RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF587B (Homo sapiens)

Ensembl gene IDs: ENSG00000269343

Ensembl transcript IDs: ENST00000442832.8, ENST00000594901.2, ENST00000651253.2

Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCCTGCCTCAGCCTCCTaGGTAGCTGCGGCTACAGGT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHPASAS*VAAATG
Trigger: ACCTGTAGCCGCAGCTACTCAGGAGGCTGAGGCAGG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGCACACCAGCATGGGTaGTGGAGTGAGACCGTCTCT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYAHQHG*WSETVS
Trigger: AGAGACGGTCTCACTCCATCACCCATGCTGGTGTGC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACAAGACCACAAAGCCATaGAGTCGTCCACTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYKTTKP*SRPLEA
Trigger: GGCCTCCAGTGGACGACTTCATGGCTTTGTGGTCTT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCATGAAGTCGTCCACTaGAGGCCTTGGGCAGCTATG +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYHEVVH*RPWAAM
Trigger: CATAGCTGCCCAAGGCCTCCAGTGGACGACTTCATG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACTGCAGTGAGCCGAGATaGTGCAACAGCACTCTAGCC +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYCSEPR*CNSTLA
Trigger: GGCTAGAGTGCTGTTGCACCATCTCGGCTCACTGCA...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGTAGTCCCAGCACTTTaGAAGGCGGAGGTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYVVPAL*KAEVSR
Trigger: TCTGCTCACCTCCGCCTTCCAAAGTGCTGGGACTAC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGGTGGTGCATGCCTGTaGACCCAGCTACATGGAGGC +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHGGACL*TQLHGG
Trigger: GCCTCCATGTAGCTGGGTCCACAGGCATGCACCACC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGGAGGCCAAGGCAGGTaGATCACGAGGTTAGGAGTT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYGGQGR*ITRLGV
Trigger: AACTCCTAACCTCGTGATCCACCTGCCTTGGCCTCC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGGACCCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHGPRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACTCCAGCCTGGGTCC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCCATCACAGACACAGTaGCTGGATAACTGTGGACAC +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYPSQTQ*LDNCGH
Trigger: GTGTCCACAGTTATCCAGTCACTGTGTCTGTGATGG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTGCCCAGGCTGGTCTTaGACTCCTTCCTGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHCPGWS*TPSCPC
Trigger: ACAAGGACAGGAAGGAGTTCAAGACCAGCCTGGGCA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACTCAGGAGGCAGAGGTTaGAATGAACCAGGATCACAC +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYSGGRG*NEPGSH
Trigger: GTGTGATCCTGGTTCATTGCAACCTCTGCCTCCTGA...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGGTGAGCAGATCACCTaGGCTCAAGAGTTGAATTCA +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYGEQIT*AQELNS
Trigger: TGAATTCAACTCTTGAGCTCAGGTGATCTGCTCACC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACTTCAAGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYFKQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCTTGAA...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCTGAGGTGTACAGATTaGTTGAGCTCAGGAGTTCGA +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYLRCTD*LSSGVR
Trigger: TCGAACTCCTGAGCTCAAGCAATCTGTACACCTCAG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACATTCATGCTGTCCCTTaGGCCACGCAGTTTAGCTAT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYIHAVP*ATQFSY
Trigger: ATAGCTAAACTGCGTGGCCCAAGGGACAGCATGAAT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCACAGACACAGTGACTaGATAACTGTGGACACTCCT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYHRHSD*ITVDTP
Trigger: AGGAGTGTCCACAGTTATCCAGTCACTGTGTCTGTG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCTCTATCACCCAGGCTaGACTGCAGCGTTGCAATCT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHLYHPG*TAALQS
Trigger: AGATTGCAACGCTGCAGTCCAGCCTGGGTGATAGAG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGTGGACCCAGCTACATaGAGGCTAAGGTGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHVDPAT*RLRWED
Trigger: ATCTTCCCACCTTAGCCTCCATGTAGCTGGGTCCAC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACAAGGTCATTTCTACCTaGTTGAACTGGATCACTGGC +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYKVIST*LNWITG
Trigger: GCCAGTGATCCAGTTCAATCAGGTAGAAATGACCTT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCTGAGAAAGGAGAATTaGTTGAACTCAGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYLRKEN*LNSGGR
