better)
Translates to: SKSASSCPLVASEHQLLRQFPHQ*TGARLN
Trigger: GTTTAGTCTTGCCCCAGTTCACTGATGAGGAAACTG...TCGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000483223.5
CDS-3UTR GCA 90 bp CTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTAAGAGCACCAGATACTaGAGACCTTTTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LAAEFTGEAQGSHRLCMLKSTRY*RPFGGK
Trigger: TTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTT...AAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASLRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCCTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: QIPNLQAPAHSWPRNTNFLRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGTCCCGGGTGTCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWSRVSL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGACACCCGGGA...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTTTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGATTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAATTTGCTACGGTGGGCTaGAACACTGTCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQFATVG*NTVWLL
Trigger: GAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp GTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VAPFQSLESGFPKPKLEERPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...CTCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YGGLQHCLASQSACRRIHRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...GTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCTCCCTTACCACTGTaGAGCTTCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFPPLPL*SFMCSF
Trigger: GAAGGAGCACATGAAGCTGCACAGTGGTAAGGGAGG...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGCCCCATCAAACTACCCTGTaGTCCCCAACTCACCCCACC +
Preference number: 4 (lower is better)
Translates to: LSFRKTKVVQLPYSPVLPHQTTL*SPTHPT
Trigger: GGTGGGGTGAGTTGGGGAGCACAGGGTAGTTTGATG...GGGCAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp TGGCTCTGGGCAGGAGAAAGACTTCTGGTGGATGTGCTGGTACTTTTTGTGGTGTCCCCACCCAGAGGTTaGCTCCATCAAACTACCCTG +
Preference number: 4 (lower is better)
Translates to: WLWAGERLLVDVLVLFVVSPPRG*LHQTTL
Trigger: CAGGGTAGTTTGATGGAGGCAACCTCTGGGTGGGGA...CACCACAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTCCTGCCCAGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp TCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPCCSFSVPGVWLPKAKASPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCTCCGAGTAGTATGTaGAAGGGAGGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLASPSSM*KGGWLG
Trigger: CCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGA...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTGGGCAGGACCCTCCTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LQVFLKVERLPTGWLWAGPSWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGGAGGG...TCCTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAAGGCTCACTATCATCTaGGGAGGAGCTGTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGRLTII*GGAVGP
Trigger: TGGACCTACAGCTCCTCCCCAGATGATAGTGAGCCT...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGAGGCTCACTATCATCTaGGGAGGAGCTGTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLERLTII*GGAVGP
Trigger: TGGACCTACAGCTCCTCCCCAGATGATAGTGAGCCT...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGACAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAACCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: TRYCRPFGGKGSGPAQRTPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...TGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496411.5
CDS-3UTR CCA 90 bp GTTCTAATTAGTTGTTATCCAAATCATGGAGCCCGTCTGGACCTCCCTTACCACATCCCAGGCCGGGGTTaGAGCAGACTGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: VLISCYPNHGARLDLPYHIPGRG*SRLGLT
Trigger: AGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGAT...GTGGTAAGGGAGGTCCAGACGGGCTCCATGATTTGGATAACAACTAATTAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR CCA 90 bp TTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCATCCCAGGCCGGGGTTaGAGCAGACTGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: FMCSFRCFLKLKDFPQAGIPGRG*SRLGLT
Trigger: AGTCAGGCCCAGTCTGCTCCAACCCCGGCCTGGGAT...GCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLAFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SPCCSFSVPGVWLPKAKAGCNTV*LLKALA
Trigger: GGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCC...AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGGCTCTGGGCAGGAGAAAGACTTCTGGTGGATGTGCTGGTACTTTTTGTGGTGGGCTGCAACACTGTCTaGCTTCTCAAAGCGCTTGCC +
Preference number: 4 (lower is better)
Translates to: WLWAGERLLVDVLVLFVVGCNTV*LLKALA
Trigger: GGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCC...CACCACAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTCCTGCCCAGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLESVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAATCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGTGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAATGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAATGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGATGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGATGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ALCRLSSWGPSIWHFSSRCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...TCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTATCATGGAGCCCGTCTaGACCTCCCTTACCACTGTG +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSIMEPV*TSLTTV
Trigger: CACAGTGGTAAGGGAGGTCCAGACGGGCTCCATGAT...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACTTGTTATCCAAATCATaGAGCCCGTCTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: YGGLQHCLASQSACRRIHLLSKS*SPSGPP
Trigger: GGGAGGTCCAGACGGGCTCCATGATTTGGATAACAA...GTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCTTGTTATCCAAATCATaGAGCCCGTCTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASLLSKS*SPSGPP
Trigger: GGGAGGTCCAGACGGGCTCCATGATTTGGATAACAA...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGCAGCGGCCTTTACTaGTTTCTAGGGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGGSGLY*FLGEGK
Trigger: CTTTCCTTCCCCTAGAAACCAGTAAAGGCCGCTGCC...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGGCAGCGGCCTTTACTaGTTTCTAGGGGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQGSGLY*FLGEGK
Trigger: CTTTCCTTCCCCTAGAAACCAGTAAAGGCCGCTGCC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
3UTR CAA 72 bp TTTTCTCCAGTGTGGATACGTCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: FSPVWIRLWMTR*LLVRKDRAQNS
Trigger: TGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTATCCACACTGGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGATAAGCTGGCATCACTaGGCATCTCCTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKISWHH*ASPLHP
Trigger: AGGATGAAGAGGAGATGCTCAGTGATGCCAGCTTAT...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp GACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGTCCCACACATTTCATCTTaGATAGGGCAGCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: DKVAASAERPGAELTDVVPHISS*IGQRPL
Trigger: TAAAGGCCGCTGCCCTATTCAAGATGAAATGTGTGG...GACTACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAAACCCCGTCCTTCTATaGTACAGGGTGTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGNPVLL*YRVLKL
Trigger: GAGCTTCAACACCCTGTATCATAGAAGGACGGGGTT...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGTTTAAGAAGAAACGGTaGCTCTCGGCGTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWFKKKR*LSASAA
Trigger: AGCAGCCGACGCCGAGAGGCACCGTTTCTTCTTAAA...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306601.9
ENST00000366471.7
CDS-3UTR GCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAACTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQLRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CTTTTTGTGGTGATTCAAATACTGCCGGTTGGAGAAGATCCTTCCACAGCCAGGGGGCTGGGTGACTTTTaGTACGGTGGGCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LFVVIQILPVGEDPSTARGLGDF*YGGLQH
Trigger: GTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCC...CCTGGCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAATCACCACAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTGGAGCCTGAGGAGATaGAGAGGGCCTGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVWSLRR*RGPGPL
Trigger: GAGGGGTCCAGGCCCTCTGCATCTCCTCAGGCTCCA...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS-3UTR GCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp CCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PSPCCSFSVPGVWLPKAKRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...TTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TGGCTCTGGGCAGGAGAAAGACTTCTGGTGGATGTGCTGGTACTTTTTGTGGTGCTGAAGAAGTGTACCTaGCAGCAGGAGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WLWAGERLLVDVLVLFVVLKKCT*QQEKRQ
