RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF605 (Homo sapiens)

Ensembl gene IDs: ENSG00000196458

Ensembl transcript IDs: ENST00000331711.11, ENST00000360187.9, ENST00000381215.3, ENST00000392321.3, ENST00000412621.6, ENST00000539809.1

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTTCCCTGAACTGCAACCTAGGAACTGCCATGCGGGGGCAGGCTaGGAAACCATGGTGCTCACCTCACTCTGTCTGCAGTCTCCTGAG +
Preference number: 1 (lower is better)
Translates to: PFPELQPRNCHAGAG*ETMVLTSLCLQSPE
Trigger: CTCAGGAGACTGCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATGGCAGTTCCTAGGTTGCAGTTCAGGGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 90 bp TGGTGCCATCTTGGCTCACTGCAACCTCCAACTCCTGGGTTCATGTaGTTTGCCCACCTCAGCCTCCCGAGCAGCTGGGTTTACAGGTGC +
Preference number: 1 (lower is better)
Translates to: WCHLGSLQPPTPGFM*FAHLSLPSSWVYRC
Trigger: GCACCTGTAAACCCAGCTGCTCGGGAGGCTGAGGTGGGCAAATCACATGAACCCAGGAGTTGGAGGTTGCAGTGAGCCAAGATGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR CCA 90 bp AACTGCAACCTAGGAACTGCCATGCGGGGGCAGGCTGAGAAACCATaGTGCTCACCTCACTCTGTCTGCAGTCTCCTGAGGATCACAAAC +
Preference number: 1 (lower is better)
Translates to: NCNLGTAMRGQAEKP*CSPHSVCSLLRITN
Trigger: GTTTGTGATCCTCAGGAGACTGCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATGGCAGTTCCTAGGTTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 90 bp CGTGAGCCATCGCACCTGGCCAGCCTTACCCTTGTAATGAAGCAGTaGAGTACAGCTGGCCCACATCTCAGCCAACATCATCTTCTTACA +
Preference number: 1 (lower is better)
Translates to: REPSHLASLTLVMKQ*STAGPHLSQHHLLT
Trigger: TGTAAGAAGATGATGTTGGCTGAGATGTGGGCCAGCTGTACTTCACTGCTTCATTACAAGGGTAAGGCTGGCCAGGTGCGATGGCTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 90 bp ATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCCTGGCCTCAGTaGAAGTCAGTACTAAGTCAAAGGACTCAGGGGACTCCCAGCAGA +
Preference number: 1 (lower is better)
Translates to: IVQPAAFQCFFSWPQ*KSVLSQRTQGTPSR
Trigger: TCTGCTGGGAGTCCCCTGAGTCCTTTGACTTAGTACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp AACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTaGTTTCCAGTGCTTCTTTTCCTGGCCTCAGTGCAAGTCAGTACT +
Preference number: 1 (lower is better)
Translates to: NYSQPCMSSRNCSAC*FPVLLFLASVQVST
Trigger: AGTACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp CAAATACCATGGTTTGGGGACGAATCTACACTAGACCTGCCTGGCTaGAGTGGTAACACTCCATTGCCTAACTGCTCCTTTCACATGAGC +
Preference number: 1 (lower is better)
Translates to: QIPWFGDESTLDLPG*SGNTPLPNCSFHMS
Trigger: GCTCATGTGAAAGGAGCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTCGTCCCCAAACCATGGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR CCA 90 bp GTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCCTaGCCTCAGTGCAAGTCAGTACTAAGTCAAAGGACTCAGGGGACT +
Preference number: 1 (lower is better)
Translates to: VPGIVQPAAFQCFFS*PQCKSVLSQRTQGT
Trigger: AGTCCCCTGAGTCCTTTGACTTAGTACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp CCAGTACTTTCCCCTGGAAATTCTAGCTGCTGTGGCCTCCCCAACTaGCAGTCCTGTCTCTTCAATTCAGCGAGATTTATTGTTTCCCTT +
Preference number: 1 (lower is better)
Translates to: PVLSPGNSSCCGLPN*QSCLFNSARFIVSL
Trigger: AAGGGAAACAATAAATCTCGCTGAATTGAAGAGACAGGACTGGCAGTTGGGGAGGCCACAGCAGCTAGAATTTCCAGGGGAAAGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp ATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTaGTGCTTTCCAGTGCTTCTTTTCCTGGCCTCAGTGCAAGTCAGT +
Preference number: 1 (lower is better)
Translates to: INYSQPCMSSRNCSA*CFPVLLFLASVQVS
Trigger: ACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp ACACAACAGGACACAATGCACATGCCTTGTTCATACCCTCAGAGCTaGCTGGCAAATACCATGGTTTGGGGACGAATCTACACTAGACCT +
Preference number: 1 (lower is better)
Translates to: TQQDTMHMPCSYPQS*LANTMVWGRIYTRP
Trigger: AGGTCTAGTGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAACAAGGCATGTGCATTGTGTCCTGTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 90 bp CAGAAGGAAGTGTCAGTAACAGGTCTGACCTCGCACAGCTGCCCATaGAATGATGAGTGGATCAAACACTACGGCTTATACAAGATGCTC +
Preference number: 1 (lower is better)
Translates to: QKEVSVTGLTSHSCP*NDEWIKHYGLYKML
Trigger: GAGCATCTTGTATAAGCCGTAGTGTTTGATCCACTCATCATTGCATGGGCAGCTGTGCGAGGTCAGACCTGTTACTGACACTTCCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 90 bp AGAGCACAGAAGGAAGTGTCAGTAACAGGTCTGACCTCGCACAGCTaGCCATGCAATGATGAGTGGATCAAACACTACGGCTTATACAAG +
Preference number: 1 (lower is better)
Translates to: RAQKEVSVTGLTSHS*PCNDEWIKHYGLYK
Trigger: CTTGTATAAGCCGTAGTGTTTGATCCACTCATCATTGCATGGGCAGCTGTGCGAGGTCAGACCTGTTACTGACACTTCCTTCTGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 90 bp CTTGCTTTATTAATTATTTTTGTGGAGAACAAAGTGCCACTATGTTaGCCAGGCTGGCCTCAAACTCTTGGGCTCAAGCTCTCCTCTCCT +
Preference number: 1 (lower is better)
Translates to: LALLIIFVENKVPLC*PGWPQTLGLKLSSP
Trigger: AGGAGAGGAGAGCTTGAGCCCAAGAGTTTGAGGCCAGCCTGGGCAACATAGTGGCACTTTGTTCTCCACAAAAATAATTAATAAAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 90 bp ACAGAATCTGCTTCATACAAACGCATTACACACAACAGGACACAATaGACATGCCTTGTTCATACCCTCAGAGCTGCCTGGCAAATACCA +
Preference number: 1 (lower is better)
Translates to: TESASYKRITHNRTQ*TCLVHTLRAAWQIP
Trigger: TGGTATTTGCCAGGCAGCTCTGAGGGTATGAACAAGGCATGTGCATTGTGTCCTGTTGTGTGTAATGCGTTTGTATGAAGCAGATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR TCA 90 bp AATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTaGAGGAATAGGCTTCTAACTCAGATGATGCAGTCTACTCAACTA +
Preference number: 1 (lower is better)
Translates to: NFCHVPATNSSYPEP*RNRLLTQMMQSTQL
Trigger: TAGTTGAGTAGACTGCATCATCTGAGTTAGAAGCCTATTCCTTCAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 90 bp CTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCTCCTTTCACATaGGCACGCACTAATGAAAATAAAAAGTTAATTCACTTCTCCCAC +
Preference number: 1 (lower is better)
Translates to: LAAVVTLHCLTAPFT*ARTNENKKLIHFSH
Trigger: GTGGGAGAAGTGAATTAACTTTTTATTTTCATTAGTGCGTGCTCATGTGAAAGGAGCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR TCA 90 bp TACGTATTGTATAGCTTCCAGTTGTTTAAGGCAGGAGAGGAAATCTaGCCCTTGTTATTCCATCACAGCAGTAAGGAGAACTCTTCACAT +
Preference number: 1 (lower is better)
Translates to: YVLYSFQLFKAGEEI*PLLFHHSSKENSSH
Trigger: ATGTGAAGAGTTCTCCTTACTGCTGTGATGGAATAACAAGGGTCAGATTTCCTCTCCTGCCTTAAACAACTGGAAGCTATACAATACGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp TTCCTTTGTACAGACCCAAACTTAAGTTTTGTATTATTTTCCTGCTaGCCTCAAACATCCTTTAATGTTTCCCAAAGACAGGTCTACAGG +
Preference number: 1 (lower is better)
Translates to: FLCTDPNLSFVLFSC*PQTSFNVSQRQVYR
Trigger: CCTGTAGACCTGTCTTTGGGAAACATTAAAGGATGTTTGAGGGCAGCAGGAAAATAATACAAAACTTAAGTTTGGGTCTGTACAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 90 bp AAAAGCTTCTCTACTATCACAACACTAATAAGGTTTTCACCTCAATaGGTCATCCAATATGTAACGAGTAGTGTCTTCTGGGAGATGACT +
Preference number: 1 (lower is better)
Translates to: KSFSTITTLIRFSPQ*VIQYVTSSVFWEMT
Trigger: AGTCATCTCCCAGAAGACACTACTCGTTACATATTGGATGACTCATTGAGGTGAAAACCTTATTAGTGTTGTGATAGTAGAGAAGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp TCATTCCTTTGTACAGACCCAAACTTAAGTTTTGTATTATTTTCCTaGTGCCCTCAAACATCCTTTAATGTTTCCCAAAGACAGGTCTAC +
Preference number: 1 (lower is better)
Translates to: SFLCTDPNLSFVLFS*CPQTSFNVSQRQVY
Trigger: GTAGACCTGTCTTTGGGAAACATTAAAGGATGTTTGAGGGCAGCAGGAAAATAATACAAAACTTAAGTTTGGGTCTGTACAAAGGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CCA 90 bp GGTATTTTAATTGTACAGCATAACACTTTAGAGAGCTGGGAAGTATaGGACATCATTCCCGTCTTTCTTCACTCAGTAACTGATTATCTT +
Preference number: 1 (lower is better)
Translates to: GILIVQHNTLESWEV*DIIPVFLHSVTDYL
Trigger: AAGATAATCAGTTACTGAGTGAAGAAAGACGGGAATGATGTCCCATACTTCCCAGCTCTCTAAAGTGTTATGCTGTACAATTAAAATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 90 bp ATTCTGTTTATCAGTGCTTTTCATGAATGTGACTCTGAGGTGCACTaGTGTGATGTAAATTATGTTTATTCTACTTCAGGTCATTTGAGC +
Preference number: 1 (lower is better)
Translates to: ILFISAFHECDSEVH*CDVNYVYSTSGHLS
Trigger: GCTCAAATGACCTGAAGTAGAATAAACATAATTTACATCACAGCAGTGCACCTCAGAGTCACATTCATGAAAAGCACTGATAAACAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCATGCGGGGGCAGGCTaGGAAACCATGGTGCTCACC +
Preference number: 2 (lower is better)
Translates to: ALHEFQELFSLLLSSASFHAGAG*ETMVLT
Trigger: GGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGGTGCTGCCCTCTGCTaGGCCTCTTTGGCAGTCGAC +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTGAALC*ASLAVD
Trigger: GTCGACTGCCAAAGAGGCCCAGCAGAGGGCAGCACC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR GCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAAGGCATGAGCCACCATaGCCGGCCCTGGCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTRHEPP*PALASN
Trigger: ATTACTGGCCAGGGCCGGGCATGGTGGCTCATGCCT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR TCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCATGGTCTCAATCTCCTaGCCTCGTGATCCACCCATC +
Preference number: 2 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCMVSIS*PRDPPI
Trigger: GATGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR TCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCATTCCCAGCCCTGCATaGGTTCCAGGAATTGTTCAG +
Preference number: 2 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCIPSPA*VPGIVQ
Trigger: CTGAACAATTCCTGGAACTCATGCAGGGCTGGGAAT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR CCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCATGGGAAAGGTGGTGTaGATTCGTGGACGAAGTCTC +
Preference number: 2 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCMGKVV*IRGRSL
Trigger: GAGACTTCGTCCACGAATCCACACCACCTTTCCCAT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGATTCCCAGCCCTGCATaGGTTCCAGGAATTGTTCAG +
Preference number: 2 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQIPSPA*VPGIVQ
Trigger: CTGAACAATTCCTGGAACTCATGCAGGGCTGGGAAT...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGCAGGAGAGGAAATCTaGCCCTTGTTATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTAGEEI*PLLFHH
Trigger: GTGATGGAATAACAAGGGTCAGATTTCCTCTCCTGC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGGCTGAGAAACCATGGTaGTCACCTCACTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: YIQFLSCACYKFKLPRALAEKPW*SPHSVC
Trigger: GCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGC...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCAACTATTCCCAGCCCTaGATGAGTTCCAGGAATTGT +
Preference number: 2 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCNYSQP*MSSRNC
Trigger: ACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR CCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGCAGTGCTTCTTTTCCTaGCCTCAGTGCAAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQQCFFS*PQCKSV
Trigger: TACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTG...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAACACAGAAGCTACCATaGTCCAGGCAGGAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QMVTISRATDICSRKAQRTQKLP*SRQEEG
Trigger: CCCTTCCTCCTGCCTGGACCATGGTAGCTTCTGTGT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGAGAGCTGGGAAGTATaGGACATCATTCCCGTCTTT +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTESWEV*DIIPVF
Trigger: AAAGACGGGAATGATGTCCCATACTTCCCAGCTCTC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR CAA 90 bp CTTCATACAAACGCATTACACACAACAGGACACAATGCACATGCCTaGTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: LHTNALHTTGHNAHA*FIPSELPGKYHGLG
Trigger: CCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAACAAGGCATGTGCATTGTGTCCTGTTGTGTGTAATGCGTTTGTATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR TCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCGCAGGAGAGGAAATCTaGCCCTTGTTATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: ENINYSQPCMSSRNCSACAGEEI*PLLFHH
