RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF618 (Homo sapiens)

Ensembl gene IDs: ENSG00000157657

Ensembl transcript IDs: ENST00000288466.11, ENST00000374124.4, ENST00000374126.9, ENST00000452710.5, ENST00000470105.1, ENST00000481558.1, ENST00000615615.4

Found 1039 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCACAAGGCACCATGCTCACTGCCGTCCTGGAAGTCGGAGGTGTaGGTGAGGACCCCGAGGGCTGTGGGCAGCAGAGCTCCTGGAAGC +
Preference number: 1 (lower is better)
Translates to: GHKAPCSLPSWKSEV*VRTPRAVGSRAPGS
Trigger: GCTTCCAGGAGCTCTGCTGCCCACAGCCCTCGGGGTCCTCACTCACACCTCCGACTTCCAGGACGGCAGTGAGCATGGTGCCTTGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp TGGGAAGTGAGGAGAGGCTGTGGCAGGTCTGAGGTGTGGTGGATGTaGCTATGGGCTGACTTCGGAGTCGCTGTGGACTGCCAGGGTCCG +
Preference number: 1 (lower is better)
Translates to: WEVRRGCGRSEVWWM*LWADFGVAVDCQGP
Trigger: CGGACCCTGGCAGTCCACAGCGACTCCGAAGTCAGCCCATAGTCACATCCACCACACCTCAGACCTGCCACAGCCTCTCCTCACTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp GGCATCCACCCGTGGCCCAGATGGTACCAATGCTCTTGGTGGACCTaGGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGC +
Preference number: 1 (lower is better)
Translates to: GIHPWPRWYQCSWWT*DSLGYSTPRDNPQR
Trigger: GCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAGGTCCACCAAGAGCATTGGTACCATCTGGGCCACGGGTGGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp CTGAGGTGTGGTGGATGTGACTATGGGCTGACTTCGGAGTCGCTGTaGACTGCCAGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACT +
Preference number: 1 (lower is better)
Translates to: LRCGGCDYGLTSESL*TARVREGVSSVMHT
Trigger: AGTGTGCATCACACTACTCACCCCCTCCCGGACCCTGGCAGTCCACAGCGACTCCGAAGTCAGCCCATAGTCACATCCACCACACCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp GTCGAACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTaGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGAAGTCGGAG +
Preference number: 1 (lower is better)
Translates to: VEHGQTPSHPRNINC*GHKAPCSLPSWKSE
Trigger: CTCCGACTTCCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGTTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp AGTGTGAAGCTGCCAAGCAGGATGGTGGCAAAGCTTCCTCACTGGTaGTGCGGCAGGTGGCCTCTGTGCAGCGAACCTCCAGAGATGAAG +
Preference number: 1 (lower is better)
Translates to: SVKLPSRMVAKLPHW*CGRWPLCSEPPEMK
Trigger: CTTCATCTCTGGAGGTTCGCTGCACAGAGGCCACCTGCCGCATCACCAGTGAGGAAGCTTTGCCACCATCCTGCTTGGCAGCTTCACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp TCCCTCTTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATaGACACCCGTCCAAGCACAGGCGTATGTACACGCACCAGGGTCG +
Preference number: 1 (lower is better)
Translates to: SLFPNRSAFLTRPVQ*TPVQAQAYVHAPGS
Trigger: CGACCCTGGTGCGTGTACATACGCCTGTGCTTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAAGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp AGAGATAGAGGCATTGCCGCTGTTGCCAAGGCGAGGGCAAAGCTATaGACTTCGGGCGGCTCACTGGGACACCTCCTCTTCCAGCATATC +
Preference number: 1 (lower is better)
Translates to: RDRGIAAVAKARAKL*TSGGSLGHLLFQHI
Trigger: GATATGCTGGAAGAGGAGGTGTCCCAGTGAGCCGCCCGAAGTTCATAGCTTTGCCCTCGCCTTGGCAACAGCGGCAATGCCTCTATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp CCTACCACACAAAGTAGGCAGCTCCTATCCTTGTGTGGGTCAAAGTaGCGGTCACTGTCCCTTCCCCAGCAGTCAAGCAACGCTAGAGGG +
Preference number: 1 (lower is better)
Translates to: PTTQSRQLLSLCGSK*RSLSLPQQSSNARG
Trigger: CCCTCTAGCGTTGCTTGACTGCTGGGGAAGGGACAGTGACCGGCACTTTGACCCACACAAGGATAGGAGCTGCCTACTTTGTGTGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp CGTGGCCCAGATGGTACCAATGCTCTTGGTGGACCTGAGATTCCTTaGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTT +
Preference number: 1 (lower is better)
Translates to: RGPDGTNALGGPEIP*ATPLRGTTLNAAVL
Trigger: AAGAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAGGTCCACCAAGAGCATTGGTACCATCTGGGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp CCACCAGCACTTCATTCACTGAGAGGTGTGGTGGGGGTGGAGTGCTaGTTTGTGACAGAACCGCCTCTTGTGAAGGGAATGGGGTGTCAC +
Preference number: 1 (lower is better)
Translates to: PPALHSLRGVVGVEC*FVTEPPLVKGMGCH
Trigger: GTGACACCCCATTCCCTTCACAAGAGGCGGTTCTGTCACAAATCAGCACTCCACCCCCACCACACCTCTCAGTGAATGAAGTGCTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp GTAGAAACGGCCCAAATTCCTGGTCCCAGATCCCCCAAAGGCTTGTaGTGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGAC +
Preference number: 1 (lower is better)
Translates to: VETAQIPGPRSPKGL*WKDLQWTQNWEADD
Trigger: GTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGCCTTTGGGGGATCTGGGACCAGGAATTTGGGCCGTTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp GCTGCCCCGGGACACCCAAGGGGTATCTCAAAGGCAGCAGCTCAATaGCCTGAAGGTGAACAAGAAACAAAGTCCAGTGCAGAAACCGTC +
Preference number: 1 (lower is better)
Translates to: AAPGHPRGISKAAAQ*PEGEQETKSSAETV
Trigger: GACGGTTTCTGCACTGGACTTTGTTTCTTGTTCACCTTCAGGGCATTGAGCTGCTGCCTTTGAGATACCCCTTGGGTGTCCCGGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp AGCACAACTTTGCTCCAAGTAGAGGGAGGATGGGCTCCCAGGCTCTaGTCTCACCTACCACACAAAGTAGGCAGCTCCTATCCTTGTGTG +
Preference number: 1 (lower is better)
Translates to: STTLLQVEGGWAPRL*SHLPHKVGSSYPCV
Trigger: CACACAAGGATAGGAGCTGCCTACTTTGTGTGGTAGGTGAGAGCAGAGCCTGGGAGCCCATCCTCCCTCTACTTGGAGCAAAGTTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTaGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: RCLFPACTPGGFLES*RLTASHLCHCTALL
Trigger: CAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp AAAGGAGGTGAAACATCTCCCTCTTTCCCAATCGCTCAGCTTTCCTaGCACGCCCAGTTCAATGCACACCCGTCCAAGCACAGGCGTATG +
Preference number: 1 (lower is better)
Translates to: KGGETSPSFPIAQLS*HAQFNAHPSKHRRM
Trigger: CATACGCCTGTGCTTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAAGAGGGAGATGTTTCACCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp TCAAAACAAAGGCCATTTCTGTCCTGGGGACCACATGGCTCAAGGTaGGTAGTCTCCACATCAGCAGGCCACCACCTTAGGCTGCTGAGA +
Preference number: 1 (lower is better)
Translates to: SKQRPFLSWGPHGSR*VVSTSAGHHLRLLR
Trigger: TCTCAGCAGCCTAAGGTGGTGGCCTGCTGATGTGGAGACTACTCACCTTGAGCCATGTGGTCCCCAGGACAGAAATGGCCTTTGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp CTGAAAGAGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTaGATCCTGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGC +
Preference number: 1 (lower is better)
Translates to: LKEMSLPSLHTWWLP*ILETHSFSSVSLHC
Trigger: GCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCTCTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp GGCTTCCTTGAATCCTGGAGACTCACAGCTTCTCATCTGTGTCACTaGACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTT +
Preference number: 1 (lower is better)
Translates to: GFLESWRLTASHLCH*TALLSLPGNPGTLF
Trigger: AAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCAGGATTCAAGGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp GGAGAGAAAAGCCTGAAGACATCTTTCACAGCATCGAGTCGAACATaGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCA +
Preference number: 1 (lower is better)
Translates to: GEKSLKTSFTASSRT*PNTIPPSEHQLLGP
Trigger: TGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTCAGGCTTTTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp ACCGGGGTGAAGGACAGAGAGCGTCAAGTCACTTCAGATCTCAGCTaGCTGAACATTTCACAACATCAGCTTTCTGCCAATCTGCACACC +
Preference number: 1 (lower is better)
Translates to: TGVKDRERQVTSDLS*LNISQHQLSANLHT
Trigger: GGTGTGCAGATTGGCAGAAAGCTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGTGACTTGACGCTCTCTGTCCTTCACCCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp GACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTaGCAGGAAACCCTGGTACCCTTTTTCCAGCCAAAAACCAATCCT +
Preference number: 1 (lower is better)
Translates to: DSQLLICVTALLSCP*QETLVPFFQPKTNP
Trigger: AGGATTGGTTTTTGGCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp TCCCCAACGCCTGGTCTCCAAATAGCACAGCCAAGAACCTGGTCTTaGCCGTTCGAATATGTGAAAACTGAACTGTACAGGGAAGGCCAA +
Preference number: 1 (lower is better)
Translates to: SPTPGLQIAQPRTWS*PFEYVKTELYREGQ
Trigger: TTGGCCTTCCCTGTACAGTTCAGTTTTCACATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGCTATTTGGAGACCAGGCGTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp AACTTTACTCCCTGCTCCTGTCATGGACCCAGGGGGAGAGGGCTGTaGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGAT +
Preference number: 1 (lower is better)
Translates to: NFTPCSCHGPRGRGL*YSAFCSRGISQLSD
Trigger: ATCACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCCCCTGGGTCCATGACAGGAGCAGGGAGTAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp TGGCCCCCAAACACTATGTTCCAGGTCCATGATCCTAAGCCTTCATaGGGTTTGCAATCAACTTTACTCCCTGCTCCTGTCATGGACCCA +
Preference number: 1 (lower is better)
Translates to: WPPNTMFQVHDPKPS*GLQSTLLPAPVMDP
Trigger: TGGGTCCATGACAGGAGCAGGGAGTAAAGTTGATTGCAAACCTCATGAAGGCTTAGGATCATGGACCTGGAACATAGTGTTTGGGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 90 bp ATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTaGGTACCCAGTGGCATTCACATCAAACCTGCAGAGGCAAGCCAA +
Preference number: 1 (lower is better)
Translates to: ILLSNWTRQPQRTAF*VPSGIHIKPAEASQ
Trigger: TTGGCTTGCCTCTGCAGGTTTGATGTGAATGCCACTGGGTACTCAGAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp GAATCCTCCCCAACGCCTGGTCTCCAAATAGCACAGCCAAGAACCTaGTCTTGGCCGTTCGAATATGTGAAAACTGAACTGTACAGGGAA +
Preference number: 1 (lower is better)
Translates to: ESSPTPGLQIAQPRT*SWPFEYVKTELYRE
Trigger: TTCCCTGTACAGTTCAGTTTTCACATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGCTATTTGGAGACCAGGCGTTGGGGAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp TGTTTTGTTTCCTGGTTACTAAATGCCATTAGAGGGAGGCCTGGCTaGCTGAGCCAGGAATCGGGAAGTGGAGAACTGTGCCAGAACAAA +
Preference number: 1 (lower is better)
Translates to: CFVSWLLNAIRGRPG*LSQESGSGELCQNK
Trigger: TTTGTTCTGGCACAGTTCTCCACTTCCCGATTCCTGGCTCAGCCAGCCAGGCCTCCCTCTAATGGCATTTAGTAACCAGGAAACAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 90 bp TCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTaGTACCCTTTTTCCAGCCAAAAACCAATCCTCAGATGTCAAGTG +
Preference number: 1 (lower is better)
Translates to: SSVSLHCSPVLARKP*YPFSSQKPILRCQV
Trigger: CACTTGACATCTGAGGATTGGTTTTTGGCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp TGGCCTCTGTGCAGCGAACCTCCAGAGATGAAGTGCAGGCAGTTTTaGTCAGGTGGCATGTGTTTTGTTTCCTGGTTACTAAATGCCATT +
Preference number: 1 (lower is better)
Translates to: WPLCSEPPEMKCRQF*SGGMCFVSWLLNAI
Trigger: AATGGCATTTAGTAACCAGGAAACAAAACACATGCCACCTGAGCAAAACTGCCTGCACTTCATCTCTGGAGGTTCGCTGCACAGAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp CACTTCAGATCTCAGCTGCCTGAACATTTCACAACATCAGCTTTCTaGCAATCTGCACACCTGAAAGCGGAGTCTTCTAAAGCCCCCTTA +
Preference number: 1 (lower is better)
Translates to: HFRSQLPEHFTTSAF*QSAHLKAESSKAPL
Trigger: TAAGGGGGCTTTAGAAGACTCCGCTTTCAGGTGTGCAGATTGGCAGAAAGCTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp TCCTGGAGGACAGACATCCCATGCTTCAAAGAGAAGAATGCTGAGTaGTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAA +
Preference number: 1 (lower is better)
Translates to: SWRTDIPCFKEKNAE*SKCTSGLSPMAFQE
Trigger: TTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGCACTCAGCATTCTTCTCTTTGAAGCATGGGATGTCTGTCCTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 90 bp ACAGACATCCCATGCTTCAAAGAGAAGAATGCTGAGTGCTCTAAATaGACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATG +
Preference number: 1 (lower is better)
Translates to: TDIPCFKEKNAECSK*TSGLSPMAFQESEM
Trigger: CATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGCACTCAGCATTCTTCTCTTTGAAGCATGGGATGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGATCCTCCCCAACGCCTaGTCTCCAAATAGCACAGCC +
Preference number: 2 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRILPNA*SPNSTA
Trigger: GGCTGTGCTATTTGGAGACCAGGCGTTGGGGAGGAT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGGGCAGCAGAGCTCCTaGAAGCCTCAGGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFGQQSS*KPQGPG
Trigger: CCCAGGACCCTGAGGCTTCCAGGAGCTCTGCTGCCC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCAGCTGTGGAACCCGTaGATCCTCCCCAACGCCTGG +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFQLWNP*ILPNAW
Trigger: CCAGGCGTTGGGGAGGATTCACGGGTTCCACAGCTG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCACTTCGGAGTCGCTGTaGACTGCCAGGGTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGTSESL*TARVRE
Trigger: CTCCCGGACCCTGGCAGTCCACAGCGACTCCGAAGT...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGGGCAGCAGAGCTCCTaGAAGCCTCAGGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLGQQSS*KPQGPG
Trigger: CCCAGGACCCTGAGGCTTCCAGGAGCTCTGCTGCCC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGGACCCCGAGGGCTGTaGGCAGCAGAGCTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRGPRGL*AAELLE
Trigger: TTCCAGGAGCTCTGCTGCCCACAGCCCTCGGGGTCC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGAGCTTTCTGCCAATCTaGACACCTGAAAGCGGAGTC +
Preference number: 2 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRSFLPI*TPESGV
Trigger: GACTCCGCTTTCAGGTGTGCAGATTGGCAGAAAGCT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGAACTCCCAAACCACTaGTTCCCCTACGGCCACCAA +
Preference number: 2 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWELPNH*FPYGHQ
Trigger: TTGGTGGCCGTAGGGGAAGCAGTGGTTTGGGAGTTC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGGAGTCGCTGTGGACTaGCAGGGTCCGGGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLGVAVD*QGPGGG
Trigger: ACCCCCTCCCGGACCCTGGCAGTCCACAGCGACTCC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGGCACCATGCTCACTaGCGTCCTGGAAGTCGGAGG +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRHHAH*RPGSRR
Trigger: CCTCCGACTTCCAGGACGGCAGTGAGCATGGTGCCT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp AGTCGAACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTaGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGAAGTCGGA +
Preference number: 2 (lower is better)
Translates to: SRTWPNTIPPSEHQL*GPQGTMLTAVLEVG
Trigger: TCCGACTTCCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGTTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCAGCTGTGGAACCCGTaGATCCTCCCCAACGCCTGG +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLQLWNP*ILPNAW
Trigger: CCAGGCGTTGGGGAGGATTCACGGGTTCCACAGCTG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAGTCGGAGGTGTGAGTaGGGACCCCGAGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSRRCE*GPRGLW
Trigger: CCACAGCCCTCGGGGTCCTCACTCACACCTCCGACT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGACGTGTTCAGACACGTaGACACACGTGTGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWTCSDT*THVWLC
Trigger: ACACAGCCACACGTGTGTGCACGTGTCTGAACACGT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGAAGGCAGCAGCTCAATaGCCTGAAGGTGAACAAGAA +
Preference number: 2 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRKAAAQ*PEGEQE
Trigger: TTCTTGTTCACCTTCAGGGCATTGAGCTGCTGCCTT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGGCAGGTGGCCTCTGTaGAGCGAACCTCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLGRWPL*SEPPEM
Trigger: CATCTCTGGAGGTTCGCTGCACAGAGGCCACCTGCC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGACTTCGGAGTCGCTGTaGACTGCCAGGGTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLTSESL*TARVRE
Trigger: CTCCCGGACCCTGGCAGTCCACAGCGACTCCGAAGT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCAAGTAGAGGGAGGATaGGCTCCCAGGCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFQVEGG*APRLCS
Trigger: AGAGCAGAGCCTGGGAGCCCATCCTCCCTCTACTTG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp CAGGCTCTGCTCTCACCTACCACACAAAGTAGGCAGCTCCTATCCTaGTGTGGGTCAAAGTGCCGGTCACTGTCCCTTCCCCAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: QALLSPTTQSRQLLS*CGSKCRSLSLPQQS
Trigger: TGACTGCTGGGGAAGGGACAGTGACCGGCACTTTGACCCACACAAGGATAGGAGCTGCCTACTTTGTGTGGTAGGTGAGAGCAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp CCAGAACAAAGGCATCCACCCGTGGCCCAGATGGTACCAATGCTCTaGGTGGACCTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAA +
Preference number: 2 (lower is better)
Translates to: PEQRHPPVAQMVPML*VDLRFLGLLHSEGQ
Trigger: TTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAGGTCCACCAAGAGCATTGGTACCATCTGGGCCACGGGTGGATGCCTTTGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATGGAAGTCGGAGGTGTaGGTGAGGACCCCGAGGGCT +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKWKSEV*VRTPRA
Trigger: AGCCCTCGGGGTCCTCACTCACACCTCCGACTTCCA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCAGAACCGCCTCTTGTaGAGGGAATGGGGTGTCACC +
Preference number: 2 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRQNRLL*REWGVT
Trigger: GGTGACACCCCATTCCCTTCACAAGAGGCGGTTCTG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGTGGGGGTGGAGTGCTaGTTTGTGACAGAACCGCCT +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSVGVEC*FVTEPP
Trigger: AGGCGGTTCTGTCACAAATCAGCACTCCACCCCCAC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAAAGCTTCCTCACTGGTaGTGCGGCAGGTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPKLPHW*CGRWPL
Trigger: CAGAGGCCACCTGCCGCATCACCAGTGAGGAAGCTT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGGAGTCGCTGTGGACTaGCAGGGTCCGGGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFGVAVD*QGPGGG
Trigger: ACCCCCTCCCGGACCCTGGCAGTCCACAGCGACTCC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAGGCACCATGCTCACTaGCGTCCTGGAAGTCGGAGG +
Preference number: 2 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGRHHAH*RPGSRR
Trigger: CCTCCGACTTCCAGGACGGCAGTGAGCATGGTGCCT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCCAAGAACCTGGTCTTaGCCGTTCGAATATGTGAAA +
Preference number: 2 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRPRTWS*PFEYVK
Trigger: TTTCACATATTCGAACGGCCAAGACCAGGTTCTTGG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGCACAGCCAAGAACCTaGTCTTGGCCGTTCGAATAT +
Preference number: 2 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWAQPRT*SWPFEY
Trigger: ATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGGACCTGAGATTCCTTaGGCTACTCCACTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSGPEIP*ATPLRG
Trigger: CCCTCGGAGTGGAGTAGCCCAAGGAATCTCAGGTCC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCACCCGTGGCCCAGATaGTACCAATGCTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLHPWPR*YQCSWW
Trigger: CCACCAAGAGCATTGGTACCATCTGGGCCACGGGTG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp CTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTaGGCTTGGGCTTTGTTGGTGAAGCAACTGACCTCAGATGAGGGA +
Preference number: 2 (lower is better)
Translates to: LGLLHSEGQPSTLQF*AWALLVKQLTSDEG
Trigger: TCCCTCATCTGAGGTCAGTTGCTTCACCAACAAAGCCCAAGCCAAGAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAAAGGAGGACCGGGGTaGAGGACAGAGAGCGTCAAG +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLKGGPG*RTESVK
Trigger: CTTGACGCTCTCTGTCCTTCACCCCGGTCCTCCTTT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCAGAAACCGTCCATCTaGTGCAGTGTGGAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFQKPSI*CSVESP
Trigger: TGGACTCTCCACACTGCATCAGATGGACGGTTTCTG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGTTAAGTCTCCTTTCCTaGTTTGGGGAGATAGATAGG +
Preference number: 2 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRLSLLS*FGEIDR
Trigger: CCTATCTATCTCCCCAAATCAGGAAAGGAGACTTAA...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGATGTGACTATGGGCTaGCTTCGGAGTCGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSDVTMG*LRSRCG
Trigger: TCCACAGCGACTCCGAAGTCAGCCCATAGTCACATC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGAGGTGTGGTGGATGTaGCTATGGGCTGACTTCGGA +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLEVWWM*LWADFG
Trigger: TCCGAAGTCAGCCCATAGTCACATCCACCACACCTC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTTGGAAGTCGGAGGTGTaGGTGAGGACCCCGAGGGCT +
Preference number: 2 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSWKSEV*VRTPRA
Trigger: AGCCCTCGGGGTCCTCACTCACACCTCCGACTTCCA...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAGCCTTTCCTGTTGGTaGCACCAGTTTCCGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSSLSCW*HQFPEG
Trigger: TCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTGCTCTTGGTGGACCTaGGATTCCTTGGGCTACTCC +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLCSWWT*DSLGYS
Trigger: GGAGTAGCCCAAGGAATCTCAGGTCCACCAAGAGCA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCATTTCTCCCTGTTCCTaGTCCAGTGTGGATGGCGGC +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSISPCS*SSVDGG
Trigger: GCCGCCATCCACACTGGAGCAGGAACAGGGAGAAAT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCATCCTCCCCAACGCCTaGTCTCCAAATAGCACAGCC +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLILPNA*SPNSTA
Trigger: GGCTGTGCTATTTGGAGACCAGGCGTTGGGGAGGAT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGCATCGAGTCGAACATaGCCAAACACCATCCCACCC +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSASSRT*PNTIPP
Trigger: GGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAAAGGGGCCAGTGGCTaGACCTGTGAGATCTTTGGG +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSKGASG*TCEIFG
Trigger: CCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCAAAGGCATCCACCCGTaGCCCAGATGGTACCAATGC +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLKGIHP*PRWYQC
Trigger: GCATTGGTACCATCTGGGCCACGGGTGGATGCCTTT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCATCGCTCAGCTTTCCTaGCACGCCCAGTTCAATGCA +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLIAQLS*HAQFNA
Trigger: TGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGAT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACAGCACTTCATTCACTaGGAGGTGTGGTGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKQHFIH*EVWWGW
Trigger: CCACCCCCACCACACCTCTCAGTGAATGAAGTGCTG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCTGGGTGAGTTCTCATaGGGCAAAGTGTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLGEFS*GKVCRL
Trigger: AAGCCTGCACACTTTGCCTCATGAGAACTCACCCAG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGCAACTGACCTCAGATaGGGGAGAAAAACTTGCCAG +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFATDLR*GRKTCQ
Trigger: CTGGCAAGTTTTTCTCCCTCATCTGAGGTCAGTTGC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGACGTGTTCAGACACGTaGACACACGTGTGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRTCSDT*THVWLC
Trigger: ACACAGCCACACGTGTGTGCACGTGTCTGAACACGT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCAGGATGACAGAAGGTaGCTTTGCAAACAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLQDDRR*LCKQPP
Trigger: GGGAGGCTGTTTGCAAAGGCACCTTCTGTCATCCTG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAATTTCTCCCTGTTCCTaGTCCAGTGTGGATGGCGGC +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPISPCS*SSVDGG
Trigger: GCCGCCATCCACACTGGAGCAGGAACAGGGAGAAAT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGCACAGCCAAGAACCTaGTCTTGGCCGTTCGAATAT +
Preference number: 2 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGAQPRT*SWPFEY
Trigger: ATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGAAGCCTCAGGGTCCTaGGAAGTGAGGAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKEASGS*EVRRGC
Trigger: ACAGCCTCTCCTCACTTCCCAGGACCCTGAGGCTTC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCATGAGGTTCCTGTCTaGATTTCTCCCTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFHEVPV*ISPCSC
Trigger: GCAGGAACAGGGAGAAATCCAGACAGGAACCTCATG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGGCCGTTCGAATATGTaGAAACTGAACTGTACAGGG +
Preference number: 2 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGGRSNM*KLNCTG
Trigger: CCCTGTACAGTTCAGTTTTCACATATTCGAACGGCC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCAGTCGGAGGTGTGAGTaGGGACCCCGAGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSSRRCE*GPRGLW
Trigger: CCACAGCCCTCGGGGTCCTCACTCACACCTCCGACT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCAGCACTTCATTCACTaGGAGGTGTGGTGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSQHFIH*EVWWGW
Trigger: CCACCCCCACCACACCTCTCAGTGAATGAAGTGCTG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCTGGGTGAGTTCTCATaGGGCAAAGTGTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLLGEFS*GKVCRL
Trigger: AAGCCTGCACACTTTGCCTCATGAGAACTCACCCAG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAAAGGGGAGAGCTGGGTaGGTTCTCATGAGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPKGRAG*VLMRQS
Trigger: ACTTTGCCTCATGAGAACTCACCCAGCTCTCCCCTT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGTGTGTGTGCGTGTGTaGAAAGTTTCTCTGGCCATG +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLVCVRV*KVSLAM
Trigger: CATGGCCAGAGAAACTTTGCACACACGCACACACAC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAGCTTTCTGCCAATCTaGACACCTGAAAGCGGAGTC +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSSFLPI*TPESGV
Trigger: GACTCCGCTTTCAGGTGTGCAGATTGGCAGAAAGCT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGAGAAACAAAGTCCAGTaGAGAAACCGTCCATCTGAT +
Preference number: 2 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWRNKVQ*RNRPSD
Trigger: ATCAGATGGACGGTTTCTGCACTGGACTTTGTTTCT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATGGGCTCCCAGGCTCTaGTCTCACCTACCACACAAA +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKWAPRL*SHLPHK
Trigger: TTTGTGTGGTAGGTGAGAGCAGAGCCTGGGAGCCCA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGTTGCAGCAGGATTTaGACTCTGAGAACAGCCTGT +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSCSRI*TLRTAC
Trigger: ACAGGCTGTTCTCAGAGTGCAAATCCTGCTGCAACT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCCATCTGATGCAGTGTaGAGAGTCCACAGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGPSDAV*RVHSRA
Trigger: TGCTCTGCTGTGGACTCTCCACACTGCATCAGATGG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGATGGGGTGTCACCCTTaGCATCCGAACTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLMGCHP*HPNCVC
Trigger: ACACACACAGTTCGGATGCCAAGGGTGACACCCCAT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCACCAGGAGATGAACTaGAAGAGCCTGTCTCAATCC +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSHQEMN*KSLSQS
Trigger: GGATTGAGACAGGCTCTTCCAGTTCATCTCCTGGTG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACAGTGGACCCAGAACTaGGAGGCAGACGACAAAATC +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPQWTQN*EADDKI
Trigger: GATTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp ACTGAAAGAGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTaGAATCCTGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTG +
Preference number: 2 (lower is better)
Translates to: TERDVSSQPAHLVAS*NPGDSQLLICVTAL
Trigger: CAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCTCTTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGTACACCACAGAGATaGGCTAGTTTACAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSTPQR*ASLQCD
Trigger: GTCACACTGTAAACTAGCTCATCTCTGTGGTGTACT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAAGGGGAGAGCTGGGTaGGTTCTCATGAGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKKGRAG*VLMRQS
Trigger: ACTTTGCCTCATGAGAACTCACCCAGCTCTCCCCTT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGGAAATGGCCCACTTTaGTCCATTTCAGTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSGNGPL*SISVCP
Trigger: TGGACACACTGAAATGGATCAAAGTGGGCCATTTCC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTACACGCCCAGTTCAATaGACACCCGTCCAAGCACAG +
Preference number: 2 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSTRPVQ*TPVQAQ
Trigger: CTGTGCTTGGACGGGTGTGCATTGAACTGGGCGTGT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGGCCACAAGGCACCATaGTCACTGCCGTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFGHKAP*SLPSWK
Trigger: CTTCCAGGACGGCAGTGAGCATGGTGCCTTGTGGCC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGGCCACAAGGCACCATaGTCACTGCCGTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCGHKAP*SLPSWK
Trigger: CTTCCAGGACGGCAGTGAGCATGGTGCCTTGTGGCC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCATTCACATCAAACCTaGAGAGGCAAGCCAACCCCT +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLHSHQT*RGKPTP
Trigger: AGGGGTTGGCTTGCCTCTGCAGGTTTGATGTGAATG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGGAAGTGGAGAACTGTaGCAGAACAAAGGCATCCAC +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPGSGEL*QNKGIH
Trigger: GTGGATGCCTTTGTTCTGGCACAGTTCTCCACTTCC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCCAGGAGGGCAGCTCTaGCGCTTACATTCAGAACTC +
Preference number: 2 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSPGGQL*RLHSEL
Trigger: GAGTTCTGAATGTAAGCGCCAGAGCTGCCCTCCTGG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAGGGGGAGAGGGCTGTaGTACAGTGCTTTTTGTAGT +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLRGRGL*YSAFCS
Trigger: ACTACAAAAAGCACTGTACCACAGCCCTCTCCCCCT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACAAAGTGTGCAGGCTTaGCCCCCAAACACTATGTTC +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPQSVQA*PPNTMF
Trigger: GAACATAGTGTTTGGGGGCCAAGCCTGCACACTTTG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGATCTTGTTATCTAACTaGACAAGGCAGCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRILLSN*TRQPQR
Trigger: CCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGAT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp AGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTaGCCAGGAAACCCTGGTACCCTTTTTCCAGCCAAAAACCAATCC +
Preference number: 2 (lower is better)
Translates to: RLTASHLCHCTALLS*PGNPGTLFPAKNQS
Trigger: GGATTGGTTTTTGGCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGCCAATCTGCACACCTaGAAGCGGAGTCTTCTAAAG +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKANLHT*KRSLLK
Trigger: CTTTAGAAGACTCCGCTTTCAGGTGTGCAGATTGGC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCAGATCTCAGCTGCCTaGACATTTCACAACATCAGC +
Preference number: 2 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGQISAA*TFHNIS
Trigger: GCTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTAAAGGAGGACCGGGGTaGAGGACAGAGAGCGTCAAG +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFKGGPG*RTESVK
Trigger: CTTGACGCTCTCTGTCCTTCACCCCGGTCCTCCTTT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCGAATATGTGAAAACTaGACTGTACAGGGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRRICEN*TVQGRP
Trigger: TGGCCTTCCCTGTACAGTTCAGTTTTCACATATTCG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTAGGCTGTGGCAGGTCTaGGGTGTGGTGGATGTGACT +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFRLWQV*GVVDVT