Trigger: TCTGCCTCCTGAGTTCAAGCAATTCTCCTTTCTCAG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGTAATTCTAGCTACTTaGGTGACTGAGGTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYVILAT*VTEVGE
Trigger: TTCTCCCACCTCAGTCACCCAAGTAGCTAGAATTAC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCCTGAGCTCAAGAGTTaGATTCAAGACCAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHPELKS*IQDQSV
Trigger: CACAGACTGGTCTTGAATTCAACTCTTGAGCTCAGG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGGAGTTACCTTAAGGTaGGCAGCCCAAAAGGTTACA +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHGVTLR*AAQKVT
Trigger: TGTAACCTTTTGGGCTGCTCACCTTAAGGTAACTCC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTTCAAGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHFKQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCTTGAA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACAGTGGTGTGGTGGCATaGACCTGTAATTCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHSGVVA*TCNSSY
Trigger: GTAGCTAGAATTACAGGTGCATGCCACCACACCACT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCTAGAGACAAGGTTTTaGCATGTTCCCCACACTGGT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHLETRF*HVPHTG
Trigger: ACCAGTGTGGGGAACATGGCAAAACCTTGTCTCTAG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCACAGACACAGTGACTaGATAACTGTGGACACTCCT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHHRHSD*ITVDTP
Trigger: AGGAGTGTCCACAGTTATCCAGTCACTGTGTCTGTG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACATTGAACTGGATCACTaGCTGGTCACAAAGCTACAT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYIELDH*LVTKLH
Trigger: ATGTAGCTTTGTGACCAGCCAGTGATCCAGTTCAAT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACACAATCTCAGCACTTTaGGAGGCTGAGGTGTACAGA +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHTISAL*EAEVYR
Trigger: TCTGTACACCTCAGCCTCCCAAAGTGCTGAGATTGT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTTCAATTTGGGCACATaGTGCCCTCAAAGGATCTCC +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHFNLGT*CPQRIS
Trigger: GGAGATCCTTTGAGGGCACCATGTGCCCAAATTGAA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGCTACATCACTGAACTaGGATCTTTTTCCCTATTCT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYATSLN*DLFPYS
Trigger: AGAATAGGGAAAAAGATCTCAGTTCAGTGATGTAGC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACACAAAGCTACATCACTaGACTGAGATCTTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYTKLHH*TEIFFP
Trigger: AGGGAAAAAGATCTCAGTTCAGTGATGTAGCTTTGT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACAAGGTCATTTCTACCTaGTTGAACTGGATCACTGGC +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHKVIST*LNWITG
Trigger: GCCAGTGATCCAGTTCAATCAGGTAGAAATGACCTT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACAAAACATTAGTGGTGTaGTGGCATGCACCTGTAATT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYKTLVV*WHAPVI
Trigger: AATTACAGGTGCATGCCACCACACCACTAATGTTTT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACAACTGGATCACTGGCTaGTCACAAAGCTACATCACT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHNWITG*SQSYIT
Trigger: AGTGATGTAGCTTTGTGACCAGCCAGTGATCCAGTT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCATAGAAGCAAATATTaGTGTAGCAGGAAGGTCATT +
Preference number: 2 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYHRSKY*CSRKVI
Trigger: AATGACCTTCCTGCTACATCAATATTTGCTTCTATG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACATCATGGCACATGTGTaGCTTGTAAGATCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHIMAHV*LVRSAE
Trigger: TTCAGCAGATCTTACAAGGCACACATGTGCCATGAT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACACATTAGTGGTGTGGTaGCATGCACCTGTAATTCTA +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHTLVVW*HAPVIL
Trigger: TAGAATTACAGGTGCATGCCACCACACCACTAATGT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACATTGAACTGGATCACTaGCTGGTCACAAAGCTACAT +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHIELDH*LVTKLH
Trigger: ATGTAGCTTTGTGACCAGCCAGTGATCCAGTTCAAT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCAAATAGGCCACAAGTaGAGAAAGCTATATTCTGCA +
Preference number: 2 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHQIGHK*RKLYSA
Trigger: TGCAGAATATAGCTTTCTTCACTTGTGGCCTATTTG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCCAGAAGGCACAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDPEGTG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTGTGCCTTCTGG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAGGCACAGGTTGCAGTaGGCCGAGATGGTGCAACAG +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYRHRLQ*AEMVQQ