Trigger: GTGATGGAATAACAAGGGTCAGATTTCCTCTCCTGC...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGTCTGAGAATTCTACCTaGTGCTCCATGTGTTTCCAC +
Preference number: 2 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQSENST*CSMCFH
Trigger: GTGGAAACACATGGAGCATCAGGTAGAATTCTCAGA...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCCCTGCTGCTTTCCAGTaGTTCTTTTCCTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETPAAFQ*FFSWPQ
Trigger: CTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGG...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCAATTGTTCAGCCTGCTaGTTTCCAGTGCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCNCSAC*FPVLLF
Trigger: GAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGACAGGCTGAGAAACCATaGTGCTCACCTCACTCTGTC +
Preference number: 2 (lower is better)
Translates to: QMVTISRATDICSRKAQRQAEKP*CSPHSV
Trigger: GACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTG...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCATGCGGGGGCAGGCTaGGAAACCATGGTGCTCACC +
Preference number: 2 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPHAGAG*ETMVLT
Trigger: GGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGGCATGGGAGAATCCTaGTGGTGGAAATCATTTTAT +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTGMGES*WWKSFY
Trigger: ATAAAATGATTTCCACCATCAGGATTCTCCCATGCC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGACAGTGCTTCTTTTCCTaGCCTCAGTGCAAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: QMVTISRATDICSRKAQRQCFFS*PQCKSV
Trigger: TACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTG...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGAGCTTCTTGAATATGTaGGGGTATTGTTTTCACCAG +
Preference number: 2 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQSFLNM*GYCFHQ
Trigger: CTGGTGAAAACAATACCCCCACATATTCAAGAAGCT...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAATCTACAGCCATAGATaGGGCTTCCCAAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: QMVTISRATDICSRKAQRIYSHR*GFPKEA
Trigger: AGCTTCCTTTGGGAAGCCCCATCTATGGCTGTAGAT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGAAGTGTCAGAAAGTATaGCACTTGATAGCAACCTTT +
Preference number: 2 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQKCQKV*HLIATF
Trigger: AAAGGTTGCTATCAAGTGTCATACTTTCTGACACTT...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCTGCTTAGTGACTCTTaGCTCCTCAATTCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTALLSDS*LLNSSF
Trigger: AAAGCTTGAATTGAGGAGTCAAGAGTCACTAAGCAG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGACTACTCTTCAGTATaGACCTCTGTAGGTATTATT +
Preference number: 2 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQDYSSV*TSVGII
Trigger: AATAATACCTACAGAGGTTCATACTGAAGAGTAGTC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCTTCCACTCTGGCTGCTaGGAACATAAACTATTCCCA +
Preference number: 2 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETFHSGC*EHKLFP
Trigger: TGGGAATAGTTTATGTTCTCAGCAGCCAGAGTGGAA...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAACAGATAGAAAATACTaGTATGTAGTGTGGGGAATC +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTTDRKY*YVVWGI
Trigger: GATTCCCCACACTACATATCAGTATTTTCTATCTGT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR GCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACATTCTCACCAGAAATATaGTGCCATTCTTTGTTCATG +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTFSPEI*CHSLFM
Trigger: CATGAACAAAGAATGGCAGCATATTTCTGGTGAGAA...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR GCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCTTTGTATTATTTTCCTaGTGCCCTCAAACATCCTTT +
Preference number: 2 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCFVLFS*CPQTSF
Trigger: AAAGGATGTTTGAGGGCAGCAGGAAAATAATACAAA...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR CCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACACCAACTTCACAGATTTaGTCTCAAAGTAAATCTGCT +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTPTSQI*SQSKSA
Trigger: AGCAGATTTACTTTGAGACCAAATCTGTGAAGTTGG...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR TCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGAGGTTTTCACCTCAATaGGTCATCCAATATGTAACG +
Preference number: 2 (lower is better)
Translates to: YIQFLSCACYKFKLPRALRFSPQ*VIQYVT
Trigger: CGTTACATATTGGATGACTCATTGAGGTGAAAACCT...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAGCTGAGAAACCATGGTaGTCACCTCACTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLAEKPW*SPHSVC
Trigger: GCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGC...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGTATTATTTTCCTGCTaGCCTCAAACATCCTTTAAT +
Preference number: 2 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTVLFSC*PQTSFN
Trigger: ATTAAAGGATGTTTGAGGGCAGCAGGAAAATAATAC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCAAGTGTCAGAAAGTATaGCACTTGATAGCAACCTTT +
Preference number: 2 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAKCQKV*HLIATF
Trigger: AAAGGTTGCTATCAAGTGTCATACTTTCTGACACTT...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCCTGCTGCTTTCCAGTaGTTCTTTTCCTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPPAAFQ*FFSWPQ
Trigger: CTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAACAGATAGAAAATACTaGTATGTAGTGTGGGGAATC +
Preference number: 2 (lower is better)
Translates to: QMVTISRATDICSRKAQRTDRKY*YVVWGI
Trigger: GATTCCCCACACTACATATCAGTATTTTCTATCTGT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTGGTTTCTCTCCCACATaGATCCTCAAAAGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILGFSPT*ILKSVR
Trigger: TCTGACACTTTTGAGGATGCATGTGGGAGAGAAACC...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTTCCCTTCCCTGAACTaGAACCTAGGAACTGCCATG +
Preference number: 2 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPFPSLN*NLGTAM
Trigger: CATGGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGATTCTCACCAGAAATATaGTGCCATTCTTTGTTCATG +
Preference number: 2 (lower is better)
Translates to: QMVTISRATDICSRKAQRFSPEI*CHSLFM
Trigger: CATGAACAAAGAATGGCAGCATATTTCTGGTGAGAA...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAGGTTTCTCTCCCACATaGATCCTCAAAAGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLGFSPT*ILKSVR
Trigger: TCTGACACTTTTGAGGATGCATGTGGGAGAGAAACC...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAATCTACAGCCATAGATaGGGCTTCCCAAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSIYSHR*GFPKEA
Trigger: AGCTTCCTTTGGGAAGCCCCATCTATGGCTGTAGAT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGGCACAGAAAATAAATaGCACACTCAGAATATTAAC +
Preference number: 2 (lower is better)
Translates to: QMVTISRATDICSRKAQRGTENK*HTQNIN
Trigger: GTTAATATTCTGAGTGTGCCATTTATTTTCTGTGCC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAAACTATTCCCAGCCCTaGATGAGTTCCAGGAATTGT +
Preference number: 2 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSNYSQP*MSSRNC
Trigger: ACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CAA 90 bp GTGCACTGCTGTGATGTAAATTATGTTTATTCTACTTCAGGTCATTaGAGCTTCTTGAATATGTGGGGGTATTGTTTTCACCAGATTTGG +
Preference number: 2 (lower is better)
Translates to: VHCCDVNYVYSTSGH*SFLNMWGYCFHQIW
Trigger: CCAAATCTGGTGAAAACAATACCCCCACATATTCAAGAAGCTCAAATGACCTGAAGTAGAATAAACATAATTTACATCACAGCAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCTGCTTAGTGACTCTTaGCTCCTCAATTCAAGCTTT +
Preference number: 2 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPLLSDS*LLNSSF
Trigger: AAAGCTTGAATTGAGGAGTCAAGAGTCACTAAGCAG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCATTTTCCTGGCCTCAGTaGAAGTCAGTACTAAGTCAA +
Preference number: 2 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSFSWPQ*KSVLSQ
Trigger: TTGACTTAGTACTGACTTGCACTGAGGCCAGGAAAA...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCATTTCTGTCATGTGCCTaGTACAAATTCAAGCTACCC +
Preference number: 2 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSFLSCA*YKFKLP
Trigger: GGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAA...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAAGCTTCTTGAATATGTaGGGGTATTGTTTTCACCAG +
Preference number: 2 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLSFLNM*GYCFHQ
Trigger: CTGGTGAAAACAATACCCCCACATATTCAAGAAGCT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATCACCAGAAATATGCTaGCATTCTTTGTTCATGTGT +
Preference number: 2 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLSPEIC*HSLFMC
Trigger: ACACATGAACAAAGAATGGCAGCATATTTCTGGTGA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGACTACTCTTCAGTATaGACCTCTGTAGGTATTATT +
Preference number: 2 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSDYSSV*TSVGII
Trigger: AATAATACCTACAGAGGTTCATACTGAAGAGTAGTC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTCACCAGAAATATGCTaGCATTCTTTGTTCATGTGT +
Preference number: 2 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPSPEIC*HSLFMC
Trigger: ACACATGAACAAAGAATGGCAGCATATTTCTGGTGA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR GCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTTTGTATTATTTTCCTaGTGCCCTCAAACATCCTTT +
Preference number: 2 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPFVLFS*CPQTSF
Trigger: AAAGGATGTTTGAGGGCAGCAGGAAAATAATACAAA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp GGAACTGCCATGCGGGGGCAGGCTGAGAAACCATGGTaGTCACCTCACTCTGTCTGCAGTCTCCTGAGGATC +
Preference number: 3 (lower is better)
Translates to: GTAMRGQAEKPW*SPHSVCSLLRI
Trigger: GATCCTCAGGAGACTGCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATGGCAGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 72 bp GAACTGCAACCTAGGAACTGCCATGCGGGGGCAGGCTaGGAAACCATGGTGCTCACCTCACTCTGTCTGCAG +
Preference number: 3 (lower is better)
Translates to: ELQPRNCHAGAG*ETMVLTSLCLQ
Trigger: CTGCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATGGCAGTTCCTAGGTTGCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp CCCATCTCTCCAGTACTTTCCCCTGGAAATTCTAGCTaGTGTGGCCTCCCCAACTGCCAGTCCTGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: PISPVLSPGNSS*CGLPNCQSCLF
Trigger: GAAGAGACAGGACTGGCAGTTGGGGAGGCCACAGCAGCTAGAATTTCCAGGGGAAAGTACTGGAGAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCCACCCAACCAGTGGGTaGGGGAAGCACCCAGTAGTA +
Preference number: 3 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCHPTSG*GKHPVV
Trigger: TACTACTGGGTGCTTCCCCAACCCACTGGTTGGGTG...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 72 bp CAGGCTGAGAAACCATGGTGCTCACCTCACTCTGTCTaGAGTCTCCTGAGGATCACAAACCTGTGCTTGTCC +
Preference number: 3 (lower is better)
Translates to: QAEKPWCSPHSV*SLLRITNLCLS
Trigger: GGACAAGCACAGGTTTGTGATCCTCAGGAGACTGCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CCA 72 bp TCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTaGGGACGAATCTACACTAGACCTGCCTGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: SYPQSCLANTMV*GRIYTRPAWLQ
Trigger: CTGCAGCCAGGCAGGTCTAGTGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR TCA 72 bp TCGCACCTGGCCAGCCTTACCCTTGTAATGAAGCAGTaGAGTACAGCTGGCCCACATCTCAGCCAACATCAT +
Preference number: 3 (lower is better)
Translates to: SHLASLTLVMKQ*STAGPHLSQHH
Trigger: ATGATGTTGGCTGAGATGTGGGCCAGCTGTACTTCACTGCTTCATTACAAGGGTAAGGCTGGCCAGGTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 72 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTaGAACCTAGGAACTGCCATGCGGGGGCAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: QFSEIYCFPSLN*NLGTAMRGQAE
Trigger: CTCAGCCTGCCCCCGCATGGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 72 bp AAGTCAAAGGACTCAGGGGACTCCCAGCAGACTTCTTaGGCCCTGTATCTAGAAGGATCCCATCTCTCCAGT +
