Pregenerated sensors for ZNF620 (Homo sapiens)
Ensembl gene IDs: ENSG00000177842Ensembl transcript IDs: ENST00000314529.10, ENST00000418905.1, ENST00000420891.5, ENST00000433723.2, ENST00000649142.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGCCTCAGGGATTCAAGTaGTTCTCCTGCCTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEPQGFK*FSCLSL Trigger: GAGGCTGAGGCAGGAGAATCACTTGAATCCCTGAGG...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCAAATGCTGCCTGCTTTaGGGTCACTTGAAACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: WLPEGMLKPNTFTSSLISKCCLL*GHLKQQ Trigger: TTGCTGTTTCAAGTGACCTCAAAGCAGGCAGCATTT...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR-3UTR CCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAGCATTTGGCTCCACATaGACAGGGCCCGTTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: DKWCLAPDSKSIYILTFAAFGST*TGPVFE Trigger: TTCAAAAACGGGCCCTGTCCATGTGGAGCCAAATGC...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCCTAGTGAAGACAAACTaGAGAATAAGTAGGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: WLPEGMLKPNTFTSSLISLVKTN*RISRVG Trigger: ACCCACCCTACTTATTCTTCAGTTTGTCTTCACTAG...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR-3UTR TCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGGTAGTGTTGCACATATaGGAAAGGATGCATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KWCLAPDSKSIYILTFAKVVLHI*ERMHGR Trigger: TCTCCCATGCATCCTTTCTCATATGTGCAACACTAC...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR-3UTR GCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGAGGTCTCTGGAAGTTTaGACCCTACTAGGAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: KWCLAPDSKSIYILTFAKRSLEV*TLLGMS Trigger: AGACATTCCTAGTAGGGTGCAAACTTCCAGAGACCT...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR GCA 72 bp | AGTCTGCCTGGCTCTGTATTATTAATCACTACTCTCTaGTTCCTGCAAAATCAAGCTGGCTGCCAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SLPGSVLLITTL*FLQNQAGCQRG Trigger: TCCCCTCTGGCAGCCAGCTTGATTTTGCAGGAAGCAGAGAGTAGTGATTAATAATACAGAGCCAGGCAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR CCA 72 bp | CAAGGACAAACACCTGGACTCAAACCAAAGTCTGCCTaGCTCTGTATTATTAATCACTACTCTCTGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: QGQTPGLKPKSA*LCIINHYSLLP Trigger: AGGAAGCAGAGAGTAGTGATTAATAATACAGAGCCAGGCAGACTTTGGTTTGAGTCCAGGTGTTTGTCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| 3UTR-3UTR CAA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGCTGAAGGCATACACATaGTCATCTGACTTTGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LLVYSLCSVAHMRKDAWELKAYT*SSDFEG Trigger: ACCTTCAAAGTCAGATGACAATGTGTATGCCTTCAG...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAGCCTCCCTGGGCTCCTaGCTCAGCCTCCCAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFAASLGS*LSLPSS Trigger: GCTACTTGGGAGGCTGAGGCAGGAGCCCAGGGAGGC...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACAC | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISGLEHG*RPSFTH Trigger: GTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACC...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGTGGCGCCAAGCGGTCTaGAACATGGCTGGCGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEWRQAV*NMAGVP Trigger: TGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCA...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCATCCTCAAAGGTCACTaGTTCCTGGCGCCAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISILKGH*FLAPSG Trigger: ACCGCTTGGCGCCAGGAACCAGTGACCTTTGAGGAT...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGGATCTCCTGACCTTGTaGTCTGCCCACCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKDLLTL*SAHLSL Trigger: GAGGCTGAGGTGGGCAGATCACAAGGTCAGGAGATC...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCACCCAGCTTCACACACTaGCTCAGGGTTCGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFAPSFTH*LRVRRS Trigger: ACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGG...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGCATGGCAGTTCCCCTTaGTCCAGCTGGGAGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKHGSSP*SSWETR Trigger: TCTGGTCTCCCAGCTGGAGCAAGGGGAACTGCCATG...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCCTACTCTCTGCTTCCTaGAAAATCAAGCTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISLLSAS*KIKLAA Trigger: GGCAGCCAGCTTGATTTTGCAGGAAGCAGAGAGTAG...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGGGCGCAGATAAAGCGTaGAAATTCCACCTGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKGADKA*KFHLPP Trigger: CGGCGGCAGGTGGAATTTCCACGCTTTATCTGCGCC...