Trigger: AGTCACATCCACCACACCTCAGACCTGCCACAGCCT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCAGGAGAGAAAAGCCTaGAGACATCTTTCACAGCAT +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLQERKA*RHLSQH
Trigger: ATGCTGTGAAAGATGTCTTCAGGCTTTTCTCTCCTG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCAGAACCGCCTCTTGTaGAGGGAATGGGGTGTCACC +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFQNRLL*REWGVT
Trigger: GGTGACACCCCATTCCCTTCACAAGAGGCGGTTCTG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCCAACCCCTAAGTATTaGATTGAGGTGGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFPTPKY*IEVEKK
Trigger: CTTCTTTTCCACCTCAATTCAATACTTAGGGGTTGG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAATCAACTTTACTCCCTaGTCCTGTCATGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKINFTP*SCHGPR
Trigger: CCTGGGTCCATGACAGGAGCAGGGAGTAAAGTTGAT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTTGTGTGGGTCAAAGTaGCGGTCACTGTCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLCGSK*RSLSLP
Trigger: GGGAAGGGACAGTGACCGGCACTTTGACCCACACAA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGAGGGAACCAGAGGTTaGAAGAAACAATCATCTGCT +
Preference number: 2 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSEGTRG*KKQSSA
Trigger: AGCAGATGATTGTTTCTTGCAACCTCTGGTTCCCTC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGAGACCACAGTTTGCTaGAGCAAATGTGGAAATGGC +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPETTVC*SKCGNG
Trigger: GCCATTTCCACATTTGCTCCAGCAAACTGTGGTCTC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCAAGTAGAGGGAGGATaGGCTCCCAGGCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFQVEGG*APRLCS
Trigger: AGAGCAGAGCCTGGGAGCCCATCCTCCCTCTACTTG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGATCTTGTTATCTAACTaGACAAGGCAGCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLILLSN*TRQPQR
Trigger: CCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGAT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp GTGGCCTCTGTGCAGCGAACCTCCAGAGATGAAGTGCAGGCAGTTTaGCTCAGGTGGCATGTGTTTTGTTTCCTGGTTACTAAATGCCAT +
Preference number: 2 (lower is better)
Translates to: VASVQRTSRDEVQAV*LRWHVFCFLVTKCH
Trigger: ATGGCATTTAGTAACCAGGAAACAAAACACATGCCACCTGAGCAAAACTGCCTGCACTTCATCTCTGGAGGTTCGCTGCACAGAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGATGTGACTATGGGCTaGCTTCGGAGTCGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCDVTMG*LRSRCG
Trigger: TCCACAGCGACTCCGAAGTCAGCCCATAGTCACATC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGAGGTGTGGTGGATGTaGCTATGGGCTGACTTCGGA +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFEVWWM*LWADFG
Trigger: TCCGAAGTCAGCCCATAGTCACATCCACCACACCTC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCAGGCTGTGGCAGGTCTaGGGTGTGGTGGATGTGACT +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSRLWQV*GVVDVT
Trigger: AGTCACATCCACCACACCTCAGACCTGCCACAGCCT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGGGAAGGGGTGGAGTTaGCTTAGCCAACCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSGKGWS*LSQPQD
Trigger: ATCCTGGGGTTGGCTAAGTCAACTCCACCCCTTCCC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGAAACAAAGTCCAGTaGAGAAACCGTCCATCTGAT +
Preference number: 2 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRRNKVQ*RNRPSD
Trigger: ATCAGATGGACGGTTTCTGCACTGGACTTTGTTTCT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCAGGATGACAGAAGGTaGCTTTGCAAACAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFQDDRR*LCKQPP
Trigger: GGGAGGCTGTTTGCAAAGGCACCTTCTGTCATCCTG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGAAGCCTCAGGGTCCTaGGAAGTGAGGAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSEASGS*EVRRGC
Trigger: ACAGCCTCTCCTCACTTCCCAGGACCCTGAGGCTTC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCGGAACATCAACTGTTaGGGCCACAAGGCACCATGC +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFRNINC*GHKAPC
Trigger: GCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTTTTCTGAGTACCCAGTaGCATTCACATCAAACCTGC +
Preference number: 2 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGFLSTQ*HSHQTC
Trigger: GCAGGTTTGATGTGAATGCCACTGGGTACTCAGAAA...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGCCAATCTGCACACCTaGAAGCGGAGTCTTCTAAAG +
Preference number: 2 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFANLHT*KRSLLK
Trigger: CTTTAGAAGACTCCGCTTTCAGGTGTGCAGATTGGC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCAGAAACCGTCCATCTaGTGCAGTGTGGAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFQKPSI*CSVESP
Trigger: TGGACTCTCCACACTGCATCAGATGGACGGTTTCTG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCTCTGAAGAAACAAAATaGACCCCCAAACAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGSEETK*TPKQGK
Trigger: TTTACCTTGTTTGGGGGTTCATTTTGTTTCTTCAGA...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTATCTCACAGTTGAGTaGTGCTTTATTATTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFYLTVE*CFIIGK
Trigger: CTTCCCAATAATAAAGCATCACTCAACTGTGAGATA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGAGGTATCTCACAGTTaGGTGATGCTTTATTATTGG +
Preference number: 2 (lower is better)
Translates to: RCLFPACTPGGFLESWRLEVSHS*VMLYYW
Trigger: CCAATAATAAAGCATCACTCAACTGTGAGATACCTC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGTGTGTGTGCGTGTGTaGAAAGTTTCTCTGGCCATG +
Preference number: 2 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFVCVRV*KVSLAM
Trigger: CATGGCCAGAGAAACTTTGCACACACGCACACACAC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAACAACATCAGCTTTCTaGCAATCTGCACACCTGAAA +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPTTSAF*QSAHLK
Trigger: TTTCAGGTGTGCAGATTGGCAGAAAGCTGATGTTGT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAGCCTTCATGAGGTTTaGAATCAACTTTACTCCCTG +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLSLHEV*NQLYSL
Trigger: CAGGGAGTAAAGTTGATTGCAAACCTCATGAAGGCT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCCAGGAGGGCAGCTCTaGCGCTTACATTCAGAACTC +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSPGGQL*RLHSEL
Trigger: GAGTTCTGAATGTAAGCGCCAGAGCTGCCCTCCTGG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATTGCTGGAGCAAATGTaGAAATGGCCCACTTTGATC +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKLLEQM*KWPTLI
Trigger: GATCAAAGTGGGCCATTTCCACATTTGCTCCAGCAA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTTAAGTCTCCTTTCCTaGTTTGGGGAGATAGATAGG +
Preference number: 2 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLLSLLS*FGEIDR
Trigger: CCTATCTATCTCCCCAAATCAGGAAAGGAGACTTAA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTAGTACACCACAGAGATaGGCTAGTTTACAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSSTPQR*ASLQCD
Trigger: GTCACACTGTAAACTAGCTCATCTCTGTGGTGTACT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTAAGACTGTAGGATACTaGGTACACCACAGAGATGAG +
Preference number: 2 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSKTVGY*VHHRDE
Trigger: CTCATCTCTGTGGTGTACTCAGTATCCTACAGTCTT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTGGCCATTCTCAGCTTaGAGCCTTAGTGTAACCACC +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFWPFSA*SLSVTT
Trigger: GGTGGTTACACTAAGGCTTCAAGCTGAGAATGGCCA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACATCATAAAGTCTGCTaGTGTTTCTTCCCATATTCC +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPHHKVC*CFFPYS
Trigger: GGAATATGGGAAGAAACATCAGCAGACTTTATGATG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCATCATAAAGTCTGCTaGTGTTTCTTCCCATATTCC +
Preference number: 2 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLHHKVC*CFFPYS
Trigger: GGAATATGGGAAGAAACATCAGCAGACTTTATGATG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACCAACCCCTAAGTATTaGATTGAGGTGGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKPTPKY*IEVEKK
Trigger: CTTCTTTTCCACCTCAATTCAATACTTAGGGGTTGG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCACAACATCAGCTTTCTaGCAATCTGCACACCTGAAA +
Preference number: 2 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLTTSAF*QSAHLK
Trigger: TTTCAGGTGTGCAGATTGGCAGAAAGCTGATGTTGT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAACTTCAGATCTCAGCTaGCTGAACATTTCACAACAT +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPTSDLS*LNISQH
Trigger: ATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCAAAGTGTGCAGGCTTaGCCCCCAAACACTATGTTC +
Preference number: 2 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCQSVQA*PPNTMF
Trigger: GAACATAGTGTTTGGGGGCCAAGCCTGCACACTTTG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCATGAGGTTCCTGTCTaGATTTCTCCCTGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCHEVPV*ISPCSC
Trigger: GCAGGAACAGGGAGAAATCCAGACAGGAACCTCATG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCGAATATGTGAAAACTaGACTGTACAGGGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFRICEN*TVQGRP
Trigger: TGGCCTTCCCTGTACAGTTCAGTTTTCACATATTCG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGGCCGTTCGAATATGTaGAAACTGAACTGTACAGGG +
Preference number: 2 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCGRSNM*KLNCTG
Trigger: CCCTGTACAGTTCAGTTTTCACATATTCGAACGGCC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGATCCTAAGCCTTCATaGGGTTTGCAATCAACTTTA +
Preference number: 2 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKDPKPS*GLQSTL
Trigger: TAAAGTTGATTGCAAACCTCATGAAGGCTTAGGATC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGTTATAGACATTCAGTaGCTCCTAGCAGAGTCTAAA +
Preference number: 2 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLVIDIQ*LLAESK
Trigger: TTTAGACTCTGCTAGGAGGCACTGAATGTCTATAAC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATATTTTCTAATCAACTaGCCCAATAATGGGGCATCA +
Preference number: 2 (lower is better)
Translates to: WRLTASHLCHCTALLSLPYFLIN*PNNGAS
Trigger: TGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCAGATCTCAGCTGCCTaGACATTTCACAACATCAGC +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSQISAA*TFHNIS
Trigger: GCTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGTTATAGACATTCAGTaGCTCCTAGCAGAGTCTAAA +
Preference number: 2 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSVIDIQ*LLAESK
Trigger: TTTAGACTCTGCTAGGAGGCACTGAATGTCTATAAC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAGCCTTCATGAGGTTTaGAATCAACTTTACTCCCTG +
Preference number: 2 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSLHEV*NQLYSL
Trigger: CAGGGAGTAAAGTTGATTGCAAACCTCATGAAGGCT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGAGAAGAATGCTGAGTaGTCTAAATGCACATCTGGG +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFEKNAE*SKCTSG
Trigger: CCCAGATGTGCATTTAGAGCACTCAGCATTCTTCTC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGCTCAGTCCCCCAGTTaGAAATGTTGTGGAGGTAAT +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSAQSPS*KCCGGN
Trigger: ATTACCTCCACAACATTTCCAACTGGGGGACTGAGC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTTTCTGAGTACCCAGTaGCATTCACATCAAACCTGC +
Preference number: 2 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFFLSTQ*HSHQTC
Trigger: GCAGGTTTGATGTGAATGCCACTGGGTACTCAGAAA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 90 bp AGAACCGAGTGGAACCTTCCTCTTCTCCCTGGGAATGTTCCACTTTaGGACAAGAACAGACAGGTAAAAACAGCAACATTAAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: RTEWNLPLLPGNVPL*DKNRQVKTATLNSS
Trigger: TGAGCTGTTTAATGTTGCTGTTTTTACCTGTCTGTTCTTGTCCAAAAGTGGAACATTCCCAGGGAGAAGAGGAAGGTTCCACTCGGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCCAAGAACCTGGTCTTaGCCGTTCGAATATGTGAAA +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSPRTWS*PFEYVK
Trigger: TTTCACATATTCGAACGGCCAAGACCAGGTTCTTGG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTTGCTGGAGCAAATGTaGAAATGGCCCACTTTGATC +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSLLEQM*KWPTLI
Trigger: GATCAAAGTGGGCCATTTCCACATTTGCTCCAGCAA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGAGGTATCTCACAGTTaGGTGATGCTTTATTATTGG +
Preference number: 2 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCEVSHS*VMLYYW
Trigger: CCAATAATAAAGCATCACTCAACTGTGAGATACCTC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCACTTCAGATCTCAGCTaGCTGAACATTTCACAACAT +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSTSDLS*LNISQH
Trigger: ATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTATCTCACAGTTGAGTaGTGCTTTATTATTGGGAAG +
Preference number: 2 (lower is better)
Translates to: YFLINWPNNGASPAQLCSYLTVE*CFIIGK
Trigger: CTTCCCAATAATAAAGCATCACTCAACTGTGAGATA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp CATGCTCACTGCCGTCCTGGAAGTCGGAGGTGTGAGTaGGGACCCCGAGGGCTGTGGGCAGCAGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: HAHCRPGSRRCE*GPRGLWAAELL
Trigger: CAGGAGCTCTGCTGCCCACAGCCCTCGGGGTCCTCACTCACACCTCCGACTTCCAGGACGGCAGTGAGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp GCACCATGCTCACTGCCGTCCTGGAAGTCGGAGGTGTaGGTGAGGACCCCGAGGGCTGTGGGCAGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: APCSLPSWKSEV*VRTPRAVGSRA
Trigger: AGCTCTGCTGCCCACAGCCCTCGGGGTCCTCACTCACACCTCCGACTTCCAGGACGGCAGTGAGCATGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp GGTGGATGTGACTATGGGCTGACTTCGGAGTCGCTGTaGACTGCCAGGGTCCGGGAGGGGGTGAGTAGTGTG +
Preference number: 3 (lower is better)
Translates to: GGCDYGLTSESL*TARVREGVSSV
Trigger: CACACTACTCACCCCCTCCCGGACCCTGGCAGTCCACAGCGACTCCGAAGTCAGCCCATAGTCACATCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp CCCTACGGCCACCAAACCCCGCAGCTGTGGAACCCGTaGATCCTCCCCAACGCCTGGTCTCCAAATAGCACA +
Preference number: 3 (lower is better)
Translates to: PYGHQTPQLWNP*ILPNAWSPNST
Trigger: TGTGCTATTTGGAGACCAGGCGTTGGGGAGGATTCACGGGTTCCACAGCTGCGGGGTTTGGTGGCCGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp CTGCCAAGCAGGATGGTGGCAAAGCTTCCTCACTGGTaGTGCGGCAGGTGGCCTCTGTGCAGCGAACCTCCA +
Preference number: 3 (lower is better)
Translates to: LPSRMVAKLPHW*CGRWPLCSEPP
Trigger: TGGAGGTTCGCTGCACAGAGGCCACCTGCCGCATCACCAGTGAGGAAGCTTTGCCACCATCCTGCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp GGCATTGCCGCTGTTGCCAAGGCGAGGGCAAAGCTATaGACTTCGGGCGGCTCACTGGGACACCTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: GIAAVAKARAKL*TSGGSLGHLLF
Trigger: GAAGAGGAGGTGTCCCAGTGAGCCGCCCGAAGTTCATAGCTTTGCCCTCGCCTTGGCAACAGCGGCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp GGCCAAACACCATCCCACCCTCGGAACATCAACTGTTaGGGCCACAAGGCACCATGCTCACTGCCGTCCTGG +
Preference number: 3 (lower is better)
Translates to: GQTPSHPRNINC*GHKAPCSLPSW
Trigger: CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp AGGAGAGGCTGTGGCAGGTCTGAGGTGTGGTGGATGTaGCTATGGGCTGACTTCGGAGTCGCTGTGGACTGC +
Preference number: 3 (lower is better)
Translates to: RRGCGRSEVWWM*LWADFGVAVDC
Trigger: GCAGTCCACAGCGACTCCGAAGTCAGCCCATAGTCACATCCACCACACCTCAGACCTGCCACAGCCTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp CAGCTCTGGCGCTTACATTCAGAACTCCCAAACCACTaGTTCCCCTACGGCCACCAAACCCCGCAGCTGTGG +
Preference number: 3 (lower is better)
Translates to: QLWRLHSELPNH*FPYGHQTPQLW
Trigger: CCACAGCTGCGGGGTTTGGTGGCCGTAGGGGAAGCAGTGGTTTGGGAGTTCTGAATGTAAGCGCCAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp TCCGGCTGGTCTCAGACCTCATCATCTGTGCCAACCTaGAATTCAGGAAGCGCCACAGGAATCCCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: SGWSQTSSSVPT*NSGSATGIPGP
Trigger: GGGGCCTGGGATTCCTGTGGCGCTTCCTGAATTCCAGGTTGGCACAGATGATGAGGTCTGAGACCAGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp CCGTGGCCCAGATGGTACCAATGCTCTTGGTGGACCTaGGATTCCTTGGGCTACTCCACTCCGAGGGACAAC +
Preference number: 3 (lower is better)
Translates to: PWPRWYQCSWWT*DSLGYSTPRDN
Trigger: GTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAGGTCCACCAAGAGCATTGGTACCATCTGGGCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp CCCCTCCTTCCGGCTGGTCTCAGACCTCATCATCTGTaGCAACCTGGAATTCAGGAAGCGCCACAGGAATCC +
Preference number: 3 (lower is better)
Translates to: PLLPAGLRPHHL*QPGIQEAPQES
Trigger: GGATTCCTGTGGCGCTTCCTGAATTCCAGGTTGGCACAGATGATGAGGTCTGAGACCAGCCGGAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp AGGCCATTTCTGTCCTGGGGACCACATGGCTCAAGGTaGGTAGTCTCCACATCAGCAGGCCACCACCTTAGG +
Preference number: 3 (lower is better)
Translates to: RPFLSWGPHGSR*VVSTSAGHHLR
Trigger: CCTAAGGTGGTGGCCTGCTGATGTGGAGACTACTCACCTTGAGCCATGTGGTCCCCAGGACAGAAATGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp CCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATaGACACCCGTCCAAGCACAGGCGTATGTACACGCA +
Preference number: 3 (lower is better)
Translates to: PNRSAFLTRPVQ*TPVQAQAYVHA
Trigger: TGCGTGTACATACGCCTGTGCTTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp AAAGTCCAGTGCAGAAACCGTCCATCTGATGCAGTGTaGAGAGTCCACAGCAGAGCAGCCGAGTGTGTGGGG +
Preference number: 3 (lower is better)
Translates to: KVQCRNRPSDAV*RVHSRAAECVG
Trigger: CCCCACACACTCGGCTGCTCTGCTGTGGACTCTCCACACTGCATCAGATGGACGGTTTCTGCACTGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp TGTCTGGATTTCTCCCTGTTCCTGCTCCAGTGTGGATaGCGGCTCTTCTCTGATAAGTGGGCTCAGTCCCCC +
Preference number: 3 (lower is better)
Translates to: CLDFSLFLLQCG*RLFSDKWAQSP
Trigger: GGGGGACTGAGCCCACTTATCAGAGAAGAGCCGCCATCCACACTGGAGCAGGAACAGGGAGAAATCCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp AGGCGAGGGCAAAGCTATGAACTTCGGGCGGCTCACTaGGACACCTCCTCTTCCAGCATATCCATCGTGATG +
Preference number: 3 (lower is better)
Translates to: RRGQSYELRAAH*DTSSSSISIVM
Trigger: CATCACGATGGATATGCTGGAAGAGGAGGTGTCCCAGTGAGCCGCCCGAAGTTCATAGCTTTGCCCTCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAGGCAGCTCCTATCCTaGTGTGGGTCAAAGTGCCGG +
Preference number: 3 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLRQLLS*CGSKCR
Trigger: CCGGCACTTTGACCCACACAAGGATAGGAGCTGCCT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp TTGCTCCAAGTAGAGGGAGGATGGGCTCCCAGGCTCTaGTCTCACCTACCACACAAAGTAGGCAGCTCCTAT +
Preference number: 3 (lower is better)
Translates to: LLQVEGGWAPRL*SHLPHKVGSSY
Trigger: ATAGGAGCTGCCTACTTTGTGTGGTAGGTGAGAGCAGAGCCTGGGAGCCCATCCTCCCTCTACTTGGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp AAGGCAGCCCCAGAGGACAGCTTTCTGAGTACCCAGTaGCATTCACATCAAACCTGCAGAGGCAAGCCAACC +
Preference number: 3 (lower is better)
Translates to: KAAPEDSFLSTQ*HSHQTCRGKPT
Trigger: GGTTGGCTTGCCTCTGCAGGTTTGATGTGAATGCCACTGGGTACTCAGAAAGCTGTCCTCTGGGGCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp TCCTGGTTACTAAATGCCATTAGAGGGAGGCCTGGCTaGCTGAGCCAGGAATCGGGAAGTGGAGAACTGTGC +
Preference number: 3 (lower is better)
Translates to: SWLLNAIRGRPG*LSQESGSGELC
Trigger: GCACAGTTCTCCACTTCCCGATTCCTGGCTCAGCCAGCCAGGCCTCCCTCTAATGGCATTTAGTAACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp GGGGAGGAGGGCACCAAGGCTTTCTCAAGATTTACCTaGTGTGAACGACTCACTGGCGTGAAGTTGTGGGGA +
Preference number: 3 (lower is better)
Translates to: GEEGTKAFSRFT*CERLTGVKLWG
Trigger: TCCCCACAACTTCACGCCAGTGAGTCGTTCACATCAGGTAAATCTTGAGAAAGCCTTGGTGCCCTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp GAATCCTGGAGACTCACAGCTTCTCATCTGTGTCACTaGACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGT +
Preference number: 3 (lower is better)
Translates to: ESWRLTASHLCH*TALLSLPGNPG
Trigger: ACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCAGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp TTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTaGAGACTCACAGCTTCTCATCTGTGTCACTGCACT +
Preference number: 3 (lower is better)
Translates to: FPACTPGGFLES*RLTASHLCHCT
Trigger: AGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCCAAGAACCTGGTCTaGGCCGTTCGAATATGTGAA +
Preference number: 3 (lower is better)
Translates to: RCLFPACTPGGFLESWRLAKNLV*AVRICE
Trigger: TTCACATATTCGAACGGCCAAGACCAGGTTCTTGGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGTACAGCCTTTCCTGTaGGTGACACCAGTTTCCGGA +
Preference number: 3 (lower is better)
Translates to: WRLTASHLCHCTALLSLPVQPFL*VTPVSG
Trigger: TCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTAC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp CTTCATTCACTGAGAGGTGTGGTGGGGGTGGAGTGCTaGTTTGTGACAGAACCGCCTCTTGTGAAGGGAATG +
Preference number: 3 (lower is better)
Translates to: LHSLRGVVGVEC*FVTEPPLVKGM
Trigger: CATTCCCTTCACAAGAGGCGGTTCTGTCACAAATCAGCACTCCACCCCCACCACACCTCTCAGTGAATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp TCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTaGGTACCCAGTGGCATTCACATCAAACCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SNWTRQPQRTAF*VPSGIHIKPAE
Trigger: CTCTGCAGGTTTGATGTGAATGCCACTGGGTACTCAGAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp ACCTTCCCAATGACCCTGTGGCCCCCAGAGAGCATGTaGTATATTCCTAACATCTCTCCAGAAGCCCACTCT +
Preference number: 3 (lower is better)
Translates to: TFPMTLWPPESM*YIPNISPEAHS
Trigger: AGAGTGGGCTTCTGGAGAGATGTTAGGAATATAGCACATGCTCTCTGGGGGCCACAGGGTCATTGGGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCAGTTTACAGTGTGACTaGAGGAACAAAAGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGSLQCD*RNKRGK
Trigger: CTTGCCCCTTTTGTTCCTCAAGTCACACTGTAAACT...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCCAAGAACCTGGTCTaGGCCGTTCGAATATGTGAA +
Preference number: 3 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGAKNLV*AVRICE
Trigger: TTCACATATTCGAACGGCCAAGACCAGGTTCTTGGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTTCGGAACATCAACTGTaGGGGCCACAAGGCACCATG +
Preference number: 3 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSSEHQL*GPQGTM
Trigger: CATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGA...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTCTTCACCTCCCCTTTaGGGTCCATGTATGTCAAAA +
Preference number: 3 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSSSPPL*GPCMSK
Trigger: TTTTGACATACATGGACCCAAAAGGGGAGGTGAAGA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTaGAAAGTTTCTCTGGCCATGGAGATGAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVRV*KVSLAMEMSTE
Trigger: CTCTGTGCTCATCTCCATGGCCAGAGAAACTTTGCACACACGCACACACACACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp CTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTaGCAGGAAACCCTGGTACCCTTTTTCCAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: LLICVTALLSCP*QETLVPFFQPK
Trigger: TTTTGGCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp AGCCTGAAGACATCTTTCACAGCATCGAGTCGAACATaGCCAAACACCATCCCACCCTCGGAACATCAACTG +
Preference number: 3 (lower is better)
Translates to: SLKTSFTASSRT*PNTIPPSEHQL
Trigger: CAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTaGTACCCTTTTTCCAGCCAAAAACCAATCCTCAGA +
Preference number: 3 (lower is better)
Translates to: SLHCSPVLARKP*YPFSSQKPILR
Trigger: TCTGAGGATTGGTTTTTGGCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp CCAACGCCTGGTCTCCAAATAGCACAGCCAAGAACCTaGTCTTGGCCGTTCGAATATGTGAAAACTGAACTG +
Preference number: 3 (lower is better)
Translates to: PTPGLQIAQPRT*SWPFEYVKTEL
Trigger: CAGTTCAGTTTTCACATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGCTATTTGGAGACCAGGCGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCAGTTTACAGTGTGACTaGAGGAACAAAAGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLSLQCD*RNKRGK
Trigger: CTTGCCCCTTTTGTTCCTCAAGTCACACTGTAAACT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp CACAGCCAAGAACCTGGTCTTGGCCGTTCGAATATGTaGAAACTGAACTGTACAGGGAAGGCCAAGAAAGAC +
Preference number: 3 (lower is better)
Translates to: HSQEPGLGRSNM*KLNCTGKAKKD
Trigger: GTCTTTCTTGGCCTTCCCTGTACAGTTCAGTTTTCACATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp TTTTCCAGCCAAAAACCAATCCTCAGATGTCAAGTGTaGAGCTGCCAAGCAGGATGGTGGCAAAGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: FSSQKPILRCQV*SCQAGWWQSFL
Trigger: GAGGAAGCTTTGCCACCATCCTGCTTGGCAGCTTCACACTTGACATCTGAGGATTGGTTTTTGGCTGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp TGCAGCGAACCTCCAGAGATGAAGTGCAGGCAGTTTTaGTCAGGTGGCATGTGTTTTGTTTCCTGGTTACTA +
Preference number: 3 (lower is better)
Translates to: CSEPPEMKCRQF*SGGMCFVSWLL
Trigger: TAGTAACCAGGAAACAAAACACATGCCACCTGAGCAAAACTGCCTGCACTTCATCTCTGGAGGTTCGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CCA 72 bp CCTGGTCTCCAAATAGCACAGCCAAGAACCTGGTCTTaGCCGTTCGAATATGTGAAAACTGAACTGTACAGG +
Preference number: 3 (lower is better)
Translates to: PGLQIAQPRTWS*PFEYVKTELYR
Trigger: CCTGTACAGTTCAGTTTTCACATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGCTATTTGGAGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTGTGTAGAACCTAATTaGCTCACAGCTGGGGGAACA +
Preference number: 3 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFCVEPN*LTAGGT
Trigger: TGTTCCCCCAGCTGTGAGCAAATTAGGTTCTACACA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCGAGGTATCTCACAGTaGAGTGATGCTTTATTATTG +
Preference number: 3 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGRGISQ*SDALLL
Trigger: CAATAATAAAGCATCACTCAACTGTGAGATACCTCG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp ACAGACATCCCATGCTTCAAAGAGAAGAATGCTGAGTaGTCTAAATGCACATCTGGGCTTAGTCCGATGGCT +
Preference number: 3 (lower is better)
Translates to: TDIPCFKEKNAE*SKCTSGLSPMA
Trigger: AGCCATCGGACTAAGCCCAGATGTGCATTTAGAGCACTCAGCATTCTTCTCTTTGAAGCATGGGATGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp ACTGTACAGGGAAGGCCAAGAAAGACTGTAGGATACTaGGTACACCACAGAGATGAGCTAGTTTACAGTGTG +
Preference number: 3 (lower is better)
Translates to: TVQGRPRKTVGY*VHHRDELVYSV
Trigger: CACACTGTAAACTAGCTCATCTCTGTGGTGTACTCAGTATCCTACAGTCTTTCTTGGCCTTCCCTGTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp AACACTATGTTCCAGGTCCATGATCCTAAGCCTTCATaGGGTTTGCAATCAACTTTACTCCCTGCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: NTMFQVHDPKPS*GLQSTLLPAPV
Trigger: GACAGGAGCAGGGAGTAAAGTTGATTGCAAACCTCATGAAGGCTTAGGATCATGGACCTGGAACATAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp TCTCAGCTGCCTGAACATTTCACAACATCAGCTTTCTaGCAATCTGCACACCTGAAAGCGGAGTCTTCTAAA +
Preference number: 3 (lower is better)
Translates to: SQLPEHFTTSAF*QSAHLKAESSK
Trigger: TTTAGAAGACTCCGCTTTCAGGTGTGCAGATTGGCAGAAAGCTGATGTTGTGAAATGTTCAGGCAGCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR GCA 72 bp AAGGACAGAGAGCGTCAAGTCACTTCAGATCTCAGCTaGCTGAACATTTCACAACATCAGCTTTCTGCCAAT +
Preference number: 3 (lower is better)
Translates to: KDRERQVTSDLS*LNISQHQLSAN
Trigger: ATTGGCAGAAAGCTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGTGACTTGACGCTCTCTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCGAGGTATCTCACAGTaGAGTGATGCTTTATTATTG +
Preference number: 3 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFRGISQ*SDALLL
Trigger: CAATAATAAAGCATCACTCAACTGTGAGATACCTCG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR-3UTR CAA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCCCCTAAGTATTGAATaGAGGTGGAAAAGAAGTGAA +
Preference number: 3 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFPLSIE*RWKRSE
Trigger: TTCACTTCTTTTCCACCTCAATTCAATACTTAGGGG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR TCA 72 bp AAAATGTCAGCTTTATACTCTTTAAGTCTCCTTTCCTaGTTTGGGGAGATAGATAGGTGTGTTTCTAAGGCG +
Preference number: 3 (lower is better)
Translates to: KMSALYSLSLLS*FGEIDRCVSKA
Trigger: CGCCTTAGAAACACACCTATCTATCTCCCCAAATCAGGAAAGGAGACTTAAAGAGTATAAAGCTGACATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGACCCGAAGGTCTCCTTaGCCAGGCCCGTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRTRRSP*PGPWSP
Trigger: CGGGCTCCACGGGCCTGGCCAAGGAGACCTTCGGGT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGGAATCCCAGGCCCCTaGGGTTGCGGACAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRGIPGP*GCGQGW
Trigger: CCAGCCTTGTCCGCAACCTCAGGGGCCTGGGATTCC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGGGCAGGGGAGGTACTaGATCCCGGGCTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRGQGRY*IPGWGF
Trigger: AAAGCCCCAGCCCGGGATTCAGTACCTCCCCTGCCC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGGCCGCAGCTTCTGCTaGGGGTCCAGGATCATGGCC +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRGRSFC*GSRIMA
Trigger: GGCCATGATCCTGGACCCGCAGCAGAAGCTGCGGCC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCCAGGTCGGCACACATaGCCCTCAACAGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRPGRHT*PSTAAL
Trigger: CAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCGTTGCTCAGCTCGATaGCTGCCTGCTTCACCGGCG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRRCSAR*LPASPA
Trigger: CGCCGGTGAAGCAGGCAGTCATCGAGCTGAGCAACG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGGTGGCAGAGCTTGCTaGCAGTGCCTGCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRGGRAC*QCLRRW
Trigger: CCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCCTCCCGGGCCGGGCTaGTGGTGCGCGCACAATGCC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFPPGPG*WCAHNA
Trigger: GGCATTGTGCGCGCACCAGCAGCCCGGCCCGGGAGG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCTCGTGCTGGTAGGGTaGCACAGGCCGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRLVLVG*HRPQLL
Trigger: CAGAAGCTGCGGCCTGTGCCACCCTACCAGCACGAG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTGCCTGGGCCAGCCCTaGCGTGCGGCCCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLCLGQP*RAALAL
Trigger: GAGAGCGAGGGCCGCACGGCAGGGCTGGCCCAGGCA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGTGCCTGGGCCAGCCCTaGCGTGCGGCCCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRCLGQP*RAALAL
Trigger: GAGAGCGAGGGCCGCACGGCAGGGCTGGCCCAGGCA...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGAGCGCTTTCTGCGGTTaGCTTGCTCGCCGGAGATCC +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRSAFCG*LARRRS
Trigger: GGATCTCCGGCGAGCAAGGCAACCGCAGAAAGCGCT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCCTTGGCCAGGCCCGTaGAGCCCGCCAGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRPWPGP*SPPGPR
Trigger: GCGAGGACCTGGCGGGCTCCACGGGCCTGGCCAAGG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGTGCGGTGTAAGAGGGTaGCACATCGGACCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRCGVRG*HIGPRR
Trigger: CCTCCGTGGTCCGATGTGCCACCCTCTTACACCGCA...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR TCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTCTGGGAGTGGCAGGTaGCACCGATGCCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWSGSGR*HRCLGR