Preference number: 3 (lower is better)
Translates to: KSKDSGDSQQTS*ALYLEGSHLSS
Trigger: ACTGGAGAGATGGGATCCTTCTAGATACAGGGCTCAAGAAGTCTGCTGGGAGTCCCCTGAGTCCTTTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp CCTGCTGCTTTCCAGTGCTTCTTTTCCTGGCCTCAGTaGAAGTCAGTACTAAGTCAAAGGACTCAGGGGACT +
Preference number: 3 (lower is better)
Translates to: PAAFQCFFSWPQ*KSVLSQRTQGT
Trigger: AGTCCCCTGAGTCCTTTGACTTAGTACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp TGGTTTGGGGACGAATCTACACTAGACCTGCCTGGCTaGAGTGGTAACACTCCATTGCCTAACTGCTCCTTT +
Preference number: 3 (lower is better)
Translates to: WFGDESTLDLPG*SGNTPLPNCSF
Trigger: AAAGGAGCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTCGTCCCCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 72 bp AAGGAAGTGTCAGTAACAGGTCTGACCTCGCACAGCTaGCCATGCAATGATGAGTGGATCAAACACTACGGC +
Preference number: 3 (lower is better)
Translates to: KEVSVTGLTSHS*PCNDEWIKHYG
Trigger: GCCGTAGTGTTTGATCCACTCATCATTGCATGGGCAGCTGTGCGAGGTCAGACCTGTTACTGACACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR CCA 72 bp GGTCTGACCTCGCACAGCTGCCCATGCAATGATGAGTaGATCAAACACTACGGCTTATACAAGATGCTCCTC +
Preference number: 3 (lower is better)
Translates to: GLTSHSCPCNDE*IKHYGLYKMLL
Trigger: GAGGAGCATCTTGTATAAGCCGTAGTGTTTGATCCACTCATCATTGCATGGGCAGCTGTGCGAGGTCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 72 bp TCCCCTGGAAATTCTAGCTGCTGTGGCCTCCCCAACTaGCAGTCCTGTCTCTTCAATTCAGCGAGATTTATT +
Preference number: 3 (lower is better)
Translates to: SPGNSSCCGLPN*QSCLFNSARFI
Trigger: AATAAATCTCGCTGAATTGAAGAGACAGGACTGGCAGTTGGGGAGGCCACAGCAGCTAGAATTTCCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp GACACAATGCACATGCCTTGTTCATACCCTCAGAGCTaGCTGGCAAATACCATGGTTTGGGGACGAATCTAC +
Preference number: 3 (lower is better)
Translates to: DTMHMPCSYPQS*LANTMVWGRIY
Trigger: GTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAACAAGGCATGTGCATTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR GCA 72 bp GTGTCAGTAACAGGTCTGACCTCGCACAGCTGCCCATaGAATGATGAGTGGATCAAACACTACGGCTTATAC +
Preference number: 3 (lower is better)
Translates to: VSVTGLTSHSCP*NDEWIKHYGLY
Trigger: GTATAAGCCGTAGTGTTTGATCCACTCATCATTGCATGGGCAGCTGTGCGAGGTCAGACCTGTTACTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR TCA 72 bp CATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTaGAGGAATAGGCTTCTAACTCAGATGATGCAGTCT +
Preference number: 3 (lower is better)
Translates to: HVPATNSSYPEP*RNRLLTQMMQS
Trigger: AGACTGCATCATCTGAGTTAGAAGCCTATTCCTTCAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGGTCATTTGAGCTTCTaGAATATGTGGGGGTATTGT +
Preference number: 3 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQGHLSF*NMWGYC
Trigger: ACAATACCCCCACATATTCAAGAAGCTCAAATGACC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CCA 72 bp ATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCCTaGCCTCAGTGCAAGTCAGTACTAAGTCAAAGGACT +
Preference number: 3 (lower is better)
Translates to: IVQPAAFQCFFS*PQCKSVLSQRT
Trigger: AGTCCTTTGACTTAGTACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp GCAGATCCACAATACATACAATTTCTGTCATGTGCCTaGTACAAATTCAAGCTACCCCGAGCCCTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: ADPQYIQFLSCA*YKFKLPRALKE
Trigger: TTCCTTCAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTATTGTGGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGCTCTTTTAATATCCTaGTCTACTAATTCCATCACC +
Preference number: 3 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTALLIS*STNSIT
Trigger: GGTGATGGAATTAGTAGACAAGGATATTAAAAGAGC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR CAA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGGGTCATTTGAGCTTCTaGAATATGTGGGGGTATTGT +
Preference number: 3 (lower is better)
Translates to: YIQFLSCACYKFKLPRALGHLSF*NMWGYC
Trigger: ACAATACCCCCACATATTCAAGAAGCTCAAATGACC...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 72 bp CTCTCCCACATGCATCCTCAAAAGTGTCAGAAAGTATaGCACTTGATAGCAACCTTTCTGCATTCGCCAAAG +
Preference number: 3 (lower is better)
Translates to: LSHMHPQKCQKV*HLIATFLHSPK
Trigger: CTTTGGCGAATGCAGAAAGGTTGCTATCAAGTGTCATACTTTCTGACACTTTTGAGGATGCATGTGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAATTCAGCGAGATTTATaGTTTCCCTTCCCTGAACTG +
Preference number: 3 (lower is better)
Translates to: QMVTISRATDICSRKAQRIQRDL*FPFPEL
Trigger: CAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAAT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 72 bp TATAGCTTCCAGTTGTTTAAGGCAGGAGAGGAAATCTaGCCCTTGTTATTCCATCACAGCAGTAAGGAGAAC +
Preference number: 3 (lower is better)
Translates to: YSFQLFKAGEEI*PLLFHHSSKEN
Trigger: GTTCTCCTTACTGCTGTGATGGAATAACAAGGGTCAGATTTCCTCTCCTGCCTTAAACAACTGGAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCTCCCAGCAGACTTCTaGAGCCCTGTATCTAGAAGG +
Preference number: 3 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPLPADF*SPVSRR
Trigger: CCTTCTAGATACAGGGCTCAAGAAGTCTGCTGGGAG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGAATATGTGGGGGTATaGTTTTCACCAGATTTGGAA +
Preference number: 3 (lower is better)
Translates to: QMVTISRATDICSRKAQREYVGV*FSPDLE
Trigger: TTCCAAATCTGGTGAAAACAATACCCCCACATATTC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGATCTACTTCAGGTCATTaGAGCTTCTTGAATATGTGG +
Preference number: 3 (lower is better)
Translates to: QMVTISRATDICSRKAQRSTSGH*SFLNMW
Trigger: CCACATATTCAAGAAGCTCAAATGACCTGAAGTAGA...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 72 bp GCACTACTAAAACAAAACCTTTCTGAGAATTCTACCTaGTGCTCCATGTGTTTCCACTCTGTTTCCACTCTG +
Preference number: 3 (lower is better)
Translates to: ALLKQNLSENST*CSMCFHSVSTL
Trigger: CAGAGTGGAAACAGAGTGGAAACACATGGAGCATCAGGTAGAATTCTCAGAAAGGTTTTGTTTTAGTAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CCA 72 bp ATTGTACAGCATAACACTTTAGAGAGCTGGGAAGTATaGGACATCATTCCCGTCTTTCTTCACTCAGTAACT +
Preference number: 3 (lower is better)
Translates to: IVQHNTLESWEV*DIIPVFLHSVT
Trigger: AGTTACTGAGTGAAGAAAGACGGGAATGATGTCCCATACTTCCCAGCTCTCTAAAGTGTTATGCTGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCTCTAGGTTGCAGGGTTaGTTGTTTATTTCATTAAGG +
Preference number: 3 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETSRLQG*LFISLR
Trigger: CCTTAATGAAATAAACAACAAACCCTGCAACCTAGA...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTATTCAGCGAGATTTATaGTTTCCCTTCCCTGAACTG +
Preference number: 3 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILIQRDL*FPFPEL
Trigger: CAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAAT...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGTAGTGTGGGGAATCTaGAGACATTTCAGCCTATGC +
Preference number: 3 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSVVWGI*RHFSLC
Trigger: GCATAGGCTGAAATGTCTCAAGATTCCCCACACTAC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp ATGATGAGTGGATCAAACACTACGGCTTATACAAGATaGTCCTCACAGAATGAAAAACAGCTGCTCATTTTC +
Preference number: 3 (lower is better)
Translates to: MMSGSNTTAYTR*SSQNEKQLLIF
Trigger: GAAAATGAGCAGCTGTTTTTCATTCTGTGAGGAGCATCTTGTATAAGCCGTAGTGTTTGATCCACTCATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR TCA 72 bp GTGGTAACACTCCATTGCCTAACTGCTCCTTTCACATaGGCACGCACTAATGAAAATAAAAAGTTAATTCAC +
Preference number: 3 (lower is better)
Translates to: VVTLHCLTAPFT*ARTNENKKLIH
Trigger: GTGAATTAACTTTTTATTTTCATTAGTGCGTGCTCATGTGAAAGGAGCAGTTAGGCAATGGAGTGTTACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360187.9
3UTR-3UTR CAA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTACAAGTGTACAGTGAGTaGTCCTTTCTTGAAATCTTC +
Preference number: 3 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLQVYSE*SFLEIF
Trigger: GAAGATTTCAAGAAAGGACAACTCACTGTACACTTG...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 72 bp TCTACTATCACAACACTAATAAGGTTTTCACCTCAATaGGTCATCCAATATGTAACGAGTAGTGTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: STITTLIRFSPQ*VIQYVTSSVFW
Trigger: CCAGAAGACACTACTCGTTACATATTGGATGACTCATTGAGGTGAAAACCTTATTAGTGTTGTGATAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR TCA 72 bp TTTCTACTGCATTGTCCAGATACAGATAGAAAATACTaGTATGTAGTGTGGGGAATCTTGAGACATTTCAGC +
Preference number: 3 (lower is better)
Translates to: FLLHCPDTDRKY*YVVWGILRHFS
Trigger: GCTGAAATGTCTCAAGATTCCCCACACTACATATCAGTATTTTCTATCTGTATCTGGACAATGCAGTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp ATCAGTGCTTTTCATGAATGTGACTCTGAGGTGCACTaGTGTGATGTAAATTATGTTTATTCTACTTCAGGT +
Preference number: 3 (lower is better)
Translates to: ISAFHECDSEVH*CDVNYVYSTSG
Trigger: ACCTGAAGTAGAATAAACATAATTTACATCACAGCAGTGCACCTCAGAGTCACATTCATGAAAAGCACTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp ACAGACCCAAACTTAAGTTTTGTATTATTTTCCTGCTaGCCTCAAACATCCTTTAATGTTTCCCAAAGACAG +
Preference number: 3 (lower is better)
Translates to: TDPNLSFVLFSC*PQTSFNVSQRQ
Trigger: CTGTCTTTGGGAAACATTAAAGGATGTTTGAGGGCAGCAGGAAAATAATACAAAACTTAAGTTTGGGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR-3UTR CAA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCAAGTGTACAGTGAGTaGTCCTTTCTTGAAATCTTC +
Preference number: 3 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPQVYSE*SFLEIF
Trigger: GAAGATTTCAAGAAAGGACAACTCACTGTACACTTG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp TGTACAGACCCAAACTTAAGTTTTGTATTATTTTCCTaGTGCCCTCAAACATCCTTTAATGTTTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: CTDPNLSFVLFS*CPQTSFNVSQR
Trigger: TCTTTGGGAAACATTAAAGGATGTTTGAGGGCAGCAGGAAAATAATACAAAACTTAAGTTTGGGTCTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR GCA 72 bp AGGAATTTAGAGATAATACTCCATTGTCTTATAGCTTaGATAGTTCTCACCAGAAATATGCTGCCATTCTTT +
Preference number: 3 (lower is better)
Translates to: RNLEIILHCLIA*IVLTRNMLPFF
Trigger: AAAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGTATTATCTCTAAATTCCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGGGGGTGCTGCCCTCTaGTGGGCCTCTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQGGAAL*WASLAV
Trigger: GACTGCCAAAGAGGCCCAGCAGAGGGCAGCACCCCC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGCATGCGGGGGCAGGCTaGGAAACCATGGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQHAGAG*ETMVLT
Trigger: GGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATG...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGGGGGGTGCTGCCCTCTaGTGGGCCTCTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALGGAAL*WASLAV
Trigger: GACTGCCAAAGAGGCCCAGCAGAGGGCAGCACCCCC...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGAGGCATGAGCCACCATaGCCGGCCCTGGCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQRHEPP*PALASN
Trigger: ATTACTGGCCAGGGCCGGGCATGGTGGCTCATGCCT...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGCTGGTCGCGAACTCCTaGACTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQLVANS*TQVIHP
Trigger: TGGGTGGATCACCTGAGTTCAGGAGTTCGCGACCAG...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCGTTCCAGAGGGCTATTaGCCCTCGGACCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAVPEGY*PSDLAG
Trigger: CCCTGCGAGGTCCGAGGGGCAATAGCCCTCTGGAAC...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392321.3
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGTGATCTCGGCTCACTaGAACCTCCTCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQVISAH*NLLLPG
Trigger: ACCTGGGAGGAGGAGGTTGCAGTGAGCCGAGATCAC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCGGTGCTGCCCTCTGCTaGGCCTCTTTGGCAGTCGAC +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAGAALC*ASLAVD