Trigger: CTGTTGCACCATCTCGGCTCACTGCAACCTGTGCCT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATGGTGGGAGAATCGCTTaGACCCAGAAGGCACAGGTT +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDGGRIA*TQKAQV
Trigger: AACCTGTGCCTTCTGGGTTCAAGCGATTCTCCCACC...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGGACCCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYGPRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACTCCAGCCTGGGTCC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCCAGAAGGCACAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYPEGTG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTGTGCCTTCTGG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCATGAAGTCGTCCACTaGAGGCCTTGGGCAGCTATG +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDHEVVH*RPWAAM
Trigger: CATAGCTGCCCAAGGCCTCCAGTGGACGACTTCATG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGGTGGGAGAATCGCTTaGACCCAGAAGGCACAGGTT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYGGRIA*TQKAQV
Trigger: AACCTGTGCCTTCTGGGTTCAAGCGATTCTCCCACC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAGGCATGGTGGTGCATaGCTGTGGACCCAGCTACAT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYRHGGA*LWTQLH
Trigger: ATGTAGCTGGGTCCACAGGCATGCACCACCATGCCT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGTAGTCCCAGCACTTTaGAAGGCGGAGGTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYVVPAL*KAEVSR
Trigger: TCTGCTCACCTCCGCCTTCCAAAGTGCTGGGACTAC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTGGTCTCAAGGAATCTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDWSQGI*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACTCGAGACCAGCAGTTTaGGACCAGACTGTGCAACAC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYSRPAV*DQTVQH
Trigger: GTGTTGCACAGTCTGGTCTCAAACTGCTGGTCTCGA...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACTGGTCTCAAGGAATCTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYWSQGI*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCA...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCCATGTTCCCCACACTaGTCTCAAGGAATCTGGCCT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYPCSPH*SQGIWP
Trigger: AGGCCAGATTCCTTGAGACCAGTGTGGGGAACATGG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCTCTATCACCCAGGCTaGACTGCAGCGTTGCAATCT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYLYHPG*TAALQS
Trigger: AGATTGCAACGCTGCAGTCCAGCCTGGGTGATAGAG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATGGTGAGCAGATCACCTaGGCTCAAGAGTTGAATTCA +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDGEQIT*AQELNS
Trigger: TGAATTCAACTCTTGAGCTCAGGTGATCTGCTCACC...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCCATCACAGACACAGTaGCTGGATAACTGTGGACAC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYPSQTQ*LDNCGH
Trigger: GTGTCCACAGTTATCCAGTCACTGTGTCTGTGATGG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATGGAGTTACCTTAAGGTaGGCAGCCCAAAAGGTTACA +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDGVTLR*AAQKVT
Trigger: TGTAACCTTTTGGGCTGCTCACCTTAAGGTAACTCC...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGCTGGACTGCAGCGTTaGAATCTTAGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYAGLQR*NLSSLQ
Trigger: TTGCAGTGAGCTAAGATTGCAACGCTGCAGTCCAGC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAATTTGGGCACATGGTaGCCTCAAAGGATCTCCTCC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYNLGTW*PQRISS
Trigger: GGAGGAGATCCTTTGAGGGCACCATGTGCCCAAATT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATATTCATGCTGTCCCTTaGGCCACGCAGTTTAGCTAT +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDIHAVP*ATQFSY
Trigger: ATAGCTAAACTGCGTGGCCCAAGGGACAGCATGAAT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAGTACAAAAATTACCTaGGTGTGGTGGCAGGCACCT +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDSTKIT*VWWQAP
Trigger: AGGTGCCTGCCACCACACCCAGGTAATTTTTGTACT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAGCACAAGAGTCCTCTaGGACAAAAATGGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDSTRVL*DKNGEG
Trigger: ACCTTCCCCATTTTTGTCCCAGAGGACTCTTGTGCT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCCTGAGCTCAAGAGTTaGATTCAAGACCAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYPELKS*IQDQSV
Trigger: CACAGACTGGTCTTGAATTCAACTCTTGAGCTCAGG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTCATTTCTACCTGATTaGACTGGATCACTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDSFLPD*TGSLAG
Trigger: ACCAGCCAGTGATCCAGTTCAATCAGGTAGAAATGA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAGTGGTGTGGTGGCATaGACCTGTAATTCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYSGVVA*TCNSSY