Trigger: CTGCCTCTTCTCCTGCTGGCAGGTACACTTCTTCAG...CACCACAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTCCTGCCCAGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: TLHSVALVPGDQASGISQILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGATACTGCAGACCTTTTaGAGGCAAAGGCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEILQTF*RQRLRT
Trigger: GGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTAT...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp TTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCGAGTGCTGCAGGGGCTaGTGGTGTCTCCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FMCSFRCFLKLKDFPQAGECCRG*WCLPLF
Trigger: AAAGAGGGGGAGACACCACCAGCCCCTGCAGCACTC...GCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGGCACAGCAAGAGGACTaGAGAGTGCTGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILSFRKTKVVQLPYSPVLAQQED*RVLQGL
Trigger: CAGCCCCTGCAGCACTCTCCAGTCCTCTTGCTGTGC...CAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
ENST00000476503.5
CDS-3UTR CCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCCAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ACAGATGTAGTCCCGGGTGTCACTGTGCAGCTTCATGTGCTCCTTCAGGTGTTTCCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: TDVVPGVTVQLHVLLQVFPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...AAACACCTGAAGGAGCACATGAAGCTGCACAGTGACACCCGGGACTACATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCCCTGACTCCCAGTGCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVPDSQC*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGCACTGGGAGTCAGG...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS-3UTR CCA 90 bp CAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: QTLSLLLLFSPWSLASQSSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...GCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LQHCLASQSACRRIHRGSSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...GCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AGAATTCACAGGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RIHRGSARQPPSLHACAGEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...ACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCCTGTGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GATACGTCTGTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAAGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: DTSVDDKVAASAERPGAEVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...TTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAGACGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGCCCTGGGGACCAAGCATCTaGCATTTCTCAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: LSFRKTKVVQLPYSPVLPWGPSI*HFSSRP
Trigger: GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCA...GGGCAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
ENST00000476503.5
CDS-3UTR CCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTTGTCGCCTTAGTTCCTaGGGACCAAGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSCRLSS*GPSIWH
Trigger: ATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAAATTTCAACTGGGCTaGGGGCGGTCCACACATTTC +
Preference number: 4 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWKFQLG*GRSTHF
Trigger: GAAATGTGTGGACCGCCCCCAGCCCAGTTGAAATTT...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CCA 90 bp GTCACAAGGCATCAGCTCTCTTTTGGCAGCTTTCCTAATTCTCTTGGGGCCAATTTCTGGGTCACCCTGTaGTCCCTCTTCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VTRHQLSFGSFPNSLGANFWVTL*SLFPLA
Trigger: AGCCAGAGGGAAGAGGGACCACAGGGTGACCCAGAA...ATTGGCCCCAAGAGAATTAGGAAAGCTGCCAAAAGAGAGCTGATGCCTTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp TTGGCAGCTTTCCTAATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGACAGAGGACACAGCCTaGAGAAGTGTACCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LAAFLILLGPICAVSSSQTEDTA*RSVPVQ
Trigger: TTGGACCGGTACACTTCTTCAGGCTGTGTCCTCTGT...CTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR TCA 90 bp TCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCATAAGCTGGCATCACTaGGCATCTCCTCTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SQADPLLVAPFQSLESGFISWHH*ASPLHP
Trigger: AGGATGAAGAGGAGATGCTCAGTGATGCCAGCTTAT...GAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAACCACACATTTCATCTTaGATAGGGCAGCGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQPHISS*IGQRPL
Trigger: TAAAGGCCGCTGCCCTATTCAAGATGAAATGTGTGG...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR TCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAATATGATACAGGGTGTTaGAGCTCAGCGCTACCATGT +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQYDTGC*SSALPC
Trigger: ACATGGTAGCGCTGAGCTTCAACACCCTGTATCATA...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGAAGAGCACCAGATACTaGAGACCTTTTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKKSTRY*RPFGGK
Trigger: TTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTT...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAAGAGCACCAGATACTaGAGACCTTTTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSKSTRY*RPFGGK
Trigger: TTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTT...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp GTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTCAAGAGCACCAGATACTaGAGACCTTTTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VALVPGDQASGISQADPLKSTRY*RPFGGK
Trigger: TTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTT...GAGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CTCAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTAAGAGCACCAGATACTaGAGACCTTTTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LRFQICKLLPTRGLGTPTKSTRY*RPFGGK
Trigger: TTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTT...AGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR GCA 90 bp CCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACAAGAGCACCAGATACTaGAGACCTTTTGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PDTADLLEAKAQDLHRGHKSTRY*RPFGGK
Trigger: TTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTT...GTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR GCA 90 bp TCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTCTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: SPCCSFSVPGVWLPKAKALRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR GCA 90 bp CCTCTTGAGTCCTCTCATCATGCTCAGATTCCAAATCTGCAAGCTCCTGCCCACAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLESSHHAQIPNLQAPAHRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...GTGGGCAGGAGCTTGCAGATTTGGAATCTGAGCATGATGAGAGGACTCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR GCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTAGACCCTCTCCTTGTTaGTCCTTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSRPSPC*SFSVPG
Trigger: TCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCT...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGCCCCAGGAGAAGGTATaGCCTGCTGAGCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: CSFMCSFRCFLKLKDFPQPQEKV*PAEHSH
Trigger: GTGGGAGTGCTCAGCAGGCCATACCTTCTCCTGGGG...CTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGATCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAATCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TTGGCAGCTTTCCTAATTCTCTTGGGGCCAATTTGTGCAGTGTCCTCATCCCAGTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LAAFLILLGPICAVSSSQSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...CTGGGATGAGGACACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp GTTCTAATTAGTTGTTATCCAAATCATGGAGCCCGTCTGGACCTCCCTTACCACAGCCATCAGGTTACCTaGCCAGGGCCTCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLISCYPNHGARLDLPYHSHQVT*PGPQSA
Trigger: AGCAGACTGAGGCCCTGGCCAGGTAACCTGATGGCT...GTGGTAAGGGAGGTCCAGACGGGCTCCATGATTTGGATAACAACTAATTAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR CCA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTAAATTTCAACTGGGCTaGGGGCGGTCCACACATTTC +
Preference number: 4 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSKFQLG*GRSTHF
Trigger: GAAATGTGTGGACCGCCCCCAGCCCAGTTGAAATTT...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
3UTR CAA 72 bp TGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCTGGCTCTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CSFMCSFRCFLK*KDFPQAGSGQE
Trigger: CTCCTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTCGGCTGTGGGCATaGGACAAGAGCACCAGATAC +