Trigger: GTCGACTGCCAAAGAGGCCCAGCAGAGGGCAGCACC...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACACCAGTGTGTGTTCTGTaGTGCGTTAGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTPVCVL*CVRSWD
Trigger: GTCCCAGCTCCTAACGCATCACAGAACACACACTGG...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCCAGTGTGTGTTCTGTaGTGCGTTAGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFPVCVL*CVRSWD
Trigger: GTCCCAGCTCCTAACGCATCACAGAACACACACTGG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTGCTGCGACTTCCTGTTaGAGGTGGTCCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFAATSC*RWSHTH
Trigger: ATGAGTGTGGGACCACCTTCAACAGGAAGTCGCAGC...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGTCACTCAGGCTGGAATaGAGTGGCCCCATCATGGCT +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQSLRLE*SGPIMA
Trigger: AGCCATGATGGGGCCACTGCATTCCAGCCTGAGTGA...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAAGGTTTGTGTCCAGCTaGAGAGAAGGCCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTRFVSS*REGLVD
Trigger: GTCCACCAGGCCTTCTCTCCAGCTGGACACAAACCT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGCTATGTTGTCCAGCTaGTCTCAAACGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQAMLSS*SQTPGL
Trigger: GAGCCCAGGCGTTTGAGACCAGCTGGACAACATAGC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCTCCTCTCCTCCCAGCTaGGCCTCCCAAAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETSSPPS*ASQSPG
Trigger: CCCAGGACTTTGGGAGGCCCAGCTGGGAGGAGAGGA...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAAGCTACCCCGAGCCCTaGAGGAATAGGCTTCTAACT +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTSYPEP*RNRLLT
Trigger: AGTTAGAAGCCTATTCCTTCAGGGCTCGGGGTAGCT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAATGGTCTCAATCTCCTaGCCTCGTGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTMVSIS*PRDPPI
Trigger: GATGGGTGGATCACGAGGTCAGGAGATTGAGACCAT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGCCTGCTGCTTTCCAGTaGTTCTTTTCCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQPAAFQ*FFSWPQ
Trigger: CTGAGGCCAGGAAAAGAAGCACTGGAAAGCAGCAGG...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCTAGACCTGCCTGGCTaGAGTGGTAACACTCCATTG +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFLDLPG*SGNTPL
Trigger: CAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCACACAGAAGCTACCATaGTCCAGGCAGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACTQKLP*SRQEEG
Trigger: CCCTTCCTCCTGCCTGGACCATGGTAGCTTCTGTGT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCAGGTTTGTGTCCAGCTaGAGAGAAGGCCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACRFVSS*REGLVD
Trigger: GTCCACCAGGCCTTCTCTCCAGCTGGACACAAACCT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTGCAACATCGGCTTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFATSAS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAAGCCGATGTTGC...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACACCTGTGTGTGTTATGTaGTTAGCAGTGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTPVCVM*LAVSHG
Trigger: GCCATGGCTCACTGCTAATCACATAACACACACAGG...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGCTGACCTCGCACAGCTaGCCATGCAATGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALLTSHS*PCNDEW
Trigger: CCACTCATCATTGCATGGGCAGCTGTGCGAGGTCAG...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCTTCTCCTCCCACCTCTaGTATCTCCCACTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCFSSHL*YLPLFK
Trigger: TTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCATCTACAGCCATAGATaGGGCTTCCCAAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCIYSHR*GFPKEA
Trigger: AGCTTCCTTTGGGAAGCCCCATCTATGGCTGTAGAT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAATGGGAAAGGTGGTGTaGATTCGTGGACGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTMGKVV*IRGRSL
Trigger: GAGACTTCGTCCACGAATCCACACCACCTTTCCCAT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTGCAACCTCCAACTCCTaGGTTCATGTGATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFATSNS*VHVICP
Trigger: TGGGCAAATCACATGAACCCAGGAGTTGGAGGTTGC...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCCCTGTGTGTGTTATGTaGTTAGCAGTGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACPVCVM*LAVSHG
Trigger: GCCATGGCTCACTGCTAATCACATAACACACACAGG...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGAAGTGAGTTCCTGCTaGAGGCTTTTTGACACTCAC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTEVSSC*RLFDTH
Trigger: GTGAGTGTCAAAAAGCCTTCAGCAGGAACTCACTTC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGAAGTGAGTTCCTGCTaGAGGCTTTTTGACACTCAC +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQEVSSC*RLFDTH
Trigger: GTGAGTGTCAAAAAGCCTTCAGCAGGAACTCACTTC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCATGCCTAATGAGAAGTaGGTTCCTGCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCMPNEK*VPAEGF
Trigger: AAAGCCTTCAGCAGGAACTCACTTCTCATTAGGCAT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGCTGCGACTTCCTGTTaGAGGTGGTCCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRAATSC*RWSHTH
Trigger: ATGAGTGTGGGACCACCTTCAACAGGAAGTCGCAGC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCCTCCCAGGTACAAGTaGTTCTCTTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAPPRYK*FSCLSL
Trigger: GAGGCTGAGACAAGAGAATCACTTGTACCTGGGAGG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGCTTTCTGACATTCGCTaGACCCATGCGGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQLSDIR*THAVFL
Trigger: GAGAAAAACCGCATGGGTGCAGCGAATGTCAGAAAG...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCTTGCCCAGACTGGAGTaGAATGCCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETLPRLE*NAVISA
Trigger: AGCCGAGATCACGGCATTGCACTCCAGTCTGGGCAA...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCCTCGGAGCCACATTTTaGGATTATCTAGCCAGACTT +
Preference number: 4 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCLGATF*DYLARL
Trigger: AAGTCTGGCTAGATAATCCCAAAATGTGGCTCCGAG...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCAGGCTGAGAAACCATaGTGCTCACCTCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAQAEKP*CSPHSV
Trigger: GACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTGGTGCTGCCCTCTGCTaGGCCTCTTTGGCAGTCGAC +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILGAALC*ASLAVD
Trigger: GTCGACTGCCAAAGAGGCCCAGCAGAGGGCAGCACC...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCGCAGTGAAGTACAGCTaGCCCACATCTCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAAVKYS*PTSQPT
Trigger: TGTTGGCTGAGATGTGGGCCAGCTGTACTTCACTGC...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCCTGTACAAGTTCTTCTaGGTAGGATTAAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCLYKFF*VGLSSC
Trigger: GCAGCTACTTAATCCTACTCAGAAGAACTTGTACAG...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCATTCCCAGCCCTGCATaGGTTCCAGGAATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAIPSPA*VPGIVQ
Trigger: CTGAACAATTCCTGGAACTCATGCAGGGCTGGGAAT...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTTTCCACTCTGGCTGCTaGGAACATAAACTATTCCCA +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFFHSGC*EHKLFP
Trigger: TGGGAATAGTTTATGTTCTCAGCAGCCAGAGTGGAA...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTTCTGAGAATTCTACCTaGTGCTCCATGTGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFSENST*CSMCFH
Trigger: GTGGAAACACATGGAGCATCAGGTAGAATTCTCAGA...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCAGCTACCCCGAGCCCTaGAGGAATAGGCTTCTAACT +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETSYPEP*RNRLLT
Trigger: AGTTAGAAGCCTATTCCTTCAGGGCTCGGGGTAGCT...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCAATCTCCAGAGCCACTaGCATATGCAGCAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACNLQSH*HMQQKS
Trigger: GCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCCTTGTAATGAAGCAGTaGAGTACAGCTGGCCCACAT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACLVMKQ*STAGPH
Trigger: ATGTGGGCCAGCTGTACTTCACTGCTTCATTACAAG...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGCCATGGCTCTTCGTTaGTGGATTTTCTACATGTAC +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQAMALR*WIFYMY
Trigger: GTACATGTAGAAAATCCAGCAACGAAGAGCCATGGC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCCTCCTCACAATCACTaGATCGATAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFPPHNH*IDSSSL
Trigger: GAGAGAAGAACTATCGATGCAGTGATTGTGAGGAGG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTAACTATTCCCAGCCCTaGATGAGTTCCAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFNYSQP*MSSRNC
Trigger: ACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACATCAGCCTATGCACTATaGGGCACTTGTACTGATAAC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTSAYAL*GTCTDN
Trigger: GTTATCAGTACAAGTGCCGCATAGTGCATAGGCTGA...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTTGTGGAGAACAAAGTaGCACTATGTTGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACLWRTK*HYVAQA
Trigger: AGCCTGGGCAACATAGTGGCACTTTGTTCTCCACAA...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGTGGTAACACTCCATTaGCTAACTGCTCCTTTCACA +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQVVTLH*LTAPFT
Trigger: TGTGAAAGGAGCAGTTAGGCAATGGAGTGTTACCAC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTCATACCCTCAGAGCTaGCTGGCAAATACCATGGTT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACSYPQS*LANTMV
Trigger: AACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGA...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCTCGGAGCCACATTTTaGGATTATCTAGCCAGACTT +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFLGATF*DYLARL
Trigger: AAGTCTGGCTAGATAATCCCAAAATGTGGCTCCGAG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAATTAGCAGTGAGCCATaGCTCTTCGTTGCTGGATTT +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTISSEP*LFVAGF
Trigger: AAATCCAGCAACGAAGAGCCATGGCTCACTGCTAAT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTATGCCTAAGAAGCTGTaGCTTCCAGGCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFMPKKL*LPGKSF
Trigger: AAAGCTTTTGCCTGGAAGCCACAGCTTCTTAGGCAT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCATCTACAGCCATAGATaGGGCTTCCCAAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACIYSHR*GFPKEA
Trigger: AGCTTCCTTTGGGAAGCCCCATCTATGGCTGTAGAT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTATCATGGAGAGGGAATaGTGTCAACTGAAACCGAGA +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFIMERE*CQLKPR
Trigger: TCTCGGTTTCAGTTGACACCATTCCCTCTCCATGAT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCGCCTGGCAAATACCATaGTTTGGGGACGAATCTACA +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACAWQIP*FGDEST
Trigger: TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGC...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAACCCTCAGAGCTGCCTaGCAAATACCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRTLRAA*QIPWFG
Trigger: CCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAATTGTGTGCGTTATCTaGTGTCTTTTAAGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTIVCVI*CLLSCD
Trigger: GTCGCAGCTTAAAAGACATCAGATAACGCACACAAT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCACATGCGGGGGCAGGCTaGGAAACCATGGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSHAGAG*ETMVLT
Trigger: GGTGAGCACCATGGTTTCTCAGCCTGCCCCCGCATG...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCATTCCCAGCCCTGCATaGGTTCCAGGAATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETIPSPA*VPGIVQ
Trigger: CTGAACAATTCCTGGAACTCATGCAGGGCTGGGAAT...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCGAAAAAGCACTACTGTaGAGCCTAACGGCAATTATT +
Preference number: 4 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCEKALL*SLTAII