Trigger: CCTGCCTAGGCATCGGTGTCACCTGCCACTCCCAGA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGAGGCTGTGGCAGGTCTaGGGTGTGGTGGATGTGACT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRRLWQV*GVVDVT
Trigger: AGTCACATCCACCACACCTCAGACCTGCCACAGCCT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCCTCAACAGCCGCTCTaGGATGTTCTGCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRPQQPL*DVLPLL
Trigger: AAGGAGCGGCAGAACATCGCAGAGCGGCTGTTGAGG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTGCATGCTGCGGGCCTaGAGTGTCCGCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWCMLRA*SVRLLS
Trigger: GCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGGCCTCGGCTGGCACTaGCTCTGGGCCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGGLGWH*LWALHL
Trigger: AAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGGCC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCAGCGAGGCCTCGGCTaGCACTGGCTCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRQRGLG*HWLWAL
Trigger: GAGGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCAGCGAGGCCTCGGCTaGCACTGGCTCTGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSQRGLG*HWLWAL
Trigger: GAGGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGATTGGCCCGATTTTCTaGAATGGCTCCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRIGPIF*NGSGGS
Trigger: GGAGCCCCCGGAGCCATTCCAGAAAATCGGGCCAAT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000288466.11
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCAAGTAGAGGGAGGATaGGCTCCCAGGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRQVEGG*APRLCS
Trigger: AGAGCAGAGCCTGGGAGCCCATCCTCCCTCTACTTG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGAGAGGGAGGCCTGGCTaGCTGAGCCAGGAATCGGGA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWRGRPG*LSQESG
Trigger: TCCCGATTCCTGGCTCAGCCAGCCAGGCCTCCCTCT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCCCTCGCTCTCTCCTaGCTGGCGAGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGALALS*LARPSP
Trigger: GGGGCTGGGCCTCGCCAGCCAGGAGAGAGCGAGGGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGGAGGCTCCCTCCCCTaGGGTGGCTTCGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSGGSLP*GGFGVS
Trigger: CGAGACACCGAAGCCACCTCAGGGGAGGGAGCCTCC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGCAGCCGCCTCCGTTTaGTTAGAAGCGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRAAASV*LEALVH
Trigger: GTGAACAAGCGCTTCTAATCAAACGGAGGCGGCTGC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGGGCAGGGGAGGTACTaGATCCCGGGCTGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFGQGRY*IPGWGF
Trigger: AAAGCCCCAGCCCGGGATTCAGTACCTCCCCTGCCC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGCTTTTCCTTCCGGCTaGACTGGCTCCGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWAFPSG*TGSVSL
Trigger: CAGGCTGACGGAGCCAGTGCAGCCGGAAGGAAAAGC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGGCCCTCCACCTTGGTaGTCTTCTGGCTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWGPPPW*SSGCAS
Trigger: TGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGGAGTCGCTGTGGACTaGCAGGGTCCGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSGVAVD*QGPGGG
Trigger: ACCCCCTCCCGGACCCTGGCAGTCCACAGCGACTCC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGGAGTCGCTGTGGACTaGCAGGGTCCGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRGVAVD*QGPGGG
Trigger: ACCCCCTCCCGGACCCTGGCAGTCCACAGCGACTCC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGTGGCCCTGGACGAGCTaGCTGGGCCAGCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLWPWTS*LGQPCR
Trigger: ACGGCAGGGCTGGCCCAGGCAGCTCGTCCAGGGCCA...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGTGGCCACGACACCTTaGTCGAAGGGGTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGVATTP*SKGSAR
Trigger: CCGGGCAGACCCCTTCGACCAAGGTGTCGTGGCCAC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGGACCCCGAGGGCTGTaGGCAGCAGAGCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGGPRGL*AAELLE
Trigger: TTCCAGGAGCTCTGCTGCCCACAGCCCTCGGGGTCC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGTCTGGATCATCCGGTaGCTCCCACCCGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGVWIIR*LPPGGS
Trigger: ACTGCCCCCGGGTGGGAGCCACCGGATGATCCAGAC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGGAGGCTCCCTCCCCTaGGGTGGCTTCGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLGGSLP*GGFGVS
Trigger: CGAGACACCGAAGCCACCTCAGGGGAGGGAGCCTCC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCGTTGCTCAGCTCGATaGCTGCCTGCTTCACCGGCG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRCSAR*LPASPA
Trigger: CGCCGGTGAAGCAGGCAGTCATCGAGCTGAGCAACG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCTTCGGTGTCTCGGTaGGCCCGCACGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGASVSR*ARTWVW
Trigger: CCAGACCCACGTGCGGGCGCACCGAGACACCGAAGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTTTCACCGCGTAGGATaGCGCCCACCCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLFHRVG*RPPWLG
Trigger: GCCCAGCCAGGGTGGGCGGCATCCTACGCGGTGAAA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTGGCCCTGGACGAGCTaGCTGGGCCAGCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLWPWTS*LGQPCR
Trigger: ACGGCAGGGCTGGCCCAGGCAGCTCGTCCAGGGCCA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGACCCAAGGGTCTGCTaGTTGCGGACGCCGCCGATC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSDPRVC*LRTPPI
Trigger: GATCGGCGGCGTCCGCAACCAGCAGACCCTTGGGTC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGTGGCCACGACACCTTaGTCGAAGGGGTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSVATTP*SKGSAR
Trigger: CCGGGCAGACCCCTTCGACCAAGGTGTCGTGGCCAC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGCCAACACTCTGGGAGTaGCAGGTGACACCGATGCCT +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWPTLWE*QVTPMP
Trigger: AGGCATCGGTGTCACCTGCCACTCCCAGAGTGTTGG...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCCTTGGCCAGGCCCGTaGAGCCCGCCAGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSPWPGP*SPPGPR
Trigger: GCGAGGACCTGGCGGGCTCCACGGGCCTGGCCAAGG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGAAGCCTCAGGGTCCTaGGAAGTGAGGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWEASGS*EVRRGC
Trigger: ACAGCCTCTCCTCACTTCCCAGGACCCTGAGGCTTC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGGGCAGCAGAGCTCCTaGAAGCCTCAGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRGQQSS*KPQGPG
Trigger: CCCAGGACCCTGAGGCTTCCAGGAGCTCTGCTGCCC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGATGGGGTGTCACCCTTaGCATCCGAACTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRMGCHP*HPNCVC
Trigger: ACACACACAGTTCGGATGCCAAGGGTGACACCCCAT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGCAAGTAGAGGGAGGATaGGCTCCCAGGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWQVEGG*APRLCS
Trigger: AGAGCAGAGCCTGGGAGCCCATCCTCCCTCTACTTG...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGAGGGAGGCCTGGCTaGCTGAGCCAGGAATCGGGA +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRGRPG*LSQESG
Trigger: TCCCGATTCCTGGCTCAGCCAGCCAGGCCTCCCTCT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGAGCTGCCAAGCAGGATaGTGGCAAAGCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRSCQAG*WQSFLT
Trigger: AGTGAGGAAGCTTTGCCACCATCCTGCTTGGCAGCT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTTCCCAATGACCCTGTaGCCCCCAGAGAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWFPMTL*PPESMC
Trigger: GCACATGCTCTCTGGGGGCCACAGGGTCATTGGGAA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCTTCGGGCGGCTCACTaGGACACCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFLRAAH*DTSSSS
Trigger: GCTGGAAGAGGAGGTGTCCCAGTGAGCCGCCCGAAG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCAGACCGGCTGGCACCTaGGTTATGGCAGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGRPAGT*VMAGAP
Trigger: AGGGGCTCCTGCCATAACCCAGGTGCCAGCCGGTCT...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCGGCCTGGTAGGCTGTaGGGATGTAGCAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRPGRL*GCSRSQ
Trigger: CTGACTCCTGCTACATCCTCACAGCCTACCAGGCCG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGCCGATCATCTTCCTaGGCTGCGGGGTTCTCGACG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSRSSS*AAGFST
Trigger: CGTCGAGAACCCCGCAGCTCAGGAAGATGATCGGCT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTGGAAGTCGGAGGTGTaGGTGAGGACCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLWKSEV*VRTPRA
Trigger: AGCCCTCGGGGTCCTCACTCACACCTCCGACTTCCA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGAGCCTTTCCTGTTGGTaGCACCAGTTTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWSLSCW*HQFPEG
Trigger: TCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCACTGGGCTCCTTTGGTaGAAGCCAGGGCTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLTGLLW*KPGLPR
Trigger: TCGGGGGAGCCCTGGCTTTCACCAAAGGAGCCCAGT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTGGTGCTCTTCTGGCTaGGCTTCAAGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFWCSSG*ASSAPC
Trigger: GCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTCCTTGGCCTCGCCCTaGCAGATCACCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSLASP*QITSWM
Trigger: CATCCAGGAGGTGATCTGGCAGGGCGAGGCCAAGGA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTCACCTGGTTGTACATaGGTGGCAGGTGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWSPGCT*VAGASA
Trigger: CGCTGAAGCACCTGCCACGCATGTACAACCAGGTGA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTGGAGAAGGCGGACGTaGTCACCCGGCAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFWRRRT*SPGNPS
Trigger: TGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGCTCGATGACCTCGTaGATGCTGCGGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSSMTS*MLRACS
Trigger: ACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGGCCGCAGCTTCTGCTaGGGGTCCAGGATCATGGCC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQGRSFC*GSRIMA
Trigger: GGCCATGATCCTGGACCCGCAGCAGAAGCTGCGGCC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTGGGCTCCCAGGCTCTaGTCTCACCTACCACACAAA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWWAPRL*SHLPHK
Trigger: TTTGTGTGGTAGGTGAGAGCAGAGCCTGGGAGCCCA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGCTGAGTGCTCTAAATaGACATCTGGGCTTAGTCCG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRAECSK*TSGLSP
Trigger: CGGACTAAGCCCAGATGTGCATTTAGAGCACTCAGC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGGCAGGTGGCCTCTGTaGAGCGAACCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFGRWPL*SEPPEM
Trigger: CATCTCTGGAGGTTCGCTGCACAGAGGCCACCTGCC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTGTCTCTTCCCAGCCTaGACACCTGGTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWCLFPA*TPGGFL
Trigger: AAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGGCTGGCACTGGCTCTaGGCCCTCCACCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLGWHWL*ALHLGA
Trigger: AGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGGCTGGCACTGGCTCTaGGCCCTCCACCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPGWHWL*ALHLGA
Trigger: AGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCAGAGCGGGGCTTCTTaGCAGCGGGCTCGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLQSGAS*QRARSR
Trigger: CCGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCAGATCAGGGGTAGCCTaGAAGAGGGGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGRSGVA*KRGSCR
Trigger: CCTGCAGGAGCCCCTCTTCCAGGCTACCCCTGATCT...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGCCAGAAGGCGAGCTTaGCGAGTTTTGTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRARRRA*RVLCAF
Trigger: AAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGACTTCGGAGTCGCTGTaGACTGCCAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRTSESL*TARVRE
Trigger: CTCCCGGACCCTGGCAGTCCACAGCGACTCCGAAGT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGCGGAACATCAACTGTTaGGGCCACAAGGCACCATGC +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWRNINC*GHKAPC
Trigger: GCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCG...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCACCAGGAGATGAACTaGAAGAGCCTGTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRHQEMN*KSLSQS
Trigger: GGATTGAGACAGGCTCTTCCAGTTCATCTCCTGGTG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCAGTCAAGGTGCCCCATaGGACGCACGGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLSQGAP*DARLGR
Trigger: CCTGCCCAACCGTGCGTCCCATGGGGCACCTTGACT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCTGGCACCTGGGTTATaGCAGGAGCCCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRLAPGL*QEPLLP
Trigger: CGGAAGGAGGGGCTCCTGCCATAACCCAGGTGCCAG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCGCTGCCACGAAGCGTaGAGATGGGGAGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRRCHEA*RWGDLW
Trigger: CCAGAGGTCTCCCCATCTCCACGCTTCGTGGCAGCG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGGAACTCCTTCCCGCTaGCCACGCTCAGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLGTPSR*PRSVHP
Trigger: TGGGTGCACTGAGCGTGGTCAGCGGGAAGGAGTTCC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATCTGGGAGTGGCAGGTaGCACCGATGCCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPSGSGR*HRCLGR
Trigger: CCTGCCTAGGCATCGGTGTCACCTGCCACTCCCAGA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGATCGCTCAGCTTTCCTaGCACGCCCAGTTCAATGCA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWIAQLS*HAQFNA
Trigger: TGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGAT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACAGCTGTGGAACCCGTaGATCCTCCCCAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPQLWNP*ILPNAW
Trigger: CCAGGCGTTGGGGAGGATTCACGGGTTCCACAGCTG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCAGTCGGAGGTGTGAGTaGGGACCCCGAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLSRRCE*GPRGLW
Trigger: CCACAGCCCTCGGGGTCCTCACTCACACCTCCGACT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCCAGAACCGCCTCTTGTaGAGGGAATGGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGQNRLL*REWGVT
Trigger: GGTGACACCCCATTCCCTTCACAAGAGGCGGTTCTG...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCAGCACTTCATTCACTaGGAGGTGTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFQHFIH*EVWWGW
Trigger: CCACCCCCACCACACCTCTCAGTGAATGAAGTGCTG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGAAGGGGAGAGCTGGGTaGGTTCTCATGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWKGRAG*VLMRQS
Trigger: ACTTTGCCTCATGAGAACTCACCCAGCTCTCCCCTT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTCCCCCAAAGGCTTGTaGTGGAAAGACCTACAGTGG +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWSPKGL*WKDLQW
Trigger: CCACTGTAGGTCTTTCCATCACAAGCCTTTGGGGGA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCGAGGGCAAAGCTATaGACTTCGGGCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLARAKL*TSGGSL
Trigger: CAGTGAGCCGCCCGAAGTTCATAGCTTTGCCCTCGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGACTGGGCTCCTTTGGTaGAAGCCAGGGCTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLTGLLW*KPGLPR
Trigger: TCGGGGGAGCCCTGGCTTTCACCAAAGGAGCCCAGT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGGAAGGGACGGGGCATaGATATGTCAAACAGTGACC +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWGRDGA*ICQTVT
Trigger: GGTCACTGTTTGACATATTCATGCCCCGTCCCTTCC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCTCCCTGCTCGCAGTaGTTTTCCTTCCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLAPCSQ*FSFRLH
Trigger: GTGCAGCCGGAAGGAAAAGCACTGCGAGCAGGGAGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGGCCCTCCACCTTGGTaGTCTTCTGGCTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRGPPPW*SSGCAS
Trigger: TGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACAAGGGTCTGCTGGTTaGGGACGCCGCCGATCACCA +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQQGSAG*GRRRSP
Trigger: TGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCGCTCTGCGATGTTCTaGCGCTCCTTTTCGGGGATC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRSAMF*RSFSGI
Trigger: GATCCCCGAAAAGGAGCGGCAGAACATCGCAGAGCG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATGCATGCTGCGGGCCTaGAGTGTCCGCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPCMLRA*SVRLLS
Trigger: GCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCTTGCTGACAGTGCCTaGGTCGTTGGCCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLLADSA*VVGLGR
Trigger: ACGGCCAAGGCCAACGACGCAGGCACTGTCAGCAAG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCTTGCTGACAGTGCCTaGGTCGTTGGCCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLADSA*VVGLGR
Trigger: ACGGCCAAGGCCAACGACGCAGGCACTGTCAGCAAG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGAGTTGCAGCAGGATTTaGACTCTGAGAACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRSCSRI*TLRTAC
Trigger: ACAGGCTGTTCTCAGAGTGCAAATCCTGCTGCAACT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCGTCTGGGTCTTCGCTaGCACGAAGCGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRRLGLR*HEAWRW
Trigger: CCATCTCCACGCTTCGTGGCAGCGAAGACCCAGACG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTCCTTCCGGCTGCACTaGCTCCGTCAGCCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLSFRLH*LRQPAE
Trigger: CTCCGCAGGCTGACGGAGCCAGTGCAGCCGGAAGGA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATCCTTCCGGCTGCACTaGCTCCGTCAGCCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSFRLH*LRQPAE
Trigger: CTCCGCAGGCTGACGGAGCCAGTGCAGCCGGAAGGA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCTGGGCCCTCCACCTTaGTGCTCTTCTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGLGPPP*CSSGCA
Trigger: AGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGACCCAAGGGTCTGCTaGTTGCGGACGCCGCCGATC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKDPRVC*LRTPPI
Trigger: GATCGGCGGCGTCCGCAACCAGCAGACCCTTGGGTC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCCTTCACCTCGTCCGTaGCCACGACACCTTGGTCGA +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRPSPRP*PRHLGR
Trigger: TCGACCAAGGTGTCGTGGCCACGGACGAGGTGAAGG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCCTTCACCTCGTCCGTaGCCACGACACCTTGGTCGA +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLPSPRP*PRHLGR
Trigger: TCGACCAAGGTGTCGTGGCCACGGACGAGGTGAAGG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTCAGGGCCAACACTCTaGGAGTGGCAGGTGACACCG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLSGPTL*EWQVTP
Trigger: CGGTGTCACCTGCCACTCCCAGAGTGTTGGCCCTGA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGGCACATGCCGGCCTTaGAGAAGGCGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLGTCRP*RRRTCS
Trigger: TGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAGCTGCAGGGTGGGCTaGCTCTCGTTGCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGSCRVG*LSLLSS
Trigger: CGAGCTGAGCAACGAGAGCCAGCCCACCCTGCAGCT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGCACCAGCTGCAGGGTaGGCTGGCTCTCGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQAPAAG*AGSRCS
Trigger: TGAGCAACGAGAGCCAGCCCACCCTGCAGCTGGTGC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCTCGTGCTGGTAGGGTaGCACAGGCCGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLLVLVG*HRPQLL
Trigger: CAGAAGCTGCGGCCTGTGCCACCCTACCAGCACGAG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGCCCTCGCTCTCTCCTaGCTGGCGAGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFALALS*LARPSP
Trigger: GGGGCTGGGCCTCGCCAGCCAGGAGAGAGCGAGGGC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCTCAGAGCCCGTGTCTaGATCATCCGGTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLRARV*IIRWLP
Trigger: TGGGAGCCACCGGATGATCCAGACACGGGCTCTGAG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615615.4
3UTR CAA 72 bp AGGCATCCACCCGTGGCCCAGATGGTACCAATGCTCTaGGTGGACCTGAGATTCCTTGGGCTACTCCACTCC +
Preference number: 4 (lower is better)
Translates to: RHPPVAQMVPML*VDLRFLGLLHS
Trigger: GGAGTGGAGTAGCCCAAGGAATCTCAGGTCCACCAAGAGCATTGGTACCATCTGGGCCACGGGTGGATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGTGCCCAGGATTTCAGTaGCCGAGAAGGCCCCATAGC +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRCPGFQ*PRRPHS
Trigger: GCTATGGGGCCTTCTCGGTCACTGAAATCCTGGGCA...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCGAATATGTGAAAACTaGACTGTACAGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRRICEN*TVQGRP
Trigger: TGGCCTTCCCTGTACAGTTCAGTTTTCACATATTCG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGTGGGGGTGGAGTGCTaGTTTGTGACAGAACCGCCT +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLVGVEC*FVTEPP
Trigger: AGGCGGTTCTGTCACAAATCAGCACTCCACCCCCAC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGGGAAGGGGTGGAGTTaGCTTAGCCAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSGKGWS*LSQPQD
Trigger: ATCCTGGGGTTGGCTAAGTCAACTCCACCCCTTCCC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCTGGACACCAGGAGATaGACTGGAAGAGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFLDTRR*TGRACL
Trigger: GAGACAGGCTCTTCCAGTTCATCTCCTGGTGTCCAG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAAGCTTCCTCACTGGTaGTGCGGCAGGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGKLPHW*CGRWPL
Trigger: CAGAGGCCACCTGCCGCATCACCAGTGAGGAAGCTT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGGAATCCCAGGCCCCTaGGGTTGCGGACAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSGIPGP*GCGQGW
Trigger: CCAGCCTTGTCCGCAACCTCAGGGGCCTGGGATTCC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCCTCCCGGGCCGGGCTaGTGGTGCGCGCACAATGCC +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSPPGPG*WCAHNA
Trigger: GGCATTGTGCGCGCACCAGCAGCCCGGCCCGGGAGG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGTGGTGCTCTTCTGGCTaGGCTTCAAGCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLWCSSG*ASSAPC
Trigger: GCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCA...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATCCTTGGCCTCGCCCTaGCAGATCACCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPSLASP*QITSWM
Trigger: CATCCAGGAGGTGATCTGGCAGGGCGAGGCCAAGGA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCCAAGGGTCTGCTGGTTaGGGACGCCGCCGATCACCA +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLQGSAG*GRRRSP
Trigger: TGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTG...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGCTTCGGTGTCTCGGTaGGCCCGCACGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFASVSR*ARTWVW
Trigger: CCAGACCCACGTGCGGGCGCACCGAGACACCGAAGC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGCTGACCACGCTCAGTaGACCCAGGTCGGCACACAT +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQADHAQ*TQVGTH
Trigger: ATGTGTGCCGACCTGGGTGCACTGAGCGTGGTCAGC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTACATGCGTGGCAGGTaGTTCAGCGCCAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLYMRGR*FSASVL
Trigger: CAACACGCTGGCGCTGAAGCACCTGCCACGCATGTA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCAGCAGCGAAGGCACATaGCGGCCTTGGAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLSSEGT*RPWRRR
Trigger: CCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCCTGCAGTGTCCGCTTaGTCAGCACGCTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGPAVSA*SARSAP
Trigger: TGGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCCTGCAGTGTCCGCTTaGTCAGCACGCTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLPAVSA*SARSAP
Trigger: TGGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCTCAGCTCGATGACTaGCTGCTTCACCGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGAQLDD*LLHRRQ
Trigger: CTGACGCCGGTGAAGCAGGCAGTCATCGAGCTGAGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCATCATCTTCCTGAGCTaGGGGGTTCTCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLIIFLS*GVLDGS
Trigger: GCTGCCGTCGAGAACCCCGCAGCTCAGGAAGATGAT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCTTGTGTGGGTCAAAGTaGCGGTCACTGTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGLCGSK*RSLSLP
Trigger: GGGAAGGGACAGTGACCGGCACTTTGACCCACACAA...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGCTGAGTGCTCTAAATaGACATCTGGGCTTAGTCCG +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWAECSK*TSGLSP
Trigger: CGGACTAAGCCCAGATGTGCATTTAGAGCACTCAGC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTGTCTCTTCCCAGCCTaGACACCTGGTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFCLFPA*TPGGFL
Trigger: AAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGAAAGGATGCGGGGGTaGACGCACGTGGTTACTGAG +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSERMRG*THVVTE
Trigger: CTCAGTAACCACGTGCGTGCACCCCCGCATCCTTTC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCCTGGGCCCTCCACCTTaGTGCTCTTCTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLLGPPP*CSSGCA
Trigger: AGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAG...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCCCGATTTTCTGGAATaGCTCCGGGGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLPDFLE*LRGLLL
Trigger: AAGGAGGAGCCCCCGGAGCCATTCCAGAAAATCGGG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCCCGATTTTCTGGAATaGCTCCGGGGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRPDFLE*LRGLLL
Trigger: AAGGAGGAGCCCCCGGAGCCATTCCAGAAAATCGGG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCTGGTTGTACATGCGTaGCAGGTGCTTCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLVVHA*QVLQRQ
Trigger: CTGGCGCTGAAGCACCTGCCACGCATGTACAACCAG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGTGCTTGTTGAGGCTCTaGATGAGGTTCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRCLLRL*MRFIFL
Trigger: CAAGAAGATGAACCTCATCCAGAGCCTCAACAAGCA...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCCTCCAGGAAGAGGTaGCAGAGCTTGCTGACAGTG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLASRKR*QSLLTV
Trigger: CACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAGATCAGGGGTAGCCTaGAAGAGGGGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGRSGVA*KRGSCR
Trigger: CCTGCAGGAGCCCCTCTTCCAGGCTACCCCTGATCT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTTTACACACCCGCTTCTaGCGCCCACGGCCGGAACCG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSLHTRF*RPRPEP
Trigger: CGGTTCCGGCCGTGGGCGCCAGAAGCGGGTGTGTAA...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCACTTCGGAGTCGCTGTaGACTGCCAGGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLTSESL*TARVRE
Trigger: CTCCCGGACCCTGGCAGTCCACAGCGACTCCGAAGT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCTGGGCTTAGTCCGATaGCTTTCCAAGAAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRLGLVR*LSKKVK
Trigger: TTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCAAAGGGGCCAGTGGCTaGACCTGTGAGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGKGASG*TCEIFG
Trigger: CCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTT...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCACCCGTGGCCCAGATaGTACCAATGCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRHPWPR*YQCSWW
Trigger: CCACCAAGAGCATTGGTACCATCTGGGCCACGGGTG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGCAGTTTTGCTCAGGTaGCATGTGTTTTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRAVLLR*HVFCFL
Trigger: CAGGAAACAAAACACATGCCACCTGAGCAAAACTGC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTTCCCAATGACCCTGTaGCCCCCAGAGAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSFPMTL*PPESMC
Trigger: GCACATGCTCTCTGGGGGCCACAGGGTCATTGGGAA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACTTCGGGCGGCTCACTaGGACACCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKLRAAH*DTSSSS
Trigger: GCTGGAAGAGGAGGTGTCCCAGTGAGCCGCCCGAAG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGCTCCCACCTACTACTaGCTCCACGGGATAGCCGGA +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQAPTYY*LHGIAG
Trigger: TCCGGCTATCCCGTGGAGCCAGTAGTAGGTGGGAGC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGCTCCCACCTACTACTaGCTCCACGGGATAGCCGGA +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPAPTYY*LHGIAG
Trigger: TCCGGCTATCCCGTGGAGCCAGTAGTAGGTGGGAGC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAGTCAAGGTGCCCCATaGGACGCACGGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSQGAP*DARLGR
Trigger: CCTGCCCAACCGTGCGTCCCATGGGGCACCTTGACT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTTTGGCCCGATTTTCTaGAATGGCTCCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSFGPIF*NGSGGS
Trigger: GGAGCCCCCGGAGCCATTCCAGAAAATCGGGCCAAA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGACGTCTGGGTTTGGGTaGCTGGAGGGGTGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLTSGFG*LEGCGV
Trigger: TACACCGCACCCCTCCAGCCACCCAAACCCAGACGT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTCAGCGCCAGCGTGTTaGAGTTGCCCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSSAPAC*SCPGFQ
Trigger: CTGAAATCCTGGGCAACTTCAACACGCTGGCGCTGA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGTTCAAGGCACAGGCTaGGCAGCGAAGGCACATGCC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKVQGTG*AAKAHA
Trigger: GGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAAC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCACAGACCTTGCCGATaGTCTCCTCGTGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLHRPCR*SPRAGR
Trigger: CCTACCAGCACGAGGAGATCATCGGCAAGGTCTGTG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACACAGACCTTGCCGATaGTCTCCTCGTGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQHRPCR*SPRAGR
Trigger: CCTACCAGCACGAGGAGATCATCGGCAAGGTCTGTG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCAGCCGATCATCTTCCTaGGCTGCGGGGTTCTCGACG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLSRSSS*AAGFST
Trigger: CGTCGAGAACCCCGCAGCTCAGGAAGATGATCGGCT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAAAAGGAGGACCGGGGTaGAGGACAGAGAGCGTCAAG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPKGGPG*RTESVK
Trigger: CTTGACGCTCTCTGTCCTTCACCCCGGTCCTCCTTT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCAGCTGTGGAACCCGTaGATCCTCCCCAACGCCTGG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSQLWNP*ILPNAW
Trigger: CCAGGCGTTGGGGAGGATTCACGGGTTCCACAGCTG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGAGGTGTGGTGGATGTaGCTATGGGCTGACTTCGGA +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFREVWWM*LWADFG
Trigger: TCCGAAGTCAGCCCATAGTCACATCCACCACACCTC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAAGGCTGTGGCAGGTCTaGGGTGTGGTGGATGTGACT +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQRLWQV*GVVDVT