Preference number: 4 (lower is better)
Translates to: FMCSFRCFLKLKDFPQAGSRLWA*DKSTRY
Trigger: GTATCTGGTGCTCTTGTCTCATGCCCACAGCCGAGA...GCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: FATVGCNTVWLLKALAAEWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...TTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR GCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCCTGCTGAGCTGTGGCTaGACCCTGACTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVLLSCG*TLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAG...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS-3UTR CCA 90 bp CTTTTTGTGGTGATTCAAATACTGCCGGTTGGAGAAGATCCTTCCACAGCCAGGCAGGTGGAGGAGCTCTaGAACTCAATGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LFVVIQILPVGEDPSTARQVEEL*NSMRML
Trigger: CAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTG...CCTGGCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAATCACCACAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: QADPLLVAPFQSLESGFPEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: ISQADPLLVAPFQSLESGVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
3UTR CAA 72 bp ATTCTTCAGAACCTAGACACACTAGATCCTGAGACATaGCTCCCTTCCCCACCCAGAGGTTGCCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: ILQNLDTLDPET*LPSPPRGCLHQ
Trigger: TTGATGGAGGCAACCTCTGGGTGGGGAAGGGAGCAATGTCTCAGGATCTAGTGTGTCTAGGTTCTGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR TCA 90 bp TGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGTGGCTTGGGTGCCTCTaGAGGTGTAGGGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CSFMCSFRCFLKLKDFPQWLGCL*RCRAQR
Trigger: TCTTTGAGCCCTACACCTTCAGAGGCACCCAAGCCA...CTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTTGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SVALVPGDQASGISQADPWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGTGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR TCA 90 bp CTTACCACTGTGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGAAGGAGAGCTCATTGCTaGGGAAGCAGGGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTTVQLHVLLQVFLKVERRRAHC*GSRVGA
Trigger: GGCTCCAACCCTGCTTCCTCAGCAATGAGCTCTCCT...TCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCACAGTGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR CCA 90 bp TCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTGGGCAGTCAAATACTGCCGGTTaGAGAAGATCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SFRCFLKLKDFPQAGSGQSNTAG*RRSFHS
Trigger: GCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGA...CTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp CTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: LSLLLLFSPWSLASQSQSEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...GCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCAT +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVFREAF*RQVNPH
Trigger: ATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAA...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS-3UTR CCA 90 bp TTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCAGTCCCTGGAGTCTaGCTTCCCAAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: FMCSFRCFLKLKDFPQAGSVPGV*LPKAKA
Trigger: AGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGA...GCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp ATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGCACTACTGGGCAACCTaGCCTCTTGAGTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILSFRKTKVVQLPYSPVLHYWAT*PLESSH
Trigger: ATGAGAGGACTCAAGAGGCCAGGTTGCCCAGTAGTG...CAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366471.7
CDS-3UTR TCA 90 bp TTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGCCCTGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LSFRKTKVVQLPYSPVLPWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...GGGCAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
ENST00000476503.5
CDS-3UTR TCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCAGACACACTAGATCCTaGGACATTGCTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVRHTRS*DIAPFP
Trigger: GGGGAAGGGAGCAATGTCTCAGGATCTAGTGTGTCT...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR GCA 90 bp ATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTTGCTCAGATTCCAAATCTaGAAGCTCCTGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: ILSFRKTKVVQLPYSPVLLRFQI*KLLPTR
Trigger: ACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTGAG...CAAGACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS-3UTR GCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCGCTTCTCAAAGCGCTTaGCGCAGAATTCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVASQSA*RRIHRG
Trigger: TCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGC...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS-3UTR CCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCCCTGACTTCTGCAGGTaGAGGAGCTCTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVPDFCR*RSSGTQ
Trigger: TTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGG...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS-3UTR CCA 90 bp CCGGGTGTCACTGTGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAGTGTGGATACGTCTGTaGATGACAAGGTTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: PGVTVQLHVLLQVFLKVEVWIRL*MTRLLL
Trigger: TAGCAGCAACCTTGTCATCCACAGACGTATCCACAC...TTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCACAGTGACACCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CCA 90 bp TTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCGAGAAAGACTTCTGGTaGATGTGCTGGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: FMCSFRCFLKLKDFPQAGEKDFW*MCWYFL
Trigger: CAAAAAGTACCAGCACATCCACCAGAAGTCTTTCTC...GCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR TCA 90 bp TTTATTTTGTCCTTTAGGAAGACTAAAGTAGTCCAGCTCCCCTACAGCCCAGTCTGGTACTTTTTGTGGTaGTTCAAATACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: FILSFRKTKVVQLPYSPVWYFLW*FKYCRL
Trigger: CAACCGGCAGTATTTGAATCACCACAAAAAGTACCA...GACTGGGCTGTAGGGGAGCTGGACTACTTTAGTCTTCCTAAAGGACAAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000463519.5
CDS GCA 90 bp GGCACCACTGCTCCATGTGGCCGCCCAGGCGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCCGCCGCTTCTCCCGCCGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GTTAPCGRPGGCGTC*GARPAAAASPAACR
Trigger: CCTGCAGGCGGCGGGAGAAGCGGCGGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS GCA 90 bp GGAGGCACCACTGCTCCATGTGGCCGCCCAGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCTGCCGCCGCTTCTCCCGCCGCCTGC +
Preference number: 5 (lower is better)
Translates to: GGTTAPCGRPGGCGT*CGARPAAAASPAAC
Trigger: GCAGGCGGCGGGAGAAGCGGCGGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS GCA 90 bp GCGCCTGCGCCTGCGCCTCCCGGGCCTAGCGAGCAGGCCCGGAGCTaGTGGAAGACAGGGGCCCACCTCGCGCGCGCAGCGTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: APAPAPPGPSEQARS*WKTGAHLARAAFLF
Trigger: AAAGAGAAACGCTGCGCGCGCGAGGTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTGCTCGCTAGGCCCGGGAGGCGCAGGCGCAGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000470787.6
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000497847.1
ENST00000530986.5
ENST00000533614.5
CDS GCA 90 bp ACTTGCTGCGGCGCGCGTCCAGCTGCCGCCGCTTCTCCCGCCGCCTaGAGGACACGTCCACCGCCGGGGAGGAAGCCATGTGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: TCCGARPAAAASPAA*RTRPPPGRKPCAPE
Trigger: CTCTGGTGCACATGGCTTCCTCCCCGGCGGTGGACGTGTCCTGCAGGCGGCGGGAGAAGCGGCGGCAGCTGGACGCGCGCCGCAGCAAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS TCA 90 bp AAGAAGAAACGGTGCCTCTCGGCGTCGGCTGCTGTAGCCCGGAACTaGGGCCCGCGCCCCAGAGGGAGGGGCGAGTCGGAGGCCGACGCC +
Preference number: 5 (lower is better)
Translates to: KKKRCLSASAAVARN*GPRPRGRGESEADA
Trigger: GGCGTCGGCCTCCGACTCGCCCCTCCCTCTGGGGCGCGGGCCTCAGTTCCGGGCTACAGCAGCCGACGCCGAGAGGCACCGTTTCTTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534456.1
CDS GCA 90 bp ATGTGCACCAGAGGCTGGAGGGTGGAAGGGACGTCTTCAGCGCCCTaGCGATCTCGGGGGTCGGGGACCCGGCTCCACCTGTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: MCTRGWRVEGTSSAP*RSRGSGTRLHLCAP
Trigger: GGGGGCGCACAGGTGGAGCCGGGTCCCCGACCCCCGAGATCGGCAGGGCGCTGAAGACGTCCCTTCCACCCTCCAGCCTCTGGTGCACAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533976.1
CDS CCA 90 bp AGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCCATGTaGCCGCCCAGGCGGATGCGGCACTTGCTGCGGCGCGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: REKPSRSLRRHHCSM*PPRRMRHLLRRASS
