RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF449 (Homo sapiens)

Ensembl gene IDs: ENSG00000173275

Ensembl transcript IDs: ENST00000339249.5, ENST00000370761.7

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCTGAAGCTAACAGCTCCTGCAGAGAACCCCCATAGACAAGACTaGAGTATCCCTGATGCCCATCTGGAAGCTCCTGCTCCCTTTTCC +
Preference number: 1 (lower is better)
Translates to: ALKLTAPAENPHRQD*SIPDAHLEAPAPFS
Trigger: GGAAAAGGGAGCAGGAGCTTCCAGATGGGCATCAGGGATACTCCAGTCTTGTCTATGGGGGTTCTCTGCAGGAGCTGTTAGCTTCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CCA 90 bp CAGAGAACCCCCATAGACAAGACTGGAGTATCCCTGATGCCCATCTaGAAGCTCCTGCTCCCTTTTCCCAAAGATACTGCCCTCTCTCAG +
Preference number: 1 (lower is better)
Translates to: QRTPIDKTGVSLMPI*KLLLPFPKDTALSQ
Trigger: CTGAGAGAGGGCAGTATCTTTGGGAAAAGGGAGCAGGAGCTTCCAGATGGGCATCAGGGATACTCCAGTCTTGTCTATGGGGGTTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR GCA 90 bp CCTGATGCCCATCTGGAAGCTCCTGCTCCCTTTTCCCAAAGATACTaGCCTCTCTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAG +
Preference number: 1 (lower is better)
Translates to: PDAHLEAPAPFSQRY*PLSVTALLKRGFTQ
Trigger: CTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTTTGGGAAAAGGGAGCAGGAGCTTCCAGATGGGCATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR TCA 90 bp CTCCCTTTTCCCAAAGATACTGCCCTCTCTCAGTCACGGCACTTCTaGAAAGAGGCTTTACACAGTCATTCTGAATGGCAGACAGTGCCA +
Preference number: 1 (lower is better)
Translates to: LPFPKDTALSQSRHF*KEALHSHSEWQTVP
Trigger: TGGCACTGTCTGCCATTCAGAATGACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTTTGGGAAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CCA 90 bp GCTTTACACAGTCATTCTGAATGGCAGACAGTGCCACTGTCCCCATaGGGAGTTTTGGATATGCTGACAGGTGGTGGCTATCAGAATTTA +
Preference number: 1 (lower is better)
Translates to: ALHSHSEWQTVPLSP*GVLDMLTGGGYQNL
Trigger: TAAATTCTGATAGCCACCACCTGTCAGCATATCCAAAACTCCCCATGGGGACAGTGGCACTGTCTGCCATTCAGAATGACTGTGTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR TCA 90 bp TCTAGGTCCCTACCAAGTGTGGAATGTCCCACTCAAACATTCATGTaGGTAAAAAGAACCTGTCAAGAACCCCACCTTGTTGGTCAAATA +
Preference number: 1 (lower is better)
Translates to: SRSLPSVECPTQTFM*VKRTCQEPHLVGQI
Trigger: TATTTGACCAACAAGGTGGGGTTCTTGACAGGTTCTTTTTACTCACATGAATGTTTGAGTGGGACATTCCACACTTGGTAGGGACCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR TCA 90 bp TCTCAATTTGTATTGGCCATATTTCAAGGGCTCAAGAGCTGTACATaGCTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATG +
Preference number: 1 (lower is better)
Translates to: SQFVLAIFQGLKSCT*LVVTVFSSKCLDHM
Trigger: CATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAGCTCTTGAGCCCTTGAAATATGGCCAATACAAATTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR TCA 90 bp AGAATTGGCCTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTTaGTGTATGTGGGTAGATTATGTTGTCTATCAATTTCATTTGTGC +
Preference number: 1 (lower is better)
Translates to: RIGLQAMEQFTDALG*CMWVDYVVYQFHLC
Trigger: GCACAAATGAAATTGATAGACAACATAATCTACCCACATACATCAACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CCA 90 bp CATCTCTACATTCAGACTCCTCCTATATTATATGTTTATTGCTACTaGGATATCAATTTGAGCCCCAGACTTATAGCAGCATCATATGTT +
Preference number: 1 (lower is better)
Translates to: HLYIQTPPILYVYCY*DINLSPRLIAASYV
Trigger: AACATATGATGCTGCTATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTCTGAATGTAGAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR GCA 90 bp ATTTTTCATCTCTACATTCAGACTCCTCCTATATTATATGTTTATTaGTACTGGGATATCAATTTGAGCCCCAGACTTATAGCAGCATCA +
Preference number: 1 (lower is better)
Translates to: IFHLYIQTPPILYVY*YWDINLSPRLIAAS
Trigger: TGATGCTGCTATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTCTGAATGTAGAGATGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR CCA 90 bp AAGATACTGCCCTCTCTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAGTCGTGCCACTGTCCCCATaGGGAGTTTTGGATATGCTG +
Preference number: 2 (lower is better)
Translates to: KILPSLSHGTSEKRLYTVVPLSP*GVLDML
Trigger: CAGCATATCCAAAACTCCCCATGGGGACAGTGGCAC...GACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp TCCTGTTCAGGAGCCCTGAAGCTAACAGCTCCTGCAGAGAACCCCCATAGACAAATAGATGCAAACATCTaGCAACTTCATGACATTCGG +
Preference number: 2 (lower is better)
Translates to: SCSGALKLTAPAENPHRQIDANI*QLHDIR