Trigger: AGTCACATCCACCACACCTCAGACCTGCCACAGCCT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACAGAACCGCCTCTTGTaGAGGGAATGGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQQNRLL*REWGVT
Trigger: GGTGACACCCCATTCCCTTCACAAGAGGCGGTTCTG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGTGGGGGTGGAGTGCTaGTTTGTGACAGAACCGCCT +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQVGVEC*FVTEPP
Trigger: AGGCGGTTCTGTCACAAATCAGCACTCCACCCCCAC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCAGCACTTCATTCACTaGGAGGTGTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGQHFIH*EVWWGW
Trigger: CCACCCCCACCACACCTCTCAGTGAATGAAGTGCTG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCTGGCATGGTAGTTCCTaGGACCACAGTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGWHGSS*DHSLLE
Trigger: CTCCAGCAAACTGTGGTCTCAGGAACTACCATGCCA...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCTGGACACCAGGAGATaGACTGGAAGAGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLDTRR*TGRACL
Trigger: GAGACAGGCTCTTCCAGTTCATCTCCTGGTGTCCAG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTGCTCTTGGTGGACCTaGGATTCCTTGGGCTACTCC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSCSWWT*DSLGYS
Trigger: GGAGTAGCCCAAGGAATCTCAGGTCCACCAAGAGCA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGACCTGGTGGCTTCCTTaGATCCTGGAGACTCACAGC +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRTWWLP*ILETHS
Trigger: GCTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCATCGTGATGACAAGATaGGGGGAGTGTCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFIVMTR*GECPQW
Trigger: CCATTGGGGACACTCCCCTCATCTTGTCATCACGAT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGGAAGGGACGGGGCATaGATATGTCAAACAGTGACC +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGGRDGA*ICQTVT
Trigger: GGTCACTGTTTGACATATTCATGCCCCGTCCCTTCC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGGTGGTTGTACAAAATaGTTTCCTGATGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRGGCTK*FPDAWD
Trigger: ATCCCAAGCATCAGGAAATCATTTTGTACAACCACC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGCTTTTCCTTCCGGCTaGACTGGCTCCGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLAFPSG*TGSVSL
Trigger: CAGGCTGACGGAGCCAGTGCAGCCGGAAGGAAAAGC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATCCGTCATCGTTCCTTaGTCGGCACTCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSVIVP*SALSEA
Trigger: GGCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCACTAAACACATCCACTaGGTGCAGGTCTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGTKHIH*VQVSVL
Trigger: GAGCACCGAGACCTGCACGCAGTGGATGTGTTTAGT...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACGCTCTGCGATGTTCTaGCGCTCCTTTTCGGGGATC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQRSAMF*RSFSGI
Trigger: GATCCCCGAAAAGGAGCGGCAGAACATCGCAGAGCG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGCTGACCACGCTCAGTaGACCCAGGTCGGCACACAT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLADHAQ*TQVGTH
Trigger: ATGTGTGCCGACCTGGGTGCACTGAGCGTGGTCAGC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTCACCTGGTTGTACATaGGTGGCAGGTGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLSPGCT*VAGASA
Trigger: CGCTGAAGCACCTGCCACGCATGTACAACCAGGTGA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAATGCCTAGGCAGGCATTaGTGCCCAAGGCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQCLGRH*CPRHRS
Trigger: TGACCTGTGCCTTGGGCAGCAATGCCTGCCTAGGCA...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTGGAGAAGGCGGACGTaGTCACCCGGCAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLWRRRT*SPGNPS
Trigger: TGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTTGCTCAGCACGCTCTaGACCACCGAGTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLLSTL*TTEFKA
Trigger: TGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAGCTCGATGACTGCCTaGTTCACCGGCGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGSSMTA*FTGVRM
Trigger: CATCCTGACGCCGGTGAAGCAGGCAGTCATCGAGCT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTATCATCTTCCTGAGCTaGGGGGTTCTCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGIIFLS*GVLDGS
Trigger: GCTGCCGTCGAGAACCCCGCAGCTCAGGAAGATGAT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTTGGCGAGTTTTGTGTaGTTTTGGGTAACGCACGAC +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWLASFV*FWVTHD
Trigger: GTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGGCCACAAGGCACCATaGTCACTGCCGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLGHKAP*SLPSWK
Trigger: CTTCCAGGACGGCAGTGAGCATGGTGCCTTGTGGCC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGACAGAAGGTGCCTTTaGAAACAGCCTCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLDRRCL*KQPPAM
Trigger: CATGGCGGGAGGCTGTTTGCAAAGGCACCTTCTGTC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCAGGATGACAGAAGGTaGCTTTGCAAACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFQDDRR*LCKQPP
Trigger: GGGAGGCTGTTTGCAAAGGCACCTTCTGTCATCCTG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGTGGGCTCCCAGGCTCTaGTCTCACCTACCACACAAA +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRWAPRL*SHLPHK
Trigger: TTTGTGTGGTAGGTGAGAGCAGAGCCTGGGAGCCCA...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGGCAGGTGGCCTCTGTaGAGCGAACCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLGRWPL*SEPPEM
Trigger: CATCTCTGGAGGTTCGCTGCACAGAGGCCACCTGCC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCTGCTCTCCTGTCCTTaGCAGGAAACCCTGGTACCC +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLLLSCP*QETLVP
Trigger: GGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGGCCTCGGCTGGCACTaGCTCTGGGCCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCGLGWH*LWALHL
Trigger: AAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGGCC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGGTGTAGGGTTCGCTaGAGTTCTGCGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRCRVR*SSANCC
Trigger: ACAGCAGTTCGCAGAACTCCAGCGAACCCTACACCT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTACCCGAAGGTCTCCTTaGCCAGGCCCGTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFTRRSP*PGPWSP
Trigger: CGGGCTCCACGGGCCTGGCCAAGGAGACCTTCGGGT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGTTCCAGCAGGGTGGTaGAGACGTCTCCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLVPAGW*RRLLQR
Trigger: TCGCTGGAGGAGACGTCTCCACCACCCTGCTGGAAC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCCTCCAGGAAGAGGTaGCAGAGCTTGCTGACAGTG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGASRKR*QSLLTV
Trigger: CACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGCGGGTCCAGGATCATaGCCACCTTGTGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFAGPGS*PPCGPG
Trigger: ACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCACGCACGACCAGTACTaGAAGAGATCAGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSTHDQY*KRSGVA
Trigger: GGCTACCCCTGATCTCTTCCAGTACTGGTCGTGCGT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCACGCACGACCAGTACTaGAAGAGATCAGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLTHDQY*KRSGVA
Trigger: GGCTACCCCTGATCTCTTCCAGTACTGGTCGTGCGT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCCAGGAGGGCAGCTCTaGCGCTTACATTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLPGGQL*RLHSEL
Trigger: GAGTTCTGAATGTAAGCGCCAGAGCTGCCCTCCTGG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCCAGGAGGGCAGCTCTaGCGCTTACATTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSPGGQL*RLHSEL
Trigger: GAGTTCTGAATGTAAGCGCCAGAGCTGCCCTCCTGG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGATCAAATCTCTTCCTaGAGGACAGACATCCCATGC +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWDQISS*RTDIPC
Trigger: GCATGGGATGTCTGTCCTCCAGGAAGAGATTTGATC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCACCCGTGGCCCAGATaGTACCAATGCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGHPWPR*YQCSWW
Trigger: CCACCAAGAGCATTGGTACCATCTGGGCCACGGGTG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGCTGCCAAGCAGGATaGTGGCAAAGCTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSCQAG*WQSFLT
Trigger: AGTGAGGAAGCTTTGCCACCATCCTGCTTGGCAGCT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGGCTTCCTTGAATCCTaGAGACTCACAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWGFLES*RLTASH
Trigger: ATGAGAAGCTGTGAGTCTCCAGGATTCAAGGAAGCC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGGGGAGTGTCCCCAATaGAGCCATCTCACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGGECPQ*SHLTGC
Trigger: ACAGCCTGTGAGATGGCTCCATTGGGGACACTCCCC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCTGGCACCTGGGTTATaGCAGGAGCCCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSLAPGL*QEPLLP
Trigger: CGGAAGGAGGGGCTCCTGCCATAACCCAGGTGCCAG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCCCCGACTGGTTCGTCTaGGTCTTCGCTGCCACGAAG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLPDWFV*VFAATK
Trigger: CTTCGTGGCAGCGAAGACCCAGACGAACCAGTCGGG...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGGAGTGCGGAACGTCTaGGTTTGGGTGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSGVRNV*VWVAGG
Trigger: CCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSRRSRI*SAERLG
Trigger: ACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615615.4
3UTR CAA 72 bp CTCTCACCTACCACACAAAGTAGGCAGCTCCTATCCTaGTGTGGGTCAAAGTGCCGGTCACTGTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSPTTQSRQLLS*CGSKCRSLSLP
Trigger: GGGAAGGGACAGTGACCGGCACTTTGACCCACACAAGGATAGGAGCTGCCTACTTTGTGTGGTAGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCCAGGTCGGCACACATaGCCCTCAACAGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFPGRHT*PSTAAL
Trigger: CAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATCAGCGCCAGCGTGTTaGAGTTGCCCAGGATTTCAG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPSAPAC*SCPGFQ
Trigger: CTGAAATCCTGGGCAACTTCAACACGCTGGCGCTGA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACAAGCACATAGCTCTTaGTGTGGTTGCCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQQAHSS*CGCPRP
Trigger: AGGCCGAGGGCAACCACATCAAGAGCTATGTGCTTG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTCACGTACACTGTCCTaGTCTCCGACATCACGAACT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSRTLS*SPTSRT
Trigger: AGTTCGTGATGTCGGAGATCAGGACAGTGTACGTGA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAATGCACCAGCAACAGTaGGTCCGTCACCGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQMHQQQ*VRHRVP
Trigger: TGGAACTCGGTGACGGACTCACTGTTGCTGGTGCAT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCAGCCGCCTCCGTTTaGTTAGAAGCGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGAAASV*LEALVH
Trigger: GTGAACAAGCGCTTCTAATCAAACGGAGGCGGCTGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAAAGGAGGACCGGGGTaGAGGACAGAGAGCGTCAAG +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKKGGPG*RTESVK
Trigger: CTTGACGCTCTCTGTCCTTCACCCCGGTCCTCCTTT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGGGAAGGGGTGGAGTTaGCTTAGCCAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKGKGWS*LSQPQD
Trigger: ATCCTGGGGTTGGCTAAGTCAACTCCACCCCTTCCC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAAGGGGAGAGCTGGGTaGGTTCTCATGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRKGRAG*VLMRQS
Trigger: ACTTTGCCTCATGAGAACTCACCCAGCTCTCCCCTT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGACTAAACACATCCACTaGGTGCAGGTCTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRTKHIH*VQVSVL
Trigger: GAGCACCGAGACCTGCACGCAGTGGATGTGTTTAGT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGTCAGCTGCATGGGACTaGATGTGCTCCAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRSAAWD*MCSNRL
Trigger: CAACCTGTTGGAGCACATGCAGTCCCATGCAGCTGA...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACTAGGCAGGCATTGCTaGCCAAGGCACAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPLGRHC*PRHRSL
Trigger: AAGTGACCTGTGCCTTGGGCAGCAATGCCTGCCTAG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAACCTTGTGGGCCGGGTaGACCTTGAAGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPTLWAG*TLKFSL
Trigger: CAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGACCTTGTGGGCCGGGTaGACCTTGAAGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLTLWAG*TLKFSL
Trigger: CAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTACAGGCCGCAGCTTCTaGTGCGGGTCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSTGRSF*CGSRIM
Trigger: CATGATCCTGGACCCGCAGCAGAAGCTGCGGCCTGT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAATTTCTCCCTGTTCCTaGTCCAGTGTGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQISPCS*SSVDGG
Trigger: GCCGCCATCCACACTGGAGCAGGAACAGGGAGAAAT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACTGCTCTCCTGTCCTTaGCAGGAAACCCTGGTACCC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKLLSCP*QETLVP
Trigger: GGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTCTCATCTGTGTCACTaGACTGCTCTCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSHLCH*TALLSL
Trigger: CAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCTCTCATCTGTGTCACTaGACTGCTCTCCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGSHLCH*TALLSL
Trigger: CAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGA...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGGGTGGCTGGAGGGGTaGGGTGTAAGAGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFGWLEG*GVRGWH
Trigger: GTGCCACCCTCTTACACCGCACCCCTCCAGCCACCC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTTTTCTGCGGTTGCCTTaGTCGCCGGAGATCCCGAAT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGFLRLP*SPEIPN
Trigger: ATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGAAA...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTTCTACAACAGCAGGTaGCGATCGGGACTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLFYNSR*RSGLVG
Trigger: TCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCACGTTCTGCACCCAGTaGTGCACAAGGTCACCGCTG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLTFCTQ*CTRSPL
Trigger: CAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGGCACATGCCGGCCTTaGAGAAGGCGGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFGTCRP*RRRTCS
Trigger: TGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTGCTTGTTGAGGCTCTaGATGAGGTTCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWCLLRL*MRFIFL
Trigger: CAAGAAGATGAACCTCATCCAGAGCCTCAACAAGCA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAGCTGCAGGGTGGGCTaGCTCTCGTTGCTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSCRVG*LSLLSS
Trigger: CGAGCTGAGCAACGAGAGCCAGCCCACCCTGCAGCT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCAGAGCGGGGCTTCTTaGCAGCGGGCTCGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCQSGAS*QRARSR
Trigger: CCGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTTACACACCCGCTTCTaGCGCCCACGGCCGGAACCG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFLHTRF*RPRPEP
Trigger: CGGTTCCGGCCGTGGGCGCCAGAAGCGGGTGTGTAA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAATCCTCCCCAACGCCTaGTCTCCAAATAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQILPNA*SPNSTA
Trigger: GGCTGTGCTATTTGGAGACCAGGCGTTGGGGAGGAT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGGACCCCGAGGGCTGTaGGCAGCAGAGCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCGPRGL*AAELLE
Trigger: TTCCAGGAGCTCTGCTGCCCACAGCCCTCGGGGTCC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCGGAACATCAACTGTTaGGGCCACAAGGCACCATGC +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLRNINC*GHKAPC
Trigger: GCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGCATCGAGTCGAACATaGCCAAACACCATCCCACCC +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLASSRT*PNTIPP
Trigger: GGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCAAAGTGTGCAGGCTTaGCCCCCAAACACTATGTTC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFQSVQA*PPNTMF
Trigger: GAACATAGTGTTTGGGGGCCAAGCCTGCACACTTTG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCTGCTCCAGTGTGGATaGCGGCTCTTCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRLLQCG*RLFSDK
Trigger: CTTATCAGAGAAGAGCCGCCATCCACACTGGAGCAG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCTCCTATCCTTGTGTaGGTCAAAGTGCCGGTCACT +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLAPILV*VKVPVT
Trigger: AGTGACCGGCACTTTGACCCACACAAGGATAGGAGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGAGAAGAGGGCACCTTaGTACAGCCTTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSEKRAP*YSLSCW
Trigger: CCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAAAAGGGGCCAGTGGCTaGACCTGTGAGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPKGASG*TCEIFG
Trigger: CCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGTCCTGGGGACCACATaGCTCAAGGTGAGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGVLGTT*LKVSSL
Trigger: GAGACTACTCACCTTGAGCCATGTGGTCCCCAGGAC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGGACCTGAGATTCCTTaGGCTACTCCACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKGPEIP*ATPLRG
Trigger: CCCTCGGAGTGGAGTAGCCCAAGGAATCTCAGGTCC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAAAGGCATCCACCCGTaGCCCAGATGGTACCAATGC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGKGIHP*PRWYQC
Trigger: GCATTGGTACCATCTGGGCCACGGGTGGATGCCTTT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAAAAGGCATCCACCCGTaGCCCAGATGGTACCAATGC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQKGIHP*PRWYQC
Trigger: GCATTGGTACCATCTGGGCCACGGGTGGATGCCTTT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCCGGGCTGGGGCTTTTaGCGACTTAAAGAACCGAGT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGPGWGF*RLKEPS
Trigger: ACTCGGTTCTTTAAGTCGCCAAAAGCCCCAGCCCGG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCGGAACGTCTGGGTTTaGGTGGCTGGAGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFRNVWV*VAGGVR
Trigger: CCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615615.4
3UTR CAA 72 bp TTAAGATGCATCCCAGAGATAGAGGCATTGCCGCTGTaGCCAAGGCGAGGGCAAAGCTATGAACTTCGGGCG +
Preference number: 4 (lower is better)
Translates to: LRCIPEIEALPL*PRRGQSYELRA
Trigger: CGCCCGAAGTTCATAGCTTTGCCCTCGCCTTGGCAACAGCGGCAATGCCTCTATCTCTGGGATGCATCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACAAGCACATAGCTCTTaGTGTGGTTGCCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKQAHSS*CGCPRP
Trigger: AGGCCGAGGGCAACCACATCAAGAGCTATGTGCTTG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGGTGGCAGAGCTTGCTaGCAGTGCCTGCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFGGRAC*QCLRRW
Trigger: CCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCCAATCTGCACACCTaGAAGCGGAGTCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLANLHT*KRSLLK
Trigger: CTTTAGAAGACTCCGCTTTCAGGTGTGCAGATTGGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCAGAAACCGTCCATCTaGTGCAGTGTGGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLQKPSI*CSVESP
Trigger: TGGACTCTCCACACTGCATCAGATGGACGGTTTCTG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACTGGGTGAGTTCTCATaGGGCAAAGTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPLGEFS*GKVCRL
Trigger: AAGCCTGCACACTTTGCCTCATGAGAACTCACCCAG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAAGCTTCCTCACTGGTaGTGCGGCAGGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFKLPHW*CGRWPL
Trigger: CAGAGGCCACCTGCCGCATCACCAGTGAGGAAGCTT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGAACGTCTTAACTACTaGGAAAGGATGCGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGERLNY*ERMRGC
Trigger: GCACCCCCGCATCCTTTCTCAGTAGTTAAGACGTTC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGAACGTCTTAACTACTaGGAAAGGATGCGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPERLNY*ERMRGC
Trigger: GCACCCCCGCATCCTTTCTCAGTAGTTAAGACGTTC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGGTTCGCTGGAGTTCTaGGAACTGCTGTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPGSLEF*ELLFVS
Trigger: AGAGACGAACAGCAGTTCGCAGAACTCCAGCGAACC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTTTCTGCACCCAGTGGTaGACAAGGTCACCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSFCTQW*TRSPLS
Trigger: CGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAA...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCAGCAGCGAAGGCACATaGCGGCCTTGGAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCSSEGT*RPWRRR
Trigger: CCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGCTCAGCTCGATGACTaGCTGCTTCACCGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFAQLDD*LLHRRQ
Trigger: CTGACGCCGGTGAAGCAGGCAGTCATCGAGCTGAGC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTACGTGTTCAGACACGTaGACACACGTGTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGTCSDT*THVWLC
Trigger: ACACAGCCACACGTGTGTGCACGTGTCTGAACACGT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGTGTGTGTGCGTGTGTaGAAAGTTTCTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRVCVRV*KVSLAM
Trigger: CATGGCCAGAGAAACTTTGCACACACGCACACACAC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCACACGCCCAGTTCAATaGACACCCGTCCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLTRPVQ*TPVQAQ
Trigger: CTGTGCTTGGACGGGTGTGCATTGAACTGGGCGTGT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGACAACATCAGCTTTCTaGCAATCTGCACACCTGAAA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWTTSAF*QSAHLK
Trigger: TTTCAGGTGTGCAGATTGGCAGAAAGCTGATGTTGT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGGCCACAAGGCACCATaGTCACTGCCGTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFGHKAP*SLPSWK
Trigger: CTTCCAGGACGGCAGTGAGCATGGTGCCTTGTGGCC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACAACCCTCAACGCTaGAGTTCTTGGCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGDNPQR*SSWLGL
Trigger: AAGCCCAAGCCAAGAACTGCAGCGTTGAGGGTTGTC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTAGGCATTGCCGCTGTTaGCAAGGCGAGGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSRHCRC*QGEGKA
Trigger: AGCTTTGCCCTCGCCTTGGCAACAGCGGCAATGCCT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGAGCCCTCCTTAAGATaGATCCCAGAGATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLEPSLR*IPEIEA
Trigger: TGCCTCTATCTCTGGGATGCATCTTAAGGAGGGCTC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATTTGAAGAGTCAAGGTaGCCCATGGGACGCACGGTT +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPFEESR*PMGRTV
Trigger: AACCGTGCGTCCCATGGGGCACCTTGACTCTTCAAA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTTTCACCGCGTAGGATaGCGCCCACCCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSFHRVG*RPPWLG
Trigger: GCCCAGCCAGGGTGGGCGGCATCCTACGCGGTGAAA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAATCCCGAATTTGGAGTaGGGAACGTCTGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPIPNLE*GTSGFG
Trigger: CCCAAACCCAGACGTTCCGCACTCCAAATTCGGGAT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAGGTGTAGGGTTCGCTaGAGTTCTGCGAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGRCRVR*SSANCC
Trigger: ACAGCAGTTCGCAGAACTCCAGCGAACCCTACACCT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGGTGGCGATCGGGACTaGTTGGAGGCAATGTTGTTT +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQGGDRD*LEAMLF
Trigger: AAACAACATTGCCTCCAACCAGTCCCGATCGCCACC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGTTCCAGCAGGGTGGTaGAGACGTCTCCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFVPAGW*RRLLQR
Trigger: TCGCTGGAGGAGACGTCTCCACCACCCTGCTGGAAC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGCACCAGCTGCAGGGTaGGCTGGCTCTCGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFAPAAG*AGSRCS
Trigger: TGAGCAACGAGAGCCAGCCCACCCTGCAGCTGGTGC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGCGGGTCCAGGATCATaGCCACCTTGTGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSAGPGS*PPCGPG
Trigger: ACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCACAGCCAAGAACCTaGTCTTGGCCGTTCGAATAT +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLAQPRT*SWPFEY
Trigger: ATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAATCCTCCCCAACGCCTaGTCTCCAAATAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKILPNA*SPNSTA
Trigger: GGCTGTGCTATTTGGAGACCAGGCGTTGGGGAGGAT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGCATCGAGTCGAACATaGCCAAACACCATCCCACCC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKASSRT*PNTIPP
Trigger: GGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCAGGGGGAGAGGGCTGTaGTACAGTGCTTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLRGRGL*YSAFCS
Trigger: ACTACAAAAAGCACTGTACCACAGCCCTCTCCCCCT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAGGGGGAGAGGGCTGTaGTACAGTGCTTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSRGRGL*YSAFCS
Trigger: ACTACAAAAAGCACTGTACCACAGCCCTCTCCCCCT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTCCCTGCTCCTGTCATaGACCCAGGGGGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFSLLLS*TQGERA
Trigger: AGCCCTCTCCCCCTGGGTCCATGACAGGAGCAGGGA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCTGCTCCAGTGTGGATaGCGGCTCTTCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGLLQCG*RLFSDK
Trigger: CTTATCAGAGAAGAGCCGCCATCCACACTGGAGCAG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAGAGAAGAGGGCACCTTaGTACAGCCTTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPEKRAP*YSLSCW
Trigger: CCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTC...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCACCAGGAGATGAACTaGAAGAGCCTGTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLHQEMN*KSLSQS
Trigger: GGATTGAGACAGGCTCTTCCAGTTCATCTCCTGGTG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGTCCTGGGGACCACATaGCTCAAGGTGAGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKVLGTT*LKVSSL
Trigger: GAGACTACTCACCTTGAGCCATGTGGTCCCCAGGAC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGTGCCAAGCAGGATGGTaGCAAAGCTTCCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLCQAGW*QSFLTG
Trigger: ACCAGTGAGGAAGCTTTGCCACCATCCTGCTTGGCA...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTTGCCAAGCAGGATGGTaGCAAAGCTTCCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGCQAGW*QSFLTG
Trigger: ACCAGTGAGGAAGCTTTGCCACCATCCTGCTTGGCA...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGGAACTCCTTCCCGCTaGCCACGCTCAGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSGTPSR*PRSVHP
Trigger: TGGGTGCACTGAGCGTGGTCAGCGGGAAGGAGTTCC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTGCCCAGGATTTCAGTaGCCGAGAAGGCCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFCPGFQ*PRRPHS
Trigger: GCTATGGGGCCTTCTCGGTCACTGAAATCCTGGGCA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGTTCAAGGCACAGGCTaGGCAGCGAAGGCACATGCC +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFVQGTG*AAKAHA
Trigger: GGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAAC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTATGCACCAGCAACAGTaGGTCCGTCACCGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSMHQQQ*VRHRVP
Trigger: TGGAACTCGGTGACGGACTCACTGTTGCTGGTGCAT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCCAATCTGCACACCTaGAAGCGGAGTCTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGANLHT*KRSLLK
Trigger: CTTTAGAAGACTCCGCTTTCAGGTGTGCAGATTGGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGATCCTAAGCCTTCATaGGGTTTGCAATCAACTTTA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWDPKPS*GLQSTL
Trigger: TAAAGTTGATTGCAAACCTCATGAAGGCTTAGGATC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGGAAATGGCCCACTTTaGTCCATTTCAGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLGNGPL*SISVCP
Trigger: TGGACACACTGAAATGGATCAAAGTGGGCCATTTCC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGATATTCCCTAGGAAGTaGCATGAGGTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRIFPRK*HEVPVW
Trigger: CCAGACAGGAACCTCATGTCACTTCCTAGGGAATAT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATCCCCCAAAGGCTTGTaGTGGAAAGACCTACAGTGG +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSPKGL*WKDLQW
Trigger: CCACTGTAGGTCTTTCCATCACAAGCCTTTGGGGGA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGCGAGGGCAAAGCTATaGACTTCGGGCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFARAKL*TSGGSL
Trigger: CAGTGAGCCGCCCGAAGTTCATAGCTTTGCCCTCGC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAACGACTCACTGGCGTaGAGTTGTGGGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSNDSLA*SCGEKK
Trigger: TTTCTTTTCCCCACAACTTCACGCCAGTGAGTCGTT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTCCGTCATCGTTCCTTaGTCGGCACTCAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFSVIVP*SALSEA
Trigger: GGCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTAACACATCCACTGCGTaGAGGTCTCGGTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSNTSTA*RSRCSW
Trigger: CCAAGAGCACCGAGACCTGCACGCAGTGGATGTGTT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGGTTCGCTGGAGTTCTaGGAACTGCTGTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLGSLEF*ELLFVS
Trigger: AGAGACGAACAGCAGTTCGCAGAACTCCAGCGAACC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGTTTTCATTGTCAGCTaGATGGGACTGCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLVFIVS*MGLHVL
Trigger: GAGCACATGCAGTCCCATGCAGCTGACAATGAAAAC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCAGCTCGATGACCTCGTaGATGCTGCGGGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCSSMTS*MLRACS
Trigger: ACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTACAGGCCGCAGCTTCTaGTGCGGGTCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFTGRSF*CGSRIM
Trigger: CATGATCCTGGACCCGCAGCAGAAGCTGCGGCCTGT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGTGTGTGTGCGTGTGTaGAAAGTTTCTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLVCVRV*KVSLAM
Trigger: CATGGCCAGAGAAACTTTGCACACACGCACACACAC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAGCTTTCTGCCAATCTaGACACCTGAAAGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLSFLPI*TPESGV
Trigger: GACTCCGCTTTCAGGTGTGCAGATTGGCAGAAAGCT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAAGGCAGCAGCTCAATaGCCTGAAGGTGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRKAAAQ*PEGEQE
Trigger: TTCTTGTTCACCTTCAGGGCATTGAGCTGCTGCCTT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACAGGATGACAGAAGGTaGCTTTGCAAACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKQDDRR*LCKQPP