Trigger: GCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS GCA 90 bp TGCGAGTGCAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGGCGGATGCGGCACTTGCTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: CECREKPSRSLRRHH*SMWPPRRMRHLLRR
Trigger: GCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS TCA 90 bp GGAACTTGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCTCCTTaGGGAGGCACCACTGCTCCATGTGGCCGCCCAGGCGGATGCGGC +
Preference number: 5 (lower is better)
Translates to: GTWRAASAGRSPAAP*GGTTAPCGRPGGCG
Trigger: GCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS-3UTR CAA 90 bp ATCTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: ILAARPPKPGHQAALSAARSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...TGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS-3UTR CAA 90 bp CGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAGGCGGATGCGGCACTaGCTGCGGCGCGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RLCMLALVPVQGSLLAAGRRMRH*LRRASS
Trigger: GCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCT...ACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS GCA 90 bp GGCACCAGGCTGCACTCTCGGCGGTCCAACAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCAC +
Preference number: 5 (lower is better)
Translates to: GTRLHSRRSNRNLAS*ECREKPSRSLRRHH
Trigger: GTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGCCGAGAGTGCAGCCTGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470787.6
CDS GCA 90 bp GCAGCAGGACAGGCCCGGTCCAACAGGAACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: AAGQARSNRNLASCE*REKPSRSLRRHHCS
Trigger: GGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGGCCTGTCCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS GCA 90 bp CTCCCGGCCCCTAACCGGTCCAACAGGAACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LPAPNRSNRNLASCE*REKPSRSLRRHHCS
Trigger: GGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTAGGGGCCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497847.1
ENST00000530699.1
ENST00000533976.1
ENST00000534456.1
CDS GCA 90 bp GCCCTTCTCCCGGCCCCTAACCGGTCCAACAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCAC +
Preference number: 5 (lower is better)
Translates to: ALLPAPNRSNRNLAS*ECREKPSRSLRRHH
Trigger: GTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTAGGGGCCGGGAGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497847.1
ENST00000530699.1
ENST00000533976.1
ENST00000534456.1
CDS-3UTR CAA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: AARPPKPGHQAALSAVGMDTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CAA 90 bp GCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGTACTCAGGGCTCCCTTaGAAAGGAGGGTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: AARPPKPGHQAALSAVGMYSGLP*KGGCFW
Trigger: CCAGAAACACCCTCCTTTCAAAGGGAGCCCTGAGTA...CATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS GCA 90 bp AGGCTGCACTCTCGGCGGTCCAACAGGAACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RLHSRRSNRNLASCE*REKPSRSLRRHHCS
Trigger: GGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGCCGAGAGTGCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470787.6
CDS GCA 90 bp GTCACACAGGCCGTCCGGTCCAACAGGAACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: VTQAVRSNRNLASCE*REKPSRSLRRHHCS
Trigger: GGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGACGGCCTGTGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483223.5
ENST00000496053.1
ENST00000496411.5
ENST00000533647.1
CDS-3UTR CAA 90 bp GAGAAGAGGCAGGTCAGGACTCAGGTGGCCAGCCACCCTCAGCCCTGGGCACTCCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: EKRQVRTQVASHPQPWALRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...GAGTGCCCAGGGCTGAGGGTGGCTGGCCACCTGAGTCCTGACCTGCCTCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
ENST00000530986.5
ENST00000533647.1
CDS-3UTR CAA 90 bp CCACCCTCAGCCCTGGGCACTCACACATGTAAGGGGCCAGCCCTAAGGGCCGCTCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PPSALGTHTCKGPALRAARSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...AGCGGCCCTTAGGGCTGGCCCCTTACATGTGTGAGTGCCCAGGGCTGAGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS GCA 90 bp CCACAAGTCACACAGGCCGTCCGGTCCAACAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCAC +
Preference number: 5 (lower is better)
Translates to: PQVTQAVRSNRNLAS*ECREKPSRSLRRHH
Trigger: GTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGACGGCCTGTGTGACTTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483223.5
ENST00000496053.1
ENST00000496411.5
ENST00000533647.1
CDS GCA 90 bp CACAGAGGACACAGCCGGTCCAACAGGAACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: HRGHSRSNRNLASCE*REKPSRSLRRHHCS
Trigger: GGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGCTGTGTCCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533614.5
CDS-3UTR CAA 90 bp CGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGCACAGAGGACACAGCCTGAAGGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: RSPGTRLHSRLHRGHSLKGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...CTTCAGGCTGTGTCCTCTGTGCAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533647.1
CDS TCA 90 bp CTTTTGGCAGCTTTCCTGGCCAGGGCCTCAGTCTGCTGGGCCGCTTaGGGGGTCCTGCTGAGCTGTGGCTGCACCCTGACTTCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LLAAFLARASVCWAA*GVLLSCGCTLTSAG
Trigger: ACCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGACTGAGGCCCTGGCCAGGAAAGCTGCCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476503.5
CDS GCA 90 bp TACCTGCACAGAGGACACAGCCGGTCCAACAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCAC +
Preference number: 5 (lower is better)
Translates to: YLHRGHSRSNRNLAS*ECREKPSRSLRRHH
Trigger: GTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGCTGTGTCCTCTGTGCAGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533614.5
CDS-3UTR CAA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCAGGCGGATGCGGCACTaGCTGCGGCGCGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASRRMRH*LRRASS
Trigger: GCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCT...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp CAGATTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCAGGCGGATGCGGCACTaGCTGCGGCGCGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QIPNLQAPAHSWPRNTNFRRMRH*LRRASS
Trigger: GCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCT...GAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAATCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CAA 90 bp GAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCACCAGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: EARAPGCTLGCGHETRAPGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...TGGTGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CAA 90 bp GGGGAAGCGCAAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GEAQGSHRLCMLALVPVQTVSAC*RWCQFR
Trigger: CCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT...CTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTTGCGCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS TCA 90 bp GGCACTCACACATGTAAGGGGCCAGCCCTAAGGGCCGCTATTCGCTaGGACCATGAGGAGGGGAGCAGGACCCTCGGAGGCCACAAGTCA +
Preference number: 5 (lower is better)
Translates to: GTHTCKGPALRAAIR*DHEEGSRTLGGHKS
Trigger: TGACTTGTGGCCTCCGAGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCTTAGGGCTGGCCCCTTACATGTGTGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000463519.5
ENST00000478107.5
ENST00000483223.5
ENST00000496053.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533647.1
ENST00000534456.1
CDS GCA 90 bp CCTGAAGAAGTGTACCGGTCCAACAGGAACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: PEEVYRSNRNLASCE*REKPSRSLRRHHCS
Trigger: GGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTACACTTCTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000483791.6
ENST00000495731.5
ENST00000496231.1
ENST00000534660.5
CDS CCA 90 bp GGCAGCGGCCTTTACTGGTTTCTAGGGGAAGGAAAGGTCGTGTCCTaGCGTGCAGCTGGGGGCGCTCTTCATAGTTGGGTCGAGTGGCGG +
Preference number: 5 (lower is better)
Translates to: GSGLYWFLGEGKVVS*RAAGGALHSWVEWR
Trigger: CCGCCACTCGACCCAACTATGAAGAGCGCCCCCAGCTGCACGCCAGGACACGACCTTTCCTTCCCCTAGAAACCAGTAAAGGCCGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451251.5
CDS-3UTR CAA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGCGGATGCGGCACTaGCTGCGGCGCGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWRRMRH*LRRASS
Trigger: GCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCT...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAGGCGGATGCGGCACTaGCTGCGGCGCGCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRRRMRH*LRRASS