Trigger: CCGAATGTCATGAAGTTGTCAGATGTTTGCATCTAT...TTGTCTATGGGGGTTCTCTGCAGGAGCTGTTAGCTTCAGGGCTCCTGAACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CAA 90 bp AGTCATTCTGAATGGCAGACAGTGCCACTGTCCCCATGGGGAGTTTaGGATATGCTGACAGGTGGTGGCTATCAGAATTTAATGGAACAT +
Preference number: 2 (lower is better)
Translates to: SHSEWQTVPLSPWGV*DMLTGGGYQNLMEH
Trigger: ATGTTCCATTAAATTCTGATAGCCACCACCTGTCAGCATATCCAAAACTCCCCATGGGGACAGTGGCACTGTCTGCCATTCAGAATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGGCACTGTTCTGGTTTaGATGCAATTCCACAAGAGA +
Preference number: 2 (lower is better)
Translates to: LQREKRFQLGMRTESIAMGTVLV*MQFHKR
Trigger: TCTCTTGTGGAATTGCATTCAAACCAGAACAGTGCC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR GCA 90 bp TCCTGTTCAGGAGCCCTGAAGCTAACAGCTCCTGCAGAGAACCCCCATAGACAAAAGCAAAGACTACACTaGTTATTGTTCAGATTTACC +
Preference number: 2 (lower is better)
Translates to: SCSGALKLTAPAENPHRQKQRLH*LLFRFT
Trigger: GGTAAATCTGAACAATAAGCAGTGTAGTCTTTGCTT...TTGTCTATGGGGGTTCTCTGCAGGAGCTGTTAGCTTCAGGGCTCCTGAACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CCA 90 bp CTGTACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAATCCCTGATGCCCATCTaGAAGCTCCTGCTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: LYMTSSDCIQQQMSRPHESLMPI*KLLLPF
Trigger: AAAAGGGAGCAGGAGCTTCCAGATGGGCATCAGGGA...TTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CCA 90 bp GAGCTGTACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGGTCCCTACCAAGTGTaGAATGTCCCACTCAAACAT +
Preference number: 2 (lower is better)
Translates to: ELYMTSSDCIQQQMSRPHGPYQV*NVPLKH
Trigger: ATGTTTGAGTGGGACATTCCACACTTGGTAGGGACC...ATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGAATACCAAAGGAGAGTaGAATACCAAAGGAGAGCAA +
Preference number: 2 (lower is better)
Translates to: LQREKRFQLGMRTESIAMNTKGE*NTKGEQ
Trigger: TTGCTCTCCTTTGGTATTTCACTCTCCTTTGGTATT...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR TCA 90 bp CTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAGTCATTCTGAATGGCAGACATGGAGCAATTTACTaGTGCTTTGGGTTGATGTAT +
Preference number: 2 (lower is better)
Translates to: LSHGTSEKRLYTVILNGRHGAIY*CFGLMY
Trigger: ATACATCAACCCAAAGCATCAGTAAATTGCTCCATG...TCTGCCATTCAGAATGACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGAGAGCAAAAGACCCTaGTTCTTCAGTCAATCAAAA +
Preference number: 2 (lower is better)
Translates to: LQREKRFQLGMRTESIAMESKRP*FFSQSK
Trigger: TTTTGATTGACTGAAGAACCAGGGTCTTTTGCTCTC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR CCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCCTGGGTCTAGCAATTaGTATAATTGGCACTTAATT +
Preference number: 2 (lower is better)
Translates to: LQREKRFQLGMRTESIAMPGSSN*YNWHLI
Trigger: AATTAAGTGCCAATTATACCAATTGCTAGACCCAGG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR CCA 90 bp TTCGTAGTACTTGAGCTTTATCAGTCTGAATTTCTGGCTGTCCCATTCACAATGTTGGCCTTCAGGCCATaGAGCAATTTACTGATGCTT +
Preference number: 2 (lower is better)
Translates to: FVVLELYQSEFLAVPFTMLAFRP*SNLLML
Trigger: AAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAA...CATTGTGAATGGGACAGCCAGAAATTCAGACTGATAAAGCTCAAGTACTACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CAA 90 bp AACCATTACATACAGAGTATACAGATAAACAGGGTATGGCTAGAATaGGCCTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTTGAT +
Preference number: 2 (lower is better)
Translates to: NHYIQSIQINRVWLE*AFRPWSNLLMLWVD
Trigger: ATCAACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCTAGCCATACCCTGTTTATCTGTATACTCTGTATGTAATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp CTGTACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAATTTTGGAAAATCACATaGCGAGGAGCAACACTGTTC +
Preference number: 2 (lower is better)
Translates to: LYMTSSDCIQQQMSRPHEFWKIT*RGATLF
Trigger: GAACAGTGTTGCTCCTCGTCATGTGATTTTCCAAAA...TTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp TTTTCATACCAAGTCTTCTGCATGTGGTGTGTATTTCATACTTACAGCAGATCTCAGTCACGGCACTTCTaGAAAGAGGCTTTACACAGT +
Preference number: 2 (lower is better)
Translates to: FSYQVFCMWCVFHTYSRSQSRHF*KEALHS
Trigger: ACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTG...AGATCTGCTGTAAGTATGAAATACACACCACATGCAGAAGACTTGGTATGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR GCA 90 bp CTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAGTCATTCTGAATGGCAGATTACCTAGAGTCGTATaGCATTTTGGAAAATCACAT +