Trigger: GGGAGGCTGTTTGCAAAGGCACCTTCTGTCATCCTG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGCTAGAGGGACCTTTTaGTGTAGCATCTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGARGTF*CSICQS
Trigger: TGATTGACAGATGCTACAGCAAAAGGTCCCTCTAGC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGAGAAGAATGCTGAGTaGTCTAAATGCACATCTGGG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFEKNAE*SKCTSG
Trigger: CCCAGATGTGCATTTAGAGCACTCAGCATTCTTCTC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCATTCACATCAAACCTaGAGAGGCAAGCCAACCCCT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGHSHQT*RGKPTP
Trigger: AGGGGTTGGCTTGCCTCTGCAGGTTTGATGTGAATG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCCCCCAGAGAGCATGTaGTATATTCCTAACATCTCT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFPPESM*YIPNIS
Trigger: AGAGATGTTAGGAATATAGCACATGCTCTCTGGGGG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGAGCCCTCCTTAAGATaGATCCCAGAGATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGEPSLR*IPEIEA
Trigger: TGCCTCTATCTCTGGGATGCATCTTAAGGAGGGCTC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTTTGAAGAGTCAAGGTaGCCCATGGGACGCACGGTT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLFEESR*PMGRTV
Trigger: AACCGTGCGTCCCATGGGGCACCTTGACTCTTCAAA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCCTGAAATTGTTGCTTTaGGAGGCTCCCTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLLKLLL*EAPSPE
Trigger: CTCAGGGGAGGGAGCCTCCCAAAGCAACAATTTCAG...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGGTGGCGATCGGGACTaGTTGGAGGCAATGTTGTTT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLGGDRD*LEAMLF
Trigger: AAACAACATTGCCTCCAACCAGTCCCGATCGCCACC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCTGGTTGTACATGCGTaGCAGGTGCTTCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLVVHA*QVLQRQ
Trigger: CTGGCGCTGAAGCACCTGCCACGCATGTACAACCAG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAACTTTCACCTTCACCTaGTTGTACATGCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQTFTFT*LYMRGR
Trigger: CCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCCAACACTCTGGGAGTaGCAGGTGACACCGATGCCT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFPTLWE*QVTPMP
Trigger: AGGCATCGGTGTCACCTGCCACTCCCAGAGTGTTGG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGTTTATTCATATCTTCTaGACTGAGCAGCCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRFIHIF*TEQPPP
Trigger: CGGAGGCGGCTGCTCAGTCCAGAAGATATGAATAAA...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCCCATCTGATGCAGTGTaGAGAGTCCACAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLPSDAV*RVHSRA
Trigger: TGCTCTGCTGTGGACTCTCCACACTGCATCAGATGG...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCACAGCCAAGAACCTaGTCTTGGCCGTTCGAATAT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGAQPRT*SWPFEY
Trigger: ATATTCGAACGGCCAAGACCAGGTTCTTGGCTGTGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGAAGCCTCAGGGTCCTaGGAAGTGAGGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFEASGS*EVRRGC
Trigger: ACAGCCTCTCCTCACTTCCCAGGACCCTGAGGCTTC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTCCCTGCTCCTGTCATaGACCCAGGGGGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSSLLLS*TQGERA
Trigger: AGCCCTCTCCCCCTGGGTCCATGACAGGAGCAGGGA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGAGACCACAGTTTGCTaGAGCAAATGTGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSETTVC*SKCGNG
Trigger: GCCATTTCCACATTTGCTCCAGCAAACTGTGGTCTC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCATGAGGTTCCTGTCTaGATTTCTCCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGHEVPV*ISPCSC
Trigger: GCAGGAACAGGGAGAAATCCAGACAGGAACCTCATG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGATCAAATCTCTTCCTaGAGGACAGACATCCCATGC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSDQISS*RTDIPC
Trigger: GCATGGGATGTCTGTCCTCCAGGAAGAGATTTGATC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCTGCAGTTCTTGGCTTaGGCTTTGTTGGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLQFLA*ALLVKQ
Trigger: TTGCTTCACCAACAAAGCCCAAGCCAAGAACTGCAG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACTTGCCAGGAAACCCTaGTACCCTTTTTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQLARKP*YPFSSQ
Trigger: TTGGCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGGGGAGTGTCCCCAATaGAGCCATCTCACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFGECPQ*SHLTGC
Trigger: ACAGCCTGTGAGATGGCTCCATTGGGGACACTCCCC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGTCATCTGTGCCAACCTaGAATTCAGGAAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLSSVPT*NSGSAT
Trigger: TGTGGCGCTTCCTGAATTCCAGGTTGGCACAGATGA...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATCATCTGTGCCAACCTaGAATTCAGGAAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPSSVPT*NSGSAT
Trigger: TGTGGCGCTTCCTGAATTCCAGGTTGGCACAGATGA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCTATCACATGTGTACCTaGAATTGTTGCTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGYHMCT*NCCFGR
Trigger: CCTCCCAAAGCAACAATTTCAGGTACACATGTGATA...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACAGATCTCAGCTGCCTaGACATTTCACAACATCAGC +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPQISAA*TFHNIS
Trigger: GCTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCGAATATGTGAAAACTaGACTGTACAGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSRICEN*TVQGRP
Trigger: TGGCCTTCCCTGTACAGTTCAGTTTTCACATATTCG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGGCCGTTCGAATATGTaGAAACTGAACTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGGRSNM*KLNCTG
Trigger: CCCTGTACAGTTCAGTTTTCACATATTCGAACGGCC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGGCCGTTCGAATATGTaGAAACTGAACTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLGRSNM*KLNCTG
Trigger: CCCTGTACAGTTCAGTTTTCACATATTCGAACGGCC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGATGTGACTATGGGCTaGCTTCGGAGTCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFDVTMG*LRSRCG
Trigger: TCCACAGCGACTCCGAAGTCAGCCCATAGTCACATC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCTGGGTGAGTTCTCATaGGGCAAAGTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSLGEFS*GKVCRL
Trigger: AAGCCTGCACACTTTGCCTCATGAGAACTCACCCAG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGCAACTGACCTCAGATaGGGGAGAAAAACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLATDLR*GRKTCQ
Trigger: CTGGCAAGTTTTTCTCCCTCATCTGAGGTCAGTTGC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCTCAGATGTCAAGTGTaGAGCTGCCAAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSLRCQV*SCQAGW
Trigger: CCATCCTGCTTGGCAGCTTCACACTTGACATCTGAG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGATAAAGGGTCAAACTaGAAGAGATGTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFDKGSN*KRCLFP
Trigger: TGGGAAGAGACATCTCTTTCAGTTTGACCCTTTATC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGGTGGTTGTACAAAATaGTTTCCTGATGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGGGCTK*FPDAWD
Trigger: ATCCCAAGCATCAGGAAATCATTTTGTACAACCACC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAAGATTTACCTGATGTaGACGACTCACTGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSKIYLM*TTHWRE
Trigger: TTCACGCCAGTGAGTCGTTCACATCAGGTAAATCTT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAAGATTTACCTGATGTaGACGACTCACTGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRKIYLM*TTHWRE
Trigger: TTCACGCCAGTGAGTCGTTCACATCAGGTAAATCTT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTTCTCAAGATTTACCTaGTGTGAACGACTCACTGGC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLFSRFT*CERLTG
Trigger: GCCAGTGAGTCGTTCACATCAGGTAAATCTTGAGAA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGGAGACCTCTGGATGTaGACACTCAGAGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCGDLWM*TLRARV
Trigger: GACACGGGCTCTGAGTGTTCACATCCAGAGGTCTCC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR GCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACCTTTTCGGGGATCATaGTGTTGGGTGTTAAACCAC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQPFRGS*CWVLNH
Trigger: GTGGTTTAACACCCAACAGCATGATCCCCGAAAAGG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACCTTTTCGGGGATCATaGTGTTGGGTGTTAAACCAC +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPPFRGS*CWVLNH
Trigger: GTGGTTTAACACCCAACAGCATGATCCCCGAAAAGG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCCTCAACAGCCGCTCTaGGATGTTCTGCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCPQQPL*DVLPLL
Trigger: AAGGAGCGGCAGAACATCGCAGAGCGGCTGTTGAGG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTGCCTAGGCAGGCATTaGTGCCCAAGGCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFCLGRH*CPRHRS
Trigger: TGACCTGTGCCTTGGGCAGCAATGCCTGCCTAGGCA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTTGCTCAGCACGCTCTaGACCACCGAGTTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLLSTL*TTEFKA
Trigger: TGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCAGCTCGATGACTGCCTaGTTCACCGGCGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCSSMTA*FTGVRM
Trigger: CATCCTGACGCCGGTGAAGCAGGCAGTCATCGAGCT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCGTACACTTCATTTTTaGCTAGCCGATCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRTLHF*LADHLP
Trigger: AGGAAGATGATCGGCTAGGCAAAAATGAAGTGTACG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAGCTTTCTGCCAATCTaGACACCTGAAAGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSFLPI*TPESGV
Trigger: GACTCCGCTTTCAGGTGTGCAGATTGGCAGAAAGCT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCAGAAACAAAGTCCAGTaGAGAAACCGTCCATCTGAT +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGRNKVQ*RNRPSD
Trigger: ATCAGATGGACGGTTTCTGCACTGGACTTTGTTTCT...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGAGGGAACCAGAGGTTaGAAGAAACAATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFREGTRG*KKQSSA
Trigger: AGCAGATGATTGTTTCTTGCAACCTCTGGTTCCCTC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGACAACCCTCAACGCTaGAGTTCTTGGCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSDNPQR*SSWLGL
Trigger: AAGCCCAAGCCAAGAACTGCAGCGTTGAGGGTTGTC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGGAAGTGGAGAACTGTaGCAGAACAAAGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLGSGEL*QNKGIH
Trigger: GTGGATGCCTTTGTTCTGGCACAGTTCTCCACTTCC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGGAAGTGGAGAACTGTaGCAGAACAAAGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKGSGEL*QNKGIH
Trigger: GTGGATGCCTTTGTTCTGGCACAGTTCTCCACTTCC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTAGGCATTGCCGCTGTTaGCAAGGCGAGGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFRHCRC*QGEGKA
Trigger: AGCTTTGCCCTCGCCTTGGCAACAGCGGCAATGCCT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGAAAGGATGCGGGGGTaGACGCACGTGGTTACTGAG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFERMRG*THVVTE
Trigger: CTCAGTAACCACGTGCGTGCACCCCCGCATCCTTTC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCACCTTGGTGCTCTTCTaGCTGCGCTTCAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCTLVLF*LRFKRS
Trigger: GGAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATCATTGTCAGCTGCATaGGACTGCATGTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSLSAA*DCMCSN
Trigger: GTTGGAGCACATGCAGTCCCATGCAGCTGACAATGA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTCAGGGCCAACACTCTaGGAGTGGCAGGTGACACCG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSSGPTL*EWQVTP
Trigger: CGGTGTCACCTGCCACTCCCAGAGTGTTGGCCCTGA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTACGTTCTGCACCCAGTaGTGCACAAGGTCACCGCTG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFTFCTQ*CTRSPL
Trigger: CAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGCCAGAAGGCGAGCTTaGCGAGTTTTGTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLARRRA*RVLCAF
Trigger: AAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTTTCAAGGGGAGAGCTaGGTGAGTTCTCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLFQGES*VSSHEA
Trigger: TGCCTCATGAGAACTCACCCAGCTCTCCCCTTGAAA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGTTGCTGGAGCAAATGTaGAAATGGCCCACTTTGATC +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRLLEQM*KWPTLI
Trigger: GATCAAAGTGGGCCATTTCCACATTTGCTCCAGCAA...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGAGACCACAGTTTGCTaGAGCAAATGTGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQETTVC*SKCGNG
Trigger: GCCATTTCCACATTTGCTCCAGCAAACTGTGGTCTC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACATGAGGTTCCTGTCTaGATTTCTCCCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKHEVPV*ISPCSC
Trigger: GCAGGAACAGGGAGAAATCCAGACAGGAACCTCATG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTATTTTCTAATCAACTaGCCCAATAATGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWYFLIN*PNNGAS
Trigger: TGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTTTCTGAGTACCCAGTaGCATTCACATCAAACCTGC +
Preference number: 4 (lower is better)
Translates to: RCLFPACTPGGFLESWRLFLSTQ*HSHQTC
Trigger: GCAGGTTTGATGTGAATGCCACTGGGTACTCAGAAA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTTTCTGAGTACCCAGTaGCATTCACATCAAACCTGC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSFLSTQ*HSHQTC
Trigger: GCAGGTTTGATGTGAATGCCACTGGGTACTCAGAAA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTATCTTGTTATCTAACTaGACAAGGCAGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGILLSN*TRQPQR
Trigger: CCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGAT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGCAGTTTTGCTCAGGTaGCATGTGTTTTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSAVLLR*HVFCFL
Trigger: CAGGAAACAAAACACATGCCACCTGAGCAAAACTGC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCATCGCTCAGCTTTCCTaGCACGCCCAGTTCAATGCA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFIAQLS*HAQFNA
Trigger: TGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGAT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCAGAAACCGTCCATCTaGTGCAGTGTGGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFQKPSI*CSVESP
Trigger: TGGACTCTCCACACTGCATCAGATGGACGGTTTCTG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGTTAAGTCTCCTTTCCTaGTTTGGGGAGATAGATAGG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRLSLLS*FGEIDR
Trigger: CCTATCTATCTCCCCAAATCAGGAAAGGAGACTTAA...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAAGACTGTAGGATACTaGGTACACCACAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLKTVGY*VHHRDE
Trigger: CTCATCTCTGTGGTGTACTCAGTATCCTACAGTCTT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGAGGTGTGGTGGATGTaGCTATGGGCTGACTTCGGA +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCEVWWM*LWADFG
Trigger: TCCGAAGTCAGCCCATAGTCACATCCACCACACCTC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGAGGTATCTCACAGTTaGGTGATGCTTTATTATTGG +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFEVSHS*VMLYYW
Trigger: CCAATAATAAAGCATCACTCAACTGTGAGATACCTC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGATCCTAAGCCTTCATaGGGTTTGCAATCAACTTTA +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFDPKPS*GLQSTL
Trigger: TAAAGTTGATTGCAAACCTCATGAAGGCTTAGGATC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCATCATAAAGTCTGCTaGTGTTTCTTCCCATATTCC +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFHHKVC*CFFPYS
Trigger: GGAATATGGGAAGAAACATCAGCAGACTTTATGATG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCAGCCTTTCCTGTTGGTaGCACCAGTTTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCSLSCW*HQFPEG
Trigger: TCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCAGTGGCTGGACCTGTaGGATCTTTGGGTTTTATTA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLQWLDL*DLWVLL
Trigger: TAATAAAACCCAAAGATCTCACAGGTCCAGCCACTG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACAGTGGCTGGACCTGTaGGATCTTTGGGTTTTATTA +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPQWLDL*DLWVLL
Trigger: TAATAAAACCCAAAGATCTCACAGGTCCAGCCACTG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCTCAGATGTCAAGTGTaGAGCTGCCAAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLRCQV*SCQAGW
Trigger: CCATCCTGCTTGGCAGCTTCACACTTGACATCTGAG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTACCTGGTGGCTTCCTTaGATCCTGGAGACTCACAGC +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFTWWLP*ILETHS
Trigger: GCTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTCTCTGTACAAGAATTaGCTCTTTAAAGCGACACCC +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSSLYKN*LFKATP
Trigger: GGGTGTCGCTTTAAAGAGTCAATTCTTGTACAGAGA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCAACACATCCACTGCGTaGAGGTCTCGGTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCNTSTA*RSRCSW
Trigger: CCAAGAGCACCGAGACCTGCACGCAGTGGATGTGTT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAGTACTTGTACTGTTTaGCGCAGAATTCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSSTCTV*RRIHRC
Trigger: ACACCTGTGAATTCTGCGGCAAACAGTACAAGTACT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTCAGCTGCATGGGACTaGATGTGCTCCAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSAAWD*MCSNRL
Trigger: CAACCTGTTGGAGCACATGCAGTCCCATGCAGCTGA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCTAGGCAGGCATTGCTaGCCAAGGCACAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFLGRHC*PRHRSL
Trigger: AAGTGACCTGTGCCTTGGGCAGCAATGCCTGCCTAG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTTCTGCACCCAGTGGTaGACAAGGTCACCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSFCTQW*TRSPLS
Trigger: CGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTTGGCGAGTTTTGTGTaGTTTTGGGTAACGCACGAC +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLLASFV*FWVTHD
Trigger: GTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCACTTCAGATCTCAGCTaGCTGAACATTTCACAACAT +
Preference number: 4 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFTSDLS*LNISQH
Trigger: ATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAAGGCAGCAGCTCAATaGCCTGAAGGTGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKKAAAQ*PEGEQE
Trigger: TTCTTGTTCACCTTCAGGGCATTGAGCTGCTGCCTT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGAACTCCCAAACCACTaGTTCCCCTACGGCCACCAA +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFELPNH*FPYGHQ
Trigger: TTGGTGGCCGTAGGGGAAGCAGTGGTTTGGGAGTTC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCATTTCTCCCTGTTCCTaGTCCAGTGTGGATGGCGGC +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCISPCS*SSVDGG
Trigger: GCCGCCATCCACACTGGAGCAGGAACAGGGAGAAAT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAAGTGCAGGCAGTTTTaGTCAGGTGGCATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGKCRQF*SGGMCF
Trigger: AAAACACATGCCACCTGAGCAAAACTGCCTGCACTT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAGACCTCATCATCTGTaGCAACCTGGAATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGRPHHL*QPGIQE
Trigger: TTCCTGAATTCCAGGTTGGCACAGATGATGAGGTCT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCCAAGAACCTGGTCTTaGCCGTTCGAATATGTGAAA +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGPRTWS*PFEYVK
Trigger: TTTCACATATTCGAACGGCCAAGACCAGGTTCTTGG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGCTCAGTCCCCCAGTTaGAAATGTTGTGGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLAQSPS*KCCGGN
Trigger: ATTACCTCCACAACATTTCCAACTGGGGGACTGAGC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGGACCTGAGATTCCTTaGGCTACTCCACTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSGPEIP*ATPLRG
Trigger: CCCTCGGAGTGGAGTAGCCCAAGGAATCTCAGGTCC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCCAGGAATCGGGAAGTaGAGAACTGTGCCAGAACAA +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSPGIGK*RTVPEQ
Trigger: TTGTTCTGGCACAGTTCTCCACTTCCCGATTCCTGG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCTTGCCAGGAAACCCTaGTACCCTTTTTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSLARKP*YPFSSQ
Trigger: TTGGCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTTGGCATCAACCAACTaGGAAATAGTGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLASTN*EIVLQE
Trigger: TTCTTGCAGCACTATTTCCCAGTTGGTTGATGCCAA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 72 bp GTGCAGCGAACCTCCAGAGATGAAGTGCAGGCAGTTTaGCTCAGGTGGCATGTGTTTTGTTTCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: VQRTSRDEVQAV*LRWHVFCFLVT
Trigger: AGTAACCAGGAAACAAAACACATGCCACCTGAGCAAAACTGCCTGCACTTCATCTCTGGAGGTTCGCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAATATCACATGTGTACCTaGAATTGTTGCTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQYHMCT*NCCFGR
Trigger: CCTCCCAAAGCAACAATTTCAGGTACACATGTGATA...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCTGTTCCTCTGGGCCTaGGGTTTCCACTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFLFLWA*GFHFSS
Trigger: AGAAGAGAAGTGGAAACCTCAGGCCCAGAGGAACAG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCAGATCTCAGCTGCCTaGACATTTCACAACATCAGC +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSQISAA*TFHNIS
Trigger: GCTGATGTTGTGAAATGTTCAGGCAGCTGAGATCTG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTGGCCATTCTCAGCTTaGAGCCTTAGTGTAACCACC +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFWPFSA*SLSVTT
Trigger: GGTGGTTACACTAAGGCTTCAAGCTGAGAATGGCCA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGGAAATGGCCCACTTTaGTCCATTTCAGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSGNGPL*SISVCP
Trigger: TGGACACACTGAAATGGATCAAAGTGGGCCATTTCC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTGGCATGGTAGTTCCTaGGACCACAGTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFWHGSS*DHSLLE
Trigger: CTCCAGCAAACTGTGGTCTCAGGAACTACCATGCCA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACCAACCCCTAAGTATTaGATTGAGGTGGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WRLTASHLCHCTALLSLPPTPKY*IEVEKK
Trigger: CTTCTTTTCCACCTCAATTCAATACTTAGGGGTTGG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACCAACCCCTAAGTATTaGATTGAGGTGGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQPTPKY*IEVEKK
Trigger: CTTCTTTTCCACCTCAATTCAATACTTAGGGGTTGG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGATAAAGGGTCAAACTaGAAGAGATGTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQDKGSN*KRCLFP
Trigger: TGGGAAGAGACATCTCTTTCAGTTTGACCCTTTATC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTTCTCAAGATTTACCTaGTGTGAACGACTCACTGGC +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLFSRFT*CERLTG
Trigger: GCCAGTGAGTCGTTCACATCAGGTAAATCTTGAGAA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCTTCTACTCTCCGACTaGAAGCGCTTTCTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFLLLSD*KRFLRL
Trigger: CAACCGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR GCA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAATACTTGTACTTCTTaGCACAGATTCCGCATTCGT +
Preference number: 4 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSNTCTS*HRFRIR
Trigger: ACGAATGCGGAATCTGTGGCAAGAAGTACAAGTATT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTTTCAAAGTGGTTTTGTaGTTTGCCTTCTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGFKVVL*FAFYSP
Trigger: CGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAA...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTGGAGTTCTGCGAACTaGTGTTCGTCTCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLWSSAN*CSSLQS
Trigger: ACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCACGTGTTCAGACACGTaGACACACGTGTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCTCSDT*THVWLC
Trigger: ACACAGCCACACGTGTGTGCACGTGTCTGAACACGT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCACACGCCCAGTTCAATaGACACCCGTCCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSTRPVQ*TPVQAQ
Trigger: CTGTGCTTGGACGGGTGTGCATTGAACTGGGCGTGT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGACAGAAGGTGCCTTTaGAAACAGCCTCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSDRRCL*KQPPAM
Trigger: CATGGCGGGAGGCTGTTTGCAAAGGCACCTTCTGTC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGCTAGAGGGACCTTTTaGTGTAGCATCTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKARGTF*CSICQS
Trigger: TGATTGACAGATGCTACAGCAAAAGGTCCCTCTAGC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTTGTGTGGGTCAAAGTaGCGGTCACTGTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSLCGSK*RSLSLP
Trigger: GGGAAGGGACAGTGACCGGCACTTTGACCCACACAA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGAGGGAACCAGAGGTTaGAAGAAACAATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKEGTRG*KKQSSA
Trigger: AGCAGATGATTGTTTCTTGCAACCTCTGGTTCCCTC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTCATTGTCAGCTGCATaGGACTGCATGTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSLSAA*DCMCSN
Trigger: GTTGGAGCACATGCAGTCCCATGCAGCTGACAATGA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCTTCTACAACAGCAGGTaGCGATCGGGACTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCFYNSR*RSGLVG
Trigger: TCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAA...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCTGTCTACTAAGGTCTaGGCCAACTTCAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLSTKV*ANFRNS
Trigger: GGAGTTCCTGAAGTTGGCCCAGACCTTAGTAGACAG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCCATCTGATGCAGTGTaGAGAGTCCACAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFPSDAV*RVHSRA
Trigger: TGCTCTGCTGTGGACTCTCCACACTGCATCAGATGG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTTTCAAGGGGAGAGCTaGGTGAGTTCTCATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFFQGES*VSSHEA
Trigger: TGCCTCATGAGAACTCACCCAGCTCTCCCCTTGAAA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGCTCCTATCCTTGTGTaGGTCAAAGTGCCGGTCACT +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFAPILV*VKVPVT
Trigger: AGTGACCGGCACTTTGACCCACACAAGGATAGGAGC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCTATTTTCTAATCAACTaGCCCAATAATGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGYFLIN*PNNGAS
Trigger: TGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTCAGTGGACCCAGAACTaGGAGGCAGACGACAAAATC +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFQWTQN*EADDKI
Trigger: GATTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTG...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCTCACGTACACTGTCCTaGTCTCCGACATCACGAACT +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCSRTLS*SPTSRT
Trigger: AGTTCGTGATGTCGGAGATCAGGACAGTGTACGTGA...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACATCATAAAGTCTGCTaGTGTTTCTTCCCATATTCC +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQHHKVC*CFFPYS
Trigger: GGAATATGGGAAGAAACATCAGCAGACTTTATGATG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCAGAGGACAGCTTTCTaGGTACCCAGTGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSQRTAF*VPSGIH
Trigger: GTGAATGCCACTGGGTACTCAGAAAGCTGTCCTCTG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCATCGTGATGACAAGATaGGGGGAGTGTCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSIVMTR*GECPQW
Trigger: CCATTGGGGACACTCCCCTCATCTTGTCATCACGAT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAACGACTCACTGGCGTaGAGTTGTGGGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFNDSLA*SCGEKK
Trigger: TTTCTTTTCCCCACAACTTCACGCCAGTGAGTCGTT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATTCAAAGTGGTTTTGTaGTTTGCCTTCTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKFKVVL*FAFYSP
Trigger: CGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCATCAACTTTACTCCCTaGTCCTGTCATGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCINFTP*SCHGPR
Trigger: CCTGGGTCCATGACAGGAGCAGGGAGTAAAGTTGAT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAGCCTTCATGAGGTTTaGAATCAACTTTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSLHEV*NQLYSL
Trigger: CAGGGAGTAAAGTTGATTGCAAACCTCATGAAGGCT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAGTTGCAGCAGGATTTaGACTCTGAGAACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSCSRI*TLRTAC
Trigger: ACAGGCTGTTCTCAGAGTGCAAATCCTGCTGCAACT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGCTCAGTCCCCCAGTTaGAAATGTTGTGGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFAQSPS*KCCGGN
Trigger: ATTACCTCCACAACATTTCCAACTGGGGGACTGAGC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGTATTGAATTGAGGTaGAAAAGAAGTGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRSIELR*KRSERE
Trigger: CTCCCTTTCACTTCTTTTCCACCTCAATTCAATACT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCAGTGGACCCAGAACTaGGAGGCAGACGACAAAATC +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSQWTQN*EADDKI
Trigger: GATTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCTGCAGTTCTTGGCTTaGGCTTTGTTGGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLQFLA*ALLVKQ
Trigger: TTGCTTCACCAACAAAGCCCAAGCCAAGAACTGCAG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTTATCTCTGCTTCGGGTaGTTGTACAAAATGATTTCC +
Preference number: 4 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGYLCFG*LYKMIS
Trigger: GGAAATCATTTTGTACAACCACCCGAAGCAGAGATA...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCCTTCCTCTTCTCCCTaGGAATGTTCCACTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFPSSSP*ECSTFG
Trigger: TCCAAAAGTGGAACATTCCCAGGGAGAAGAGGAAGG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGTCTGAAGAAACAAAATaGACCCCCAAACAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLSEETK*TPKQGK
Trigger: TTTACCTTGTTTGGGGGTTCATTTTGTTTCTTCAGA...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAGTACACCACAGAGATaGGCTAGTTTACAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSTPQR*ASLQCD
Trigger: GTCACACTGTAAACTAGCTCATCTCTGTGGTGTACT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAATATCTCACAGTTGAGTaGTGCTTTATTATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQYLTVE*CFIIGK
Trigger: CTTCCCAATAATAAAGCATCACTCAACTGTGAGATA...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTATATTCCCTAGGAAGTaGCATGAGGTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFIFPRK*HEVPVW
Trigger: CCAGACAGGAACCTCATGTCACTTCCTAGGGAATAT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGCAACTGACCTCAGATaGGGGAGAAAAACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSATDLR*GRKTCQ