Trigger: GCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCT...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp CTTGGCCGCCAGGCCCCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: LGRQAPEARAPGCTLGCGRCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...CCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGGGGCCTGGCGGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS GCA 90 bp GGTAAAGTGAGAAACCGGTCCAACAGGAACTTGGCGAGCTGCGAGTaGAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: GKVRNRSNRNLASCE*REKPSRSLRRHHCS
Trigger: GGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTTCTCACTTTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS GCA 90 bp CGTCCTGGTAAAGTGAGAAACCGGTCCAACAGGAACTTGGCGAGCTaGGAGTGCAGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCAC +
Preference number: 5 (lower is better)
Translates to: RPGKVRNRSNRNLAS*ECREKPSRSLRRHH
Trigger: GTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTTCTCACTTTACCAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS-3UTR CAA 90 bp CCCGAAGCCCGGGCACCAGGCTGCACTCTCGGCTGTGGGCATGAGACAAGAGCAGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: PEARAPGCTLGCGHETRADTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...TGCTCTTGTCTCATGCCCACAGCCGAGAGTGCAGCCTGGTGCCCGGGCTTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS TCA 90 bp GAGAGAAGAGGCAAAAGGATAGCCACCTTCCACGGAGAGATGAACTaGGCTGACCCGGCAGGCATGCTCCTCTGTCCCCTTCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: ERRGKRIATFHGEMN*ADPAGMLLCPLPGP
Trigger: GGGGCCAGGAAGGGGACAGAGGAGCATGCCTGCCGGGTCAGCTCAGTTCATCTCTCCGTGGAAGGTGGCTATCCTTTTGCCTCTTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS TCA 90 bp TGGCAGGTGTGGAGCCAAACCCCGTCCTTCTATGATACAGGGTGTTaGAGCTCAGCGCTACCATGTGAGTGTCGTCGGGTGGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: WQVWSQTPSFYDTGC*SSALPCECRRVGGR
Trigger: CCTGCCTCCCACCCGACGACACTCACATGGTAGCGCTGAGCTTCAACACCCTGTATCATAGAAGGACGGGGTTTGGCTCCACACCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS CCA 90 bp ATACAGGGTGTTGAAGCTCAGCGCTACCATGTGAGTGTCGTCGGGTaGGAGGCAGGCAGACAGAAGCAGTCAGAACAAAGGCCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: IQGVEAQRYHVSVVG*EAGRQKQSEQRPAP
Trigger: GGGCGCAGGCCTTTGTTCTGACTGCTTCTGTCTGCCTGCCTCCCACCCGACGACACTCACATGGTAGCGCTGAGCTTCAACACCCTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CAA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp TACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACAGCCTCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: YCRPFGGKGSGPAQRTQPRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...AGGCTGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CAA 90 bp GAAGCAGGGCTGGGTGACTTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: EAGLGDFCYGGLQHCLASGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...AGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAAGTCACCCAGCCCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp GCCTCGGAACACCAACTTCTCCGAGTAGTATGTGGAAGGGAGGCTGGCTTGGGTGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: ASEHQLLRVVCGREAGLGGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...ACCCAAGCCAGCCTCCCTTCCACATACTACTCGGAGAAGTTGGTGTTCCGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CAA 90 bp GTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: VQGSLLAAGKPAYLTLQGGFSKR*PQNSQG
Trigger: CCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCC...CCCCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS TCA 90 bp GCAGACAGAAGCAGTCAGAACAAAGGCCTGCGCCCTCCAGTCCACTaGAGTGGAGCTGTGGGGAAGGGGCGAGAGACTTTCACGGGAAAT +
Preference number: 5 (lower is better)
Translates to: ADRSSQNKGLRPPVH*SGAVGKGRETFTGN
Trigger: ATTTCCCGTGAAAGTCTCTCGCCCCTTCCCCACAGCTCCACTTCAGTGGACTGGAGGGCGCAGGCCTTTGTTCTGACTGCTTCTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451251.5
ENST00000463519.5
ENST00000530699.1
CDS CCA 90 bp GTCAGAACAAAGGCCTGCGCCCTCCAGTCCACTGAAGTGGAGCTGTaGGGAAGGGGCGAGAGACTTTCACGGGAAATTTCAACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VRTKACALQSTEVEL*GRGERLSREISTGL
Trigger: CAGCCCAGTTGAAATTTCCCGTGAAAGTCTCTCGCCCCTTCCCCACAGCTCCACTTCAGTGGACTGGAGGGCGCAGGCCTTTGTTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451251.5
ENST00000463519.5
ENST00000530699.1
CDS CCA 90 bp ACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCATATCTCACACCACTGTGCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: TVSACLRWCQFREAF*RQVNPHISHHCAAS
Trigger: TGAAGCTGCACAGTGGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470787.6
CDS-3UTR CAA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SVALVPGDQASGISQADPRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp GGGCATGAGACAAGAGCACCAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GHETRAPDTADLLEAKAQRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...CTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTGGTGCTCTTGTCTCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CAA 90 bp CAGATACTGCAGACCTTTTGGAGGCAAAGGCTCAGGACCTGCACAGAGGACACACGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: QILQTFWRQRLRTCTEDTRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...TGTGTCCTCTGTGCAGGTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483223.5
ENST00000496411.5
ENST00000528141.5
CDS-3UTR CAA 90 bp AAGGCAGCCACCGTCTCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: KAATVSACLRWCQFREAFDTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...GAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGTGGCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSTVSAC*RWCQFR
Trigger: CCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp ACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: TLSGFSKRLPQNSQGKRKTVSAC*RWCQFR
Trigger: CCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT...CTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSRSNRN*ASCECR
Trigger: CCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCG...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp ACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTGACAAGGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: TLTSAGGGALELNEDADKGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...CTTGTCAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000496411.5
CDS-3UTR CAA 90 bp CCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGGGAAGGGAGGCTGGCTaGGGTGCCTCTGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: PLLVAPFQSLESGFPKPKGREAG*GASEGV
Trigger: TACACCTTCAGAGGCACCCAAGCCAGCCTCCCTTCC...CTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp TGGGGCCAATTTGTGCAGTGTCCTCATCCCAGGCCGGGGTTGGAGCAGACTGGGGCTTTCCTAATTCTCTaGGGGCCAATTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: WGQFVQCPHPRPGLEQTGAFLIL*GPICAV
Trigger: CACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGC...CCCAGTCTGCTCCAACCCCGGCCTGGGATGAGGACACTGCACAAATTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LVAPFQSLESGFPKPKLETVSAC*RWCQFR
Trigger: CCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSPCCSFSVPGVWLPKAKTVSAC*RWCQFR
Trigger: CCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT...TTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: TLHSVALVPGDQASGISQTVSAC*RWCQFR
Trigger: CCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGACCGTCTCTGCATGCTaGCGCTGGTGCCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWTVSAC*RWCQFR
Trigger: CCTGAACTGGCACCAGCGCAAGCATGCAGAGACGGT...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp TTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAAGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: FATVGCNTVWLLKALAAEGFSKR*PQNSQG
Trigger: CCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCC...TTCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACATTCCCCACCCAGAGGTaGCCTCCATCAAACTACCCT +
Preference number: 5 (lower is better)
Translates to: LVPVQGSLLAAGKPAYLTFPTQR*PPSNYP
Trigger: AGGGTAGTTTGATGGAGGCAACCTCTGGGTGGGGAA...TGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS CCA 90 bp CAGAAGCAGTCAGAACAAAGGCCTGCGCCCTCCAGTCCACTGAAGTaGAGCTGTGGGGAAGGGGCGAGAGACTTTCACGGGAAATTTCAA +
Preference number: 5 (lower is better)
Translates to: QKQSEQRPAPSSPLK*SCGEGARDFHGKFQ
Trigger: TTGAAATTTCCCGTGAAAGTCTCTCGCCCCTTCCCCACAGCTCCACTTCAGTGGACTGGAGGGCGCAGGCCTTTGTTCTGACTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451251.5
ENST00000463519.5
ENST00000530699.1
CDS-3UTR CAA 90 bp TTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: FQICKLLPTRGLGTPTSPDTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...CGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496411.5