Trigger: GTAGCTAGAATTACAGGTGCATGCCACCACACCACT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATGTAATTCTAGCTACTTaGGTGACTGAGGTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDVILAT*VTEVGE
Trigger: TTCTCCCACCTCAGTCACCCAAGTAGCTAGAATTAC...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAACTGGATCACTGGCTaGTCACAAAGCTACATCACT +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDNWITG*SQSYIT
Trigger: AGTGATGTAGCTTTGTGACCAGCCAGTGATCCAGTT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACTCATTTCTACCTGATTaGACTGGATCACTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYSFLPD*TGSLAG
Trigger: ACCAGCCAGTGATCCAGTTCAATCAGGTAGAAATGA...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAGGCATGAGCCACCATaGTTAGCCAAAATAGTCCAT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYRHEPP*LAKIVH
Trigger: ATGGACTATTTTGGCTAAGCATGGTGGCTCATGCCT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAGTTCGATACCAGCCTaGAAACATGGTAAAACCCTA +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDSSIPA*KHGKTL
Trigger: TAGGGTTTTACCATGTTTCCAGGCTGGTATCGAACT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACATAATCCCAACATTCTaGGAAGCCAGGCAGAAGGAT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYIIPTF*EARQKD
Trigger: ATCCTTCTGCCTGGCTTCCCAGAATGTTGGGATTAT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCAAATAGGCCACAAGTaGAGAAAGCTATATTCTGCA +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDQIGHK*RKLYSA
Trigger: TGCAGAATATAGCTTTCTTCACTTGTGGCCTATTTG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACTACGAAATAGGTGAATaGTGCAATGTGGGTACCTAC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYYEIGE*CNVGTY
Trigger: GTAGGTACCCACATTGCATCATTCACCTATTTCGTA...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCAGTACCGAGCACAGTaGAATATACCTCATAAGAGA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYQYRAQ*NIPHKR
Trigger: TCTCTTATGAGGTATATTGCACTGTGCTCGGTACTG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACATCATGGCACATGTGTaGCTTGTAAGATCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYIMAHV*LVRSAE
Trigger: TTCAGCAGATCTTACAAGGCACACATGTGCCATGAT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAGATGTAATGGCTTTTaGCAGATAAGTGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYRCNGF*QISGSH
Trigger: GTGACTGCCACTTATCTGGCAAAAGCCATTACATCT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACACATTAGTGGTGTGGTaGCATGCACCTGTAATTCTA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYTLVVW*HAPVIL
Trigger: TAGAATTACAGGTGCATGCCACCACACCACTAATGT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTTAGATTATTTCCTCTaGCCAAAGCTTAGCTACACA +
Preference number: 2 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDLDYFL*PKLSYT
Trigger: TGTGTAGCTAAGCTTTGGTCAGAGGAAATAATCTAA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGCTACATCACTGAACTaGGATCTTTTTCCCTATTCT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYATSLN*DLFPYS
Trigger: AGAATAGGGAAAAAGATCTCAGTTCAGTGATGTAGC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAGAATACGAAATAGGTaGATGATGCAATGTGGGTAC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYRIRNR*MMQCGY
Trigger: GTACCCACATTGCATCATTCACCTATTTCGTATTCT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAAGAAAGCTATATTCTaGATTCATGCTGTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYKKAIF*IHAVPW
Trigger: CCAAGGGACAGCATGAATGCAGAATATAGCTTTCTT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACTTAGATTATTTCCTCTaGCCAAAGCTTAGCTACACA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYLDYFL*PKLSYT
Trigger: TGTGTAGCTAAGCTTTGGTCAGAGGAAATAATCTAA...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCATAGAAGCAAATATTaGTGTAGCAGGAAGGTCATT +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYHRSKY*CSRKVI
Trigger: AATGACCTTCCTGCTACATCAATATTTGCTTCTATG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACACAGAAAAACATAATTaGCTGAGCACAGTGACTCAA +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYTEKHN*LSTVTQ
Trigger: TTGAGTCACTGTGCTCAGCCAATTATGTTTTTCTGT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAAAATCTCTCGTGAATaGGAGACAACCAAAATATAC +
Preference number: 2 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYKISRE*ETTKIY
Trigger: GTATATTTTGGTTGTCTCCCATTCACGAGAGATTTT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR TCA 72 bp GGAAGATCACTTGAGCCTAGGGGGCGGAGGATGCAGTaGGCTACGATCGCAGCACTGCACACCAGCATGGGT +
Preference number: 3 (lower is better)
Translates to: GRSLEPRGRRMQ*ATIAALHTSMG