Preference number: 2 (lower is better)
Translates to: LSHGTSEKRLYTVILNGRLPRVV*HFGKSH
Trigger: ATGTGATTTTCCAAAATGGCATACGACTCTAGGTAA...TCTGCCATTCAGAATGACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTCCTTTCTTGCCACATaGGACACATCTAAAGCTTTG +
Preference number: 2 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSFLAT*DTSKAL
Trigger: CAAAGCTTTAGATGTGTCCCATGTGGCAAGAAAGGA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR CAA 90 bp CAGACTCCTCCTATATTATATGTTTATTGCTACTGGGATATCAATTaGAGCCCCAGACTTATAGCAGCATCATATGTTGACCTGGATGAC +
Preference number: 2 (lower is better)
Translates to: QTPPILYVYCYWDIN*SPRLIAASYVDLDD
Trigger: GTCATCCAGGTCAACATATGATGCTGCTATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR CCA 90 bp CTGTACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAAGGATATGCTGACAGGTaGTGGCTATCAGAATTTAAT +
Preference number: 2 (lower is better)
Translates to: LYMTSSDCIQQQMSRPHEGYADR*WLSEFN
Trigger: ATTAAATTCTGATAGCCACCACCTGTCAGCATATCC...TTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGCACTAAAAGACACATaGTTGAATACCAAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQALKDT*LNTKGE
Trigger: CTCTCCTTTGGTATTCAATCATGTGTCTTTTAGTGC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR TCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGAACTAAGTATTCTATaGCACATACATAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: INTEQLGTSILRHCSGLNELSIL*HIHREM
Trigger: CATCTCCCTATGTATGTGTCATAGAATACTTAGTTC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR TCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATAAGTTTGGAAAACATTaGGCCAAAAGAGGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: INTEQLGTSILRHCSGLNKFGKH*AKRGAF
Trigger: AAAAGCACCTCTTTTGGCTCAATGTTTTCCAAACTT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR TCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATAGTTCAAGGAAAGGATaGCTGAACATCTTCATAAAG +
Preference number: 2 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSSRKG*LNIFIK
Trigger: CTTTATGAAGATGTTCAGTCATCCTTTCCTTGAACT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR TCA 90 bp TACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAAGATACTGATGCTTTGGGTTaGTGTATGTGGGTAGATTAT +
Preference number: 2 (lower is better)
Translates to: YMTSSDCIQQQMSRPHEDTDALG*CMWVDY
Trigger: ATAATCTACCCACATACATCAACCCAAAGCATCAGT...ATCTTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp TATTTCATACTTACAGCAGATCTCAATTTGTATTGGCCATATTTCAAGGGCTCATTTACACAGTCATTCTaGATGGCAGACAGTGCCACT +
Preference number: 2 (lower is better)
Translates to: YFILTADLNLYWPYFKGSFTQSF*MADSAT
Trigger: AGTGGCACTGTCTGCCATTCAGAATGACTGTGTAAA...TGAGCCCTTGAAATATGGCCAATACAAATTGAGATCTGCTGTAAGTATGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CCA 90 bp CTGTACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAAAGAACCCCACCTTGTTaGTCAAATAAGTACAATTGT +
Preference number: 2 (lower is better)
Translates to: LYMTSSDCIQQQMSRPHERTPPC*SNKYNC
Trigger: ACAATTGTACTTATTTGACCAACAAGGTGGGGTTCT...TTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGTTATGTTTACACCTATaGTACAGTTGCCTTGGAACA +
Preference number: 2 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQLCLHL*YSCLGT
Trigger: TGTTCCAAGGCAACTGTATCATAGGTGTAAACATAA...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR CAA 90 bp TATTTTTCATCTCTACATTCAGACTCCTCCTATATTATATGTTTATaGCTACTGGGATATCAATTTGAGCCCCAGACTTATAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: YFSSLHSDSSYIICL*LLGYQFEPQTYSSI
Trigger: GATGCTGCTATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTCTGAATGTAGAGATGAAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR GCA 90 bp TATTTCATACTTACAGCAGATCTCAATTTGTATTGGCCATATTTCAAGGGCTCAGAACATAATTTACAATaGAGAATTGTTCTAGGTCCC +
Preference number: 2 (lower is better)
Translates to: YFILTADLNLYWPYFKGSEHNLQ*RIVLGP
Trigger: GGGACCTAGAACAATTCTGCATTGTAAATTATGTTC...TGAGCCCTTGAAATATGGCCAATACAAATTGAGATCTGCTGTAAGTATGAAATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CCA 72 bp CTAACAGCTCCTGCAGAGAACCCCCATAGACAAGACTaGAGTATCCCTGATGCCCATCTGGAAGCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: LTAPAENPHRQD*SIPDAHLEAPA
Trigger: AGCAGGAGCTTCCAGATGGGCATCAGGGATACTCCAGTCTTGTCTATGGGGGTTCTCTGCAGGAGCTGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR GCA 72 bp CATCTGGAAGCTCCTGCTCCCTTTTCCCAAAGATACTaGCCTCTCTCAGTCACGGCACTTCTGAAAAGAGGC +