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCGCATTTGGCTCCACATaGACAGGGCCCGTTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISAFGST*TGPVFE Trigger: TTCAAAAACGGGCCCTGTCCATGTGGAGCCAAATGC...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCACCCCCACCATCAGTCTaGAGGACTCTGTTTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFAPPPSV*RTLFLW Trigger: CCAAAGAAACAGAGTCCTTCAGACTGATGGTGGGGG...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCGACTTTTCACCAGTGTaGCATTTCTCATGTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISDFSPV*HFSCRW Trigger: CCACCGACATGAGAAATGTCACACTGGTGAAAAGTC...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGCCTCAGGGATTCAAGTaGTTCTCCTGCCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKPQGFK*FSCLSL Trigger: GAGGCTGAGGCAGGAGAATCACTTGAATCCCTGAGG...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGCTCCCAAAGTCAAGGTaGTGGGAAACATTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWELPKSR*WETFPG Trigger: GCCAGGGAATGTTTCCCAGCACCTTGACTTTGGGAG...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCCTATGGATAGCCCTATaGTTGGACAGGTGTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISLWIAL*LDRCLL Trigger: CAGAAGACACCTGTCCAAGCATAGGGCTATCCATAG...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGTCACCCAGACTGGAGTaGAGTGGCATGATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWESPRLE*SGMILA Trigger: AGCCAAGATCATGCCACTGCACTCCAGTCTGGGTGA...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGAACAGGCGTGGTGAATaGGAATGCCAGGGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKNRRGE*ECQGSH Trigger: GTGGCTTCCCTGGCATTCCCATTCACCACGCCTGTT...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCACCAAAGTCAAGGTGCTaGGAAACATTCCCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFAPKSRC*ETFPGR Trigger: CCTGCCAGGGAATGTTTCCCAGCACCTTGACTTTGG...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCGTCTTAATTATCCAATaGCCTTGTGGCTGCTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISVLIIQ*PCGCSR Trigger: CCTAGAGCAGCCACAAGGTCATTGGATAATTAAGAC...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCTGGCTGAGGTATCTGTaGAATGTCTCCTCTTTGACT | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISWLRYL*NVSSLT Trigger: AGTCAAAGAGGAGACATTTCACAGATACCTCAGCCA...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCACCAGTGTGCATTCGCTaGTGGACAGTGAAACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFAPVCIR*WTVKLE Trigger: CTCAAGTTTCACTGTCCATCAGCGAATGCACACTGG...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGATGGTCTTGATCTCCTaGCCTTGTGATCTGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKMVLIS*PCDLPT Trigger: GGTGGGCAGATCACAAGGTCAGGAGATCAAGACCAT...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | ACATATGAGAAAGGATGCATGGGAGATAAAGATTTCAGATTTAAAGGGTCTGAACGTGGAAATTCCACCTaGCGCCGACACCGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: TYEKGCMGDKDFRFKGSERGNST*RRHRGK Trigger: CTTTCCCCGGTGTCGGCGGCAGGTGGAATTTCCACG...TTCAGACCCTTTAAATCTGAAATCTTTATCTCCCATGCATCCTTTCTCATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGCCTGCAAAATCAAGCTaGCTGCCAGAGGGGATGCTA | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKPAKSS*LPEGML Trigger: TAGCATCCCCTCTGGCAGCCAGCTTGATTTTGCAGG...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | ACATATGAGAAAGGATGCATGGGAGATAAAGATTTCAGATTTAAAGGGTCTGAACCAGAACAGGCGTGGTaGATGGGAATGCCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TYEKGCMGDKDFRFKGSEPEQAW*MGMPGK Trigger: CTTCCCTGGCATTCCCATTCACCACGCCTGTTCTGG...TTCAGACCCTTTAAATCTGAAATCTTTATCTCCCATGCATCCTTTCTCATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGACTTCTCTCCATTCTTaGCCTCATAGGCCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWETSLHS*PHRPHG Trigger: ACCATGAGGCCTATGAGGTCAAGAATGGAGAGAAGT...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCATGGTGCCTTGCACCTaGCTCAAAGAGTATATACAT | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISMVPCT*LKEYIH Trigger: ATGTATATACTCTTTGAGTCAGGTGCAAGGCACCAT...