Trigger: ACCCATGCTGGTGTGCAGTGCTGCGATCGTAGCTCACTGCATCCTCCGCCCCCTAGGCTCAAGTGATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594901.2
ENST00000651253.2
3UTR GCA 72 bp AGGTGGGAAGATCACTTGAGCCTAGGGGGCGGAGGATaGAGTGAGCTACGATCGCAGCACTGCACACCAGCA +
Preference number: 3 (lower is better)
Translates to: RWEDHLSLGGGG*SELRSQHCTPA
Trigger: TGCTGGTGTGCAGTGCTGCGATCGTAGCTCACTGCATCCTCCGCCCCCTAGGCTCAAGTGATCTTCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594901.2
ENST00000651253.2
3UTR-3UTR CAA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCGTCCACTGGAGGCCTaGGGCAGCTATGCAAATAGG +
Preference number: 3 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYRPLEA*GSYANR
Trigger: CCTATTTGCATAGCTGCCCAAGGCCTCCAGTGGACG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CAA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGCTGAGGTGTACAGATaGCTTGAGCTCAGGAGTTCG +
Preference number: 3 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYAEVYR*LELRSS
Trigger: CGAACTCCTGAGCTCAAGCAATCTGTACACCTCAGC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CAA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGCTGAGAAAGGAGAATaGCTTGAACTCAGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHAEKGE*LELRRQ
Trigger: CTGCCTCCTGAGTTCAAGCAATTCTCCTTTCTCAGC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CAA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACAGAAAGGAGAATTGCTaGAACTCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHRKENC*NSGGRG
Trigger: ACCTCTGCCTCCTGAGTTCAAGCAATTCTCCTTTCT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CAA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTGTAGTCCCAGCACTTaGGAAGGCGGAGGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDCSPST*EGGGEQ
Trigger: CTGCTCACCTCCGCCTTCCAAAGTGCTGGGACTACA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR-3UTR CAA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCTCGAGACCAGCAGTTaGAGACCAGACTGTGCAACA +
Preference number: 3 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDLETSS*RPDCAT
Trigger: TGTTGCACAGTCTGGTCTCAAACTGCTGGTCTCGAG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CAA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAGGTGTACAGATTGCTaGAGCTCAGGAGTTCGATAC +
Preference number: 3 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDRCTDC*SSGVRY
Trigger: GTATCGAACTCCTGAGCTCAAGCAATCTGTACACCT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CAA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATGATTTGCCATCATTTTaGGTGACAGGTTTGGCAATT +
Preference number: 3 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDDLPSF*VTGLAI
Trigger: AATTGCCAAACCTGTCACCAAAAATGATGGCAAATC...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
3UTR TCA 72 bp AACCAAAATATACTTCTAGAATACGAAATAGGTGAATaGTGCAATGTGGGTACCTACCAAGTAGCTGAGATG +
Preference number: 3 (lower is better)
Translates to: NQNILLEYEIGE*CNVGTYQVAEM
Trigger: CATCTCAGCTACTTGGTAGGTACCCACATTGCATCATTCACCTATTTCGTATTCTAGAAGTATATTTTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
3UTR-3UTR CAA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGATTTGCCATCATTTTaGGTGACAGGTTTGGCAATT +
Preference number: 3 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYDLPSF*VTGLAI
Trigger: AATTGCCAAACCTGTCACCAAAAATGATGGCAAATC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGGTGGTGCATGCCTGTaGACCCAGCTACATGGAGGC +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYGGACL*TQLHGG
Trigger: GCCTCCATGTAGCTGGGTCCACAGGCATGCACCACC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGGACCCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYGPRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACTCCAGCCTGGGTCC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCCAGAAGGCACAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYPEGTG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTGTGCCTTCTGG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACTGCCCAGGCTGGTCTTaGACTCCTTCCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYCPGWS*TPSCPC
Trigger: ACAAGGACAGGAAGGAGTTCAAGACCAGCCTGGGCA...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGGTGGGAGAATCGCTTaGACCCAGAAGGCACAGGTT +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYGGRIA*TQKAQV
Trigger: AACCTGTGCCTTCTGGGTTCAAGCGATTCTCCCACC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGGTTTAAAGCAGGGTTaGGAGGAGAGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYGLKQG*EERVTS