Trigger: AATAATTGCCGTTAGGCTTCACAGTAGTGCTTTTTC...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGGCATGGGAGAATCCTaGTGGTGGAAATCATTTTAT +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQGMGES*WWKSFY
Trigger: ATAAAATGATTTCCACCATCAGGATTCTCCCATGCC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGATTCCCTTCCCTGAACTaGAACCTAGGAACTGCCATG +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRFPSLN*NLGTAM
Trigger: CATGGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAA...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGTTTTCCTGGCCTCAGTaGAAGTCAGTACTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQFSWPQ*KSVLSQ
Trigger: TTGACTTAGTACTGACTTGCACTGAGGCCAGGAAAA...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTAATTGTTCAGCCTGCTaGTTTCCAGTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFNCSAC*FPVLLF
Trigger: GAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGAGAGCCACTGACATATaGAGCAGAAAAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQRATDI*SRKAQR
Trigger: TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCT...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTCCCATCATGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILPIMAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCATGATGGG...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCAAAGTGCCACTATGTTaGCCAGGCTGGCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETKVPLC*PGWPQT
Trigger: AGTTTGAGGCCAGCCTGGGCAACATAGTGGCACTTT...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCACTCCATTGCCTAACTaGTCCTTTCACATGAGCACG +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTATPLPN*SFHMST
Trigger: CGTGCTCATGTGAAAGGAGCAGTTAGGCAATGGAGT...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCAGGACACAATGCACATaGCTTGTTCATACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACRTQCT*LVHTLR
Trigger: TCTGAGGGTATGAACAAGGCATGTGCATTGTGTCCT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGCAGTGCTTCTTTTCCTaGCCTCAGTGCAAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALQCFFS*PQCKSV
Trigger: TACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTG...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCGAGAGCTGGGAAGTATaGGACATCATTCCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAESWEV*DIIPVF
Trigger: AAAGACGGGAATGATGTCCCATACTTCCCAGCTCTC...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAATGGGAAAGGTGGTGTaGATTCGTGGACGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRMGKVV*IRGRSL
Trigger: GAGACTTCGTCCACGAATCCACACCACCTTTCCCAT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCTTTTAAGGTTGTCTTaGTTATCTCGGAGCCACATT +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFLLRLS*LSRSHI
Trigger: AATGTGGCTCCGAGATAATCAAGACAACCTTAAAAG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGGGTTCTGCCAGGTTTaGTACAGAACAATAATTTCT +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTGFCQV*YRTIIS
Trigger: AGAAATTATTGTTCTGTATCAAACCTGGCAGAACCC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGATGCCTAATGAGAAGTaGGTTCCTGCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALMPNEK*VPAEGF
Trigger: AAAGCCTTCAGCAGGAACTCACTTCTCATTAGGCAT...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCCTGCTTAGTGACTCTTaGCTCCTCAATTCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACLLSDS*LLNSSF
Trigger: AAAGCTTGAATTGAGGAGTCAAGAGTCACTAAGCAG...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGCGTAATCTTGACTACTaGAGGGTAAAGACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALRNLDY*RVKTCP
Trigger: TGGGCAAGTCTTTACCCTTCAGTAGTCAAGATTACG...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCGTAATCTTGACTACTaGAGGGTAAAGACTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTARNLDY*RVKTCP
Trigger: TGGGCAAGTCTTTACCCTTCAGTAGTCAAGATTACG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCACTGCTCCTTTCACATaGGCACGCACTAATGAAAAT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACTAPFT*ARTNEN
Trigger: ATTTTCATTAGTGCGTGCTCATGTGAAAGGAGCAGT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCGCCATGGCTCTTCGTTaGTGGATTTTCTACATGTAC +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAAMALR*WIFYMY
Trigger: GTACATGTAGAAAATCCAGCAACGAAGAGCCATGGC...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTATCTGCCACATTCCATaGATAAATAGACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFICHIP*INRLLC
Trigger: ACACAGGAGTCTATTTATGCATGGAATGTGGCAGAT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCTTTACATTTCTTCACTaGCCATGGACCAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAFTFLH*PWTRPL
Trigger: AAGTGGCCTGGTCCATGGGCAGTGAAGAAATGTAAA...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGACTTTCTGACATTCGCTaGACCCATGCGGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRLSDIR*THAVFL
Trigger: GAGAAAAACCGCATGGGTGCAGCGAATGTCAGAAAG...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCGGTTTCTCTCCCACATaGATCCTCAAAAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAGFSPT*ILKSVR
Trigger: TCTGACACTTTTGAGGATGCATGTGGGAGAGAAACC...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTTTTCCTGGCCTCAGTaGAAGTCAGTACTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACFSWPQ*KSVLSQ
Trigger: TTGACTTAGTACTGACTTGCACTGAGGCCAGGAAAA...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGAATGATATCTGTGACTaGATCATTTTCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQNDICD*IIFRCS
Trigger: AGAGCAGCGGAAAATGATCCAGTCACAGATATCATT...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCTTCTCCTCCCACCTCTaGTATCTCCCACTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETFSSHL*YLPLFK
Trigger: TTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGAGAGCTGGGAAGTATaGGACATCATTCCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRESWEV*DIIPVF
Trigger: AAAGACGGGAATGATGTCCCATACTTCCCAGCTCTC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGCGGTCCTCCCAATTTaGCCTCCCCAAGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSAVLPI*PPQALG
Trigger: TCCCAGTGCTTGGGGAGGCCAAATTGGGAGGACCGC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAAGCTTCCCAAGTAGCTaGGATTACAGACATGCACCA +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRSFPSS*DYRHAP
Trigger: TGGTGCATGTCTGTAATCCCAGCTACTTGGGAAGCT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTATGATGAATGAGACTTaGCTTCTCACTGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFMMNET*LLTEGF
Trigger: AAAACCTTCAGTGAGAAGTCAAGTCTCATTCATCAT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTACAGATAGAAAATACTaGTATGTAGTGTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFTDRKY*YVVWGI
Trigger: GATTCCCCACACTACATATCAGTATTTTCTATCTGT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGACAGATAGAAAATACTaGTATGTAGTGTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQTDRKY*YVVWGI
Trigger: GATTCCCCACACTACATATCAGTATTTTCTATCTGT...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTTCTTCACTCAGTAACTaGTTATCTTGTTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ALHEFQELFSLLLSSASFSSLSN*LSCFLS
Trigger: GGACAAGAAACAAGATAATCAGTTACTGAGTGAAGA...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAACGAATGGTAGCAGATaGTGGGTCAGGGGTATTTTA +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRTNGSR*WVRGIL
Trigger: TAAAATACCCCTGACCCATCATCTGCTACCATTCGT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAAGGTTAGAGATTACATaGATTATCCACAACGAATGG +
Preference number: 4 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTRLEIT*IIHNEW
Trigger: CCATTCGTTGTGGATAATTCATGTAATCTCTAACCT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGCTCCTGAACTCAAGTaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSAPELK*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCACTTGAGTTCAGGAGC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCGTAGGATTAAGTAGCTaGCATTCCTCCAGCGTGAAA +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETVGLSS*HSSSVK
Trigger: TTTCACGCTGGAGGAATGGCAGCTACTTAATCCTAC...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGTAGGATTAAGTAGCTaGCATTCCTCCAGCGTGAAA +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRVGLSS*HSSSVK
Trigger: TTTCACGCTGGAGGAATGGCAGCTACTTAATCCTAC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGACCTCCTCACAATCACTaGATCGATAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRPPHNH*IDSSSL
Trigger: GAGAGAAGAACTATCGATGCAGTGATTGTGAGGAGG...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGCTTTTGCACAATCGCTaGATCCATAGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALLLHNR*IHRFSL
Trigger: GAGAGAAAACCTATGGATGCAGCGATTGTGCAAAAG...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCTTTTGCACAATCGCTaGATCCATAGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTALLHNR*IHRFSL
Trigger: GAGAGAAAACCTATGGATGCAGCGATTGTGCAAAAG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGAATTGTTCAGCCTGCTaGTTTCCAGTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALNCSAC*FPVLLF
Trigger: GAAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATT...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAAGACATTTCAGCCTATaGACTATGCGGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRRHFSL*TMRHLY
Trigger: GTACAAGTGCCGCATAGTGCATAGGCTGAAATGTCT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCTGGGATTACAGACATaGACCATCATGGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTALGLQT*TIMANF
Trigger: AAAGTTAGCCATGATGGTGCATGTCTGTAATCCCAG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATGGGTTCATGTGATTTaGCCACCTCAGCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLWVHVI*PPQPPE
Trigger: CTCGGGAGGCTGAGGTGGGCAAATCACATGAACCCA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAGGAGTGCAGTGGTGGTaGCATCTTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLGVQWW*HLGSLQ
Trigger: TTGCAGTGAGCCAAGATGGCACCACCACTGCACTCC...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCATGGCTCTTCGTTGCTaGATTTTCTACATGTACTGC +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAMALRC*IFYMYC
Trigger: GCAGTACATGTAGAAAATCCAGCAACGAAGAGCCAT...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAACACAGAAGCTACCATaGTCCAGGCAGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLTQKLP*SRQEEG
Trigger: CCCTTCCTCCTGCCTGGACCATGGTAGCTTCTGTGT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCCATGCAATGATGAGTaGATCAAACACTACGGCTTA +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAPCNDE*IKHYGL
Trigger: TAAGCCGTAGTGTTTGATCCACTCATCATTGCATGG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCCTGTACAAGTTCTTCTaGGTAGGATTAAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETLYKFF*VGLSSC
Trigger: GCAGCTACTTAATCCTACTCAGAAGAACTTGTACAG...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCTTTTAAGGTTGTCTTaGTTATCTCGGAGCCACATT +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTALLRLS*LSRSHI
Trigger: AATGTGGCTCCGAGATAATCAAGACAACCTTAAAAG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCAAGTGTCAGAAAGTATaGCACTTGATAGCAACCTTT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACKCQKV*HLIATF
Trigger: AAAGGTTGCTATCAAGTGTCATACTTTCTGACACTT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTGCAGCATATTTCCGGTaGGAACTGATGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILAAYFR*ELMGKV
Trigger: CACCTTTCCCATCAGTTCTCACCGGAAATATGCTGC...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCGAAAAAGCACTACTGTaGAGCCTAACGGCAATTATT +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAEKALL*SLTAII
Trigger: AATAATTGCCGTTAGGCTTCACAGTAGTGCTTTTTC...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGATGCTCCTCACAGAATaGAAAACAGCTGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALMLLTE*KTAAHF