Preference number: 3 (lower is better)
Translates to: HLEAPAPFSQRY*PLSVTALLKRG
Trigger: GCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTTTGGGAAAAGGGAGCAGGAGCTTCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CCA 72 bp AGTCATTCTGAATGGCAGACAGTGCCACTGTCCCCATaGGGAGTTTTGGATATGCTGACAGGTGGTGGCTAT +
Preference number: 3 (lower is better)
Translates to: SHSEWQTVPLSP*GVLDMLTGGGY
Trigger: ATAGCCACCACCTGTCAGCATATCCAAAACTCCCCATGGGGACAGTGGCACTGTCTGCCATTCAGAATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR TCA 72 bp CATGGTTGCAGAGAGAAAAGCGATTCCAACTTGGGATaGGGACAGAGTCAATTGCCATGCTTGTTGCCACTG +
Preference number: 3 (lower is better)
Translates to: HGCREKSDSNLG*GQSQLPCLLPL
Trigger: CAGTGGCAACAAGCATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR TCA 72 bp CCCAAAGATACTGCCCTCTCTCAGTCACGGCACTTCTaGAAAGAGGCTTTACACAGTCATTCTGAATGGCAG +
Preference number: 3 (lower is better)
Translates to: PKDTALSQSRHF*KEALHSHSEWQ
Trigger: CTGCCATTCAGAATGACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCCTTGCTTTGGGAATTaGAGCTGTTACCATGATTAC +
Preference number: 3 (lower is better)
Translates to: LQREKRFQLGMRTESIAMPCFGN*SCYHDY
Trigger: GTAATCATGGTAACAGCTCAAATTCCCAAAGCAAGG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGATAAATACAGAGCAGTaGGGCACATCCATTCTAAGG +
Preference number: 3 (lower is better)
Translates to: LQREKRFQLGMRTESIAMINTEQ*GTSILR
Trigger: CCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR TCA 72 bp CCATTCACAATGATTCTAAGCATAGATGCAAACATCTaGCAACTTCATGACATTCGGTCAGGCCCAAGCACA +
Preference number: 3 (lower is better)
Translates to: PFTMILSIDANI*QLHDIRSGPST
Trigger: TGTGCTTGGGCCTGACCGAATGTCATGAAGTTGTCAGATGTTTGCATCTATGCTTAGAATCATTGTGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR TCA 72 bp CTACCAAGTGTGGAATGTCCCACTCAAACATTCATGTaGGTAAAAAGAACCTGTCAAGAACCCCACCTTGTT +
Preference number: 3 (lower is better)
Translates to: LPSVECPTQTFM*VKRTCQEPHLV
Trigger: AACAAGGTGGGGTTCTTGACAGGTTCTTTTTACTCACATGAATGTTTGAGTGGGACATTCCACACTTGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CCA 72 bp ATAAACAGGGTATGGCTAGAATTGGCCTTCAGGCCATaGAGCAATTTACTGATGCTTTGGGTTGATGTATGT +
Preference number: 3 (lower is better)
Translates to: INRVWLELAFRP*SNLLMLWVDVC
Trigger: ACATACATCAACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCTAGCCATACCCTGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CAA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGGTTTATCCACTATATaGACCCTACCTCTAAAAGGA +
Preference number: 3 (lower is better)
Translates to: INTEQLGTSILRHCSGLNGLSTI*TLPLKG
Trigger: TCCTTTTAGAGGTAGGGTCAATATAGTGGATAAACC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR TCA 72 bp GATTCTAAGCATAGATGCAAACATCTGACAACTTCATaGCATTCGGTCAGGCCCAAGCACATATATGTACAA +
Preference number: 3 (lower is better)
Translates to: DSKHRCKHLTTS*HSVRPKHIYVQ
Trigger: TTGTACATATATGTGCTTGGGCCTGACCGAATGTCATGAAGTTGTCAGATGTTTGCATCTATGCTTAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR GCA 72 bp TACACTGCTTATTGTTCAGATTTACCTAGAGTCGTATaGCATTTTGGAAAATCACATGACGAGGAGCAACAC +
Preference number: 3 (lower is better)
Translates to: YTAYCSDLPRVV*HFGKSHDEEQH
Trigger: GTGTTGCTCCTCGTCATGTGATTTTCCAAAATGGCATACGACTCTAGGTAAATCTGAACAATAAGCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR TCA 72 bp CTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTTaGTGTATGTGGGTAGATTATGTTGTCTATCAATTT +
Preference number: 3 (lower is better)
Translates to: LQAMEQFTDALG*CMWVDYVVYQF
Trigger: AAATTGATAGACAACATAATCTACCCACATACATCAACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR-3UTR CAA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGACACCTATGATACAGTaGCCTTGGAACACAAAATTT +
Preference number: 3 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQTPMIQ*PWNTKF
Trigger: AAATTTTGTGTTCCAAGGCAACTGTATCATAGGTGT...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR-3UTR CAA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGTGGGGTCAAATAAGTTaGGAAAACATTGAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQWGQIS*ENIEPK
Trigger: TTTTGGCTCAATGTTTTCCAAACTTATTTGACCCCA...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR CCA 72 bp ATTCAGACTCCTCCTATATTATATGTTTATTGCTACTaGGATATCAATTTGAGCCCCAGACTTATAGCAGCA +