Trigger: GCTGGTCACCCTCTCCTCCCAACCCTGCTTTAAACC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGGTGGGAGAATCGCTTaGACCCAGAAGGCACAGGTT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHGGRIA*TQKAQV
Trigger: AACCTGTGCCTTCTGGGTTCAAGCGATTCTCCCACC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCTTCAAAAGTCACTGTaGCCTGAGCAGAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYLQKSL*PEQRAS
Trigger: TGAGGCTCTCTGCTCAGGGCACAGTGACTTTTGAAG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACGCTGGACTGCAGCGTTaGAATCTTAGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYAGLQR*NLSSLQ
Trigger: TTGCAGTGAGCTAAGATTGCAACGCTGCAGTCCAGC...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCATGAAGTCGTCCACTaGAGGCCTTGGGCAGCTATG +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHHEVVH*RPWAAM
Trigger: CATAGCTGCCCAAGGCCTCCAGTGGACGACTTCATG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGTAGTCCCAGCACTTTaGAAGGCGGAGGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHVVPAL*KAEVSR
Trigger: TCTGCTCACCTCCGCCTTCCAAAGTGCTGGGACTAC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCCTGAGCTCAAGAGTTaGATTCAAGACCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYPELKS*IQDQSV
Trigger: CACAGACTGGTCTTGAATTCAACTCTTGAGCTCAGG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTCGAGACCAGCAGTTTaGGACCAGACTGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHSRPAV*DQTVQH
Trigger: GTGTTGCACAGTCTGGTCTCAAACTGCTGGTCTCGA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACAGTGGTGTGGTGGCATaGACCTGTAATTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYSGVVA*TCNSSY
Trigger: GTAGCTAGAATTACAGGTGCATGCCACCACACCACT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCCATGTTCCCCACACTaGTCTCAAGGAATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHPCSPH*SQGIWP
Trigger: AGGCCAGATTCCTTGAGACCAGTGTGGGGAACATGG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACACAATCTCAGCACTTTaGGAGGCTGAGGTGTACAGA +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYTISAL*EAEVYR
Trigger: TCTGTACACCTCAGCCTCCCAAAGTGCTGAGATTGT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCCATCACAGACACAGTaGCTGGATAACTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHPSQTQ*LDNCGH
Trigger: GTGTCCACAGTTATCCAGTCACTGTGTCTGTGATGG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACTCATTTCTACCTGATTaGACTGGATCACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYSFLPD*TGSLAG
Trigger: ACCAGCCAGTGATCCAGTTCAATCAGGTAGAAATGA...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACCAGTACCGAGCACAGTaGAATATACCTCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYQYRAQ*NIPHKR
Trigger: TCTCTTATGAGGTATATTGCACTGTGCTCGGTACTG...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACACATTAGTGGTGTGGTaGCATGCACCTGTAATTCTA +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYTLVVW*HAPVIL
Trigger: TAGAATTACAGGTGCATGCCACCACACCACTAATGT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACAGTTCGATACCAGCCTaGAAACATGGTAAAACCCTA +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYSSIPA*KHGKTL
Trigger: TAGGGTTTTACCATGTTTCCAGGCTGGTATCGAACT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACAGTACAAAAATTACCTaGGTGTGGTGGCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHSTKIT*VWWQAP
Trigger: AGGTGCCTGCCACCACACCCAGGTAATTTTTGTACT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTCATTTCTACCTGATTaGACTGGATCACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHSFLPD*TGSLAG
Trigger: ACCAGCCAGTGATCCAGTTCAATCAGGTAGAAATGA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACAGAATACGAAATAGGTaGATGATGCAATGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYRIRNR*MMQCGY
Trigger: GTACCCACATTGCATCATTCACCTATTTCGTATTCT...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCCTGCCTCAGCCTCCTaGGTAGCTGCGGCTACAGGT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYPASAS*VAAATG
Trigger: ACCTGTAGCCGCAGCTACTCAGGAGGCTGAGGCAGG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACTTAGATTATTTCCTCTaGCCAAAGCTTAGCTACACA +
Preference number: 4 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYLDYFL*PKLSYT
Trigger: TGTGTAGCTAAGCTTTGGTCAGAGGAAATAATCTAA...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTACGAAATAGGTGAATaGTGCAATGTGGGTACCTAC +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHYEIGE*CNVGTY
Trigger: GTAGGTACCCACATTGCATCATTCACCTATTTCGTA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCAGTACCGAGCACAGTaGAATATACCTCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHQYRAQ*NIPHKR