Trigger: CTGGCAAGTTTTTCTCCCTCATCTGAGGTCAGTTGC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTGGAGTTCTGCGAACTaGTGTTCGTCTCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFWSSAN*CSSLQS
Trigger: ACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGTTTTCATTGTCAGCTaGATGGGACTGCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCVFIVS*MGLHVL
Trigger: GAGCACATGCAGTCCCATGCAGCTGACAATGAAAAC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCGTACACTTCATTTTTaGCTAGCCGATCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSRTLHF*LADHLP
Trigger: AGGAAGATGATCGGCTAGGCAAAAATGAAGTGTACG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCATCAACTTTACTCCCTaGTCCTGTCATGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSINFTP*SCHGPR
Trigger: CCTGGGTCCATGACAGGAGCAGGGAGTAAAGTTGAT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGCGATCGGGACTGGTTaGAGGCAATGTTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFAIGTG*RQCCFH
Trigger: ATGAAAACAACATTGCCTCCAACCAGTCCCGATCGC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCTGTCTACTAAGGTCTaGGCCAACTTCAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSLSTKV*ANFRNS
Trigger: GGAGTTCCTGAAGTTGGCCCAGACCTTAGTAGACAG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCACTTTCACCTTCACCTaGTTGTACATGCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSTFTFT*LYMRGR
Trigger: CCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCTTTATTCATATCTTCTaGACTGAGCAGCCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCFIHIF*TEQPPP
Trigger: CGGAGGCGGCTGCTCAGTCCAGAAGATATGAATAAA...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAAGTATTGAATTGAGGTaGAAAAGAAGTGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQSIELR*KRSERE
Trigger: CTCCCTTTCACTTCTTTTCCACCTCAATTCAATACT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCATCTTGTTATCTAACTaGACAAGGCAGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCILLSN*TRQPQR
Trigger: CCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGAT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGGCTTCCTTGAATCCTaGAGACTCACAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFGFLES*RLTASH
Trigger: ATGAGAAGCTGTGAGTCTCCAGGATTCAAGGAAGCC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCCTTCCTCTTCTCCCTaGGAATGTTCCACTTTTGGA +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCPSSSP*ECSTFG
Trigger: TCCAAAAGTGGAACATTCCCAGGGAGAAGAGGAAGG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGTAATTGCCAGTTTTTaGCCCGATTTTCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSVIASF*PDFLEW
Trigger: CCATTCCAGAAAATCGGGCCAAAAACTGGCAATTAC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615615.4
3UTR CAA 72 bp GGAACCAGAGGTTGCAAGAAACAATCATCTGCTATCTaGTTATCTAACTGGACAAGGCAGCCCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: GTRGCKKQSSAI*LSNWTRQPQRT
Trigger: TGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGATTGTTTCTTGCAACCTCTGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATCTGAAGAAACAAAATaGACCCCCAAACAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKSEETK*TPKQGK
Trigger: TTTACCTTGTTTGGGGGTTCATTTTGTTTCTTCAGA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCAGTACACCACAGAGATaGGCTAGTTTACAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCSTPQR*ASLQCD
Trigger: GTCACACTGTAAACTAGCTCATCTCTGTGGTGTACT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCAGGAGAGAAAAGCCTaGAGACATCTTTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCQERKA*RHLSQH
Trigger: ATGCTGTGAAAGATGTCTTCAGGCTTTTCTCTCCTG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGAGGTATCTCACAGTTaGGTGATGCTTTATTATTGG +
Preference number: 4 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSEVSHS*VMLYYW
Trigger: CCAATAATAAAGCATCACTCAACTGTGAGATACCTC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCCCCCAGAGAGCATGTaGTATATTCCTAACATCTCT +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCPPESM*YIPNIS
Trigger: AGAGATGTTAGGAATATAGCACATGCTCTCTGGGGG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCCAAGAACCTGGTCTTaGCCGTTCGAATATGTGAAA +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCPRTWS*PFEYVK
Trigger: TTTCACATATTCGAACGGCCAAGACCAGGTTCTTGG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTTGGCATCAACCAACTaGGAAATAGTGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLASTN*EIVLQE
Trigger: TTCTTGCAGCACTATTTCCCAGTTGGTTGATGCCAA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
3UTR CAA 72 bp GAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTaGGGTTTTATTAAGCTGTTAGTTGCAGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: EIKGPVAGPVRS*GFIKLLVAAGF
Trigger: AAATCCTGCTGCAACTAACAGCTTAATAAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCAAGACTGTAGGATACTaGGTACACCACAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSKTVGY*VHHRDE
Trigger: CTCATCTCTGTGGTGTACTCAGTATCCTACAGTCTT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTCTCTGTACAAGAATTaGCTCTTTAAAGCGACACCC +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFSLYKN*LFKATP
Trigger: GGGTGTCGCTTTAAAGAGTCAATTCTTGTACAGAGA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAATACTTGTACTTCTTaGCACAGATTCCGCATTCGT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFNTCTS*HRFRIR
Trigger: ACGAATGCGGAATCTGTGGCAAGAAGTACAAGTATT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCACTTCAGATCTCAGCTaGCTGAACATTTCACAACAT +
Preference number: 4 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFTSDLS*LNISQH
Trigger: ATGTTGTGAAATGTTCAGGCAGCTGAGATCTGAAGT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTAGCCTTCATGAGGTTTaGAATCAACTTTACTCCCTG +
Preference number: 4 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFSLHEV*NQLYSL
Trigger: CAGGGAGTAAAGTTGATTGCAAACCTCATGAAGGCT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGAGAAGAATGCTGAGTaGTCTAAATGCACATCTGGG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSEKNAE*SKCTSG
Trigger: CCCAGATGTGCATTTAGAGCACTCAGCATTCTTCTC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCAAGTGCAGGCAGTTTTaGTCAGGTGGCATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSKCRQF*SGGMCF
Trigger: AAAACACATGCCACCTGAGCAAAACTGCCTGCACTT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCTATCTCTGCTTCGGGTaGTTGTACAAAATGATTTCC +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCYLCFG*LYKMIS
Trigger: GGAAATCATTTTGTACAACCACCCGAAGCAGAGATA...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR TCA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCTATCTCACAGTTGAGTaGTGCTTTATTATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCYLTVE*CFIIGK
Trigger: CTTCCCAATAATAAAGCATCACTCAACTGTGAGATA...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGTTATAGACATTCAGTaGCTCCTAGCAGAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSVIDIQ*LLAESK
Trigger: TTTAGACTCTGCTAGGAGGCACTGAATGTCTATAAC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR GCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCATTCACAGGTGTAATTaGCAGTTTTTGGCCCGATTT +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSIHRCN*QFLARF
Trigger: AAATCGGGCCAAAAACTGGCAATTACACCTGTGAAT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CCA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTGTAATATTGTTCATTaGCCCGATTTTCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: YFLINWPNNGASPAQLCSCNIVH*PDFLEW
Trigger: CCATTCCAGAAAATCGGGCCAATGAACAATATTACA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288466.11
CDS TCA 90 bp GCCCGTGTCTGGATCATCCGGTGGCTCCCACCCGGGGGCAGTACCTaGGAGGGTCACGCTCTCAGTCCCCGAGGGCCCTCCCAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: ARVWIIRWLPPGGST*EGHALSPRGPSQPA
Trigger: TGCCGGCTGGGAGGGCCCTCGGGGACTGAGAGCGTGACCCTCTCAGGTACTGCCCCCGGGTGGGAGCCACCGGATGATCCAGACACGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS TCA 90 bp GAGGGTCACGCTCTCAGTCCCCGAGGGCCCTCCCAGCCGGCAGAGTaGGTGGCCTCTCGGGCCACCAGCCCCACATTCCAGGGTTGGGAC +
Preference number: 5 (lower is better)
Translates to: EGHALSPRGPSQPAE*VASRATSPTFQGWD
Trigger: GTCCCAACCCTGGAATGTGGGGCTGGTGGCCCGAGAGGCCACTCACTCTGCCGGCTGGGAGGGCCCTCGGGGACTGAGAGCGTGACCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CCA 90 bp CTTCCTGAGCTGCGGGGTTCTCGACGGCAGCAGAGCGGGGCTTCTTaGCAGCGGGCTCGAAGTCGGCCTCCTCGGCCCAGGACTCCTTCA +
Preference number: 5 (lower is better)
Translates to: LPELRGSRRQQSGAS*QRARSRPPRPRTPS
Trigger: TGAAGGAGTCCTGGGCCGAGGAGGCCGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTGCTGCCGTCGAGAACCCCGCAGCTCAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp GAGCCCGCCAGGTCCTCGCACACGTTGAGCAGCTCGATGACCTCGTaGATGCTGCGGGCCTGCAGTGTCCGCTTGCTCAGCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: EPARSSHTLSSSMTS*MLRACSVRLLSTLC
Trigger: GCAGAGCGTGCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCTGGCGGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 90 bp CGTTCCTTGCTCGGCACTCAGCGAGGCCTCGGCTGGCACTGGCTCTaGGCCCTCCACCTTGGTGCTCTTCTGGCTGCGCTTCAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: RSLLGTQRGLGWHWL*ALHLGALLAALQAL
Trigger: GAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTGAGTGCCGAGCAAGGAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS GCA 90 bp TCAGCGAGGCCTCGGCTGGCACTGGCTCTGGGCCCTCCACCTTGGTaGTCTTCTGGCTGCGCTTCAAGCGCTCCCTGCTCGCAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SARPRLALALGPPPW*SSGCASSAPCSQCF
Trigger: AAAGCACTGCGAGCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS GCA 90 bp CACCAGCTGCAGGGTGGGCTGGCTCTCGTTGCTCAGCTCGATGACTaGCTGCTTCACCGGCGTCAGGATGGCCGCCAGGTTGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: HQLQGGLALVAQLDD*LLHRRQDGRQVAEQ
Trigger: CTGCTCAGCAACCTGGCGGCCATCCTGACGCCGGTGAAGCAGGCAGTCATCGAGCTGAGCAACGAGAGCCAGCCCACCCTGCAGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 90 bp CCGCTTGCTCAGCACGCTCTGCACCACCGAGTTCAAGGCACAGGCTaGGCAGCGAAGGCACATGCCGGCCTTGGAGAAGGCGGACGTGCT +
Preference number: 5 (lower is better)
Translates to: PLAQHALHHRVQGTG*AAKAHAGLGEGGRA
Trigger: AGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp TCATCGGGCAGCTCTGTCTTCACCTTCACCTCCGTCATCGTTCCTTaGTCGGCACTCAGCGAGGCCTCGGCTGGCACTGGCTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SSGSSVFTFTSVIVP*SALSEASAGTGSGP
Trigger: GGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGAGGTGAAGGTGAAGACAGAGCTGCCCGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CCA 90 bp CGTCATCGTTCCTTGCTCGGCACTCAGCGAGGCCTCGGCTGGCACTaGCTCTGGGCCCTCCACCTTGGTGCTCTTCTGGCTGCGCTTCAA +
Preference number: 5 (lower is better)
Translates to: RHRSLLGTQRGLGWH*LWALHLGALLAALQ
Trigger: TTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTGAGTGCCGAGCAAGGAACGATGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS GCA 90 bp TCTGCACCACCGAGTTCAAGGCACAGGCTGAGCAGCGAAGGCACATaGCGGCCTTGGAGAAGGCGGACGTGCTCACCCGGCAATCCGTCA +
Preference number: 5 (lower is better)
Translates to: SAPPSSRHRLSSEGT*RPWRRRTCSPGNPS
Trigger: TGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGGTGGTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp CCGAATTTGGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTaGGGTGTAAGAGGGTGGCACATCGGACCACGGAGGCCGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PNLECGTSGFGWLEG*GVRGWHIGPRRPEL
Trigger: AAGCTCCGGCCTCCGTGGTCCGATGTGCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 90 bp CCGAGTTCAAGGCACAGGCTGAGCAGCGAAGGCACATGCCGGCCTTaGAGAAGGCGGACGTGCTCACCCGGCAATCCGTCACGTACACTG +
Preference number: 5 (lower is better)
Translates to: PSSRHRLSSEGTCRP*RRRTCSPGNPSRTL
Trigger: CAGTGTACGTGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 90 bp GCCGGGTGCACCTTGAAGTTCTCCTTGAGCGCCTCCAGGAAGAGGTaGCAGAGCTTGCTGACAGTGCCTGCGTCGTTGGCCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: AGCTLKFSLSASRKR*QSLLTVPASLALAV
Trigger: CACGGCCAAGGCCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 90 bp TCGCCGGAGATCCCGAATTTGGAGTGCGGAACGTCTGGGTTTGGGTaGCTGGAGGGGTGCGGTGTAAGAGGGTGGCACATCGGACCACGG +
Preference number: 5 (lower is better)
Translates to: SPEIPNLECGTSGFG*LEGCGVRGWHIGPR
Trigger: CCGTGGTCCGATGTGCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 90 bp AGCGCTTTCTGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: SAFCCGCLARRRSRI*SAERLGLGGWRGAV
Trigger: CACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCAGAAAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS CCA 90 bp AGTACCTCTGGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: STSGCGCLARRRSRI*SAERLGLGGWRGAV
Trigger: CACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCCAGAGGTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS-3UTR CAA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGAGGTCCTCGCACACGTaGAGCAGCTCGATGACCTCG +
Preference number: 5 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRRSSHT*SSSMTS
Trigger: CGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCT...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGACCCGAAGGTCTCCTaGGCCAGGCCCGTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFDPKVS*ARPVEP
Trigger: GGGCTCCACGGGCCTGGCCAAGGAGACCTTCGGGTC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS GCA 90 bp GGTCTGGGCCAACTTCAGGAACTCCTTCCCGCTGACCACGCTCAGTaGACCCAGGTCGGCACACATGACCCTCAACAGCCGCTCTGCGAT +
Preference number: 5 (lower is better)
Translates to: GLGQLQELLPADHAQ*TQVGTHDPQQPLCD
Trigger: ATCGCAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGGGTGCACTGAGCGTGGTCAGCGGGAAGGAGTTCCTGAAGTTGGCCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp TCGCACACGTTGAGCAGCTCGATGACCTCGTGCATGCTGCGGGCCTaGAGTGTCCGCTTGCTCAGCACGCTCTGCACCACCGAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SHTLSSSMTSCMLRA*SVRLLSTLCTTEFK
Trigger: CTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAACGTGTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp AGCTTCTGCTGCGGGTCCAGGATCATGGCCACCTTGTGGGCCGGGTaGACCTTGAAGTTCTCCTTGAGCGCCTCCAGGAAGAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SFCCGSRIMATLWAG*TLKFSLSASRKRWQ
Trigger: CTGCCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGCAGCAGAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp CTCTGGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTGGAGTaGGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: LWLRLPCSPEIPNLE*GTSGFGWLEGCGVR
Trigger: TCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS CCA 90 bp GATGAGCTCACAGACCTTGCCGATGATCTCCTCGTGCTGGTAGGGTaGCACAGGCCGCAGCTTCTGCTGCGGGTCCAGGATCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: DELTDLADDLLVLVG*HRPQLLLRVQDHGH
Trigger: GTGGCCATGATCCTGGACCCGCAGCAGAAGCTGCGGCCTGTGCCACCCTACCAGCACGAGGAGATCATCGGCAAGGTCTGTGAGCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 90 bp TTGCTCGCCGGAGATCCCGAATTTGGAGTGCGGAACGTCTGGGTTTaGGTGGCTGGAGGGGTGCGGTGTAAGAGGGTGGCACATCGGACC +
Preference number: 5 (lower is better)
Translates to: LLAGDPEFGVRNVWV*VAGGVRCKRVAHRT
Trigger: GGTCCGATGTGCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 90 bp GAAAGCGCTTTCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: ESAFCGCLARRRSRI*SAERLGLGGWRGAV
Trigger: CACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGAAAGCGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374124.4
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCGTGGCCACGACACCTaGGTCGAAGGGGTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRGHDT*VEGVCP
Trigger: CGGGCAGACCCCTTCGACCAAGGTGTCGTGGCCACG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGCAGAGCGGGGCTTCTaGGCAGCGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFAERGF*AAGSKS
Trigger: CGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTGC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS TCA 90 bp CTGGTGGTCTTGGGAGAGCATCAGTTGGCCTCCTTCACCCTCCCCTaGACCCTTAGCAGTGGTGGCCAGCCCCTGAACCTGGCCACACTT +
Preference number: 5 (lower is better)
Translates to: LVVLGEHQLASFTLP*TLSSGGQPLNLATL
Trigger: AAGTGTGGCCAGGTTCAGGGGCTGGCCACCACTGCTAAGGGTTCAGGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 90 bp CTTGAGCGCCTCCAGGAAGAGGTGGCAGAGCTTGCTGACAGTGCCTaGGTCGTTGGCCTTGGCCGTGAACAGCTTCTCCAGCCTGACGTA +
Preference number: 5 (lower is better)
Translates to: LERLQEEVAELADSA*VVGLGREQLLQPDV
Trigger: TACGTCAGGCTGGAGAAGCTGTTCACGGCCAAGGCCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp CGCTTTCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTGGAGTaGGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: RFLRLPCSPEIPNLE*GTSGFGWLEGCGVR
Trigger: TCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGAAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374124.4
ENST00000615615.4
CDS CCA 90 bp GTTGCCTTGCTCGCCGGAGATCCCGAATTTGGAGTGCGGAACGTCTaGGTTTGGGTGGCTGGAGGGGTGCGGTGTAAGAGGGTGGCACAT +
Preference number: 5 (lower is better)
Translates to: VALLAGDPEFGVRNV*VWVAGGVRCKRVAH
Trigger: ATGTGCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 90 bp GAGTCACTGAGAACCGGGGGCTGGCTCTCCAGCAGTTTCCACCTCTaGTGGTCTTGGGAGAGCATCAGTTGGCCTCCTTCACCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: ESLRTGGWLSSSFHL*WSWESISWPPSPSP
Trigger: AGGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAGAGGTGGAAACTGCTGGAGAGCCAGCCCCCGGTTCTCAGTGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS-3UTR CAA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGATGCCTAGGCAGGCATaGCTGCCCAAGGCACAGGTC +
Preference number: 5 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWMPRQA*LPKAQV
Trigger: GACCTGTGCCTTGGGCAGCAATGCCTGCCTAGGCAT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCGCCTGCAGTGTCCGCTaGCTCAGCACGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGACSVR*LSTLCT
Trigger: GGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGGC...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGAGGTCCTCGCACACGTaGAGCAGCTCGATGACCTCG +
Preference number: 5 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWRSSHT*SSSMTS
Trigger: CGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACCCGAAGGTCTCCTaGGCCAGGCCCGTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGDPKVS*ARPVEP
Trigger: GGGCTCCACGGGCCTGGCCAAGGAGACCTTCGGGTC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGCACCTGGTGGCTTCCTaGAATCCTGGAGACTCACAG +
Preference number: 5 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRHLVAS*NPGDSQ
Trigger: CTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGTG...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS GCA 90 bp GCTCAGTGCACCCAGGTCGGCACACATGACCCTCAACAGCCGCTCTaGGATGTTCTGCCGCTCCTTTTCGGGGATCATGCTGTTGGGTGT +
Preference number: 5 (lower is better)
Translates to: AQCTQVGTHDPQQPL*DVLPLLFGDHAVGC
Trigger: ACACCCAACAGCATGATCCCCGAAAAGGAGCGGCAGAACATCGCAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGGGTGCACTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp TTTCTGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTGGAGTaGGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: FLLRLPCSPEIPNLE*GTSGFGWLEGCGVR
Trigger: TCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS CCA 90 bp CTCTCCAGCAGTTTCCACCTCTGGTGGTCTTGGGAGAGCATCAGTTaGCCTCCTTCACCCTCCCCTGAACCCTTAGCAGTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LSSSFHLWWSWESIS*PPSPSPEPLAVVAS
Trigger: GCTGGCCACCACTGCTAAGGGTTCAGGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAGAGGTGGAAACTGCTGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CCA 90 bp AGAACCGGGGGCTGGCTCTCCAGCAGTTTCCACCTCTGGTGGTCTTaGGAGAGCATCAGTTGGCCTCCTTCACCCTCCCCTGAACCCTTA +
Preference number: 5 (lower is better)
Translates to: RTGGWLSSSFHLWWS*ESISWPPSPSPEPL
Trigger: TAAGGGTTCAGGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAGAGGTGGAAACTGCTGGAGAGCCAGCCCCCGGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CCA 90 bp TCACTGAGAACCGGGGGCTGGCTCTCCAGCAGTTTCCACCTCTGGTaGTCTTGGGAGAGCATCAGTTGGCCTCCTTCACCCTCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: SLRTGGWLSSSFHLW*SWESISWPPSPSPE
Trigger: TTCAGGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAGAGGTGGAAACTGCTGGAGAGCCAGCCCCCGGTTCTCAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCCAAGGGTCTGCTGGTaGCGGACGCCGCCGATCACC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLPRVCW*RTPPIT
Trigger: GGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTGG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCAGGCACATGCCGGCCTaGGAGAAGGCGGACGTGCTC +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLRHMPA*EKADVL
Trigger: GAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGACTCCTTCACCTCGTaGATGAGCTCACAGACCTTG +
Preference number: 5 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRDSFTS*MSSQTL
Trigger: CAAGGTCTGTGAGCTCATCAACGAGGTGAAGGAGTC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGTACAGCCTTTCCTGTaGGTGACACCAGTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRVQPFL*VTPVSG
Trigger: TCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTAC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGCGGAACGTCTGGGTTaGGGTGGCTGGAGGGGTGCG +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQAERLG*GGWRGA
Trigger: CGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS TCA 90 bp AGAAGGCGGACGTGCTCACCCGGCAATCCGTCACGTACACTGTCCTaGTCTCCGACATCACGAACTCCGACAGCACGTTCTGCACCCAGT +
Preference number: 5 (lower is better)
Translates to: RRRTCSPGNPSRTLS*SPTSRTPTARSAPS
Trigger: ACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGATGTCGGAGATCAGGACAGTGTACGTGACGGATTGCCGGGTGAGCACGTCCGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 90 bp CCTCCTTCACCCTCCCCTGAACCCTTAGCAGTGGTGGCCAGCCCCTaGACCTGGCCACACTTCCACACTTCAACCTGGCCTCATTCTCAT +
Preference number: 5 (lower is better)
Translates to: PPSPSPEPLAVVASP*TWPHFHTSTWPHSH
Trigger: ATGAGAATGAGGCCAGGTTGAAGTGTGGAAGTGTGGCCAGGTTCAGGGGCTGGCCACCACTGCTAAGGGTTCAGGGGAGGGTGAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 90 bp ATCTCCGACATCACGAACTCCGACAGCACGTTCTGCACCCAGTGGTaGACAAGGTCACCGCTGTCGCGAATGTCCGCACCCTTCACACCA +
Preference number: 5 (lower is better)
Translates to: ISDITNSDSTFCTQW*TRSPLSRMSAPFTP
Trigger: TGGTGTGAAGGGTGCGGACATTCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGATGTCGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 90 bp CTGATCTCCGACATCACGAACTCCGACAGCACGTTCTGCACCCAGTaGTGCACAAGGTCACCGCTGTCGCGAATGTCCGCACCCTTCACA +
Preference number: 5 (lower is better)
Translates to: LISDITNSDSTFCTQ*CTRSPLSRMSAPFT
Trigger: TGTGAAGGGTGCGGACATTCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGATGTCGGAGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCCTCCGTCATCGTTCCTaGCTCGGCACTCAGCGAGGC +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSLRHRS*LGTQRG
Trigger: GCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGAG...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCCTTCTTCTCCTCCTaGGCCTCGCCCTGCCAGATC +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLAFFSS*ASPCQI
Trigger: GATCTGGCAGGGCGAGGCCAAGGAGGAGAAGAAGGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCCCAAGGGTCTGCTGGTaGCGGACGCCGCCGATCACC +
Preference number: 5 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLPRVCW*RTPPIT
Trigger: GGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTGG...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGTCGGGGATCATGCTGTaGGGTGTTAAACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRSGIML*GVKPLV
Trigger: TACCAGTGGTTTAACACCCAACAGCATGATCCCCGA...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAGCCTGCAGTGTCCGCTaGCTCAGCACGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQACSVR*LSTLCT
Trigger: GGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGGC...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCCTGCGTCGTTGGCCTaGGCCGTGAACAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRPASLA*AVNSFS
Trigger: GGAGAAGCTGTTCACGGCCAAGGCCAACGACGCAGG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGACCTTGAAGTTCTCCTaGAGCGCCTCCAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWTLKFS*SASRKR
Trigger: CCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGT...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTGGGCCGGGTGCACCTaGAAGTTCTCCTTGAGCGCC +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSWAGCT*KFSLSA
Trigger: GGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGATCATGGCCACCTaGTGGGCCGGGTGCACCTTG +
Preference number: 5 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRRIMAT*WAGCTL
Trigger: CAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGGGTCCGGGAGGGGGTGAGTAGTGTGATGCACACTGGGTACCACGCACAGCGGGCCAAGAACCTGGTCTaGGCCGTTCGAATATGTGAA +
Preference number: 5 (lower is better)
Translates to: RVREGVSSVMHTGYHAQRAKNLV*AVRICE
Trigger: TTCACATATTCGAACGGCCAAGACCAGGTTCTTGGC...CCGCTGTGCGTGGTACCCAGTGTGCATCACACTACTCACCCCCTCCCGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCCCGGAGATCCCGAATTaGGAGTGCGGAACGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGPEIPN*ECGTSG
Trigger: CCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGG...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS TCA 90 bp GTAGAACTCGCAGATCTGCTCATAGCGCTCATGCACCAGCAACAGTaGGTCCGTCACCGAGTTCCAGCAGGGTGGTGGAGACGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: VELADLLIALMHQQQ*VRHRVPAGWWRRLL
Trigger: GAGGAGACGTCTCCACCACCCTGCTGGAACTCGGTGACGGACTCACTGTTGCTGGTGCATGAGCGCTATGAGCAGATCTGCGAGTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp CCCAGGTCGGCACACATGACCCTCAACAGCCGCTCTGCGATGTTCTaGCGCTCCTTTTCGGGGATCATGCTGTTGGGTGTTAAACCACTG +
Preference number: 5 (lower is better)
Translates to: PRSAHMTLNSRSAMF*RSFSGIMLLGVKPL
Trigger: CAGTGGTTTAACACCCAACAGCATGATCCCCGAAAAGGAGCGGCAGAACATCGCAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 90 bp TACACTGTCCTGATCTCCGACATCACGAACTCCGACAGCACGTTCTaGACCCAGTGGTGCACAAGGTCACCGCTGTCGCGAATGTCCGCA +
Preference number: 5 (lower is better)
Translates to: YTVLISDITNSDSTF*TQWCTRSPLSRMSA
Trigger: TGCGGACATTCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGATGTCGGAGATCAGGACAGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 90 bp AGGCAGGCATTGCTGCCCAAGGCACAGGTCACTTTCACCTTCACCTaGTTGTACATGCGTGGCAGGTGCTTCAGCGCCAGCGTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RQALLPKAQVTFTFT*LYMRGRCFSASVLK
Trigger: CTTCAACACGCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGTGACCTGTGCCTTGGGCAGCAATGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCTCCGTCATCGTTCCTaGCTCGGCACTCAGCGAGGC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLLRHRS*LGTQRG
Trigger: GCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGAG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGCCTTCTTCTCCTCCTaGGCCTCGCCCTGCCAGATC +
Preference number: 5 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGAFFSS*ASPCQI
Trigger: GATCTGGCAGGGCGAGGCCAAGGAGGAGAAGAAGGC...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCGTGGCCACGACACCTaGGTCGAAGGGGTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSRGHDT*VEGVCP
Trigger: CGGGCAGACCCCTTCGACCAAGGTGTCGTGGCCACG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGATGCCTAGGCAGGCATaGCTGCCCAAGGCACAGGTC +
Preference number: 5 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRMPRQA*LPKAQV
Trigger: GACCTGTGCCTTGGGCAGCAATGCCTGCCTAGGCAT...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAAGGCACATGCCGGCCTaGGAGAAGGCGGACGTGCTC +
Preference number: 5 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKRHMPA*EKADVL
Trigger: GAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGTGGGCTGGCTCTCGTaGCTCAGCTCGATGACTGCC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLVGWLS*LSSMTA
Trigger: GGCAGTCATCGAGCTGAGCAACGAGAGCCAGCCCAC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATGGGCCGGGTGCACCTaGAAGTTCTCCTTGAGCGCC +
Preference number: 5 (lower is better)
Translates to: WRLTASHLCHCTALLSLPWAGCT*KFSLSA
Trigger: GGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGCAGAGCGGGGCTTCTaGGCAGCGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSAERGF*AAGSKS
Trigger: CGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTGC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCAGGCAGCTCCTATCCTaGTGTGGGTCAAAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFRQLLS*CGSKCR
Trigger: CCGGCACTTTGACCCACACAAGGATAGGAGCTGCCT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGTCAACGCTGCAGTTCTaGGCTTGGGCTTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWSTLQF*AWALLV
Trigger: CACCAACAAAGCCCAAGCCAAGAACTGCAGCGTTGA...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGAGGCATTGCCGCTGTaGCCAAGGCGAGGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLEALPL*PRRGQS
Trigger: GCTTTGCCCTCGCCTTGGCAACAGCGGCAATGCCTC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS CCA 90 bp GCCCAAGGCACAGGTCACTTTCACCTTCACCTGGTTGTACATGCGTaGCAGGTGCTTCAGCGCCAGCGTGTTGAAGTTGCCCAGGATTTC +
Preference number: 5 (lower is better)
Translates to: AQGTGHFHLHLVVHA*QVLQRQRVEVAQDF
Trigger: GAAATCCTGGGCAACTTCAACACGCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGTGACCTGTGCCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS-3UTR CAA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCATCGCTGGTCCCATCCTaGCTGACCGCCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: WRLTASHLCHCTALLSLPSLVPS*LTAFFS
Trigger: GGAGAAGAAGGCGGTCAGCAAGGATGGGACCAGCGA...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGCCAGCGTGTTGAAGTaGCCCAGGATTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFASVLK*PRISVT
Trigger: GGTCACTGAAATCCTGGGCAACTTCAACACGCTGGC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCCCTGCGTCGTTGGCCTaGGCCGTGAACAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLPASLA*AVNSFS
Trigger: GGAGAAGCTGTTCACGGCCAAGGCCAACGACGCAGG...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCACAGTGCCTGCGTCGTaGGCCTTGGCCGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLTVPAS*ALAVNS
Trigger: GCTGTTCACGGCCAAGGCCAACGACGCAGGCACTGT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAAAGAGGTGGCAGAGCTaGCTGACAGTGCCTGCGTCG +
Preference number: 5 (lower is better)
Translates to: WRLTASHLCHCTALLSLPKRWQS*LTVPAS
Trigger: CGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGTGAGGTGGATATTGTaGGAGATAAAGGGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWVRWIL*EIKGPV