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | ACATATGAGAAAGGATGCATGGGAGATAAAGATTTCAGATTTAAAGGGTCTGAAAAGCGGTCTGGAACATaGCTGGCGTCCCAGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: TYEKGCMGDKDFRFKGSEKRSGT*LASQLH Trigger: GTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTT...TTCAGACCCTTTAAATCTGAAATCTTTATCTCCCATGCATCCTTTCTCATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | ACATATGAGAAAGGATGCATGGGAGATAAAGATTTCAGATTTAAAGGGTCTGAAAAGGTCACTGGTTCCTaGCGCCAAGCGGTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TYEKGCMGDKDFRFKGSEKVTGS*RQAVWN Trigger: GTTCCAGACCGCTTGGCGCCAGGAACCAGTGACCTT...TTCAGACCCTTTAAATCTGAAATCTTTATCTCCCATGCATCCTTTCTCATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGATCTTCCACACCAGCTaGAGGTTTTACCACACACTT | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEIFHTS*RFYHTL Trigger: AAGTGTGTGGTAAAACCTTCAGCTGGTGTGGAAGAT...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGGTAGTGTTGCACATATaGGAAAGGATGCATGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEVVLHI*ERMHGR Trigger: TCTCCCATGCATCCTTTCTCATATGTGCAACACTAC...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAATTTAGGAGACTTCTaGCGTACGGACTGCAATAGG | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFANLGDF*RTDCNR Trigger: CCTATTGCAGTCCGTACGTCAGAAGTCTCCTAAATT...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TGGCTGCCAGAGGGGATGCTAAAACCTAACACATTTACATCTTCCCTCATTTCCAGAGTATATACATCCTaGCTTTTGCAAAGGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: WLPEGMLKPNTFTSSLISRVYTS*LLQRHR Trigger: TCTGTGCCTTTGCAAAAGTCAGGATGTATATACTCT...GGAAATGAGGGAAGATGTAAATGTGTTAGGTTTTAGCATCCCCTCTGGCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGAAATGCTGCCTGCTTTaGGGTCACTTGAAACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEKCCLL*GHLKQQ Trigger: TTGCTGTTTCAAGTGACCTCAAAGCAGGCAGCATTT...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAGAATGTCTTCCAAGATaGATTTGGCTCCACATGGAC | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFAECLPR*IWLHMD Trigger: GTCCATGTGGAGCCAAATGCATCTTGGAAGACATTC...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | ACATATGAGAAAGGATGCATGGGAGATAAAGATTTCAGATTTAAAGGGTCTGAACGTGGTGAATGGGAATaGCAGGGAAGCCACATTTGC | + |
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Preference number: 4 (lower is better) Translates to: TYEKGCMGDKDFRFKGSERGEWE*QGSHIC Trigger: GCAAATGTGGCTTCCCTGGCATTCCCATTCACCACG...TTCAGACCCTTTAAATCTGAAATCTTTATCTCCCATGCATCCTTTCTCATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR TCA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGCCACTAGGATTTGTCTaGTTTGTAGTGAGTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: KWCLAPDSKSIYILTFAKPLGFV*FVVSCV Trigger: CACACAACTCACTACAAATCAGACAAATCCTAGTGG...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGATGTCGGTGGAAGTCTaGCATTTGAATGAAATATCT | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEMSVEV*HLNEIS Trigger: AGATATTTCATTCAAATGGCAGACTTCCACCGACAT...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAACCAAAGTCTGCCTaGCTCTGTATTATTAATCAC | + |
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Preference number: 4 (lower is better) Translates to: DKWCLAPDSKSIYILTFAKPKSA*LCIINH Trigger: GTGATTAATAATACAGAGCCAGGCAGACTTTGGTTT...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CCA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGATGAGAAAGGATGCATaGGAGATAAAGATTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEMRKDA*EIKISD Trigger: ATCTGAAATCTTTATCTCCCATGCATCCTTTCTCAT...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR GCA 90 bp | ACATATGAGAAAGGATGCATGGGAGATAAAGATTTCAGATTTAAAGGGTCTGAATTAATCACTACTCTCTaGTTCCTGCAAAATCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: TYEKGCMGDKDFRFKGSELITTL*FLQNQA Trigger: AGCTTGATTTTGCAGGAAGCAGAGAGTAGTGATTAA...TTCAGACCCTTTAAATCTGAAATCTTTATCTCCCATGCATCCTTTCTCATATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS TCA 90 bp | GCGGCGGCGCGGGCCCCTCGGCGACCTCTGCAAGGGCCCAAAGCCTaGCCTCCAGAACAGGTAGCCGAGTCAGGGAAGCCCGGGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: AAARAPRRPLQGPKA*PPEQVAESGKPGKL Trigger: GAGTTTCCCGGGCTTCCCTGACTCGGCTACCTGTTCTGGAGGTCAGGCTTTGGGCCCTTGCAGAGGTCGCCGAGGGGCCCGCGCCGCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649142.1 |
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| CDS GCA 90 bp | GAATCCCGCGCGGCGCAGGCGCAGATAAAGCGTGGAAATTCCACCTaGCGCCGACACCGGGGAAAGCTTGAGACCCTCCGCCGGAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: ESRAAQAQIKRGNST*RRHRGKLETLRRKC Trigger: GCACTTCCGGCGGAGGGTCTCAAGCTTTCCCCGGTGTCGGCGGCAGGTGGAATTTCCACGCTTTATCTGCGCCTGCGCCGCGCGGGATTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420891.5 |
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| CDS GCA 90 bp | GCGCCAAGCGGTCTGGAACATGGCTGGCGTCCCAGCTTCACACACTaGCTCAGGGTTCGGAGAAGTGAAACGCGACCCGAGGACATCAGG | + |