Trigger: TCTCTTATGAGGTATATTGCACTGTGCTCGGTACTG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACAGATGTAATGGCTTTTaGCAGATAAGTGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHRCNGF*QISGSH
Trigger: GTGACTGCCACTTATCTGGCAAAAGCCATTACATCT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGCTACATCACTGAACTaGGATCTTTTTCCCTATTCT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHATSLN*DLFPYS
Trigger: AGAATAGGGAAAAAGATCTCAGTTCAGTGATGTAGC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACACAAAGCTACATCACTaGACTGAGATCTTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHTKLHH*TEIFFP
Trigger: AGGGAAAAAGATCTCAGTTCAGTGATGTAGCTTTGT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACAAAACATTAGTGGTGTaGTGGCATGCACCTGTAATT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHKTLVV*WHAPVI
Trigger: AATTACAGGTGCATGCCACCACACCACTAATGTTTT...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAAGACCACAAAGCCATaGAGTCGTCCACTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDKTTKP*SRPLEA
Trigger: GGCCTCCAGTGGACGACTTCATGGCTTTGTGGTCTT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTTAGATTATTTCCTCTaGCCAAAGCTTAGCTACACA +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHLDYFL*PKLSYT
Trigger: TGTGTAGCTAAGCTTTGGTCAGAGGAAATAATCTAA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCATAGAAGCAAATATTaGTGTAGCAGGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHHRSKY*CSRKVI
Trigger: AATGACCTTCCTGCTACATCAATATTTGCTTCTATG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACCTGATGGTAACGAAGTaGAGAGCTTTTCCTAAATTT +
Preference number: 4 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHLMVTK*RAFPKF
Trigger: AAATTTAGGAAAAGCTCTTCACTTCGTTACCATCAG...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATGGTTTAAAGCAGGGTTaGGAGGAGAGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDGLKQG*EERVTS
Trigger: GCTGGTCACCCTCTCCTCCCAACCCTGCTTTAAACC...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTGCAGTGAGCCGAGATaGTGCAACAGCACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDCSEPR*CNSTLA
Trigger: GGCTAGAGTGCTGTTGCACCATCTCGGCTCACTGCA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACTGCCCAGGCTGGTCTTaGACTCCTTCCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYCPGWS*TPSCPC
Trigger: ACAAGGACAGGAAGGAGTTCAAGACCAGCCTGGGCA...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCTCTATCACCCAGGCTaGACTGCAGCGTTGCAATCT +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDLYHPG*TAALQS
Trigger: AGATTGCAACGCTGCAGTCCAGCCTGGGTGATAGAG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGGAGGCCAAGGCAGGTaGATCACGAGGTTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYGGQGR*ITRLGV
Trigger: AACTCCTAACCTCGTGATCCACCTGCCTTGGCCTCC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR GCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATGCTGGACTGCAGCGTTaGAATCTTAGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDAGLQR*NLSSLQ
Trigger: TTGCAGTGAGCTAAGATTGCAACGCTGCAGTCCAGC...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTCAGGAGGCAGAGGTTaGAATGAACCAGGATCACAC +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDSGGRG*NEPGSH
Trigger: GTGTGATCCTGGTTCATTGCAACCTCTGCCTCCTGA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGTGGACCCAGCTACATaGAGGCTAAGGTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYVDPAT*RLRWED
Trigger: ATCTTCCCACCTTAGCCTCCATGTAGCTGGGTCCAC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR GCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTTCAAGCAATTTTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDFKQFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAAAATTGCTTGAA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCTGAGGTGTACAGATTaGTTGAGCTCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDLRCTD*LSSGVR
Trigger: TCGAACTCCTGAGCTCAAGCAATCTGTACACCTCAG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCACAGACACAGTGACTaGATAACTGTGGACACTCCT +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDHRHSD*ITVDTP
Trigger: AGGAGTGTCCACAGTTATCCAGTCACTGTGTCTGTG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGGTGAGCAGATCACCTaGGCTCAAGAGTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYGEQIT*AQELNS
Trigger: TGAATTCAACTCTTGAGCTCAGGTGATCTGCTCACC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACCTAGAGACAAGGTTTTaGCATGTTCCCCACACTGGT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYLETRF*HVPHTG
Trigger: ACCAGTGTGGGGAACATGGCAAAACCTTGTCTCTAG...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR GCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAGGCATGAGCCACCATaGTTAGCCAAAATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDRHEPP*LAKIVH