Trigger: AAAATGAGCAGCTGTTTTTCATTCTGTGAGGAGCAT...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGATCTGCCACATTCCATaGATAAATAGACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALICHIP*INRLLC
Trigger: ACACAGGAGTCTATTTATGCATGGAATGTGGCAGAT...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGGTTCCAGAGGGCTATTaGACTTTACATTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALVPEGY*TLHFFT
Trigger: AGTGAAGAAATGTAAAGTGCAATAGCCCTCTGGAAC...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAAGAGCCACTGACATATaGAGCAGAAAAGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRRATDI*SRKAQR
Trigger: TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGCCATCTTGGCTCACTaGAACCTCCAACTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSAILAH*NLQLLG
Trigger: ACCCAGGAGTTGGAGGTTGCAGTGAGCCAAGATGGC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCATGGCTCTTCGTTGCTaGATTTTCTACATGTACTGC +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETMALRC*IFYMYC
Trigger: GCAGTACATGTAGAAAATCCAGCAACGAAGAGCCAT...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCGATCGCAGTCCTACATaGACAATGTTTATGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETDRSPT*TMFMLE
Trigger: TTCAAGCATAAACATTGTTCATGTAGGACTGCGATC...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGGGTTCTGCCAGGTTTaGTACAGAACAATAATTTCT +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRGFCQV*YRTIIS
Trigger: AGAAATTATTGTTCTGTATCAAACCTGGCAGAACCC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTCAGAGCCAAAGAACTaGAGGACACGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPSEPKN*RTRSCT
Trigger: TGTGCAGCTGCGTGTCCTTCAGTTCTTTGGCTCTGA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCACCAGGCCACTTAGATaGAGCCAGACACGGAATCAG +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPTRPLR*SQTRNQ
Trigger: CTGATTCCGTGTCTGGCTTCATCTAAGTGGCCTGGT...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCATGATGAATGAGACTTaGCTTCTCACTGAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAMMNET*LLTEGF
Trigger: AAAACCTTCAGTGAGAAGTCAAGTCTCATTCATCAT...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGATGCCTCATAAGGTGTaGCTTTCTTGTGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALMPHKV*LSCERF
Trigger: AAATCTTTCACAAGAAAGTCACACCTTATGAGGCAT...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGGACTACTCTTCAGTATaGACCTCTGTAGGTATTATT +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALDYSSV*TSVGII
Trigger: AATAATACCTACAGAGGTTCATACTGAAGAGTAGTC...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTAATCTCCAGAGCCACTaGCATATGCAGCAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILNLQSH*HMQQKS
Trigger: GCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATT...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCTCTTCACTCAGTAACTaGTTATCTTGTTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTASSLSN*LSCFLS
Trigger: GGACAAGAAACAAGATAATCAGTTACTGAGTGAAGA...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCAAATGCAAATCCAAGTaGAAGGAAAAAGCACTACTG +
Preference number: 4 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTAKCKSK*KEKALL
Trigger: CAGTAGTGCTTTTTCCTTTCACTTGGATTTGCATTT...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCACTGCTCTTGAGCTCCTaGACTCAAGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSLLLSS*TQVIHP
Trigger: TGGGTGGATCACTTGAGTTCAGGAGCTCAAGAGCAG...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGCTGAGAAACCATGGTaGTCACCTCACTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSAEKPW*SPHSVC
Trigger: GCAGACAGAGTGAGGTGAGCACCATGGTTTCTCAGC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATTCCCTTCCCTGAACTaGAACCTAGGAACTGCCATG +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLFPSLN*NLGTAM
Trigger: CATGGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCGTATTATTTTCCTGCTaGCCTCAAACATCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACVLFSC*PQTSFN
Trigger: ATTAAAGGATGTTTGAGGGCAGCAGGAAAATAATAC...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTTTGTATTATTTTCCTaGTGCCCTCAAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: ENINYSQPCMSSRNCSACFVLFS*CPQTSF
Trigger: AAAGGATGTTTGAGGGCAGCAGGAAAATAATACAAA...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCAGGCTGAGAAACCATaGTGCTCACCTCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPQAEKP*CSPHSV
Trigger: GACAGAGTGAGGTGAGCACCATGGTTTCTCAGCCTG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAAGGTTAGAGATTACATaGATTATCCACAACGAATGG +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRRLEIT*IIHNEW
Trigger: CCATTCGTTGTGGATAATTCATGTAATCTCTAACCT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGCAGCATATTTCCGGTaGGAACTGATGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSAAYFR*ELMGKV
Trigger: CACCTTTCCCATCAGTTCTCACCGGAAATATGCTGC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGATCACCAGAAATATGCTaGCATTCTTTGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRSPEIC*HSLFMC
Trigger: ACACATGAACAAAGAATGGCAGCATATTTCTGGTGA...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCACAATTTCTGTCATGTaGCTGCTACAAATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETTISVM*LLQIQA
Trigger: AGCTTGAATTTGTAGCAGGCACATGACAGAAATTGT...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTCACAACAGGACACAATaGACATGCCTTGTTCATACC +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILHNRTQ*TCLVHT
Trigger: GGTATGAACAAGGCATGTGCATTGTGTCCTGTTGTG...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATCGCACAGCTGCCCATaGAATGATGAGTGGATCAAA +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLSHSCP*NDEWIK
Trigger: TTTGATCCACTCATCATTGCATGGGCAGCTGTGCGA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAAAACCAGAGTTTATTTaGAAATTGCTCCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRKPEFI*KLLPVI
Trigger: GATCACTGGGAGCAATTTGCAAATAAACTCTGGTTT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGTTCCAGTTTGAACATTaGATCAGGTTTGAGAATTTG +
Preference number: 4 (lower is better)
Translates to: YIQFLSCACYKFKLPRALFQFEH*IRFENL
Trigger: CAAATTCTCAAACCTGATGCAATGTTCAAACTGGAA...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392321.3
CDS-3UTR CCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAATGTTTAATCAGCTGTaGTTTTCTGATGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRMFNQL*FSDEGF
Trigger: GAAGCCTTCATCAGAAAACCACAGCTGATTAAACAT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCGCAGGAGAGGAAATCTaGCCCTTGTTATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPAGEEI*PLLFHH
Trigger: GTGATGGAATAACAAGGGTCAGATTTCCTCTCCTGC...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATGGATCATTTTCCGCTaGTCTTGGGAAATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLWIIFR*SWEICC
Trigger: ACAGCAGATTTCCCAAGAGCAGCGGAAAATGATCCA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAAACTATTCCCAGCCCTaGATGAGTTCCAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLNYSQP*MSSRNC
Trigger: ACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCCATTGTCTTATAGCTTaGATAGTTCTCACCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETHCLIA*IVLTRN
Trigger: ATTTCTGGTGAGAACTATGCAAGCTATAAGACAATG...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGTATTATTTTCCTGCTaGCCTCAAACATCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: QMVTISRATDICSRKAQRVLFSC*PQTSFN
Trigger: ATTAAAGGATGTTTGAGGGCAGCAGGAAAATAATAC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATCAGCCTATGCACTATaGGGCACTTGTACTGATAAC +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLSAYAL*GTCTDN
Trigger: GTTATCAGTACAAGTGCCGCATAGTGCATAGGCTGA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAATGCCTAAGAAGCTGTaGCTTCCAGGCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLMPKKL*LPGKSF
Trigger: AAAGCTTTTGCCTGGAAGCCACAGCTTCTTAGGCAT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCAGTGCTTCTTTTCCTaGCCTCAGTGCAAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPQCFFS*PQCKSV
Trigger: TACTGACTTGCACTGAGGCCAGGAAAAGAAGCACTG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAATCATGGAGAGGGAATaGTGTCAACTGAAACCGAGA +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLIMERE*CQLKPR
Trigger: TCTCGGTTTCAGTTGACACCATTCCCTCTCCATGAT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCGGCACAGAAAATAAATaGCACACTCAGAATATTAAC +
Preference number: 4 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETGTENK*HTQNIN
Trigger: GTTAATATTCTGAGTGTGCCATTTATTTTCTGTGCC...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATTCTTTGATGAACCGTaGGCAGTGACTTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLFFDEP*AVTSVK
Trigger: TTTCACAGAAGTCACTGCTCACGGTTCATCAAAGAA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAATTGTGTGCGTTATCTaGTGTCTTTTAAGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLIVCVI*CLLSCD
Trigger: GTCGCAGCTTAAAAGACATCAGATAACGCACACAAT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTAGGTTTTCACCTCAATaGGTCATCCAATATGTAACG +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILRFSPQ*VIQYVT
Trigger: CGTTACATATTGGATGACTCATTGAGGTGAAAACCT...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCATTCCACTCTGGCTGCTaGGAACATAAACTATTCCCA +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSFHSGC*EHKLFP
Trigger: TGGGAATAGTTTATGTTCTCAGCAGCCAGAGTGGAA...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTCTGAGAATTCTACCTaGTGCTCCATGTGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPSENST*CSMCFH
Trigger: GTGGAAACACATGGAGCATCAGGTAGAATTCTCAGA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAACGAATGGTAGCAGATaGTGGGTCAGGGGTATTTTA +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSTNGSR*WVRGIL
Trigger: TAAAATACCCCTGACCCATCATCTGCTACCATTCGT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCATGGATCATTTTCCGCTaGTCTTGGGAAATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSWIIFR*SWEICC
Trigger: ACAGCAGATTTCCCAAGAGCAGCGGAAAATGATCCA...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGGTTTCTCTCCCACATaGATCCTCAAAAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSGFSPT*ILKSVR
Trigger: TCTGACACTTTTGAGGATGCATGTGGGAGAGAAACC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAGACATTTCAGCCTATaGACTATGCGGCACTTGTAC +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPRHFSL*TMRHLY
Trigger: GTACAAGTGCCGCATAGTGCATAGGCTGAAATGTCT...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCGAGTTTTGTTCTTGTTaGCCAGACTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPEFCSC*PDWSAM
Trigger: CATTGCACTCCAGTCTGGGCAACAAGAACAAAACTC...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCATTAGCAGTGAGCCATaGCTCTTCGTTGCTGGATTT +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPISSEP*LFVAGF
Trigger: AAATCCAGCAACGAAGAGCCATGGCTCACTGCTAAT...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTTCTTTGATGAACCGTaGGCAGTGACTTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPFFDEP*AVTSVK
Trigger: TTTCACAGAAGTCACTGCTCACGGTTCATCAAAGAA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCGACACCACCCCCAGTTaGAAAGTTACTTTGGATATA +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPDTTPS*KVTLDI
Trigger: TATATCCAAAGTAACTTTTCAACTGGGGGTGGTGTC...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTACATTGCATCAGGTTTaGGAATTTGAAAACCCAAGA +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILTLHQV*EFENPR
Trigger: TCTTGGGTTTTCAAATTCTCAAACCTGATGCAATGT...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392321.3
CDS-3UTR GCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTTCACCAGAAATATGCTaGCATTCTTTGTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILSPEIC*HSLFMC