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Preference number: 5 (lower is better) Translates to: APSGLEHGWRPSFTH*LRVRRSETRPEDIR Trigger: CCTGATGTCCTCGGGTCGCGTTTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649142.1 |
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| CDS GCA 90 bp | GCGCCAAGCGGTCTGGAACATGGCTGGCGTCCCAGCTTCACACACTaGCTCAGGGTTCGGAGAAGTGAAACCGGACCGCGAACCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: APSGLEHGWRPSFTH*LRVRRSETGPRTSS Trigger: TGAAGAGGTTCGCGGTCCGGTTTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000314529.10 ENST00000418905.1 ENST00000433723.2 |
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| CDS GCA 90 bp | GCGCCAAGCGGTCTGGAACATGGCTGGCGTCCCAGCTTCACACACTaGCTCAGGGTTCGGAGAAGTGAAACTCTTCAGCTCGGACCGCGA | + |
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Preference number: 5 (lower is better) Translates to: APSGLEHGWRPSFTH*LRVRRSETLQLGPR Trigger: TCGCGGTCCGAGCTGAAGAGTTTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420891.5 |
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| CDS CCA 90 bp | CAGTTCTGGCCTCATCCCCTGGCGCCAAGCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACACTGCCTCAGGGTTCGGAGAAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: QFWPHPLAPSGLEHG*RPSFTHCLRVRRSE Trigger: TTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGGGGATGAGGCCAGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418905.1 |
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| CDS CCA 90 bp | GCCCAATTTGAGGTCAGCCTGGCGCCAAGCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACACTGCCTCAGGGTTCGGAGAAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: AQFEVSLAPSGLEHG*RPSFTHCLRVRRSE Trigger: TTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGGCTGACCTCAAATTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649142.1 |
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| CDS CCA 90 bp | GACAGAGTAAGATTGTCTCTGGCGCCAAGCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACACTGCCTCAGGGTTCGGAGAAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: DRVRLSLAPSGLEHG*RPSFTHCLRVRRSE Trigger: TTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGAGACAATCTTACTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433723.2 |
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| CDS-3UTR CAA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGCCATGGCAGTTCCCCTaGCTCCAGCTGGGAGACCAG | + |
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Preference number: 5 (lower is better) Translates to: KWCLAPDSKSIYILTFAKPWQFP*LQLGDQ Trigger: CTGGTCTCCCAGCTGGAGCAAGGGGAACTGCCATGG...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CAA 90 bp | AAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCAAAGTGGATAGCCCTATGCTaGGACAGGTGTCTTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KWCLAPDSKSIYILTFAKWIALC*DRCLLS Trigger: ACTCAGAAGACACCTGTCCAAGCATAGGGCTATCCA...CTTTGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CAA 90 bp | TTACTGGTTTACTCCTTGTGTAGTGTTGCACATATGAGAAAGGATGCATGGGAGAAGACAAATGGTGCCTaGCACCTGACTCAAAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: LLVYSLCSVAHMRKDAWEKTNGA*HLTQRV Trigger: TACTCTTTGAGTCAGGTGCAAGGCACCATTTGTCTT...CTCCCATGCATCCTTTCTCATATGTGCAACACTACACAAGGAGTAAACCAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS-3UTR CAA 90 bp | GACAAATGGTGCCTTGCACCTGACTCAAAGAGTATATACATCCTGACTTTTGCACTGAAGGCATACACATaGTCATCTGACTTTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: DKWCLAPDSKSIYILTFALKAYT*SSDFEG Trigger: ACCTTCAAAGTCAGATGACAATGTGTATGCCTTCAG...TGCAAAAGTCAGGATGTATATACTCTTTGAGTCAGGTGCAAGGCACCATTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000314529.10 |
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| CDS CCA 72 bp | CCTCGGAGCAGGAAGGTCGAGGGCGTCTCTGAAGACTaGGGACTGGGCCCAGGCTCTGGCGGCGGCGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PRSRKVEGVSED*GLGPGSGGGAG Trigger: GCCCGCGCCGCCGCCAGAGCCTGGGCCCAGTCCCCAGTCTTCAGAGACGCCCTCGACCTTCCTGCTCCGAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649142.1 |
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| CDS CCA 72 bp | CCGCGAATCCCGCGCGGCGCAGGCGCAGATAAAGCGTaGAAATTCCACCTGCCGCCGACACCGGGGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: PRIPRGAGADKA*KFHLPPTPGKA Trigger: AGCTTTCCCCGGTGTCGGCGGCAGGTGGAATTTCCACGCTTTATCTGCGCCTGCGCCGCGCGGGATTCGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314529.10 ENST00000418905.1 ENST00000420891.5 |