Trigger: ATGGACTATTTTGGCTAAGCATGGTGGCTCATGCCT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAACTGGATCACTGGCTaGTCACAAAGCTACATCACT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYNWITG*SQSYIT
Trigger: AGTGATGTAGCTTTGTGACCAGCCAGTGATCCAGTT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATATTGAACTGGATCACTaGCTGGTCACAAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDIELDH*LVTKLH
Trigger: ATGTAGCTTTGTGACCAGCCAGTGATCCAGTTCAAT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATACAAAGCTACATCACTaGACTGAGATCTTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDTKLHH*TEIFFP
Trigger: AGGGAAAAAGATCTCAGTTCAGTGATGTAGCTTTGT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACATTGAACTGGATCACTaGCTGGTCACAAAGCTACAT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYIELDH*LVTKLH
Trigger: ATGTAGCTTTGTGACCAGCCAGTGATCCAGTTCAAT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR TCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCATAGAAGCAAATATTaGTGTAGCAGGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDHRSKY*CSRKVI
Trigger: AATGACCTTCCTGCTACATCAATATTTGCTTCTATG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAAAACATTAGTGGTGTaGTGGCATGCACCTGTAATT +
Preference number: 4 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYKTLVV*WHAPVI
Trigger: AATTACAGGTGCATGCCACCACACCACTAATGTTTT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CCA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATAAAATCTCTCGTGAATaGGAGACAACCAAAATATAC +
Preference number: 4 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDKISRE*ETTKIY
Trigger: GTATATTTTGGTTGTCTCCCATTCACGAGAGATTTT...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR CAA 90 bp CATGTTCCCCACACTGGTCTCAAGGAATCTGGCCTCCCAAAGTGCTGGGAATACTGTAGTCCCAGCACTTaGGAAGGCGGAGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: HVPHTGLKESGLPKCWEYCSPST*EGGGEQ
Trigger: CTGCTCACCTCCGCCTTCCAAAGTGCTGGGACTACA...GTATTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGTGGGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTGTAGTCCCAGCACTTaGGAAGGCGGAGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHCSPST*EGGGEQ
Trigger: CTGCTCACCTCCGCCTTCCAAAGTGCTGGGACTACA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTGGTTTAAAGCAGGGTaGGGAGGAGAGGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHWFKAG*GGEGDQ
Trigger: CTGGTCACCCTCTCCTCCCAACCCTGCTTTAAACCA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACTCCAGCGTGAACTTTTaGATGGCGCCTAAGATATCC +
Preference number: 5 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHSSVNF*MAPKIS
Trigger: GGATATCTTAGGCGCCATCAAAAAGTTCACGCTGGA...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATCGTCCACTGGAGGCCTaGGGCAGCTATGCAAATAGG +
Preference number: 5 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDRPLEA*GSYANR
Trigger: CCTATTTGCATAGCTGCCCAAGGCCTCCAGTGGACG...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp CATGTGTGCCTTGTAAGATCTGCTGAACAGAGTTCCCTCAACAGTACCGAGCACGATTTGCCATCATTTTaGGTGACAGGTTTGGCAATT +
Preference number: 5 (lower is better)
Translates to: HVCLVRSAEQSSLNSTEHDLPSF*VTGLAI
Trigger: AATTGCCAAACCTGTCACCAAAAATGATGGCAAATC...GTGCTCGGTACTGTTGAGGGAACTCTGTTCAGCAGATCTTACAAGGCACACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACTGGTTTAAAGCAGGGTaGGGAGGAGAGGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYWFKAG*GGEGDQ
Trigger: CTGGTCACCCTCTCCTCCCAACCCTGCTTTAAACCA...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp GGTGATAGATTAGATAAATTCATTATGGTGACTCTGATGATGGTTTCACGGGATTCCAGCGTGAACTTTTaGATGGCGCCTAAGATATCC +
Preference number: 5 (lower is better)
Translates to: GDRLDKFIMVTLMMVSRDSSVNF*MAPKIS
Trigger: GGATATCTTAGGCGCCATCAAAAAGTTCACGCTGGA...ATCCCGTGAAACCATCATCAGAGTCACCATAATGAATTTATCTAATCTATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442832.8
ENST00000594901.2
CDS-3UTR CAA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACGCTGAGAAAGGAGAATaGCTTGAACTCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYAEKGE*LELRRQ
Trigger: CTGCCTCCTGAGTTCAAGCAATTCTCCTTTCTCAGC...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2
CDS-3UTR CAA 90 bp GTGACTCTGATGATGGTTTCACGGGATTATAATAAAATTCAAGACTTATCCTACAGGTGTACAGATTGCTaGAGCTCAGGAGTTCGATAC +
Preference number: 5 (lower is better)
Translates to: VTLMMVSRDYNKIQDLSYRCTDC*SSGVRY
Trigger: GTATCGAACTCCTGAGCTCAAGCAATCTGTACACCT...GTAGGATAAGTCTTGAATTTTATTATAATCCCGTGAAACCATCATCAGAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594901.2