CDS-3UTR CAA 90 bp ATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: MLALVPVQGSLLAAGKPAFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...TGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp TTCCAAATCTGCAAGCTCCTGCCCACTCGTGGCCTCGGAACACCAACTTCTCCGCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: FQICKLLPTRGLGTPTSPLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...CGGAGAAGTTGGTGTTCCGAGGCCACGAGTGGGCAGGAGCTTGCAGATTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR CAA 90 bp CAGGGAAGCCTTCTGGCGGCAGGTAAACCCGCATATCTCACACTGCAGGGGTTTCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: QGSLLAAGKPAYLTLQGFLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...AAACCCCTGCAGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp AGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: SRPSPCCSFSVPGVWLPKGFSKR*PQNSQG
Trigger: CCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCC...TTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEGFSKR*PQNSQG
Trigger: CCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp ACCCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: TLHSVALVPGDQASGISQGFSKR*PQNSQG
Trigger: CCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCC...TTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp GATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATGTAGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: DDKVAASAERPGAELTDVGFSKR*PQNSQG
Trigger: CCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCC...TACATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp TCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGTCAGAGTGCACCGTATaGGAGGTCAGGAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SLLLLFSPWSLASQSQSWSECTV*EVRRLR
Trigger: CCTGAGCCTCCTGACCTCCAATACGGTGCACTCTGA...CCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGCATCAGCTCTCTTTaGGCAGCTTTCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEGISSL*AAFLAR
Trigger: CCTGGCCAGGAAAGCTGCCAAAAGAGAGCTGATGCC...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476503.5
CDS TCA 90 bp GGGACCCGGCTCCACCTGCCGTTAGGGCCTCAGTTTCCTCATCAGTaGACTGGGGCAAGACTAAACTATTTCAATAGCAGTGGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: GTRLHLPLGPQFPHQ*TGARLNYFNSSGRC
Trigger: ACACCTGCCACTGCTATTGAAATAGTTTAGTCTTGCCCCAGTTCACTGATGAGGAAACTGAGGCCCTAACGGCAGGTGGAGCCGGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463519.5
ENST00000483223.5
CDS-3UTR CAA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSDTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp GCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: ADPLLVAPFQSLESGFPKDTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...CTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp TCTGCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTGGCGGCAGGTAAACGCTTTCCTAATTCTCTaGGGGCCAATTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SACLRWCQFREAFWRQVNAFLIL*GPICAV
Trigger: CACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGC...GTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCACTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: QADPLLVAPFQSLESGFPLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGGGCTTCTCAAAGCGCTaGCCGCAGAATTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWGFSKR*PQNSQG
Trigger: CCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCC...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: QADPLLVAPFQSLESGFPKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...TGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp TTTTGCTACGGTGGGCTGCAACACTGTCTGGCTTCTCAAAGCGCTTGCCGCAGAAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: FCYGGLQHCLASQSACRRKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...TCTGCGGCAAGCGCTTTGAGAAGCCAGACAGTGTTGCAGCCCACCGTAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CCTGCACTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: PALCRLSSWGPSIWHFSSKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...GCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp GTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: VDDKVAASAERPGAELTDKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...ATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp TGGCTTCTCAAAGCGCTTGCCGCAGAATTCACAGGGGAAGCGCAAGGCAGCCACTCCACACATTTCATCTaGAATAGGGCAGCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: WLLKALAAEFTGEAQGSHSTHFI*NRAAAF
Trigger: AAAGGCCGCTGCCCTATTCAAGATGAAATGTGTGGA...GTGGCTGCCTTGCGCTTCCCCTGTGAATTCTGCGGCAAGCGCTTTGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS-3UTR CAA 90 bp TTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LLLLFSPWSLASQSQSWRDTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...CCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: SVALVPGDQASGISQADPLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: PCCSFSVPGVWLPKAKAGKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...TCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGAAGCAGACCCTCTCCTaGTTGCTCCTTTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LVAPFQSLESGFPKPKLEKQTLS*LLLFSP
Trigger: GGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT...CTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CCACAGCCAGGGAAGTCACAAGGCATCAGCTCTCTTTTGGCAGCTTTCCTAATTTCAGAGTGCACCGTATaGGAGGTCAGGAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PQPGKSQGISSLLAAFLISECTV*EVRRLR
Trigger: CCTGAGCCTCCTGACCTCCAATACGGTGCACTCTGA...AATTAGGAAAGCTGCCAAAAGAGAGCTGATGCCTTGTGACTTCCCTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS TCA 90 bp ACGGGAAATTTCAACTGGGCTGGGGGCGGTCCACACATTTCATCTTaGATAGGGCAGCGGCCTTTACTGGTTTCTAGGGGAAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: TGNFNWAGGGPHISS*IGQRPLLVSRGRKG
Trigger: ACCTTTCCTTCCCCTAGAAACCAGTAAAGGCCGCTGCCCTATTCAAGATGAAATGTGTGGACCGCCCCCAGCCCAGTTGAAATTTCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp CATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGGATACTGCAGACCTTTaGGAGGCAAAGGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: HFSSRPSPCCSFSVPGVWDTADL*EAKAQD
Trigger: GTCCTGAGCCTTTGCCTCCAAAAGGTCTGCAGTATC...CCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCTTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp GAGCCCGTCTGGACCTCCCTTACCACTGTGCAGCTTCATGTGCTCCTTCAGGTGAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: EPVWTSLTTVQLHVLLQVRCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...CACCTGAAGGAGCACATGAAGCTGCACAGTGGTAAGGGAGGTCCAGACGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412341.6
CDS-3UTR CAA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCCTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: ISQADPLLVAPFQSLESGLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCTCCACACATTTCATCTaGAATAGGGCAGCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASSTHFI*NRAAAF
Trigger: AAAGGCCGCTGCCCTATTCAAGATGAAATGTGTGGA...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS-3UTR CAA 90 bp ACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAGCTTTCCTAATTCTCTaGGGGCCAATTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TLSLLLLFSPWSLASQSQAFLIL*GPICAV
Trigger: CACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGC...TTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp TCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTGCTTTCCTAATTCTCTaGGGGCCAATTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SVALVPGDQASGISQADPAFLIL*GPICAV
Trigger: CACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGC...AGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp AAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAGCTTTCCTAATTCTCTaGGGGCCAATTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: KQTLSLLLLFSPWSLASQAFLIL*GPICAV
Trigger: CACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGC...TTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp ACCCTGACTTCTGCAGGTGGAGGAGCTCTGGAACTCAATGAGGATGCTGACAAGTTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: TLTSAGGGALELNEDADKFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...CTTGTCAGCATCCTCATTGAGTTCCAGAGCTCCTCCACCTGCAGAAGTCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412341.6
ENST00000463519.5