Preference number: 3 (lower is better)
Translates to: IQTPPILYVYCY*DINLSPRLIAA
Trigger: TGCTGCTATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR GCA 72 bp CTCTACATTCAGACTCCTCCTATATTATATGTTTATTaGTACTGGGATATCAATTTGAGCCCCAGACTTATA +
Preference number: 3 (lower is better)
Translates to: LYIQTPPILYVY*YWDINLSPRLI
Trigger: TATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTCTGAATGTAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR TCA 72 bp TCTCCTTTCTTGCCACATGGGACACATCTAAAGCTTTaGATGAATATAATCATCTTTAATAATGACAGCAGA +
Preference number: 3 (lower is better)
Translates to: SPFLPHGTHLKL*MNIIIFNNDSR
Trigger: TCTGCTGTCATTATTAAAGATGATTATATTCATTCAAAGCTTTAGATGTGTCCCATGTGGCAAGAAAGGAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR CCA 72 bp TGTTTGACAAAATTCACTGTCTCCTTTCTTGCCACATaGGACACATCTAAAGCTTTGAATGAATATAATCAT +
Preference number: 3 (lower is better)
Translates to: CLTKFTVSFLAT*DTSKALNEYNH
Trigger: ATGATTATATTCATTCAAAGCTTTAGATGTGTCCCATGTGGCAAGAAAGGAGACAGTGAATTTTGTCAAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp CTGGAAGCTCCTGCTCCCTTTTCCCAAAGATACTGCCCTCTCTCAGTCACGGCACCCCATAGACAAGACTaGAGTATCCCTGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LEAPAPFSQRYCPLSVTAPHRQD*SIPDAH
Trigger: ATGGGCATCAGGGATACTCCAGTCTTGTCTATGGGG...TGCCGTGACTGAGAGAGGGCAGTATCTTTGGGAAAAGGGAGCAGGAGCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp AAGCTAACAGCTCCTGCAGAGAACCCCCATAGACAAGACTGGAGTATCCCTGATCGACTTGTTTCTCTCTaGAATCGTTGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KLTAPAENPHRQDWSIPDRLVSL*NRWGGR
Trigger: CCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCG...ATCAGGGATACTCCAGTCTTGTCTATGGGGGTTCTCTGCAGGAGCTGTTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp GGTATGGCTAGAATTGGCCTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTCTATTCTCTGGGCAGTaGTCCCTCACCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GMARIGLQAMEQFTDALGLFSGQ*SLTQVS
Trigger: AGAGACCTGGGTGAGGGAGCACTGCCCAGAGAATAG...ACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCTAGCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGGTTGGTGGTATGTGTaGCGTTCCCACTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMGWWYV*RSHWCQ
Trigger: CTGGCACCAGTGGGAACGGCACACATACCACCAACC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATCAGCTCCGGTGGCCCTaGCTGTGGGATCCATGCCTC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNQLRWP*LWDPCL
Trigger: GAGGCATGGATCCCACAGGCAGGGCCACCGGAGCTG...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCTGAAATCGTTGGGGTaGGAGGGAGCCACCTACAGC +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMLKSLG*EGATYS
Trigger: GCTGTAGGTGGCTCCCTCCCACCCCAACGATTTCAG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTGGGATCCATGCCTCTaGTACTGGGGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNWDPCL*YWGLLG
Trigger: GCCCAGGAGGCCCCAGTAGCAGAGGCATGGATCCCA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGCTACTGGGGCCTCCTaGGCAGGTCCCATTACCTGG +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNATGAS*AGPITW
Trigger: CCAGGTAATGGGACCTGCCCAGGAGGCCCCAGTAGC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp GGTATGGCTAGAATTGGCCTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTTGTACTGGAACTGCCTaGAGCGCTGACGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: GMARIGLQAMEQFTDALGCTGTA*SADGKL
Trigger: AAGTTTTCCGTCAGCGCTTCAGGCAGTTCCAGTACA...ACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCTAGCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGTGCCCTATAAGATGTaGCCGCCGAGTGAATCGCTT +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMVPYKM*PPSESL
Trigger: AAGCGATTCACTCGGCGGTCACATCTTATAGGGCAC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTGCCTGTGGGATCCATaGCTCTGCTACTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNCLWDP*LCYWGL
Trigger: GAGGCCCCAGTAGCAGAGGCATGGATCCCACAGGCA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp CTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAGTCATTCTGAATGGCAGAGTGCCACTGTCCCCATaGGGAGTTTTGGATATGCTG +
Preference number: 4 (lower is better)
Translates to: LSHGTSEKRLYTVILNGRVPLSP*GVLDML