Trigger: CACTGGCCCCTTTATCTCCAACAATATCCACCTCAC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAAGCGCTTTCTGCGGTaGCCTTGCTCGCCGGAGATC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLKRFLR*PCSPEI
Trigger: GATCTCCGGCGAGCAAGGCAACCGCAGAAAGCGCTT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS TCA 90 bp AGACCCAGATGCATATCTCAATGCTTGGTCAAAAATCCAGGTCCCTaGATACCGGCTTCGCACAGATCCACCGTGGGGGCTGCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: RPRCISQCLVKNPGP*IPASHRSTVGAAFG
Trigger: CCCGAAGGCAGCCCCCACGGTGGATCTGTGCGAAGCCGGTATTCAGGGACCTGGATTTTTGACCAAGCATTGAGATATGCATCTGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374126.9
CDS GCA 90 bp GCACAGGTCACTTTCACCTTCACCTGGTTGTACATGCGTGGCAGGTaGTTCAGCGCCAGCGTGTTGAAGTTGCCCAGGATTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: AQVTFTFTWLYMRGR*FSASVLKLPRISVT
Trigger: GGTCACTGAAATCCTGGGCAACTTCAACACGCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGTGACCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 90 bp AGCCCACTGTGTAGGTCACCCATAACCCTTGACCAGCCCAGTCTCTaGACTGACTGGCTCTTAGGGCATCTGAATTGGTTAACCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SPLCRSPITLDQPSL*TDWLLGHLNWLTQA
Trigger: GGCCTGGGTTAACCAATTCAGATGCCCTAAGAGCCAGTCAGTCCAGAGACTGGGCTGGTCAAGGGTTATGGGTGACCTACACAGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGCGACTGAAAGCGCTTTaGATGGGGGCGTGTAAGGCC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLRLKAL*MGACKA
Trigger: GGCCTTACACGCCCCCATCAAAAGCGCTTTCAGTCG...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288466.11
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGTGGGCTGGCTCTCGTaGCTCAGCTCGATGACTGCC +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSVGWLS*LSSMTA
Trigger: GGCAGTCATCGAGCTGAGCAACGAGAGCCAGCCCAC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCAATGGGGTGTCACCCTaGGCATCCGAACTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLNGVSP*ASELCV
Trigger: CACACACAGTTCGGATGCCAAGGGTGACACCCCATT...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAATGGGGTGTCACCCTaGGCATCCGAACTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSNGVSP*ASELCV
Trigger: CACACACAGTTCGGATGCCAAGGGTGACACCCCATT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAACTGCTCTCCTGTCCTaGCCAGGAAACCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQTALLS*PGNPGT
Trigger: GGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAACTGCTCTCCTGTCCTaGCCAGGAAACCCTGGTACC +
Preference number: 5 (lower is better)
Translates to: WRLTASHLCHCTALLSLPTALLS*PGNPGT
Trigger: GGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCACCTGGTGGCTTCCTaGAATCCTGGAGACTCACAG +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLHLVAS*NPGDSQ
Trigger: CTGTGAGTCTCCAGGATTCAAGGAAGCCACCAGGTG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS GCA 90 bp GCGCCCGCACGTGGGTCTGGAAGCAGTTGTAATACTTGTACTTCTTaGCACAGATTCCGCATTCGTAAGACCCAAGGGTCTGCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: APARGSGSSCNTCTS*HRFRIRKTQGSAGC
Trigger: GCAACCAGCAGACCCTTGGGTCTTACGAATGCGGAATCTGTGGCAAGAAGTACAAGTATTACAACTGCTTCCAGACCCACGTGCGGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS GCA 90 bp GGGACACCTGACGCTTTAATTGAAATAAGTGTAGCAGTTCCTGGATaGTGTCTGGGGAACCCTGCATCACCATTACCCAGGCCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GTPDALIEISVAVPG*CLGNPASPLPRPPA
Trigger: GGCAGGGGGCCTGGGTAATGGTGATGCAGGGTTCCCCAGACAGCATCCAGGAACTGCTACACTTATTTCAATTAAAGCGTCAGGTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS-3UTR CAA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGGGCGATCGGGACTGGTaGGAGGCAATGTTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRGDRDW*EAMLFS
Trigger: TGAAAACAACATTGCCTCCAACCAGTCCCGATCGCC...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGCCAGCGTGTTGAAGTaGCCCAGGATTTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLASVLK*PRISVT
Trigger: GGTCACTGAAATCCTGGGCAACTTCAACACGCTGGC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCTTCAGCGCCAGCGTGTaGAAGTTGCCCAGGATTTCA +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSFSASV*KLPRIS
Trigger: TGAAATCCTGGGCAACTTCAACACGCTGGCGCTGAA...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCACTGAGCAGGTGCTTGTaGAGGCTCTGGATGAGGTTC +
Preference number: 5 (lower is better)
Translates to: WRLTASHLCHCTALLSLPLSRCL*RLWMRF
Trigger: GAACCTCATCCAGAGCCTCAACAAGCACCTGCTCAG...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCTGAGCAGGTGCTTGTaGAGGCTCTGGATGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGLSRCL*RLWMRF
Trigger: GAACCTCATCCAGAGCCTCAACAAGCACCTGCTCAG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTAAGAGGTGGCAGAGCTaGCTGACAGTGCCTGCGTCG +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSKRWQS*LTVPAS
Trigger: CGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTACCTTGAAGTTCTCCTaGAGCGCCTCCAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGTLKFS*SASRKR
Trigger: CCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAATGAGCTCACAGACCTaGCCGATGATCTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQMSSQT*PMISSC
Trigger: GCACGAGGAGATCATCGGCAAGGTCTGTGAGCTCAT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCAGCCAGAAGGCGAGCTaGGCGAGTTTTGTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSSQKAS*ASFVCF
Trigger: AAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGCCTGTCTCAATCCTTaGGCTGAACTAGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWACLNP*AELEFG
Trigger: ACCAAATTCTAGTTCAGCCAAAGGATTGAGACAGGC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGCTGCAGTTCTTGGCTaGGGCTTTGTTGGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLAAVLG*GFVGEA
Trigger: TGCTTCACCAACAAAGCCCAAGCCAAGAACTGCAGC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGCTGCAGTTCTTGGCTaGGGCTTTGTTGGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSAAVLG*GFVGEA
Trigger: TGCTTCACCAACAAAGCCCAAGCCAAGAACTGCAGC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CCTCGGAACATCAACTGTTGGGGCCACAAGGCACCATGCTCACTGCCGTCCTGGGGGAATGTTCCACTTTaGGACAAGAACAGACAGGTA +
Preference number: 5 (lower is better)
Translates to: PRNINCWGHKAPCSLPSWGNVPL*DKNRQV
Trigger: TACCTGTCTGTTCTTGTCCAAAAGTGGAACATTCCC...CCAGGACGGCAGTGAGCATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS CCA 90 bp AAGTCCAGGAGTCTGGAACCTTCTGTCAGCTCACGCTTAGTTATCTaGAGGCCACCAACCAGCCCACTGTGTAGGTCACCCATAACCCTT +
Preference number: 5 (lower is better)
Translates to: KSRSLEPSVSSRLVI*RPPTSPLCRSPITL
Trigger: AAGGGTTATGGGTGACCTACACAGTGGGCTGGTTGGTGGCCTCCAGATAACTAAGCGTGAGCTGACAGAAGGTTCCAGACTCCTGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGTGTACCTGAAATTGTaGCTTTGGGAGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLVYLKL*LWEAPS
Trigger: GGAGGGAGCCTCCCAAAGCAACAATTTCAGGTACAC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCAGGTCTCGGTGCTCTaGGAAACAGCTGTAGTATTT +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFQVSVL*ETAVVF
Trigger: AAATACTACAGCTGTTTCCAAGAGCACCGAGACCTG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCGCAATGTTGTTTTCATaGTCAGCTGCATGGGACTGC +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFAMLFS*SAAWDC
Trigger: GCAGTCCCATGCAGCTGACAATGAAAACAACATTGC...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGTTCAGCGCCAGCGTGTaGAAGTTGCCCAGGATTTCA +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLFSASV*KLPRIS
Trigger: TGAAATCCTGGGCAACTTCAACACGCTGGCGCTGAA...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTTCACCTTCACCTGGTaGTACATGCGTGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLFTFTW*YMRGRC
Trigger: GCACCTGCCACGCATGTACAACCAGGTGAAGGTGAA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATTCACCTTCACCTGGTaGTACATGCGTGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKFTFTW*YMRGRC
Trigger: GCACCTGCCACGCATGTACAACCAGGTGAAGGTGAA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAATTGCTGAGCAGGTGCTaGTTGAGGCTCTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKLLSRC*LRLWMR
Trigger: CCTCATCCAGAGCCTCAACAAGCACCTGCTCAGCAA...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCAGGATCATGGCCACCTaGTGGGCCGGGTGCACCTTG +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCRIMAT*WAGCTL
Trigger: CAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCT...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TGGAGACTCACAGCTTCTCATCTGTGTCACTGCACTGCTCTCCTGTCCTTGCCAAGCAGCCGCCTCCGTTaGATTAGAAGCGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: WRLTASHLCHCTALLSLPSSRLR*IRSACS
Trigger: TGAACAAGCGCTTCTAATCAAACGGAGGCGGCTGCT...TGGCAAGGACAGGAGAGCAGTGCAGTGACACAGATGAGAAGCTGTGAGTCTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGGAGGGAACCAGAGGTaGCAAGAAACAATCATCTGC +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSGGNQR*QETIIC
Trigger: GCAGATGATTGTTTCTTGCAACCTCTGGTTCCCTCC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGAAGTGCAGGCAGTTTaGCTCAGGTGGCATGTGTTT +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSEVQAV*LRWHVF
Trigger: AAACACATGCCACCTGAGCAAAACTGCCTGCACTTC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGAGGCATTGCCGCTGTaGCCAAGGCGAGGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCEALPL*PRRGQS
Trigger: GCTTTGCCCTCGCCTTGGCAACAGCGGCAATGCCTC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp ACATGGCCAAACACCATCCCACCCTCGGAACATCAACTGTTGGGGCCACAAGGCTCTAAATCATCGGCCTaGTTAGGAGCCCTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: TWPNTIPPSEHQLLGPQGSKSSA*LGALLK
Trigger: CTTAAGGAGGGCTCCTAACAAGGCCGATGATTTAGA...GCCTTGTGGCCCCAACAGTTGATGTTCCGAGGGTGGGATGGTGTTTGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCCTTTCTGCGGTTGCCTaGCTCGCCGGAGATCCCGAA +
Preference number: 5 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLSAVA*LAGDPE
Trigger: TTCGGGATCTCCGGCGAGCAAGGCAACCGCAGAAAG...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS GCA 90 bp GGCAAGGGGCTCTGTGGTGCCTTGTGGGCACTGACTGGGAACTGTTaGTCTCATGGGACACCTGACGCTTTAATTGAAATAAGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: GKGLCGALWALTGNC*SHGTPDALIEISVA
Trigger: TGCTACACTTATTTCAATTAAAGCGTCAGGTGTCCCATGAGAGCAACAGTTCCCAGTCAGTGCCCACAAGGCACCACAGAGCCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CCA 90 bp GTTCCTCTGGGCCTGAGGTTTCCACTTCTCTTCTACAACAGCAGGTaGCGATCGGGACTGGTTGGAGGCAATGTTGTTTTCATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: VPLGLRFPLLFYNSR*RSGLVGGNVVFIVS
Trigger: GCTGACAATGAAAACAACATTGCCTCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAAGAGAAGTGGAAACCTCAGGCCCAGAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAATCGGGGATCATGCTGTaGGGTGTTAAACCACTGGTA +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQSGIML*GVKPLV
Trigger: TACCAGTGGTTTAACACCCAACAGCATGATCCCCGA...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCACAGTGCCTGCGTCGTaGGCCTTGGCCGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: YFLINWPNNGASPAQLCSTVPAS*ALAVNS
Trigger: GCTGTTCACGGCCAAGGCCAACGACGCAGGCACTGT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCTCGTACACTTCATTTTaGCCTAGCCGATCATCTTCC +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFSYTSF*PSRSSS
Trigger: GGAAGATGATCGGCTAGGCAAAAATGAAGTGTACGA...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCGAGTTTTGTGTGCTTTaGGGTAACGCACGACCAGTA +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLEFCVL*GNARPV
Trigger: TACTGGTCGTGCGTTACCCAAAAGCACACAAAACTC...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGCCAAGAACCTGGTCTaGGCCGTTCGAATATGTGAA +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLAKNLV*AVRICE
Trigger: TTCACATATTCGAACGGCCAAGACCAGGTTCTTGGC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGATCACCAGCACAACTTaGCTCCAAGTAGAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLITSTT*LQVEGG
Trigger: TCCTCCCTCTACTTGGAGCAAAGTTGTGCTGGTGAT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCATGGTACCAATGCTCTaGGTGGACCTGAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSMVPML*VDLRFL
Trigger: AAGGAATCTCAGGTCCACCAAGAGCATTGGTACCAT...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS GCA 90 bp GCTGGAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTTGTaGTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTCTGCTGCGGT +
Preference number: 5 (lower is better)
Translates to: AGVLRTAVRLFKVVL*FAFYSPTESAFCCG
Trigger: ACCGCAGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS GCA 90 bp GCTGGAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTTGTaGTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTCTGCGGTTGC +
Preference number: 5 (lower is better)
Translates to: AGVLRTAVRLFKVVL*FAFYSPTESAFCGC
Trigger: GCAACCGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCCTCTTCAAAGTGGTTTaGTGCTTTGCCTTCTACTCT +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFLFKVV*CFAFYS
Trigger: AGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAG...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTTGCTGAGCAGGTGCTaGTTGAGGCTCTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFLLSRC*LRLWMR
Trigger: CCTCATCCAGAGCCTCAACAAGCACCTGCTCAGCAA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCATGAGCTCACAGACCTaGCCGATGATCTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFMSSQT*PMISSC
Trigger: GCACGAGGAGATCATCGGCAAGGTCTGTGAGCTCAT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGAGTTTTGTGTGCTTTaGGGTAACGCACGACCAGTA +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLEFCVL*GNARPV
Trigger: TACTGGTCGTGCGTTACCCAAAAGCACACAAAACTC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTCGGAACATCAACTGTaGGGGCCACAAGGCACCATG +
Preference number: 5 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSEHQL*GPQGTM
Trigger: CATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAATGTGTAGAACCTAATTaGCTCACAGCTGGGGGAACA +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQCVEPN*LTAGGT
Trigger: TGTTCCCCCAGCTGTGAGCAAATTAGGTTCTACACA...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAATCACCAGCACAACTTaGCTCCAAGTAGAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKITSTT*LQVEGG
Trigger: TCCTCCCTCTACTTGGAGCAAAGTTGTGCTGGTGAT...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCTCTTCACCTCCCCTTTaGGGTCCATGTATGTCAAAA +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLSSPPL*GPCMSK
Trigger: TTTTGACATACATGGACCCAAAAGGGGAGGTGAAGA...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTATGAGGGAGAAAAACTaGCCAGGTGGAGGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGMREKN*PGGGVF
Trigger: AAACACACCTCCACCTGGCAAGTTTTTCTCCCTCAT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAAGAAGTGCAGGCAGTTTaGCTCAGGTGGCATGTGTTT +
Preference number: 5 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKEVQAV*LRWHVF
Trigger: AAACACATGCCACCTGAGCAAAACTGCCTGCACTTC...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCCAGAGATAGAGGCATaGCCGCTGTTGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCPEIEA*PLLPRR
Trigger: TCGCCTTGGCAACAGCGGCAATGCCTCTATCTCTGG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS GCA 90 bp GCGCCCGCACGTGGGTCTGGAAGCAGTTGTAATACTTGTACTTCTTaGCACAGATTCCGCATTCGTAAGACCCAGATGCATATCTCAATG +
Preference number: 5 (lower is better)
Translates to: APARGSGSSCNTCTS*HRFRIRKTQMHISM
Trigger: CATTGAGATATGCATCTGGGTCTTACGAATGCGGAATCTGTGGCAAGAAGTACAAGTATTACAACTGCTTCCAGACCCACGTGCGGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374126.9
CDS CCA 90 bp GTTTCCACTTCTCTTCTACAACAGCAGGTGGCGATCGGGACTGGTTaGAGGCAATGTTGTTTTCATTGTCAGCTGCATGGGACTGCATGT +
Preference number: 5 (lower is better)
Translates to: VSTSLLQQQVAIGTG*RQCCFHCQLHGTAC
Trigger: ACATGCAGTCCCATGCAGCTGACAATGAAAACAACATTGCCTCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAAGAGAAGTGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCGTGTACCTGAAATTGTaGCTTTGGGAGGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFVYLKL*LWEAPS
Trigger: GGAGGGAGCCTCCCAAAGCAACAATTTCAGGTACAC...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCGCAATGTTGTTTTCATaGTCAGCTGCATGGGACTGC +
Preference number: 5 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLAMLFS*SAAWDC
Trigger: GCAGTCCCATGCAGCTGACAATGAAAACAACATTGC...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGTGGTTGGAGGCAATGTaGTTTTCATTGTCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLWLEAM*FSLSAA
Trigger: TGCAGCTGACAATGAAAACAACATTGCCTCCAACCA...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCAGCAGCCGCCTCCGTTaGATTAGAAGCGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFSSRLR*IRSACS
Trigger: TGAACAAGCGCTTCTAATCAAACGGAGGCGGCTGCT...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAAAGTTTACAGTGTGACTaGAGGAACAAAAGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQSLQCD*RNKRGK
Trigger: CTTGCCCCTTTTGTTCCTCAAGTCACACTGTAAACT...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCTGTGTAGAACCTAATTaGCTCACAGCTGGGGGAACA +
Preference number: 5 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLCVEPN*LTAGGT
Trigger: TGTTCCCCCAGCTGTGAGCAAATTAGGTTCTACACA...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCAGGCAGCTCCTATCCTaGTGTGGGTCAAAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: YFLINWPNNGASPAQLCSRQLLS*CGSKCR
Trigger: CCGGCACTTTGACCCACACAAGGATAGGAGCTGCCT...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAATCTTCACCTCCCCTTTaGGGTCCATGTATGTCAAAA +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQSSPPL*GPCMSK
Trigger: TTTTGACATACATGGACCCAAAAGGGGAGGTGAAGA...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GAAGACATCTTTCACAGCATCGAGTCGAACATGGCCAAACACCATCCCACCCTCATGAGGGAGAAAAACTaGCCAGGTGGAGGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: EDIFHSIESNMAKHHPTLMREKN*PGGGVF
Trigger: AAACACACCTCCACCTGGCAAGTTTTTCTCCCTCAT...GAGGGTGGGATGGTGTTTGGCCATGTTCGACTCGATGCTGTGAAAGATGTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCCAGAGATAGAGGCATaGCCGCTGTTGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: YFLINWPNNGASPAQLCSPEIEA*PLLPRR
Trigger: TCGCCTTGGCAACAGCGGCAATGCCTCTATCTCTGG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGGGGAATGTTCCACTTTaGGACAAGAACAGACAGGTA +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLGNVPL*DKNRQV
Trigger: TACCTGTCTGTTCTTGTCCAAAAGTGGAACATTCCC...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS CCA 90 bp GCAGTTTCGCTGGAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTaGTTTTGTGCTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTCT +
Preference number: 5 (lower is better)
Translates to: AVSLEFCELLFVSSK*FCALPSTLRLKALS
Trigger: AGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS-3UTR CAA 90 bp CTGAGATTCCTTGGGCTACTCCACTCCGAGGGACAACCCTCAACGCTGCAGTTCATGTCTGATGTAATATaGTTCATTGGCCCGATTTTC +
Preference number: 5 (lower is better)
Translates to: LRFLGLLHSEGQPSTLQFMSDVI*FIGPIF
Trigger: GAAAATCGGGCCAATGAACAATATTACATCAGACAT...GAACTGCAGCGTTGAGGGTTGTCCCTCGGAGTGGAGTAGCCCAAGGAATCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288466.11
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGGCGATCGGGACTGGTaGGAGGCAATGTTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCGDRDW*EAMLFS
Trigger: TGAAAACAACATTGCCTCCAACCAGTCCCGATCGCC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTGACTCCTTCACCTCGTaGATGAGCTCACAGACCTTG +
Preference number: 5 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFDSFTS*MSSQTL
Trigger: CAAGGTCTGTGAGCTCATCAACGAGGTGAAGGAGTC...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTAGCCAGAAGGCGAGCTaGGCGAGTTTTGTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFSQKAS*ASFVCF
Trigger: AAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCTCGGAACATCAACTGTaGGGGCCACAAGGCACCATG +
Preference number: 5 (lower is better)
Translates to: YFLINWPNNGASPAQLCSSEHQL*GPQGTM
Trigger: CATGGTGCCTTGTGGCCCCAACAGTTGATGTTCCGA...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGCCCCTAAGTATTGAATaGAGGTGGAAAAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: LRRGHLGTAFPVGDTSFRPLSIE*RWKRSE
Trigger: TTCACTTCTTTTCCACCTCAATTCAATACTTAGGGG...CCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCACTGCACTGCTCTCCTGTCCTTGCCAGGAAACCCTGGTACCCTTTTTCCAGCGGACCTGTGAGATCTTaGGGTTTTATTAAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: SLHCSPVLARKPWYPFSSGPVRS*GFIKLL
Trigger: TAACAGCTTAATAAAACCCAAAGATCTCACAGGTCC...GCTGGAAAAAGGGTACCAGGGTTTCCTGGCAAGGACAGGAGAGCAGTGCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTTCAACGCTGCAGTTCTaGGCTTGGGCTTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFSTLQF*AWALLV
Trigger: CACCAACAAAGCCCAAGCCAAGAACTGCAGCGTTGA...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTATGGTACCAATGCTCTaGGTGGACCTGAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSMVPML*VDLRFL
Trigger: AAGGAATCTCAGGTCCACCAAGAGCATTGGTACCAT...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp AGATGTCTCTTCCCAGCCTGCACACCTGGTGGCTTCCTTGAATCCTGGAGACTCCATCATGAAACTGATTaGGCTGTAAATGGAGAAACG +
Preference number: 5 (lower is better)
Translates to: RCLFPACTPGGFLESWRLHHETD*AVNGET
Trigger: CGTTTCTCCATTTACAGCCAAATCAGTTTCATGATG...GAGTCTCCAGGATTCAAGGAAGCCACCAGGTGTGCAGGCTGGGAAGAGACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTAGTTATCTTTTTGCCTaGGCATCAACCAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGSYLFA*ASTNWE
Trigger: TTCCCAGTTGGTTGATGCCAAGGCAAAAAGATAACT...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTGGTACAGCCTTTCCTGTTGGTGACACCAGTTTCCGGAGGGAACCAGAGGTTGAGTTATCTTTTTGCCTaGGCATCAACCAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: LVQPFLLVTPVSGGNQRLSYLFA*ASTNWE
Trigger: TTCCCAGTTGGTTGATGCCAAGGCAAAAAGATAACT...CAACCTCTGGTTCCCTCCGGAAACTGGTGTCACCAACAGGAAAGGCTGTACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS GCA 90 bp GTAAGGCCACATGCTCCTGGTAGGGAGTGTAGTACTTGTACTGTTTaGCGCAGAATTCACAGGTGTAATTGCCAGTTTCTCTCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: VRPHAPGRECSTCTV*RRIHRCNCQFLSFG
Trigger: GCCAAAAGAGAGAAACTGGCAATTACACCTGTGAATTCTGCGGCAAACAGTACAAGTACTACACTCCCTACCAGGAGCATGTGGCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000452710.5
ENST00000481558.1
CDS GCA 90 bp GTAAGGCCACATGCTCCTGGTAGGGAGTGTAGTACTTGTACTGTTTaGCGCAGAATTCACAGGTGTAATTGCCAGTTTTTGGCCCGATTT +
Preference number: 5 (lower is better)
Translates to: VRPHAPGRECSTCTV*RRIHRCNCQFLARF
Trigger: AAATCGGGCCAAAAACTGGCAATTACACCTGTGAATTCTGCGGCAAACAGTACAAGTACTACACTCCCTACCAGGAGCATGTGGCCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000615615.4
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTTGGTTGGAGGCAATGTaGTTTTCATTGTCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSWLEAM*FSLSAA
Trigger: TGCAGCTGACAATGAAAACAACATTGCCTCCAACCA...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp CTGAGAACAGCCTGTCTGAGAAGAGGGCACCTTGGTACAGCCTTTCCTGTTGGTCCCCTAAGTATTGAATaGAGGTGGAAAAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: LRTACLRRGHLGTAFPVGPLSIE*RWKRSE
Trigger: TTCACTTCTTTTCCACCTCAATTCAATACTTAGGGG...ACCAACAGGAAAGGCTGTACCAAGGTGCCCTCTTCTCAGACAGGCTGTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TTTCCCAATCGCTCAGCTTTCCTGACACGCCCAGTTCAATGCACACCCGTCCAACAATCATCTGCTATCTaGTTATCTAACTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: FPNRSAFLTRPVQCTPVQQSSAI*LSNWTR
Trigger: CCTTGTCCAGTTAGATAACAAGATAGCAGATGATTG...TTGGACGGGTGTGCATTGAACTGGGCGTGTCAGGAAAGCTGAGCGATTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTGCCTGTCTCAATCCTTaGGCTGAACTAGAATTTGGT +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSACLNP*AELEFG
Trigger: ACCAAATTCTAGTTCAGCCAAAGGATTGAGACAGGC...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACGAGGTATCTCACAGTaGAGTGATGCTTTATTATTG +
Preference number: 5 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKRGISQ*SDALLL
Trigger: CAATAATAAAGCATCACTCAACTGTGAGATACCTCG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCGGAGGGAACCAGAGGTaGCAAGAAACAATCATCTGC +
Preference number: 5 (lower is better)
Translates to: YFLINWPNNGASPAQLCSGGNQR*QETIIC
Trigger: GCAGATGATTGTTTCTTGCAACCTCTGGTTCCCTCC...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTTGTGATGGAAAGACCTACAGTGGACCCAGAACTGGGAGGCAGACGACAAAACATCATGAAACTGATTaGGCTGTAAATGGAGAAACG +
Preference number: 5 (lower is better)
Translates to: ACDGKTYSGPRTGRQTTKHHETD*AVNGET
Trigger: CGTTTCTCCATTTACAGCCAAATCAGTTTCATGATG...TTTTGTCGTCTGCCTCCCAGTTCTGGGTCCACTGTAGGTCTTTCCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TATTTTCTAATCAACTGGCCCAATAATGGGGCATCACCAGCACAACTTTGCTCCCAGGTCTCGGTGCTCTaGGAAACAGCTGTAGTATTT +
Preference number: 5 (lower is better)
Translates to: YFLINWPNNGASPAQLCSQVSVL*ETAVVF
Trigger: AAATACTACAGCTGTTTCCAAGAGCACCGAGACCTG...GGAGCAAAGTTGTGCTGGTGATGCCCCATTATTGGGCCAGTTGATTAGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCTCGTACACTTCATTTTaGCCTAGCCGATCATCTTCC +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCSYTSF*PSRSSS
Trigger: GGAAGATGATCGGCTAGGCAAAAATGAAGTGTACGA...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp ATATTGTTGGAGATAAAGGGGCCAGTGGCTGGACCTGTGAGATCTTTGGGTTTTAGTTTACAGTGTGACTaGAGGAACAAAAGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: ILLEIKGPVAGPVRSLGFSLQCD*RNKRGK
Trigger: CTTGCCCCTTTTGTTCCTCAAGTCACACTGTAAACT...AAAACCCAAAGATCTCACAGGTCCAGCCACTGGCCCCTTTATCTCCAACAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GGGAGAGGGCTGTGGTACAGTGCTTTTTGTAGTCGAGGTATCTCACAGTTGAGTCGAGGTATCTCACAGTaGAGTGATGCTTTATTATTG +
Preference number: 5 (lower is better)
Translates to: GRGLWYSAFCSRGISQLSRGISQ*SDALLL
Trigger: CAATAATAAAGCATCACTCAACTGTGAGATACCTCG...ACTCAACTGTGAGATACCTCGACTACAAAAAGCACTGTACCACAGCCCTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp TCATCTGCTATCTTGTTATCTAACTGGACAAGGCAGCCCCAGAGGACAGCTTTCTGTAATTGCCAGTTTTaGGCCCGATTTTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: SSAILLSNWTRQPQRTAFCNCQF*ARFSGM
Trigger: CATTCCAGAAAATCGGGCCAAAAACTGGCAATTACA...GAAAGCTGTCCTCTGGGGCTGCCTTGTCCAGTTAGATAACAAGATAGCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCTCTTCAAAGTGGTTTaGTGCTTTGCCTTCTACTCT +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCLFKVV*CFAFYS
Trigger: AGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCCAATCATCTGCTATCTaGTTATCTAACTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCQSSAI*LSNWTR
Trigger: CCTTGTCCAGTTAGATAACAAGATAGCAGATGATTG...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS-3UTR CAA 90 bp GCTCTAAATGCACATCTGGGCTTAGTCCGATGGCTTTCCAAGAAAGTGAAATGCGGACCTGTGAGATCTTaGGGTTTTATTAAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: ALNAHLGLVRWLSKKVKCGPVRS*GFIKLL
Trigger: TAACAGCTTAATAAAACCCAAAGATCTCACAGGTCC...GCATTTCACTTTCTTGGAAAGCCATCGGACTAAGCCCAGATGTGCATTTAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288466.11
ENST00000615615.4
CDS CCA 72 bp GCTCCCTGCTCGCAGTGCTTTTCCTTCCGGCTGCACTaGCTCCGTCAGCCTGCGGAGCCGCCGCGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: APCSQCFSFRLH*LRQPAEPPRRP
Trigger: CGGGCGGCGCGGCGGCTCCGCAGGCTGACGGAGCCAGTGCAGCCGGAAGGAAAAGCACTGCGAGCAGGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CCA 72 bp CTGCGGGGTTCTCGACGGCAGCAGAGCGGGGCTTCTTaGCAGCGGGCTCGAAGTCGGCCTCCTCGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LRGSRRQQSGAS*QRARSRPPRPR
Trigger: CCTGGGCCGAGGAGGCCGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTGCTGCCGTCGAGAACCCCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp GCTGCGGGGTTCTCGACGGCAGCAGAGCGGGGCTTCTaGGCAGCGGGCTCGAAGTCGGCCTCCTCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: AAGFSTAAERGF*AAGSKSASSAQ
Trigger: CTGGGCCGAGGAGGCCGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTGCTGCCGTCGAGAACCCCGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 72 bp GCTCTCAGTCCCCGAGGGCCCTCCCAGCCGGCAGAGTaGGTGGCCTCTCGGGCCACCAGCCCCACATTCCAG +
Preference number: 6 (lower is better)
Translates to: ALSPRGPSQPAE*VASRATSPTFQ
Trigger: CTGGAATGTGGGGCTGGTGGCCCGAGAGGCCACTCACTCTGCCGGCTGGGAGGGCCCTCGGGGACTGAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 72 bp CAAGCGCTCCCTGCTCGCAGTGCTTTTCCTTCCGGCTaGACTGGCTCCGTCAGCCTGCGGAGCCGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: QALPARSAFPSG*TGSVSLRSRRA
Trigger: GGCGCGGCGGCTCCGCAGGCTGACGGAGCCAGTGCAGCCGGAAGGAAAAGCACTGCGAGCAGGGAGCGCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CAA 72 bp GGTGGAGACGTCTCCTCCAGCGACCCGAAGGTCTCCTaGGCCAGGCCCGTGGAGCCCGCCAGGTCCTCGCAC +
Preference number: 6 (lower is better)
Translates to: GGDVSSSDPKVS*ARPVEPARSSH
Trigger: GTGCGAGGACCTGGCGGGCTCCACGGGCCTGGCCAAGGAGACCTTCGGGTCGCTGGAGGAGACGTCTCCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp CAGCAGGGTGGTGGAGACGTCTCCTCCAGCGACCCGAAGGTCTCCTaGGCCAGGCCCGTGGAGCCCGCCAGGTCCTCGCACACGTTGAGC +
Preference number: 6 (lower is better)
Translates to: QQGGGDVSSSDPKVS*ARPVEPARSSHTLS
Trigger: GCTCAACGTGTGCGAGGACCTGGCGGGCTCCACGGGCCTGGCCAAGGAGACCTTCGGGTCGCTGGAGGAGACGTCTCCACCACCCTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp GTGGAGACGTCTCCTCCAGCGACCCGAAGGTCTCCTTaGCCAGGCCCGTGGAGCCCGCCAGGTCCTCGCACA +
Preference number: 6 (lower is better)
Translates to: VETSPPATRRSP*PGPWSPPGPRT
Trigger: TGTGCGAGGACCTGGCGGGCTCCACGGGCCTGGCCAAGGAGACCTTCGGGTCGCTGGAGGAGACGTCTCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp GGGCTCCTCCTTCACCTCGTCCGTGGCCACGACACCTaGGTCGAAGGGGTCTGCCCGGTTCTCAGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GLLLHLVRGHDT*VEGVCPVLRGP
Trigger: GGGGCCCCTGAGAACCGGGCAGACCCCTTCGACCAAGGTGTCGTGGCCACGGACGAGGTGAAGGAGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000481558.1
ENST00000615615.4
CDS CAA 90 bp GCACTCAGCGAGGCCTCGGCTGGCACTGGCTCTGGGCCCTCCACCTaGGTGCTCTTCTGGCTGCGCTTCAAGCGCTCCCTGCTCGCAGTG +
Preference number: 6 (lower is better)
Translates to: ALSEASAGTGSGPST*VLFWLRFKRSLLAV
Trigger: CACTGCGAGCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTGAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CAA 90 bp GTCTCCTTGGCCAGGCCCGTGGAGCCCGCCAGGTCCTCGCACACGTaGAGCAGCTCGATGACCTCGTGCATGCTGCGGGCCTGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: VSLARPVEPARSSHT*SSSMTSCMLRACSV
Trigger: GACACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCTGGCGGGCTCCACGGGCCTGGCCAAGGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 72 bp GCTGCAGGGTGGGCTGGCTCTCGTTGCTCAGCTCGATaGCTGCCTGCTTCACCGGCGTCAGGATGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: AAGWAGSRCSAR*LPASPASGWPP