CDS-3UTR CAA 90 bp TGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCTCTTTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: CRLSSWGPSIWHFSSRPSFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...AGAGGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp TGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAGCTGGAGGATTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: CCSFSVPGVWLPKAKAGGFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...TCCTCCAGCTTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTGGCTCTGGGCAGGACTGTGGATGACAAGGTaGCTGCTAGTGCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: LQVFLKVERLPTGWLWAGLWMTR*LLVRKD
Trigger: GTCTTTCCGCACTAGCAGCAACCTTGTCATCCACAG...TCCTGCCCAGAGCCAGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp ATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: ISQADPLLVAPFQSLESGFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...GCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: LKQTLSLLLLFSPWSLASRCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...GGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTCTGTCGCCTTAGTTCCTGGGGACCAAGCATCTGGCATTTCTCAAGCAGACCCAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: LCRLSSWGPSIWHFSSRPRCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...GGGTCTGCTTGAGAAATGCCAGATGCTTGGTCCCCAGGAACTAAGGCGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp GTGGATGACAAGGTTGCTGCTAGTGCGGAAAGACCGGGCGCAGAACTCACAGATAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: VDDKVAASAERPGAELTDRCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...ATCTGTGAGTTCTGCGCCCGGTCTTTCCGCACTAGCAGCAACCTTGTCATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTTCCCAAAGCCAAAAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: PSPCCSFSVPGVWLPKAKRCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...TTTGGCTTTGGGAAGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS GCA 90 bp ACTCTGGGTGACACCCCTGGTTCACCTAATCATGAATGCACTATCTaGTGCAGAGGGGAAAGCAGTTTGGGTAAGTATGATCATCCTACT +
Preference number: 5 (lower is better)
Translates to: TLGDTPGSPNHECTI*CRGESSLGKYDHPT
Trigger: AGTAGGATGATCATACTTACCCAAACTGCTTTCCCCTCTGCAGCAGATAGTGCATTCATGATTAGGTGAACCAGGGGTGTCACCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS CCA 90 bp TCACCCTGCAATGTCCTGCAATGTTCCCTGTACAAAGTATCACTCTaGGTGACACCCCTGGTTCACCTAATCATGAATGCACTATCTGCT +
Preference number: 5 (lower is better)
Translates to: SPCNVLQCSLYKVSL*VTPLVHLIMNALSA
Trigger: AGCAGATAGTGCATTCATGATTAGGTGAACCAGGGGTGTCACCCAGAGTGATACTTTGTACAGGGAACATTGCAGGACATTGCAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS-3UTR CAA 90 bp TTTGTGGTGATTCAAATACTGCCGGTTGGAGAAGATCCTTCCACAGCCAGGGAATTCAAATACTGCCGGTaGGAGAAGATCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: FVVIQILPVGEDPSTAREFKYCR*EKILPQ
Trigger: CTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAA...TTCCCTGGCTGTGGAAGGATCTTCTCCAACCGGCAGTATTTGAATCACCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS-3UTR CAA 90 bp TTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTCTGGCTAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: FLKQTLSLLLLFSPWSLARCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...AGCCAGACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS-3UTR CAA 90 bp CTGGCATTTCTCAAGCAGACCCTCTCCTTGTTGCTCCTTTTCAGTCCCTGGAGTAGGTGTTTCTTAAAGTaGAAAGACTTCCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: LAFLKQTLSLLLLFSPWSRCFLK*KDFPQA
Trigger: AGCCTGTGGGAAGTCTTTCAACTTTAAGAAACACCT...ACTCCAGGGACTGAAAAGGAGCAACAAGGAGAGGGTCTGCTTGAGAAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000476503.5
ENST00000477070.6
ENST00000482023.5
CDS GCA 90 bp CAAAGTATCACTCTGGGTGACACCCCTGGTTCACCTAATCATGAATaGACTATCTGCTGCAGAGGGGAAAGCAGTTTGGGTAAGTATGAT +
Preference number: 5 (lower is better)
Translates to: QSITLGDTPGSPNHE*TICCRGESSLGKYD
Trigger: ATCATACTTACCCAAACTGCTTTCCCCTCTGCAGCAGATAGTGCATTCATGATTAGGTGAACCAGGGGTGTCACCCAGAGTGATACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS TCA 90 bp TGCTGCAGAGGGGAAAGCAGTTTGGGTAAGTATGATCATCCTACTTaGTGTCAGTATTCACGTACAACAGTATCTCCCCAACTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: CCRGESSLGKYDHPT*CQYSRTTVSPQLLA
Trigger: AGCAAGCAGTTGGGGAGATACTGTTGTACGTGAATACTGACATCAAGTAGGATGATCATACTTACCCAAACTGCTTTCCCCTCTGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS-3UTR CAA 90 bp TGCAGCTTCATGTGCTCCTTCAGGTGTTTCTTAAAGTTGAAAGACTTCCCACAGGCTTTCCTAATTCTCTaGGGGCCAATTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: CSFMCSFRCFLKLKDFPQAFLIL*GPICAV
Trigger: CACTGCACAAATTGGCCCCAAGAGAATTAGGAAAGC...CTGTGGGAAGTCTTTCAACTTTAAGAAACACCTGAAGGAGCACATGAAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412341.6
ENST00000463519.5
ENST00000477070.6
CDS CCA 90 bp CACCTAATCATGAATGCACTATCTGCTGCAGAGGGGAAAGCAGTTTaGGTAAGTATGATCATCCTACTTGATGTCAGTATTCACGTACAA +
Preference number: 5 (lower is better)
Translates to: HLIMNALSAAEGKAV*VSMIILLDVSIHVQ
Trigger: TTGTACGTGAATACTGACATCAAGTAGGATGATCATACTTACCCAAACTGCTTTCCCCTCTGCAGCAGATAGTGCATTCATGATTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS GCA 72 bp CCTGCGCCTCCCGGGCCTAGCGAGCAGGCCCGGAGCTaGTGGAAGACAGGGGCCCACCTCGCGCGCGCAGCG +
Preference number: 6 (lower is better)
Translates to: PAPPGPSEQARS*WKTGAHLARAA
Trigger: CGCTGCGCGCGCGAGGTGGGCCCCTGTCTTCCAGCAGCTCCGGGCCTGCTCGCTAGGCCCGGGAGGCGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000306601.9
ENST00000412341.6
ENST00000470787.6
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000497847.1
ENST00000530986.5
ENST00000533614.5
ENST00000533976.1
CDS GCA 72 bp GCTCCATGTGGCCGCCCAGGCGGATGCGGCACTTGCTaGGGCGCGCGTCCAGCTGCCGCCGCTTCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: APCGRPGGCGTC*GARPAAAASPA
Trigger: GGCGGGAGAAGCGGCGGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS TCA 72 bp CGGTGCCTCTCGGCGTCGGCTGCTGTAGCCCGGAACTaGGGCCCGCGCCCCAGAGGGAGGGGCGAGTCGGAG +
Preference number: 6 (lower is better)
Translates to: RCLSASAAVARN*GPRPRGRGESE
Trigger: CTCCGACTCGCCCCTCCCTCTGGGGCGCGGGCCTCAGTTCCGGGCTACAGCAGCCGACGCCGAGAGGCACCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534456.1
CDS GCA 72 bp GGAGGCACCACTGCTCCATGTGGCCGCCCAGGCGGATaGGGCACTTGCTGCGGCGCGCGTCCAGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: GGTTAPCGRPGG*GTCCGARPAAA
Trigger: GGCGGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS CAA 90 bp AGGAGGCACCACTGCTCCATGTGGCCGCCCAGGCGGATGCGGCACTaGCTGCGGCGCGCGTCCAGCTGCCGCCGCTTCTCCCGCCGCCTG +
Preference number: 6 (lower is better)
Translates to: RRHHCSMWPPRRMRH*LRRASSCRRFSRRL
Trigger: CAGGCGGCGGGAGAAGCGGCGGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS GCA 72 bp ACTGCTCCATGTGGCCGCCCAGGCGGATGCGGCACTTaGTGCGGCGCGCGTCCAGCTGCCGCCGCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: TAPCGRPGGCGT*CGARPAAAASP
Trigger: GGGAGAAGCGGCGGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS CAA 72 bp CACTGCTCCATGTGGCCGCCCAGGCGGATGCGGCACTaGCTGCGGCGCGCGTCCAGCTGCCGCCGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: HCSMWPPRRMRH*LRRASSCRRFS
Trigger: GGAGAAGCGGCGGCAGCTGGACGCGCGCCGCAGCAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS GCA 72 bp AGAGGCTGGAGGGTGGAAGGGACGTCTTCAGCGCCCTaGCGATCTCGGGGGTCGGGGACCCGGCTCCACCTG +
Preference number: 6 (lower is better)
Translates to: RGWRVEGTSSAP*RSRGSGTRLHL
Trigger: CAGGTGGAGCCGGGTCCCCGACCCCCGAGATCGGCAGGGCGCTGAAGACGTCCCTTCCACCCTCCAGCCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463519.5
ENST00000483223.5
ENST00000496231.1
ENST00000533976.1
CDS CAA 90 bp AGGAACTTGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCTCCTaGAGGAGGCACCACTGCTCCATGTGGCCGCCCAGGCGGATGCGG +
Preference number: 6 (lower is better)
Translates to: RNLASCECREKPSRS*RRHHCSMWPPRRMR
Trigger: CCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS GCA 72 bp AGGGAGAAGCCCAGCCGCTCCTTGAGGAGGCACCACTaGTCCATGTGGCCGCCCAGGCGGATGCGGCACTTG +
Preference number: 6 (lower is better)
Translates to: REKPSRSLRRHH*SMWPPRRMRHL
Trigger: CAAGTGCCGCATCCGCCTGGGCGGCCACATGGAGCAGTGGTGCCTCCTCAAGGAGCGGCTGGGCTTCTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306601.9
ENST00000366471.7
ENST00000412341.6
ENST00000451251.5
ENST00000463519.5
ENST00000470787.6
ENST00000483223.5
ENST00000483791.6
ENST00000495731.5
ENST00000496053.1
ENST00000496231.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533614.5
ENST00000533647.1
ENST00000533976.1
ENST00000534456.1
ENST00000534660.5
CDS CAA 72 bp GGCACCAGGCTGCACTCTCGGCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: GTRLHSRRSNRN*ASCECREKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGCCGAGAGTGCAGCCTGGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470787.6