Trigger: CAGCATATCCAAAACTCCCCATGGGGACAGTGGCAC...TCTGCCATTCAGAATGACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGGGTCCAGAAAGTTCTaGCATTCTCCAGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMGSRKF*HSPVAP
Trigger: TGGTGCTACTGGAGAATGTCAGAACTTTCTGGACCC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp AAGATACTGCCCTCTCTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAGTCGAGTTTTGGATATGCTaGCAGGTGGTGGCTATCAGA +
Preference number: 4 (lower is better)
Translates to: KILPSLSHGTSEKRLYTVEFWIC*QVVAIR
Trigger: TCTGATAGCCACCACCTGTCAGCATATCCAAAACTC...GACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp TCCTGTTCAGGAGCCCTGAAGCTAACAGCTCCTGCAGAGAACCCCCATAGACAAGGATATGCTGACAGGTaGTGGCTATCAGAATTTAAT +
Preference number: 4 (lower is better)
Translates to: SCSGALKLTAPAENPHRQGYADR*WLSEFN
Trigger: ATTAAATTCTGATAGCCACCACCTGTCAGCATATCC...TTGTCTATGGGGGTTCTCTGCAGGAGCTGTTAGCTTCAGGGCTCCTGAACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGCAAGGATGCCTGGATTaGACAACCCAGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQQGCLD*TTQGHS
Trigger: GCTGTGGCCCTGGGTTGTGCAATCCAGGCATCCTTG...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATCTATTCTCTGGGCAGTaGTCCCTCACCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNLFSGQ*SLTQVS
Trigger: AGAGACCTGGGTGAGGGAGCACTGCCCAGAGAATAG...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCAGAGTCAATTGCCATaGTTGTTGCCACTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMQSQLP*LLPLFR
Trigger: CCTGAACAGTGGCAACAAGCATGGCAATTGACTCTG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCTTAGAGCGCATCTTTaGCTTCAGCCATTGACAGCA +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMLRAHL*LQPLTA
Trigger: TGCTGTCAATGGCTGAAGCCAAAGATGCGCTCTAAG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGCAGGTCCCATTACCTaGAGTGCAGGTGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNAGPIT*SAGDSR
Trigger: CCTAGAGTCACCTGCACTCCAGGTAATGGGACCTGC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGATAGTTCAGCTCCGGTaGCCCTGCCTGTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQIVQLR*PCLWDP
Trigger: TGGATCCCACAGGCAGGGCCACCGGAGCTGAACTAT...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp GGTATGGCTAGAATTGGCCTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTTTTTGGAAAATCACATaGCGAGGAGCAACACTGTTC +
Preference number: 4 (lower is better)
Translates to: GMARIGLQAMEQFTDALGFWKIT*RGATLF
Trigger: GAACAGTGTTGCTCCTCGTCATGTGATTTTCCAAAA...ACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCTAGCCATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp CATGACATTCGGTCAGGCCCAAGCACATATATGTACAAATCCCTATCAATTTATAGACTGGAGTATCCCTaGTGCCCATCTGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: HDIRSGPSTYMYKSLSIYRLEYP*CPSGSS
Trigger: GGAGCTTCCAGATGGGCATCAGGGATACTCCAGTCT...ATAAATTGATAGGGATTTGTACATATATGTGCTTGGGCCTGACCGAATGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGTATGCGTTCTCTGGTaGAAAGTAAGAGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMVCVLW*KVRAVS
Trigger: ACTGACAGCTCTTACTTTGCACCAGAGAACGCATAC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGAATTGCCATGCTTGTTaGCACTGTTCAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMNCHAC*HCSGKK
Trigger: CTTCTTCCCTGAACAGTGGCAACAAGCATGGCAATT...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp TTTTCATACCAAGTCTTCTGCATGTGGTGTGTATTTCATACTTACAGCAGATCTCTGAAATCGTTGGGGTaGGAGGGAGCCACCTACAGC +
Preference number: 4 (lower is better)
Translates to: FSYQVFCMWCVFHTYSRSLKSLG*EGATYS
Trigger: GCTGTAGGTGGCTCCCTCCCACCCCAACGATTTCAG...AGATCTGCTGTAAGTATGAAATACACACCACATGCAGAAGACTTGGTATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGTGTGCCGTTCCCACTaGTGCCAGTTCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQVCRSH*CQFFQE
Trigger: CTCTTGGAAGAACTGGCACCAGTGGGAACGGCACAC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGTGTCTCTCCCAGAGTaGGGTTCTGCTGATCTACCA +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNVSLPE*GSADLP
Trigger: TGGTAGATCAGCAGAACCCCACTCTGGGAGAGACAC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGCGACTTGTTTCTCTCTaGAATCGTTGGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQRLVSL*NRWGGR
Trigger: CCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCG...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp AAGATACTGCCCTCTCTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAGTCATAGATGCAAACATCTaGCAACTTCATGACATTCGG +