Trigger: TGGCGGCCATCCTGACGCCGGTGAAGCAGGCAGTCATCGAGCTGAGCAACGAGAGCCAGCCCACCCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp CCGAGTTCAAGGCACAGGCTGAGCAGCGAAGGCACATaGCGGCCTTGGAGAAGGCGGACGTGCTCACCCGGC +
Preference number: 6 (lower is better)
Translates to: PSSRHRLSSEGT*RPWRRRTCSPG
Trigger: GCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp TCCTTGCTCGGCACTCAGCGAGGCCTCGGCTGGCACTaGCTCTGGGCCCTCCACCTTGGTGCTCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SLLGTQRGLGWH*LWALHLGALLA
Trigger: AGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTGAGTGCCGAGCAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CAA 90 bp GGCACAGGCCGCAGCTTCTGCTGCGGGTCCAGGATCATGGCCACCTaGTGGGCCGGGTGCACCTTGAAGTTCTCCTTGAGCGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GTGRSFCCGSRIMAT*WAGCTLKFSLSASR
Trigger: CCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGCAGCAGAAGCTGCGGCCTGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp GTGGGCTGGCTCTCGTTGCTCAGCTCGATGACTGCCTaGTTCACCGGCGTCAGGATGGCCGCCAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VGWLSLLSSMTA*FTGVRMAARLL
Trigger: CAGCAACCTGGCGGCCATCCTGACGCCGGTGAAGCAGGCAGTCATCGAGCTGAGCAACGAGAGCCAGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp CAGGGTGGGCTGGCTCTCGTTGCTCAGCTCGATGACTaGCTGCTTCACCGGCGTCAGGATGGCCGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: QGGLALVAQLDD*LLHRRQDGRQV
Trigger: AACCTGGCGGCCATCCTGACGCCGGTGAAGCAGGCAGTCATCGAGCTGAGCAACGAGAGCCAGCCCACCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp GGCACTGGCTCTGGGCCCTCCACCTTGGTGCTCTTCTaGCTGCGCTTCAAGCGCTCCCTGCTCGCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: GTGSGPSTLVLF*LRFKRSLLAVL
Trigger: AAGCACTGCGAGCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CCA 72 bp AGGCACAGGCTGAGCAGCGAAGGCACATGCCGGCCTTaGAGAAGGCGGACGTGCTCACCCGGCAATCCGTCA +
Preference number: 6 (lower is better)
Translates to: RHRLSSEGTCRP*RRRTCSPGNPS
Trigger: TGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp ACGCAGATCTCGGCAGGCACGTCGCTGGTCCCATCCTaGCTGACCGCCTTCTTCTCCTCCTTGGCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: TQISAGTSLVPS*LTAFFSSLASP
Trigger: GGGCGAGGCCAAGGAGGAGAAGAAGGCGGTCAGCAAGGATGGGACCAGCGACGTGCCTGCCGAGATCTGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CAA 72 bp AAGGCACAGGCTGAGCAGCGAAGGCACATGCCGGCCTaGGAGAAGGCGGACGTGCTCACCCGGCAATCCGTC +
Preference number: 6 (lower is better)
Translates to: KAQAEQRRHMPA*EKADVLTRQSV
Trigger: GACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp GTCATCGGGCAGCTCTGTCTTCACCTTCACCTCCGTCATCGTTCCTaGCTCGGCACTCAGCGAGGCCTCGGCTGGCACTGGCTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VIGQLCLHLHLRHRS*LGTQRGLGWHWLWA
Trigger: GGCCCAGAGCCAGTGCCAGCCGAGGCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGAGGTGAAGGTGAAGACAGAGCTGCCCGATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CAA 90 bp CCGATCACCACGCAGATCTCGGCAGGCACGTCGCTGGTCCCATCCTaGCTGACCGCCTTCTTCTCCTCCTTGGCCTCGCCCTGCCAGATC +
Preference number: 6 (lower is better)
Translates to: PITTQISAGTSLVPS*LTAFFSSLASPCQI
Trigger: GATCTGGCAGGGCGAGGCCAAGGAGGAGAAGAAGGCGGTCAGCAAGGATGGGACCAGCGACGTGCCTGCCGAGATCTGCGTGGTGATCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS TCA 72 bp CAGCACGCTCTGCACCACCGAGTTCAAGGCACAGGCTaGGCAGCGAAGGCACATGCCGGCCTTGGAGAAGGC +
Preference number: 6 (lower is better)
Translates to: QHALHHRVQGTG*AAKAHAGLGEG
Trigger: GCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGGTGGTGCAGAGCGTGCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp CTGGCTCTGGGCCCTCCACCTTGGTGCTCTTCTGGCTaGGCTTCAAGCGCTCCCTGCTCGCAGTGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: LALGPPPWCSSG*ASSAPCSQCFS
Trigger: GGAAAAGCACTGCGAGCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS GCA 72 bp TTGAGCAGCTCGATGACCTCGTGCATGCTGCGGGCCTaGAGTGTCCGCTTGCTCAGCACGCTCTGCACCACC +
Preference number: 6 (lower is better)
Translates to: LSSSMTSCMLRA*SVRLLSTLCTT
Trigger: GGTGGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp AGGTCCTCGCACACGTTGAGCAGCTCGATGACCTCGTaGATGCTGCGGGCCTGCAGTGTCCGCTTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: RSSHTLSSSMTS*MLRACSVRLLS
Trigger: GCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp TGCCTTCGGGCGCTTTTCCATCAAGGGTCTGCTGGTTaGGGACGCCGCCGATCACCACGCAGATCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: CLRALFHQGSAG*GRRRSPRRSRQ
Trigger: CTGCCGAGATCTGCGTGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTGATGGAAAAGCGCCCGAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374126.9
CDS GCA 72 bp CGGTTGCCTTGCTCGCCGGAGATCCCGAATTTGGAGTaGGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGC +
Preference number: 6 (lower is better)
Translates to: RLPCSPEIPNLE*GTSGFGWLEGC
Trigger: GCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 72 bp GGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GCGCLARRRSRI*SAERLGLGGWR
Trigger: CCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS CAA 72 bp CTGCCTTCGGGCGCTTTTCCATCAAGGGTCTGCTGGTaGCGGACGCCGCCGATCACCACGCAGATCTCGGCA +
Preference number: 6 (lower is better)
Translates to: LPSGAFPSRVCW*RTPPITTQISA
Trigger: TGCCGAGATCTGCGTGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTGATGGAAAAGCGCCCGAAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374126.9
CDS CAA 90 bp AGCAGCTCGATGACCTCGTGCATGCTGCGGGCCTGCAGTGTCCGCTaGCTCAGCACGCTCTGCACCACCGAGTTCAAGGCACAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSSMTSCMLRACSVR*LSTLCTTEFKAQAE
Trigger: CTCAGCCTGTGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp ACCGAGTTCAAGGCACAGGCTGAGCAGCGAAGGCACATGCCGGCCTaGGAGAAGGCGGACGTGCTCACCCGGCAATCCGTCACGTACACT +
Preference number: 6 (lower is better)
Translates to: TEFKAQAEQRRHMPA*EKADVLTRQSVTYT
Trigger: AGTGTACGTGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGGCATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp TGCTGCGGGTCCAGGATCATGGCCACCTTGTGGGCCGGGTGCACCTaGAAGTTCTCCTTGAGCGCCTCCAGGAAGAGGTGGCAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: CCGSRIMATLWAGCT*KFSLSASRKRWQSL
Trigger: CAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp CTTCTGGCGCCCACGGCCGGAACCGCCAGGAGCCAGAAGGCGAGCTaGGCGAGTTTTGTGTGCTTTTGGGTAACGCACGACCAGTACTGG +
Preference number: 6 (lower is better)
Translates to: LLAPTAGTARSQKAS*ASFVCFWVTHDQYW
Trigger: CCAGTACTGGTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCTCCTGGCGGTTCCGGCCGTGGGCGCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp AAGCGCTTTCTGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTaGGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGT +
Preference number: 6 (lower is better)
Translates to: KRFLLRLPCSPEIPN*ECGTSGFGWLEGCG
Trigger: ACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCAGAAAGCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS CAA 90 bp AAGTACCTCTGGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTaGGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGGGGTGCGGT +
Preference number: 6 (lower is better)
Translates to: KYLWLRLPCSPEIPN*ECGTSGFGWLEGCG
Trigger: ACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCCAGAGGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS TCA 72 bp GTACCTGAAATTGTTGCTTTGGGAGGCTCCCTCCCCTaGGGTGGCTTCGGTGTCTCGGTGCGCCCGCACGTG +
Preference number: 6 (lower is better)
Translates to: VPEIVALGGSLP*GGFGVSVRPHV
Trigger: CACGTGCGGGCGCACCGAGACACCGAAGCCACCTCAGGGGAGGGAGCCTCCCAAAGCAACAATTTCAGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS TCA 72 bp CCCTCCCCTGAACCCTTAGCAGTGGTGGCCAGCCCCTaGACCTGGCCACACTTCCACACTTCAACCTGGCCT +
Preference number: 6 (lower is better)
Translates to: PSPEPLAVVASP*TWPHFHTSTWP
Trigger: AGGCCAGGTTGAAGTGTGGAAGTGTGGCCAGGTTCAGGGGCTGGCCACCACTGCTAAGGGTTCAGGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 72 bp AGCTCTGTCTTCACCTTCACCTCCGTCATCGTTCCTTaGTCGGCACTCAGCGAGGCCTCGGCTGGCACTGGC +
Preference number: 6 (lower is better)
Translates to: SSVFTFTSVIVP*SALSEASAGTG
Trigger: GCCAGTGCCAGCCGAGGCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGAGGTGAAGGTGAAGACAGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS CCA 72 bp ACAGACCTTGCCGATGATCTCCTCGTGCTGGTAGGGTaGCACAGGCCGCAGCTTCTGCTGCGGGTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: TDLADDLLVLVG*HRPQLLLRVQD
Trigger: ATCCTGGACCCGCAGCAGAAGCTGCGGCCTGTGCCACCCTACCAGCACGAGGAGATCATCGGCAAGGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp CAGGTCCCTGAATACCGGCTTCGCACAGATCCACCGTaGGGGCTGCCTTCGGGCGCTTTTCCATCAAGGGTC +
Preference number: 6 (lower is better)
Translates to: QVPEYRLRTDPP*GLPSGAFPSRV
Trigger: GACCCTTGATGGAAAAGCGCCCGAAGGCAGCCCCCACGGTGGATCTGTGCGAAGCCGGTATTCAGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374126.9
CDS CCA 72 bp CTCGCCGGAGATCCCGAATTTGGAGTGCGGAACGTCTaGGTTTGGGTGGCTGGAGGGGTGCGGTGTAAGAGG +
Preference number: 6 (lower is better)
Translates to: LAGDPEFGVRNV*VWVAGGVRCKR
Trigger: CCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 72 bp TGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: CCGCLARRRSRI*SAERLGLGGWR
Trigger: CCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS CCA 72 bp ACCGGGGGCTGGCTCTCCAGCAGTTTCCACCTCTGGTaGTCTTGGGAGAGCATCAGTTGGCCTCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: TGGWLSSSFHLW*SWESISWPPSP
Trigger: GGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAGAGGTGGAAACTGCTGGAGAGCCAGCCCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CAA 72 bp ATGACCTCGTGCATGCTGCGGGCCTGCAGTGTCCGCTaGCTCAGCACGCTCTGCACCACCGAGTTCAAGGCA +
Preference number: 6 (lower is better)
Translates to: MTSCMLRACSVR*LSTLCTTEFKA
Trigger: TGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCGGACACTGCAGGCCCGCAGCATGCACGAGGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp GCCACCTTGTGGGCCGGGTGCACCTTGAAGTTCTCCTaGAGCGCCTCCAGGAAGAGGTGGCAGAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: ATLWAGCTLKFS*SASRKRWQSLL
Trigger: CAGCAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp CGCAGCTTCTGCTGCGGGTCCAGGATCATGGCCACCTaGTGGGCCGGGTGCACCTTGAAGTTCTCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: RSFCCGSRIMAT*WAGCTLKFSLS
Trigger: GCTCAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGCAGCAGAAGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp CCCACGGCCGGAACCGCCAGGAGCCAGAAGGCGAGCTaGGCGAGTTTTGTGTGCTTTTGGGTAACGCACGAC +
Preference number: 6 (lower is better)
Translates to: PTAGTARSQKAS*ASFVCFWVTHD
Trigger: GTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCTCCTGGCGGTTCCGGCCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp CTGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTaGGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LLRLPCSPEIPN*ECGTSGFGWLE
Trigger: CTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS CAA 72 bp GGGCTGGCTCTCCAGCAGTTTCCACCTCTGGTGGTCTaGGGAGAGCATCAGTTGGCCTCCTTCACCCTCCCC +
Preference number: 6 (lower is better)
Translates to: GLALQQFPPLVV*GEHQLASFTLP
Trigger: GGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAGAGGTGGAAACTGCTGGAGAGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CAA 72 bp TGGCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTaGGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: WLRLPCSPEIPN*ECGTSGFGWLE
Trigger: CTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS TCA 72 bp TTGGGAGAGCATCAGTTGGCCTCCTTCACCCTCCCCTaGACCCTTAGCAGTGGTGGCCAGCCCCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: LGEHQLASFTLP*TLSSGGQPLNL
Trigger: CAGGTTCAGGGGCTGGCCACCACTGCTAAGGGTTCAGGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 72 bp AGATTCCGCATTCGTAAGACCCAAGGGTCTGCTGGTTaGGGACGCCGCCGATCACCACGCAGATCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: RFRIRKTQGSAG*GRRRSPRRSRQ
Trigger: CTGCCGAGATCTGCGTGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTGGGTCTTACGAATGCGGAATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000452710.5
ENST00000481558.1
ENST00000615615.4
CDS GCA 72 bp CAACTTCAGGAACTCCTTCCCGCTGACCACGCTCAGTaGACCCAGGTCGGCACACATGACCCTCAACAGCCG +
Preference number: 6 (lower is better)
Translates to: QLQELLPADHAQ*TQVGTHDPQQP
Trigger: CGGCTGTTGAGGGTCATGTGTGCCGACCTGGGTGCACTGAGCGTGGTCAGCGGGAAGGAGTTCCTGAAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp ATCACGAACTCCGACAGCACGTTCTGCACCCAGTGGTaGACAAGGTCACCGCTGTCGCGAATGTCCGCACCC +
Preference number: 6 (lower is better)
Translates to: ITNSDSTFCTQW*TRSPLSRMSAP
Trigger: GGGTGCGGACATTCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp CTGAATACCGGCTTCGCACAGATCCACCGTGGGGGCTaGCTTCGGGCGCTTTTCCATCAAGGGTCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: LNTGFAQIHRGG*LRALFHQGSAG
Trigger: ACCAGCAGACCCTTGATGGAAAAGCGCCCGAAGGCAGCCCCCACGGTGGATCTGTGCGAAGCCGGTATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374126.9
CDS CCA 72 bp GAAGCGCTTGTTCACACATATTTACACACCCGCTTCTaGCGCCCACGGCCGGAACCGCCAGGAGCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: EALVHTYLHTRF*RPRPEPPGARR
Trigger: CCTTCTGGCTCCTGGCGGTTCCGGCCGTGGGCGCCAGAAGCGGGTGTGTAAATATGTGTGAACAAGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp GGAGATCCCGAATTTGGAGTGCGGAACGTCTGGGTTTaGGTGGCTGGAGGGGTGCGGTGTAAGAGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: GDPEFGVRNVWV*VAGGVRCKRVA
Trigger: TGCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 72 bp TTCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: FCGCLARRRSRI*SAERLGLGGWR
Trigger: CCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374124.4
ENST00000615615.4
CDS CCA 72 bp CTCGCCGGAGATCCCGAATTTGGAGTGCGGAACGTCTaGGTTTGGGTGGTGATGGGGGCGTGTAAGGCCACA +
Preference number: 6 (lower is better)
Translates to: LAGDPEFGVRNV*VWVVMGACKAT
Trigger: TGTGGCCTTACACGCCCCCATCACCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452710.5
CDS CCA 72 bp GGCTGGCTCTCCAGCAGTTTCCACCTCTGGTGGTCTTaGGAGAGCATCAGTTGGCCTCCTTCACCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: GWLSSSFHLWWS*ESISWPPSPSP
Trigger: AGGGGAGGGTGAAGGAGGCCAACTGATGCTCTCCCAAGACCACCAGAGGTGGAAACTGCTGGAGAGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CAA 72 bp AAGAGGTGGCAGAGCTTGCTGACAGTGCCTGCGTCGTaGGCCTTGGCCGTGAACAGCTTCTCCAGCCTGACG +
Preference number: 6 (lower is better)
Translates to: KRWQSLLTVPAS*ALAVNSFSSLT
Trigger: CGTCAGGCTGGAGAAGCTGTTCACGGCCAAGGCCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp TCCAGGATCATGGCCACCTTGTGGGCCGGGTGCACCTaGAAGTTCTCCTTGAGCGCCTCCAGGAAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: SRIMATLWAGCT*KFSLSASRKRW
Trigger: CCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp AGGATCATGGCCACCTTGTGGGCCGGGTGCACCTTGAAGTTCTCCTaGAGCGCCTCCAGGAAGAGGTGGCAGAGCTTGCTGACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: RIMATLWAGCTLKFS*SASRKRWQSLLTVP
Trigger: AGGCACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp ACCCAGGTCGGCACACATGACCCTCAACAGCCGCTCTaGGATGTTCTGCCGCTCCTTTTCGGGGATCATGCT +
Preference number: 6 (lower is better)
Translates to: TQVGTHDPQQPL*DVLPLLFGDHA
Trigger: AGCATGATCCCCGAAAAGGAGCGGCAGAACATCGCAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp CTGATCTCCGACATCACGAACTCCGACAGCACGTTCTaGACCCAGTGGTGCACAAGGTCACCGCTGTCGCGA +
Preference number: 6 (lower is better)
Translates to: LISDITNSDSTF*TQWCTRSPLSR
Trigger: TCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGATGTCGGAGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp GACATCACGAACTCCGACAGCACGTTCTGCACCCAGTaGTGCACAAGGTCACCGCTGTCGCGAATGTCCGCA +
Preference number: 6 (lower is better)
Translates to: DITNSDSTFCTQ*CTRSPLSRMSA
Trigger: TGCGGACATTCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGTGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp ACCTTGAAGTTCTCCTTGAGCGCCTCCAGGAAGAGGTaGCAGAGCTTGCTGACAGTGCCTGCGTCGTTGGCC +
Preference number: 6 (lower is better)
Translates to: TLKFSLSASRKR*QSLLTVPASLA
Trigger: GGCCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAGGAGAACTTCAAGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp ATCCCGAATTTGGAGTGCGGAACGTCTGGGTTTGGGTaGCTGGAGGGGTGCGGTGTAAGAGGGTGGCACATC +
Preference number: 6 (lower is better)
Translates to: IPNLECGTSGFG*LEGCGVRGWHI
Trigger: GATGTGCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000470105.1
ENST00000481558.1
ENST00000615615.4
CDS CCA 72 bp TTCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTTaGAGTGCGGAACGTCTGGGTTTGGGTGGTGATGGG +
Preference number: 6 (lower is better)
Translates to: FCGCLARRRSRI*SAERLGLGGDG
Trigger: CCCATCACCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452710.5
CDS CAA 72 bp AAGTCGGCCTCCTCGGCCCAGGACTCCTTCACCTCGTaGATGAGCTCACAGACCTTGCCGATGATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: KSASSAQDSFTS*MSSQTLPMISS
Trigger: CGAGGAGATCATCGGCAAGGTCTGTGAGCTCATCAACGAGGTGAAGGAGTCCTGGGCCGAGGAGGCCGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp TTTCTGCGGTTGCCTTGCTCGCCGGAGATCCCGAATTaGGAGTGCGGAACGTCTGGGTTTGGGTGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: FLRLPCSPEIPN*ECGTSGFGWLE
Trigger: CTCCAGCCACCCAAACCCAGACGTTCCGCACTCCAAATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374124.4
ENST00000615615.4
CDS CAA 90 bp CCAACACTCTGGGAGTGGCAGGTGACACCGATGCCTAGGCAGGCATaGCTGCCCAAGGCACAGGTCACTTTCACCTTCACCTGGTTGTAC +
Preference number: 6 (lower is better)
Translates to: PTLWEWQVTPMPRQA*LPKAQVTFTFTWLY
Trigger: GTACAACCAGGTGAAGGTGAAAGTGACCTGTGCCTTGGGCAGCAATGCCTGCCTAGGCATCGGTGTCACCTGCCACTCCCAGAGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 72 bp GCAGATCTGCTCATAGCGCTCATGCACCAGCAACAGTaGGTCCGTCACCGAGTTCCAGCAGGGTGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: ADLLIALMHQQQ*VRHRVPAGWWR
Trigger: TCTCCACCACCCTGCTGGAACTCGGTGACGGACTCACTGTTGCTGGTGCATGAGCGCTATGAGCAGATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 72 bp TTTAGGGCAAGGGGCTCTGTGGTGCCTTGTGGGCACTaGCTGGGAACTGTTGCTCTCATGGGACACCTGACG +
Preference number: 6 (lower is better)
Translates to: FRARGSVVPCGH*LGTVALMGHLT
Trigger: CGTCAGGTGTCCCATGAGAGCAACAGTTCCCAGTCAGTGCCCACAAGGCACCACAGAGCCCCTTGCCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CCA 72 bp TTGCTGCCCAAGGCACAGGTCACTTTCACCTTCACCTaGTTGTACATGCGTGGCAGGTGCTTCAGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: LLPKAQVTFTFT*LYMRGRCFSAS
Trigger: GCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGTGACCTGTGCCTTGGGCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp CAGGCATTGCTGCCCAAGGCACAGGTCACTTTCACCTTCACCTGGTaGTACATGCGTGGCAGGTGCTTCAGCGCCAGCGTGTTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: QALLPKAQVTFTFTW*YMRGRCFSASVLKL
Trigger: CAACTTCAACACGCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGTGACCTGTGCCTTGGGCAGCAATGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp AACCGCCAGGAGCCAGAAGGCGAGCTTGGCGAGTTTTGTGTGCTTTaGGGTAACGCACGACCAGTACTGGAAGAGATCAGGGGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: NRQEPEGELGEFCVL*GNARPVLEEIRGSL
Trigger: CAGGCTACCCCTGATCTCTTCCAGTACTGGTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCTCCTGGCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 72 bp ACGTGCTCACCCGGCAATCCGTCACGTACACTGTCCTaGTCTCCGACATCACGAACTCCGACAGCACGTTCT +
Preference number: 6 (lower is better)
Translates to: TCSPGNPSRTLS*SPTSRTPTARS
Trigger: AGAACGTGCTGTCGGAGTTCGTGATGTCGGAGATCAGGACAGTGTACGTGACGGATTGCCGGGTGAGCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp GCACACATGACCCTCAACAGCCGCTCTGCGATGTTCTaGCGCTCCTTTTCGGGGATCATGCTGTTGGGTGTT +
Preference number: 6 (lower is better)
Translates to: AHMTLNSRSAMF*RSFSGIMLLGV
Trigger: AACACCCAACAGCATGATCCCCGAAAAGGAGCGGCAGAACATCGCAGAGCGGCTGTTGAGGGTCATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS GCA 72 bp GCCAGGAGCCAGAAGGCGAGCTTGGCGAGTTTTGTGTaGTTTTGGGTAACGCACGACCAGTACTGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: ARSQKASLASFV*FWVTHDQYWKR
Trigger: TCTCTTCCAGTACTGGTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp AGTCTGGAACCTTCTGTCAGCTCACGCTTAGTTATCTaGAGGCCACCAACCAGCCCACTGTGTAGGTCACCC +
Preference number: 6 (lower is better)
Translates to: SLEPSVSSRLVI*RPPTSPLCRSP
Trigger: GGGTGACCTACACAGTGGGCTGGTTGGTGGCCTCCAGATAACTAAGCGTGAGCTGACAGAAGGTTCCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 72 bp CGCCGCAGGTGTAGGGTTCGCTGGAGTTCTGCGAACTaGTGTTCGTCTCTTCAAAGTGGTTTTGTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: RRRCRVRWSSAN*CSSLQSGFVLC
Trigger: GCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAACCCTACACCTGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000615615.4
CDS GCA 72 bp ACTTTCACCTTCACCTGGTTGTACATGCGTGGCAGGTaGTTCAGCGCCAGCGTGTTGAAGTTGCCCAGGATT +
Preference number: 6 (lower is better)
Translates to: TFTFTWLYMRGR*FSASVLKLPRI
Trigger: AATCCTGGGCAACTTCAACACGCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp AGCCAGAAGGCGAGCTTGGCGAGTTTTGTGTGCTTTTaGGTAACGCACGACCAGTACTGGAAGAGATCAGGG +
Preference number: 6 (lower is better)
Translates to: SQKASLASFVCF*VTHDQYWKRSG
Trigger: CCCTGATCTCTTCCAGTACTGGTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp ACAGCAGGTGGCGATCGGGACTGGTTGGAGGCAATGTaGTTTTCATTGTCAGCTGCATGGGACTGCATGTGC +
Preference number: 6 (lower is better)
Translates to: TAGGDRDWLEAM*FSLSAAWDCMC
Trigger: GCACATGCAGTCCCATGCAGCTGACAATGAAAACAACATTGCCTCCAACCAGTCCCGATCGCCACCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp GAGCCAGAAGGCGAGCTTGGCGAGTTTTGTGTGCTTTaGGGTAACGCACGACCAGTACTGGAAGAGATCAGG +
Preference number: 6 (lower is better)
Translates to: EPEGELGEFCVL*GNARPVLEEIR
Trigger: CCTGATCTCTTCCAGTACTGGTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp AGCCGCTCTGCGATGTTCTGCCGCTCCTTTTCGGGGATCATGCTGTaGGGTGTTAAACCACTGGTAGTGGTGTTATTGGCACTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: SRSAMFCRSFSGIML*GVKPLVVVLLALFL
Trigger: GAGGAACAGTGCCAATAACACCACTACCAGTGGTTTAACACCCAACAGCATGATCCCCGAAAAGGAGCGGCAGAACATCGCAGAGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS TCA 72 bp TGCATATCTCAATGCTTGGTCAAAAATCCAGGTCCCTaGATACCGGCTTCGCACAGATCCACCGTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: CISQCLVKNPGP*IPASHRSTVGA
Trigger: AGCCCCCACGGTGGATCTGTGCGAAGCCGGTATTCAGGGACCTGGATTTTTGACCAAGCATTGAGATATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374126.9
CDS CCA 72 bp GGCCTGAGGTTTCCACTTCTCTTCTACAACAGCAGGTaGCGATCGGGACTGGTTGGAGGCAATGTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: GLRFPLLFYNSR*RSGLVGGNVVF
Trigger: GAAAACAACATTGCCTCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAAGAGAAGTGGAAACCTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 72 bp GAAGGGGTCATCCACTGCGTGCAGGTCTCGGTGCTCTaGGAAACAGCTGTAGTATTTGTACTTCTTCCCGCA +
Preference number: 6 (lower is better)
Translates to: EGVIHCVQVSVL*ETAVVFVLLPA
Trigger: TGCGGGAAGAAGTACAAATACTACAGCTGTTTCCAAGAGCACCGAGACCTGCACGCAGTGGATGACCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452710.5
CDS CAA 90 bp CAGCCCCACATTCCAGGGTTGGGACTGTCTCTGTCCAACCTCTTCTaGTGCCACAGAGAACAAGGATTCTCACTTAACTCAGAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: QPHIPGLGLSLSNLF*CHREQGFSLNSEPE
Trigger: CTCTGGCTCTGAGTTAAGTGAGAATCCTTGTTCTCTGTGGCACAAGAAGAGGTTGGACAGAGACAGTCCCAACCCTGGAATGTGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CAA 90 bp GAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTTGTGCTTaGCCTTCTACTCTCCGACTGAAAGCGCTTTCTGCTGCGGTTGCC +
Preference number: 6 (lower is better)
Translates to: EFCELLFVSSKWFCA*PSTLRLKALSAAVA
Trigger: GGCAACCGCAGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS CCA 72 bp TCTCTTCTACAACAGCAGGTGGCGATCGGGACTGGTTaGAGGCAATGTTGTTTTCATTGTCAGCTGCATGGG +
Preference number: 6 (lower is better)
Translates to: SLLQQQVAIGTG*RQCCFHCQLHG
Trigger: CCCATGCAGCTGACAATGAAAACAACATTGCCTCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp TGTAGGTCACCCATAACCCTTGACCAGCCCAGTCTCTaGACTGACTGGCTCTTAGGGCATCTGAATTGGTTA +
Preference number: 6 (lower is better)
Translates to: CRSPITLDQPSL*TDWLLGHLNWL
Trigger: TAACCAATTCAGATGCCCTAAGAGCCAGTCAGTCCAGAGACTGGGCTGGTCAAGGGTTATGGGTGACCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CAA 72 bp GCGATGTTCTGCCGCTCCTTTTCGGGGATCATGCTGTaGGGTGTTAAACCACTGGTAGTGGTGTTATTGGCA +
Preference number: 6 (lower is better)
Translates to: AMFCRSFSGIML*GVKPLVVVLLA
Trigger: TGCCAATAACACCACTACCAGTGGTTTAACACCCAACAGCATGATCCCCGAAAAGGAGCGGCAGAACATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CAA 90 bp TTCGCTGGAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTaGTGCTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FAGVLRTAVRLFKVV*CFAFYSPTESAFCC
Trigger: GCAGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000470105.1
CDS CAA 90 bp GAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTTGTGCTTaGCCTTCTACTCTCCGACTGAAAGCGCTTTCTGCGGTTGCCTTG +
Preference number: 6 (lower is better)
Translates to: EFCELLFVSSKWFCA*PSTLRLKALSAVAL
Trigger: CAAGGCAACCGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374124.4
ENST00000452710.5
ENST00000615615.4
CDS CAA 90 bp TTCGCTGGAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTaGTGCTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTCTGCGGT +
Preference number: 6 (lower is better)
Translates to: FAGVLRTAVRLFKVV*CFAFYSPTESAFCG
Trigger: ACCGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615615.4
CDS GCA 72 bp CTCTGTGGTGCCTTGTGGGCACTGACTGGGAACTGTTaGTCTCATGGGACACCTGACGCTTTAATTGAAATA +
Preference number: 6 (lower is better)
Translates to: LCGALWALTGNC*SHGTPDALIEI
Trigger: TATTTCAATTAAAGCGTCAGGTGTCCCATGAGAGCAACAGTTCCCAGTCAGTGCCCACAAGGCACCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 72 bp TCAGGGGACTTGCAGTTTCGCTGGAGTTCTGCGAACTaGTGTTCGTCTCTTCAAAGTGGTTTTGTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: SGDLQFRWSSAN*CSSLQSGFVLC
Trigger: GCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAAACTGCAAGTCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS GCA 72 bp GCTCAGCTGATAATGCACATTTTGAATAGCTTTCCTTaGCACAAGTACCTCTGGCTGCGGTTGCCTTGCTCG +
Preference number: 6 (lower is better)
Translates to: AQLIMHILNSFP*HKYLWLRLPCS
Trigger: CGAGCAAGGCAACCGCAGCCAGAGGTACTTGTGGCAAGGAAAGCTATTCAAAATGTGCATTATCAGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS CAA 90 bp TTCGCTGGAGTTCTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTaGTGCTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTTGATGGG +
Preference number: 6 (lower is better)
Translates to: FAGVLRTAVRLFKVV*CFAFYSPTESAFDG
Trigger: CCCATCAAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288466.11
CDS GCA 72 bp CTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTTGTaGTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTC +
Preference number: 6 (lower is better)
Translates to: LRTAVRLFKVVL*FAFYSPTESAF
Trigger: GAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374124.4
ENST00000374126.9
ENST00000452710.5
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp AGTCTCTGGACTGACTGGCTCTTAGGGCATCTGAATTaGTTAACCCAGGCCCAAGTGCATCTTCTAGAATGT +
Preference number: 6 (lower is better)
Translates to: SLWTDWLLGHLN*LTQAQVHLLEC
Trigger: ACATTCTAGAAGATGCACTTGGGCCTGGGTTAACCAATTCAGATGCCCTAAGAGCCAGTCAGTCCAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CAA 72 bp ACTAAACACATCCACTGCGTGCAGGTCTCGGTGCTCTaGGAAACAGCTGTAGTATTTGTACTTCTTCCCGCA +
Preference number: 6 (lower is better)
Translates to: TKHIHCVQVSVL*ETAVVFVLLPA
Trigger: TGCGGGAAGAAGTACAAATACTACAGCTGTTTCCAAGAGCACCGAGACCTGCACGCAGTGGATGTGTTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000374126.9
ENST00000481558.1
ENST00000615615.4
CDS CAA 90 bp ATTGAGGCTGCAAACTCTTACACTGCTCAGCTGATAATGCACATTTaGAATAGCTTTCCTTGCCACAAGTACCTCTGGCTGCGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: IEAANSYTAQLIMHI*NSFPCHKYLWLRLP
Trigger: AGGCAACCGCAGCCAGAGGTACTTGTGGCAAGGAAAGCTATTCAAAATGTGCATTATCAGCTGAGCAGTGTAAGAGTTTGCAGCCTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS GCA 72 bp CATGCTCCTGGTAGGGAGTGTAGTACTTGTACTGTTTaGCGCAGAATTCACAGGTGTAATTGCCAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: HAPGRECSTCTV*RRIHRCNCQFL
Trigger: GAGAAACTGGCAATTACACCTGTGAATTCTGCGGCAAACAGTACAAGTACTACACTCCCTACCAGGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374124.4
ENST00000452710.5
ENST00000481558.1
CDS GCA 72 bp CTGCGAACTGCTGTTCGTCTCTTCAAAGTGGTTTTGTaGTTTGCCTTCTACTCTCCGACTGAAAGCGCTTTT +
Preference number: 6 (lower is better)
Translates to: LRTAVRLFKVVL*FAFYSPTESAF
Trigger: AAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAGCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288466.11
CDS GCA 72 bp CATGCTCCTGGTAGGGAGTGTAGTACTTGTACTGTTTaGCGCAGAATTCACAGGTGTAATTGCCAGTTTTTG +
Preference number: 6 (lower is better)
Translates to: HAPGRECSTCTV*RRIHRCNCQFL
Trigger: CAAAAACTGGCAATTACACCTGTGAATTCTGCGGCAAACAGTACAAGTACTACACTCCCTACCAGGAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374126.9
ENST00000615615.4
CDS CAA 90 bp AACATGAGTTTATTCATATCTTCTGGACTGAGCAGCCGCCTCCGTTaGATTAGAAGCGCTTGTTCACACATATTTACACACCCGCTTCTG +
Preference number: 6 (lower is better)
Translates to: NMSLFISSGLSSRLR*IRSACSHIFTHPLL
Trigger: CAGAAGCGGGTGTGTAAATATGTGTGAACAAGCGCTTCTAATCAAACGGAGGCGGCTGCTCAGTCCAGAAGATATGAATAAACTCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4
CDS CCA 72 bp TGGTTAACCCAGGCCCAAGTGCATCTTCTAGAATGTTaGTTTCTAAGCTCCTTTTCCTTTAAAGGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: WLTQAQVHLLEC*FLSSFSFKGRL
Trigger: CAGCCTTCCTTTAAAGGAAAAGGAGCTTAGAAACCAACATTCTAGAAGATGCACTTGGGCCTGGGTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470105.1
CDS CAA 72 bp GCAAACTCTTACACTGCTCAGCTGATAATGCACATTTaGAATAGCTTTCCTTGCCACAAGTACCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ANSYTAQLIMHI*NSFPCHKYLWL
Trigger: CAGCCAGAGGTACTTGTGGCAAGGAAAGCTATTCAAAATGTGCATTATCAGCTGAGCAGTGTAAGAGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481558.1
CDS CAA 72 bp TTATTCATATCTTCTGGACTGAGCAGCCGCCTCCGTTaGATTAGAAGCGCTTGTTCACACATATTTACACAC +
Preference number: 6 (lower is better)
Translates to: LFISSGLSSRLR*IRSACSHIFTH
Trigger: GTGTGTAAATATGTGTGAACAAGCGCTTCTAATCAAACGGAGGCGGCTGCTCAGTCCAGAAGATATGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288466.11
ENST00000374126.9
ENST00000470105.1
ENST00000615615.4