Trigger: ACACATGAACAAAGAATGGCAGCATATTTCTGGTGA...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTCATCTTAACAGTGAATaGCTCGATAGCTACATTCTT +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILHLNSE*LDSYIL
Trigger: AAGAATGTAGCTATCGAGGCATTCACTGTTAAGATG...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAGCAAATACCATGGTTTaGGGACGAATCTACACTAGA +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSANTMV*GRIYTR
Trigger: TCTAGTGTAGATTCGTCCCCAAACCATGGTATTTGC...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR TCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAAAGTGTCAGAAAGTATaGCACTTGATAGCAACCTTT +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLKCQKV*HLIATF
Trigger: AAAGGTTGCTATCAAGTGTCATACTTTCTGACACTT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAAGGTTTTCACCTCAATaGGTCATCCAATATGTAACG +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSRFSPQ*VIQYVT
Trigger: CGTTACATATTGGATGACTCATTGAGGTGAAAACCT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTTTAAATTAATATGGTaGTGGAGTGTGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPFKLIW*WSVWRW
Trigger: CCAACGCCACACACTCCATCACCATATTAATTTAAA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATTCTCACCAGAAATATaGTGCCATTCTTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLFSPEI*CHSLFM
Trigger: CATGAACAAAGAATGGCAGCATATTTCTGGTGAGAA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTCATTGTCTTATAGCTTaGATAGTTCTCACCAGAAAT +
Preference number: 4 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILHCLIA*IVLTRN
Trigger: ATTTCTGGTGAGAACTATGCAAGCTATAAGACAATG...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAACAATTTCTGTCATGTaGCTGCTACAAATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLTISVM*LLQIQA
Trigger: AGCTTGAATTTGTAGCAGGCACATGACAGAAATTGT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCATGCCTCATAAGGTGTaGCTTTCTTGTGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPMPHKV*LSCERF
Trigger: AAATCTTTCACAAGAAAGTCACACCTTATGAGGCAT...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCGACTACTCTTCAGTATaGACCTCTGTAGGTATTATT +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPDYSSV*TSVGII
Trigger: AATAATACCTACAGAGGTTCATACTGAAGAGTAGTC...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR TCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAATGCAAATCCAAGTaGAAGGAAAAAGCACTACTG +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPKCKSK*KEKALL
Trigger: CAGTAGTGCTTTTTCCTTTCACTTGGATTTGCATTT...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCATTCTCACCAGAAATATaGTGCCATTCTTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSFSPEI*CHSLFM
Trigger: CATGAACAAAGAATGGCAGCATATTTCTGGTGAGAA...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAATGTTTAATCAGCTGTaGTTTTCTGATGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSMFNQL*FSDEGF
Trigger: GAAGCCTTCATCAGAAAACCACAGCTGATTAAACAT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CAA 72 bp TGTCCTATGTCTAAAAACCATTACCTATTATACGTATaGTATAGCTTCCAGTTGTTTAAGGCAGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CPMSKNHYLLYV*YSFQLFKAGEE
Trigger: TTCCTCTCCTGCCTTAAACAACTGGAAGCTATACAATACGTATAATAGGTAATGGTTTTTAGACATAGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CAA 72 bp AATTATGTTTATTCTACTTCAGGTCATTTGAGCTTCTaGAATATGTGGGGGTATTGTTTTCACCAGATTTGG +
Preference number: 4 (lower is better)
Translates to: NYVYSTSGHLSF*NMWGYCFHQIW
Trigger: CCAAATCTGGTGAAAACAATACCCCCACATATTCAAGAAGCTCAAATGACCTGAAGTAGAATAAACATAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
3UTR CAA 72 bp AAGGAATTTAGAGATAATACTCCATTGTCTTATAGCTaGCATAGTTCTCACCAGAAATATGCTGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: KEFRDNTPLSYS*HSSHQKYAAIL
Trigger: AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGTATTATCTCTAAATTCCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR GCA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAAATTGTGTTCTAAGTTaGAAAGATCCCATAAGGGAA +
Preference number: 4 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSNCVLS*KDPIRE
Trigger: TTCCCTTATGGGATCTTTGCAACTTAGAACACAATT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR GCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTCTTCTTACAGAATCTaGTTCATACAAACGCATTAC +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPSSYRI*FIQTHY
Trigger: GTAATGCGTTTGTATGAAGCAGATTCTGTAAGAAGA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CCA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCGGCACAGAAAATAAATaGCACACTCAGAATATTAAC +
Preference number: 4 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPGTENK*HTQNIN
Trigger: GTTAATATTCTGAGTGTGCCATTTATTTTCTGTGCC...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS CCA 90 bp CGTTTGTCCAGCACTTGCCATCTACACCTGTGGAGCGAGGCCACGTaGCCTAGGAATGGTTGTCGAGCAGCTCTGAAGCTCCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RLSSTCHLHLWSEAT*PRNGCRAALKLPGL
Trigger: CAGCCCTGGGAGCTTCAGAGCTGCTCGACAACCATTCCTAGGCCACGTGGCCTCGCTCCACAGGTGTAGATGGCAAGTGCTGGACAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539809.1
CDS CCA 90 bp AATCCTGCCAAGCAACGTTTGTCCAGCACTTGCCATCTACACCTGTaGAGCGAGGCCACGTGGCCTAGGAATGGTTGTCGAGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: NPAKQRLSSTCHLHL*SEATWPRNGCRAAL
Trigger: CAGAGCTGCTCGACAACCATTCCTAGGCCACGTGGCCTCGCTCCACAGGTGTAGATGGCAAGTGCTGGACAAACGTTGCTTGGCAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539809.1
CDS-3UTR CAA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTAGCGGTCCTCCCAATTaGGCCTCCCCAAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: ALHEFQELFSLLLSSASFSGPPN*ASPSTG
Trigger: CCCAGTGCTTGGGGAGGCCAAATTGGGAGGACCGCT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCAGCTGCGACTTCCTGTaGAAGGTGGTCCCACACTCA +
Preference number: 5 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCSCDFL*KVVPHS
Trigger: TGAGTGTGGGACCACCTTCAACAGGAAGTCGCAGCT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAGCTGGCCTCAAACTCTaGGGCTCAAGCTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTAGLKL*GSSSPL
Trigger: GAGAGGAGAGCTTGAGCCCAAGAGTTTGAGGCCAGC...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCTGGGTTCATGTGATTaGCCCACCTCAGCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: ALHEFQELFSLLLSSASFLGSCD*PTSASR
Trigger: TCGGGAGGCTGAGGTGGGCAAATCACATGAACCCAG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCCACCCAACCAGTGGGTaGGGGAAGCACCCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: ENINYSQPCMSSRNCSACHPTSG*GKHPVV
Trigger: TACTACTGGGTGCTTCCCCAACCCACTGGTTGGGTG...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTCAAAGTGCCACTATGTaGCCCAGGCTGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ALHEFQELFSLLLSSASFQSATM*PRLASN
Trigger: GTTTGAGGCCAGCCTGGGCAACATAGTGGCACTTTG...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGCACCCAACCAGTGGGTaGGGGAAGCACCCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: YIQFLSCACYKFKLPRALHPTSG*GKHPVV
Trigger: TACTACTGGGTGCTTCCCCAACCCACTGGTTGGGTG...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCAGTGGTGGTGCCATCTaGGCTCACTGCAACCTCCAA +
Preference number: 5 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTASGGAI*AHCNLQ
Trigger: TTGGAGGTTGCAGTGAGCCAAGATGGCACCACCACT...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS TCA 90 bp TTGCACTTTACATTTCTTCACTGCCCATGGACCAGGCCACTTAGATaGAGCCAGACACGGAATCAGAGCCAAAGAACTGAAGGACACGCA +
Preference number: 5 (lower is better)
Translates to: LHFTFLHCPWTRPLR*SQTRNQSQRTEGHA
Trigger: TGCGTGTCCTTCAGTTCTTTGGCTCTGATTCCGTGTCTGGCTTCATCTAAGTGGCCTGGTCCATGGGCAGTGAAGAAATGTAAAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360187.9
ENST00000381215.3
ENST00000539809.1
CDS-3UTR CAA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGGTAGTGTGGGGAATCTaGAGACATTTCAGCCTATGC +
Preference number: 5 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQVVWGI*RHFSLC
Trigger: GCATAGGCTGAAATGTCTCAAGATTCCCCACACTAC...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTAGCCATGGCTCTTCGTaGCTGGATTTTCTACATGTA +
Preference number: 5 (lower is better)
Translates to: ALHEFQELFSLLLSSASFSHGSS*LDFLHV
Trigger: TACATGTAGAAAATCCAGCAACGAAGAGCCATGGCT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCCTCCCAGCAGACTTCTaGAGCCCTGTATCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETLPADF*SPVSRR
Trigger: CCTTCTAGATACAGGGCTCAAGAAGTCTGCTGGGAG...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCAGACACCACCCCCAGTaGAAAAGTTACTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCRHHPQ*KSYFGY
Trigger: ATATCCAAAGTAACTTTTCAACTGGGGGTGGTGTCT...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp TTCTCCTCCCACCTCTGGTATCTCCCACTGTTCAAACCTATGAAGAAACCCCAGTCTCAAAGAAAGCTTTaGCACAATCGCTGCATCCAT +
Preference number: 5 (lower is better)
Translates to: FSSHLWYLPLFKPMKKPQSQRKL*HNRCIH
Trigger: ATGGATGCAGCGATTGTGCAAAAGCTTTCTTTGAGA...CTGGGGTTTCTTCATAGGTTTGAACAGTGGGAGATACCAGAGGTGGGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTTCTCAAAGAAAGCTTTaGCACAATCGCTGCATCCAT +
Preference number: 5 (lower is better)
Translates to: ALHEFQELFSLLLSSASFSQRKL*HNRCIH
Trigger: ATGGATGCAGCGATTGTGCAAAAGCTTTCTTTGAGA...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCGAATATGTGGGGGTATaGTTTTCACCAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCEYVGV*FSPDLE
Trigger: TTCCAAATCTGGTGAAAACAATACCCCCACATATTC...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGACACAATGCACATGCCTaGTTCATACCCTCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: QMVTISRATDICSRKAQRHNAHA*FIPSEL
Trigger: CAGCTCTGAGGGTATGAACAAGGCATGTGCATTGTG...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCTCTCGGAGCCACATTTaGGGATTATCTAGCCAGACT +
Preference number: 5 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETSRSHI*GLSSQT
Trigger: AGTCTGGCTAGATAATCCCAAAATGTGGCTCCGAGA...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GAATCTACACTAGACCTGCCTGGCTGCAGTGGTAACACTCCATTGCCTAACTGCGCTCTTTTAATATCCTaGTCTACTAATTCCATCACC +
Preference number: 5 (lower is better)
Translates to: ESTLDLPGCSGNTPLPNCALLIS*STNSIT
Trigger: GGTGATGGAATTAGTAGACAAGGATATTAAAAGAGC...GCAGTTAGGCAATGGAGTGTTACCACTGCAGCCAGGCAGGTCTAGTGTAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp GTTCATACCCTCAGAGCTGCCTGGCAAATACCATGGTTTGGGGACGAATCTACAAGAAGCAACTCTGGCTaGATCTTAGAAAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: VHTLRAAWQIPWFGDESTRSNSG*ILEKLI
Trigger: AATCAGCTTTTCTAAGATCAAGCCAGAGTTGCTTCT...TGTAGATTCGTCCCCAAACCATGGTATTTGCCAGGCAGCTCTGAGGGTATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAAGTGGTAACACTCCATaGCCTAACTGCTCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: QMVTISRATDICSRKAQRSGNTP*PNCSFH
Trigger: GTGAAAGGAGCAGTTAGGCAATGGAGTGTTACCACT...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS CCA 90 bp TGGAGTGGCCTCTGGTCAGTGGTCTGTAAACTGAGAATACATCCTTaGTCTTGTGGGCTCTTCTTTCTTATCTCACATGAATTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: WSGLWSVVCKLRIHP*SCGLFFLISHELSC
Trigger: ACAAGACAATTCATGTGAGATAAGAAAGAAGAGCCCACAAGACCAAGGATGTATTCTCAGTTTACAGACCACTGACCAGAGGCCACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331711.11
ENST00000360187.9
ENST00000381215.3
ENST00000392321.3
ENST00000412621.6
CDS-3UTR CAA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCACTTTTAAGGTTGTCTaGATTATCTCGGAGCCACAT +
Preference number: 5 (lower is better)
Translates to: ENINYSQPCMSSRNCSACTFKVV*IISEPH
Trigger: ATGTGGCTCCGAGATAATCAAGACAACCTTAAAAGT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTCTCCCAGCAGACTTCTaGAGCCCTGTATCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILLPADF*SPVSRR