CDS CAA 72 bp GCCCTTCTCCCGGCCCCTAACCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ALLPAPNRSNRN*ASCECREKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTAGGGGCCGGGAGAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497847.1
ENST00000530699.1
ENST00000533976.1
ENST00000534456.1
CDS CAA 90 bp CTCCCCCAAGCCCTTCTCCCGGCCCCTAACCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCTCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: LPQALLPAPNRSNRN*ASCECREKPSRSLR
Trigger: CCTCAAGGAGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTAGGGGCCGGGAGAAGGGCTTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000497847.1
ENST00000530699.1
ENST00000533976.1
ENST00000534456.1
CDS TCA 72 bp GGGGCCAGCCCTAAGGGCCGCTATTCGCTGAGACCATaGGGAGGGGAGCAGGACCCTCGGAGGCCACAAGTC +
Preference number: 6 (lower is better)
Translates to: GASPKGRYSLRP*GGEQDPRRPQV
Trigger: GACTTGTGGCCTCCGAGGGTCCTGCTCCCCTCCTCATGGTCTCAGCGAATAGCGGCCCTTAGGGCTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000463519.5
ENST00000478107.5
ENST00000483223.5
ENST00000496053.1
ENST00000496411.5
ENST00000497847.1
ENST00000528141.5
ENST00000530699.1
ENST00000530986.5
ENST00000533647.1
ENST00000534456.1
CDS CCA 72 bp GCACCAGGCTGCACTCTCGGCGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: APGCTLGGPTGT*RAASAGRSPAA
Trigger: AGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGCCGAGAGTGCAGCCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470787.6
CDS CCA 72 bp CCCTTCTCCCGGCCCCTAACCGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: PFSRPLTGPTGT*RAASAGRSPAA
Trigger: AGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTAGGGGCCGGGAGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497847.1
ENST00000530699.1
ENST00000533976.1
ENST00000534456.1
CDS CAA 72 bp CCACAAGTCACACAGGCCGTCCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: PQVTQAVRSNRN*ASCECREKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGACGGCCTGTGTGACTTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483223.5
ENST00000496053.1
ENST00000496411.5
ENST00000533647.1
CDS CCA 72 bp AAAGAGCAGCAGGACAGGCCCGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: KEQQDRPGPTGT*RAASAGRSPAA
Trigger: AGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGGCCTGTCCTGCTGCTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS CCA 72 bp CACAAGTCACACAGGCCGTCCGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: HKSHRPSGPTGT*RAASAGRSPAA
Trigger: AGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGACGGCCTGTGTGACTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483223.5
ENST00000496053.1
ENST00000496411.5
ENST00000533647.1
CDS CCA 72 bp ACCTGCACAGAGGACACAGCCGGTCCAACAGGAACTTaGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: TCTEDTAGPTGT*RAASAGRSPAA
Trigger: AGCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGCTGTGTCCTCTGTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533614.5
CDS CAA 72 bp AAAAGAGCAGCAGGACAGGCCCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: KRAAGQARSNRN*ASCECREKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGGCCTGTCCTGCTGCTCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS CAA 72 bp TACCTGCACAGAGGACACAGCCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: YLHRGHSRSNRN*ASCECREKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGCTGTGTCCTCTGTGCAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533614.5
CDS CAA 90 bp TCTTTTGGCAGCTTTCCTGGCCAGGGCCTCAGTCTGCTGGGCCGCTaGAGGGGTCCTGCTGAGCTGTGGCTGCACCCTGACTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SFGSFPGQGLSLLGR*RGPAELWLHPDFCR
Trigger: CCTGCAGAAGTCAGGGTGCAGCCACAGCTCAGCAGGACCCCTCAAGCGGCCCAGCAGACTGAGGCCCTGGCCAGGAAAGCTGCCAAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476503.5
CDS GCA 72 bp GGAGGCAGGCAGACAGAAGCAGTCAGAACAAAGGCCTaGGCCCTCCAGTCCACTGAAGTGGAGCTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: GGRQTEAVRTKA*ALQSTEVELWG
Trigger: TCCCCACAGCTCCACTTCAGTGGACTGGAGGGCGCAGGCCTTTGTTCTGACTGCTTCTGTCTGCCTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451251.5
ENST00000463519.5
ENST00000530699.1
CDS CAA 72 bp CGTCCTGGTAAAGTGAGAAACCGGTCCAACAGGAACTaGGCGAGCTGCGAGTGCAGGGAGAAGCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RPGKVRNRSNRN*ASCECREKPSR
Trigger: GCGGCTGGGCTTCTCCCTGCACTCGCAGCTCGCCAAGTTCCTGTTGGACCGGTTTCTCACTTTACCAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528141.5
ENST00000530986.5
CDS TCA 72 bp AAGGATAGCCACCTTCCACGGAGAGATGAACTGAGCTaGCCCGGCAGGCATGCTCCTCTGTCCCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: KDSHLPRRDELS*PGRHAPLSPSW
Trigger: CCAGGAAGGGGACAGAGGAGCATGCCTGCCGGGTCAGCTCAGTTCATCTCTCCGTGGAAGGTGGCTATCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS CCA 72 bp AAGGCCTGCGCCCTCCAGTCCACTGAAGTGGAGCTGTaGGGAAGGGGCGAGAGACTTTCACGGGAAATTTCA +
Preference number: 6 (lower is better)
Translates to: KACALQSTEVEL*GRGERLSREIS
Trigger: TGAAATTTCCCGTGAAAGTCTCTCGCCCCTTCCCCACAGCTCCACTTCAGTGGACTGGAGGGCGCAGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451251.5
ENST00000463519.5
ENST00000530699.1
CDS CCA 72 bp GCATGCTTGCGCTGGTGCCAGTTCAGGGAAGCCTTCTaGCGGCAGGTAAACCCGCATATCTCACACCACTGT +
Preference number: 6 (lower is better)
Translates to: ACLRWCQFREAF*RQVNPHISHHC
Trigger: ACAGTGGTGTGAGATATGCGGGTTTACCTGCCGCCAGAAGGCTTCCCTGAACTGGCACCAGCGCAAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470787.6
CDS TCA 72 bp TGGAGCCAAACCCCGTCCTTCTATGATACAGGGTGTTaGAGCTCAGCGCTACCATGTGAGTGTCGTCGGGTG +
Preference number: 6 (lower is better)
Translates to: WSQTPSFYDTGC*SSALPCECRRV
Trigger: CACCCGACGACACTCACATGGTAGCGCTGAGCTTCAACACCCTGTATCATAGAAGGACGGGGTTTGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463519.5
CDS TCA 72 bp TTCAACTGGGCTGGGGGCGGTCCACACATTTCATCTTaGATAGGGCAGCGGCCTTTACTGGTTTCTAGGGGA +
Preference number: 6 (lower is better)
Translates to: FNWAGGGPHISS*IGQRPLLVSRG
Trigger: TCCCCTAGAAACCAGTAAAGGCCGCTGCCCTATTCAAGATGAAATGTGTGGACCGCCCCCAGCCCAGTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451251.5
ENST00000463519.5
CDS TCA 72 bp GCTCGTTTCCTTGAGGCTCAGTCCTCACCTACACCATaGGTACCACACCCATCCCATCCTGACCACTCAACT +
Preference number: 6 (lower is better)
Translates to: ARFLEAQSSPTP*VPHPSHPDHST
Trigger: AGTTGAGTGGTCAGGATGGGATGGGTGTGGTACTCATGGTGTAGGTGAGGACTGAGCCTCAAGGAAACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS CCA 72 bp GGGGCGAGAGACTTTCACGGGAAATTTCAACTGGGCTaGGGGCGGTCCACACATTTCATCTTGAATAGGGCA +
Preference number: 6 (lower is better)
Translates to: GARDFHGKFQLG*GRSTHFILNRA
Trigger: TGCCCTATTCAAGATGAAATGTGTGGACCGCCCCCAGCCCAGTTGAAATTTCCCGTGAAAGTCTCTCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000451251.5
ENST00000463519.5
ENST00000530699.1
CDS GCA 72 bp ACTCTGGGTGACACCCCTGGTTCACCTAATCATGAATaGACTATCTGCTGCAGAGGGGAAAGCAGTTTGGGT +
Preference number: 6 (lower is better)
Translates to: TLGDTPGSPNHE*TICCRGESSLG
Trigger: ACCCAAACTGCTTTCCCCTCTGCAGCAGATAGTGCATTCATGATTAGGTGAACCAGGGGTGTCACCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS GCA 72 bp ACCCCTGGTTCACCTAATCATGAATGCACTATCTGCTaGAGAGGGGAAAGCAGTTTGGGTAAGTATGATCAT +
Preference number: 6 (lower is better)
Translates to: TPGSPNHECTIC*RGESSLGKYDH
Trigger: ATGATCATACTTACCCAAACTGCTTTCCCCTCTGCAGCAGATAGTGCATTCATGATTAGGTGAACCAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS GCA 72 bp ATCCTGACCACTCAACTCTCCTGTCACCCAATTCTGTaGTTTACTTCCATTATCTCACCTCCTTGTCACACT +
Preference number: 6 (lower is better)
Translates to: ILTTQLSCHPIL*FTSIISPPCHT
Trigger: AGTGTGACAAGGAGGTGAGATAATGGAAGTAAAGCACAGAATTGGGTGACAGGAGAGTTGAGTGGTCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS CCA 72 bp AATGTCCTGCAATGTTCCCTGTACAAAGTATCACTCTaGGTGACACCCCTGGTTCACCTAATCATGAATGCA +
Preference number: 6 (lower is better)
Translates to: NVLQCSLYKVSL*VTPLVHLIMNA
Trigger: TGCATTCATGATTAGGTGAACCAGGGGTGTCACCCAGAGTGATACTTTGTACAGGGAACATTGCAGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS TCA 72 bp GGGGAAAGCAGTTTGGGTAAGTATGATCATCCTACTTaGTGTCAGTATTCACGTACAACAGTATCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: GESSLGKYDHPT*CQYSRTTVSPQ
Trigger: TTGGGGAGATACTGTTGTACGTGAATACTGACATCAAGTAGGATGATCATACTTACCCAAACTGCTTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462037.6
CDS CCA 72 bp ATGAATGCACTATCTGCTGCAGAGGGGAAAGCAGTTTaGGTAAGTATGATCATCCTACTTGATGTCAGTATT +
Preference number: 6 (lower is better)
Translates to: MNALSAAEGKAV*VSMIILLDVSI
Trigger: AATACTGACATCAAGTAGGATGATCATACTTACCCAAACTGCTTTCCCCTCTGCAGCAGATAGTGCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462037.6