Preference number: 4 (lower is better)
Translates to: KILPSLSHGTSEKRLYTVIDANI*QLHDIR
Trigger: CCGAATGTCATGAAGTTGTCAGATGTTTGCATCTAT...GACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp TATTTCATACTTACAGCAGATCTCAATTTGTATTGGCCATATTTCAAGGGCTCACAAGGATGCCTGGATTaGACAACCCAGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: YFILTADLNLYWPYFKGSQGCLD*TTQGHS
Trigger: GCTGTGGCCCTGGGTTGTGCAATCCAGGCATCCTTG...TGAGCCCTTGAAATATGGCCAATACAAATTGAGATCTGCTGTAAGTATGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGCCTTGATTCAAGGATaGCTGGATTGCACAACCCAG +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNALIQG*LDCTTQ
Trigger: CTGGGTTGTGCAATCCAGGCATCCTTGAATCAAGGC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp GACAACTTCATGACATTCGGTCAGGCCCAAGCACATATATGTACAAATCCCTATCCAGAGTTTGTTAAATaGTTCATGAGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DNFMTFGQAQAHICTNPYPEFVK*FMRPSC
Trigger: GCAGCTGGGCCTCATGAAGCATTTAACAAACTCTGG...ATAGGGATTTGTACATATATGTGCTTGGGCCTGACCGAATGTCATGAAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGTCATGCATATCAACCTaGTGCTCTGGTATCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMSCIST*CSGISS
Trigger: ACTTGAGATACCAGAGCAGCAGGTTGATATGCATGA...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGTGCCGTTCCCACTGGTaGCAGTTCTTCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQCRSHW*QFFQEH
Trigger: ATGCTCTTGGAAGAACTGGCACCAGTGGGAACGGCA...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGCAGGTGACTCTAGGTaGATGGTTGGTGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNAGDSR*MVGGMC
Trigger: ACACATACCACCAACCATGCACCTAGAGTCACCTGC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGTGACTCTAGGTGCATaGTTGGTGGTATGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQVTLGA*LVVCVP
Trigger: CGGCACACATACCACCAACCATGCACCTAGAGTCAC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GAGCTGTACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATATAGAGACAAATGTGTaGTCTAGTCCCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ELYMTSSDCIQQQMSRPHIETNV*SSPSCL
Trigger: GAGGCAGCTGGGACTAGACCACACATTTGTCTCTAT...ATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGTGTACTGGAACTGCCTaGAGCGCTGACGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQCTGTA*SADGKL
Trigger: AAGTTTTCCGTCAGCGCTTCAGGCAGTTCCAGTACA...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGATGTGACCGCCGAGTaGATCGCTTTTTACATACAG +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNDVTAE*IAFYIQ
Trigger: CTGTATGTAAAAAGCGATTCACTCGGCGGTCACATC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGATAAGTCCTCTAAAGTaGGTGACCTGGTGCATAATA +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMISPLK*VTWCII
Trigger: TATTATGCACCAGGTCACTCACTTTAGAGGACTTAT...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGCACTAAAAGACACATaGTTGAATACCAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMALKDT*LNTKGE
Trigger: CTCTCCTTTGGTATTCAATCATGTGTCTTTTAGTGC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCTTGCTTTGGGAATTTaGGCTGTTACCATGATTACA +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMLALGI*AVTMIT
Trigger: TGTAATCATGGTAACAGCTCAAATTCCCAAAGCAAG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp TCATACTTACAGCAGATCTCAATTTGTATTGGCCATATTTCAAGGGCTCAAGAGGCCTTGATTCAAGGATaGCTGGATTGCACAACCCAG +
Preference number: 4 (lower is better)
Translates to: SYLQQISICIGHISRAQEALIQG*LDCTTQ
Trigger: CTGGGTTGTGCAATCCAGGCATCCTTGAATCAAGGC...CTCTTGAGCCCTTGAAATATGGCCAATACAAATTGAGATCTGCTGTAAGTATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGTTCATGAGGCCCAGCTaGTTCTCTGTACTGGAACTG +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQFMRPS*FSVLEL
Trigger: CAGTTCCAGTACAGAGAAGCAGCTGGGCCTCATGAA...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATCCAGAGTTTGTTAAATaGTTCATGAGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNPEFVK*FMRPSC
Trigger: GCAGCTGGGCCTCATGAAGCATTTAACAAACTCTGG...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTCACAGTGCCATGGTTaGAGAGAGAAAAGCGATTCC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSQCHG*REKSDS
Trigger: GGAATCGCTTTTCTCTCTGCAACCATGGCACTGTGA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTGCAAAATGGGACCCTaGAGAGCATTCCCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNCKMGP*RAFPSK