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| CDS GCA 72 bp | GCGGCGCAGGCGCAGATAAAGCGTGGAAATTCCACCTaGCGCCGACACCGGGGAAAGCTTGAGACCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: AAQAQIKRGNST*RRHRGKLETLR Trigger: GCGGAGGGTCTCAAGCTTTCCCCGGTGTCGGCGGCAGGTGGAATTTCCACGCTTTATCTGCGCCTGCGCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420891.5 |
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| CDS CCA 72 bp | CCTCATCCCCTGGCGCCAAGCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACACTGCCTCAGGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: PHPLAPSGLEHG*RPSFTHCLRVR Trigger: CCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGGGGATGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418905.1 |
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| CDS CCA 72 bp | GAGGTCAGCCTGGCGCCAAGCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACACTGCCTCAGGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: EVSLAPSGLEHG*RPSFTHCLRVR Trigger: CCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGGCTGACCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649142.1 |
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| CDS CCA 72 bp | CACTGGTTCCTGGCGCCAAGCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACACTGCCTCAGGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: HWFLAPSGLEHG*RPSFTHCLRVR Trigger: CCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGGAACCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000314529.10 ENST00000420891.5 |
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| CDS TCA 72 bp | TGGAAATTCCACCTGCCGCCGACACCGGGGAAAGCTTaGGACCCTCCGCCGGAAGTGCGTTTTCCATGCCCC | + |
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Preference number: 6 (lower is better) Translates to: WKFHLPPTPGKA*DPPPEVRFPCP Trigger: GGGGCATGGAAAACGCACTTCCGGCGGAGGGTCTCAAGCTTTCCCCGGTGTCGGCGGCAGGTGGAATTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420891.5 |
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| CDS CCA 72 bp | GAGCCCAATTTGAGGTCAGCCTGGCGCCAAGCGGTCTaGAACATGGCTGGCGTCCCAGCTTCACACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: EPNLRSAWRQAV*NMAGVPASHTA Trigger: GGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGGCTGACCTCAAATTGGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649142.1 |
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| CDS CAA 72 bp | GTGGAAATTCCACCTGCCGCCGACACCGGGGAAAGCTaGAGACCCTCCGCCGGAAGTGCGTTTTCCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: VEIPPAADTGES*RPSAGSAFSMP Trigger: GGGCATGGAAAACGCACTTCCGGCGGAGGGTCTCAAGCTTTCCCCGGTGTCGGCGGCAGGTGGAATTTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420891.5 |
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| CDS GCA 72 bp | GGTCTGGAACATGGCTGGCGTCCCAGCTTCACACACTaGCTCAGGGTTCGGAGAAGTGAAACCGGACCGCGA | + |
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Preference number: 6 (lower is better) Translates to: GLEHGWRPSFTH*LRVRRSETGPR Trigger: TCGCGGTCCGGTTTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000314529.10 ENST00000418905.1 ENST00000433723.2 |
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| CDS GCA 72 bp | GGTCTGGAACATGGCTGGCGTCCCAGCTTCACACACTaGCTCAGGGTTCGGAGAAGTGAAACGCGACCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GLEHGWRPSFTH*LRVRRSETRPE Trigger: CTCGGGTCGCGTTTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649142.1 |
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| CDS CCA 72 bp | AGATTGTCTCTGGCGCCAAGCGGTCTGGAACATGGCTaGCGTCCCAGCTTCACACACTGCCTCAGGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: RLSLAPSGLEHG*RPSFTHCLRVR Trigger: CCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACCGCTTGGCGCCAGAGACAATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433723.2 |
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| CDS GCA 72 bp | GGTCTGGAACATGGCTGGCGTCCCAGCTTCACACACTaGCTCAGGGTTCGGAGAAGTGAAACTCTTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GLEHGWRPSFTH*LRVRRSETLQL Trigger: GAGCTGAAGAGTTTCACTTCTCCGAACCCTGAGGCAGTGTGTGAAGCTGGGACGCCAGCCATGTTCCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420891.5 |
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