Trigger: CCTTCTAGATACAGGGCTCAAGAAGTCTGCTGGGAG...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTTCTAGGTTGCAGGGTTaGTTGTTTATTTCATTAAGG +
Preference number: 5 (lower is better)
Translates to: ALHEFQELFSLLLSSASFSRLQG*LFISLR
Trigger: CCTTAATGAAATAAACAACAAACCCTGCAACCTAGA...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCCTTTTTGAAGGTTGTTaGGCTAACCCAGAGGTAGTA +
Preference number: 5 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTALFEGC*ANPEVV
Trigger: TACTACCTCTGGGTTAGCCAAACAACCTTCAAAAAG...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCAGAAGCAACTCTGGCTaGATCTTAGAAAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: ENINYSQPCMSSRNCSACRSNSG*ILEKLI
Trigger: AATCAGCTTTTCTAAGATCAAGCCAGAGTTGCTTCT...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTCTCTGCTGGGCCTCTTaGGCAGTCGACTTCAACTTA +
Preference number: 5 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILLCWAS*AVDFNL
Trigger: TAAGTTGAAGTCGACTGCCAAAGAGGCCCAGCAGAG...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCTGCTTTCCAGTGCTTCTTTTATAGCTACATTCTTTTaGCTGTGCACATTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: ALHEFQELFSLLLSSASFIATFF*LCTFRD
Trigger: ATCTCGAAATGTGCACAGCAAAAAGAATGTAGCTAT...AAAAGAAGCACTGGAAAGCAGCAGGCTGAACAATTCCTGGAACTCATGCAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAAGCTGCGACTTCCTGTaGAAGGTGGTCCCACACTCA +
Preference number: 5 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSSCDFL*KVVPHS
Trigger: TGAGTGTGGGACCACCTTCAACAGGAAGTCGCAGCT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCATTCAGCGAGATTTATaGTTTCCCTTCCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETIQRDL*FPFPEL
Trigger: CAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAAT...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp GAGAACATAAACTATTCCCAGCCCTGCATGAGTTCCAGGAATTGTTCAGCCTGCGCTCTTTTAATATCCTaGTCTACTAATTCCATCACC +
Preference number: 5 (lower is better)
Translates to: ENINYSQPCMSSRNCSACALLIS*STNSIT
Trigger: GGTGATGGAATTAGTAGACAAGGATATTAAAAGAGC...GCAGGCTGAACAATTCCTGGAACTCATGCAGGGCTGGGAATAGTTTATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp CAATTCAGCGAGATTTATTGTTTCCCTTCCCTGAACTGCAACCTAGGAACTGCCTCTACTTCAGGTCATTaGAGCTTCTTGAATATGTGG +
Preference number: 5 (lower is better)
Translates to: QFSEIYCFPSLNCNLGTASTSGH*SFLNMW
Trigger: CCACATATTCAAGAAGCTCAAATGACCTGAAGTAGA...GGCAGTTCCTAGGTTGCAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGTCTACTTCAGGTCATTaGAGCTTCTTGAATATGTGG +
Preference number: 5 (lower is better)
Translates to: YIQFLSCACYKFKLPRALSTSGH*SFLNMW
Trigger: CCACATATTCAAGAAGCTCAAATGACCTGAAGTAGA...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAAGACGGGGTTTCACCTaGTTAGCCAGGATGGTCTCA +
Preference number: 5 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLRRGFT*LARMVS
Trigger: TGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp TACATACAATTTCTGTCATGTGCCTGCTACAAATTCAAGCTACCCCGAGCCCTGTACGTTATCATTACTTaGGCTTTAAGCAGCCAATTC +
Preference number: 5 (lower is better)
Translates to: YIQFLSCACYKFKLPRALYVIIT*ALSSQF
Trigger: GAATTGGCTGCTTAAAGCCAAAGTAATGATAACGTA...CAGGGCTCGGGGTAGCTTGAATTTGTAGCAGGCACATGACAGAAATTGTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTATGAGTCTTGCTATGTaGTCCAGCTGGTCTCAAACG +
Preference number: 5 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILMSLAM*SSWSQT
Trigger: CGTTTGAGACCAGCTGGACAACATAGCAAGACTCAT...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGAGAAACCAGAGTTTATTaGCAAATTGCTCCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: QMVTISRATDICSRKAQRETRVY*QIAPSD
Trigger: ATCACTGGGAGCAATTTGCAAATAAACTCTGGTTTC...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp CCAGTAGTAGTTAAGTCTGAAGATCATGGAGAGGGAATGGTGTCAACTGAAACCTATCCATGGATCTTGTaGTTCCAGTTTGAACATTGC +
Preference number: 5 (lower is better)
Translates to: PVVVKSEDHGEGMVSTETYPWIL*FQFEHC
Trigger: GCAATGTTCAAACTGGAACAACAAGATCCATGGATA...GGTTTCAGTTGACACCATTCCCTCTCCATGATCTTCAGACTTAACTACTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392321.3
CDS-3UTR CAA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATCTCGGAGCCACATTTaGGGATTATCTAGCCAGACT +
Preference number: 5 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLSRSHI*GLSSQT
Trigger: AGTCTGGCTAGATAATCCCAAAATGTGGCTCCGAGA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp CAGATGGTAACAATCTCCAGAGCCACTGACATATGCAGCAGAAAAGCACAAAGATCTAGGTTGCAGGGTTaGTTGTTTATTTCATTAAGG +
Preference number: 5 (lower is better)
Translates to: QMVTISRATDICSRKAQRSRLQG*LFISLR
Trigger: CCTTAATGAAATAAACAACAAACCCTGCAACCTAGA...TCTTTGTGCTTTTCTGCTGCATATGTCAGTGGCTCTGGAGATTGTTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS TCA 90 bp GAGAATACATCCTTGGTCTTGTGGGCTCTTCTTTCTTATCTCACATaGATTGTCTTGTTCCAGAGGGCTATTGCACTTTACATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ENTSLVLWALLSYLT*IVLFQRAIALYISS
Trigger: TGAAGAAATGTAAAGTGCAATAGCCCTCTGGAACAAGACAATTCATGTGAGATAAGAAAGAAGAGCCCACAAGACCAAGGATGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360187.9
ENST00000381215.3
ENST00000539809.1
CDS-3UTR CAA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTACTTTTAAGGTTGTCTaGATTATCTCGGAGCCACAT +
Preference number: 5 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILTFKVV*IISEPH
Trigger: ATGTGGCTCCGAGATAATCAAGACAACCTTAAAAGT...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAATTCAGCGAGATTTATaGTTTCCCTTCCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLIQRDL*FPFPEL
Trigger: CAGTTCAGGGAAGGGAAACAATAAATCTCGCTGAAT...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp ACTCCATTGTCTTATAGCTTGCATAGTTCTCACCAGAAATATGCTGCCATTCTTGAATATGTGGGGGTATaGTTTTCACCAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: TPLSYSLHSSHQKYAAILEYVGV*FSPDLE
Trigger: TTCCAAATCTGGTGAAAACAATACCCCCACATATTC...AAGAATGGCAGCATATTTCTGGTGAGAACTATGCAAGCTATAAGACAATGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCAATGGAGTGTGTGGCGTaGGAAGAAAACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSMECVA*EENLLK
Trigger: CTTCAACAAGTTTTCTTCCAACGCCACACACTCCAT...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTAGAGTTTATTTGCAAATaGCTCCCAGTGATCACACTC +
Preference number: 5 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLEFICK*LPVITL
Trigger: GAGTGTGATCACTGGGAGCAATTTGCAAATAAACTC...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360187.9
CDS-3UTR CAA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCTTTTTGAAGGTTGTTaGGCTAACCCAGAGGTAGTA +
Preference number: 5 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPLFEGC*ANPEVV
Trigger: TACTACCTCTGGGTTAGCCAAACAACCTTCAAAAAG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp ACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCAAACTTATCTTGTTGTTCCAGTTaGAACATTGCATCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: THIFTIFRTSFLCTDPNLSCCSS*NIASGL
Trigger: CAAACCTGATGCAATGTTCAAACTGGAACAACAAGA...TAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392321.3
CDS CCA 90 bp CTGGATTTTCTACATGTACTGCAATCACAGTATTTTATCCCACCATaGGTTCTGCCAGGTTTGATACAGAACAATAATTTCTTATTGAGT +
Preference number: 5 (lower is better)
Translates to: LDFLHVLQSQYFIPP*VLPGLIQNNNFLLS
Trigger: ACTCAATAAGAAATTATTGTTCTGTATCAAACCTGGCAGAACCCATGGTGGGATAAAATACTGTGATTGCAGTACATGTAGAAAATCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331711.11
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp TATTCTCATACACAGGTTATTACAGCACAATTAGGAAGAGACAATCACAACTCACAAGTGTACAGTGAGTaGTCCTTTCTTGAAATCTTC +
Preference number: 5 (lower is better)
Translates to: YSHTQVITAQLGRDNHNSQVYSE*SFLEIF
Trigger: GAAGATTTCAAGAAAGGACAACTCACTGTACACTTG...TGAGTTGTGATTGTCTCTTCCTAATTGTGCTGTAATAACCTGTGTATGAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCCAGAACTTCATTCCTTaGTACAGACCCAAACTTAAG +
Preference number: 5 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPQNFIP*YRPKLK
Trigger: CTTAAGTTTGGGTCTGTACAAAGGAATGAAGTTCTG...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS-3UTR CAA 90 bp TATATTTACCCACATATTCACCATTTTCAGAACTTCATTCCTTTGTACAGACCCTACGTTATCATTACTTaGGCTTTAAGCAGCCAATTC +
Preference number: 5 (lower is better)
Translates to: YIYPHIHHFQNFIPLYRPYVIIT*ALSSQF
Trigger: GAATTGGCTGCTTAAAGCCAAAGTAATGATAACGTA...GGGTCTGTACAAAGGAATGAAGTTCTGAAAATGGTGAATATGTGGGTAAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360187.9
ENST00000392321.3
CDS CCA 72 bp AGCACTTGCCATCTACACCTGTGGAGCGAGGCCACGTaGCCTAGGAATGGTTGTCGAGCAGCTCTGAAGCTC +
Preference number: 6 (lower is better)
Translates to: STCHLHLWSEAT*PRNGCRAALKL
Trigger: GAGCTTCAGAGCTGCTCGACAACCATTCCTAGGCCACGTGGCCTCGCTCCACAGGTGTAGATGGCAAGTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539809.1
CDS CAA 90 bp AGGGACGGAAATTCTACCTCACGTAGCAATCCTGCCAAGCAACGTTaGTCCAGCACTTGCCATCTACACCTGTGGAGCGAGGCCACGTGG +
Preference number: 6 (lower is better)
Translates to: RDGNSTSRSNPAKQR*SSTCHLHLWSEATW
Trigger: CCACGTGGCCTCGCTCCACAGGTGTAGATGGCAAGTGCTGGACAAACGTTGCTTGGCAGGATTGCTACGTGAGGTAGAATTTCCGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539809.1
CDS CCA 72 bp AAGCAACGTTTGTCCAGCACTTGCCATCTACACCTGTaGAGCGAGGCCACGTGGCCTAGGAATGGTTGTCGA +
Preference number: 6 (lower is better)
Translates to: KQRLSSTCHLHL*SEATWPRNGCR
Trigger: TCGACAACCATTCCTAGGCCACGTGGCCTCGCTCCACAGGTGTAGATGGCAAGTGCTGGACAAACGTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539809.1
CDS CAA 72 bp AATTCTACCTCACGTAGCAATCCTGCCAAGCAACGTTaGTCCAGCACTTGCCATCTACACCTGTGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: NSTSRSNPAKQR*SSTCHLHLWSE
Trigger: CTCGCTCCACAGGTGTAGATGGCAAGTGCTGGACAAACGTTGCTTGGCAGGATTGCTACGTGAGGTAGAATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539809.1
CDS TCA 72 bp ACATTTCTTCACTGCCCATGGACCAGGCCACTTAGATaGAGCCAGACACGGAATCAGAGCCAAAGAACTGAA +
Preference number: 6 (lower is better)
Translates to: TFLHCPWTRPLR*SQTRNQSQRTE
Trigger: TTCAGTTCTTTGGCTCTGATTCCGTGTCTGGCTTCATCTAAGTGGCCTGGTCCATGGGCAGTGAAGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360187.9
ENST00000381215.3
ENST00000539809.1
CDS CCA 72 bp GACTCCTGTGTGTGTTATGTGATTAGCAGTGAGCCATaGCTCTTCGTTGCTGGATTTTCTACATGTACTGCA +
Preference number: 6 (lower is better)
Translates to: DSCVCYVISSEP*LFVAGFSTCTA
Trigger: TGCAGTACATGTAGAAAATCCAGCAACGAAGAGCCATGGCTCACTGCTAATCACATAACACACACAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331711.11
ENST00000360187.9
ENST00000392321.3
CDS GCA 72 bp TCCTCAAATGATATCTGTGACTGGATCATTTTCCGCTaGTCTTGGGAAATCTGCTGTTTTGTGACTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SSNDICDWIIFR*SWEICCFVTSL
Trigger: AAGAGAAGTCACAAAACAGCAGATTTCCCAAGAGCAGCGGAAAATGATCCAGTCACAGATATCATTTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331711.11
ENST00000360187.9
ENST00000392321.3
ENST00000412621.6
CDS CAA 90 bp ATACATCCTTGGTCTTGTGGGCTCTTCTTTCTTATCTCACATGAATaGTCTTGTTCCAGAGGGCTATTGCACTTTACATTTCTTCACTGC +
Preference number: 6 (lower is better)
Translates to: IHPWSCGLFFLISHE*SCSRGLLHFTFLHC
Trigger: GCAGTGAAGAAATGTAAAGTGCAATAGCCCTCTGGAACAAGACAATTCATGTGAGATAAGAAAGAAGAGCCCACAAGACCAAGGATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360187.9
ENST00000381215.3
ENST00000539809.1
CDS TCA 72 bp TTGCTTCTCCAGAGTAATTTGTCTGCTTTTTCCTTTTaGCAAGAGGAACCCACGTTAACTATTCCTACTTCC +
Preference number: 6 (lower is better)
Translates to: LLLQSNLSAFSF*QEEPTLTIPTS
Trigger: GGAAGTAGGAATAGTTAACGTGGGTTCCTCTTGTCAAAAGGAAAAAGCAGACAAATTACTCTGGAGAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381215.3