Trigger: TTTAGAGGGGAATGCTCTCCAGGGTCCCATTTTGCA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp CAACTTCATGACATTCGGTCAGGCCCAAGCACATATATGTACAAATCCCTATCATCTTACCTGCTGCTCTaGTATCTCAAGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QLHDIRSGPSTYMYKSLSSYLLL*YLKFSL
Trigger: CAGAGAGAACTTGAGATACCAGAGCAGCAGGTAAGA...TGATAGGGATTTGTACATATATGTGCTTGGGCCTGACCGAATGTCATGAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp CTGTACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAAAAAGGAAGAGGACTCTaGAGAAATCTTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LYMTSSDCIQQQMSRPHEKGRGL*RNLEAG
Trigger: CCCAGCCTCAAGATTTCTCCAGAGTCCTCTTCCTTT...TTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGTTATGTTTACACCTATaGTACAGTTGCCTTGGAACA +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMLCLHL*YSCLGT
Trigger: TGTTCCAAGGCAACTGTATCATAGGTGTAAACATAA...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGGAACTAAGTATTCTATaGCACATACATAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LQREKRFQLGMRTESIAMELSIL*HIHREM
Trigger: CATCTCCCTATGTATGTGTCATAGAATACTTAGTTC...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGGCACTGTTCTGGTTTaGATGCAATTCCACAAGAGA +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNGTVLV*MQFHKR
Trigger: TCTCTTGTGGAATTGCATTCAAACCAGAACAGTGCC...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGATTCCAACTTGGGATaGGGACAGAGTCAATTGCCA +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQDSNLG*GQSQLP
Trigger: TGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp CATGACATTCGGTCAGGCCCAAGCACATATATGTACAAATCCCTATCAATTTATCAGTCACGGCACTTCTaGAAAGAGGCTTTACACAGT +
Preference number: 4 (lower is better)
Translates to: HDIRSGPSTYMYKSLSIYQSRHF*KEALHS
Trigger: ACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTG...ATAAATTGATAGGGATTTGTACATATATGTGCTTGGGCCTGACCGAATGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATAGGATAGTTAGGAATTaGTCCAACACTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNRIVRN*SNTSSS
Trigger: GGAGCTGCTAGTGTTGGAGCAATTCCTAACTATCCT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp TTCGTAGTACTTGAGCTTTATCAGTCTGAATTTCTGGCTGTCCCATTCACAATGAGGATAGTTAGGAATTaGTCCAACACTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FVVLELYQSEFLAVPFTMRIVRN*SNTSSS
Trigger: GGAGCTGCTAGTGTTGGAGCAATTCCTAACTATCCT...CATTGTGAATGGGACAGCCAGAAATTCAGACTGATAAAGCTCAAGTACTACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTCCAAGAGCATGTCATaGATATCAACCTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSKSMS*ISTCCS
Trigger: AGAGCAGCAGGTTGATATGCATGACATGCTCTTGGA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGAGGACAGAGTCAATTaGCATGCTTGTTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQEDRVN*HACCHC
Trigger: ACAGTGGCAACAAGCATGGCAATTGACTCTGTCCTC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp AACTTTATAAAGAGCCAAATAGTAAATATTTTAGGCACTGTGGGGCACATTCACTGGTCTAGTCCCAGCTaGCTCAGCTACTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NFIKSQIVNILGTVGHIHWSSPS*LSYFLW
Trigger: CCAAAGGAAGTAGCTGAGGCAGCTGGGACTAGACCA...GTGAATGTGCCCCACAGTGCCTAAAATATTTACTATTTGGCTCTTTATAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp TACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAAGATCCATCTGGAAGCTCCTaGTCCCTTTTCCCAAAGATA +
Preference number: 4 (lower is better)
Translates to: YMTSSDCIQQQMSRPHEDPSGSS*SLFPKI
Trigger: TATCTTTGGGAAAAGGGAGCAGGAGCTTCCAGATGG...ATCTTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATATCAACCTGCTGCTCTaGTATCTCAAGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNINLLL*YLKFSL
Trigger: CAGAGAGAACTTGAGATACCAGAGCAGCAGGTTGAT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGTGAGGTTTCTCTCCTaGACTCTTTTTCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQVRFLS*TLFLVG
Trigger: CCCCACAAGAAAAAGAGTCCAGGAGAGAAACCTCAC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTCAGTATGCGTTCTCTaGTGCAAAGTAAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSVCVL*CKVRAV
Trigger: GACAGCTCTTACTTTGCACCAGAGAACGCATACTGA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp TCATACTTACAGCAGATCTCAATTTGTATTGGCCATATTTCAAGGGCTCAAGAGGGTCCCTACCAAGTGTaGAATGTCCCACTCAAACAT +
Preference number: 4 (lower is better)
Translates to: SYLQQISICIGHISRAQEGPYQV*NVPLKH
Trigger: ATGTTTGAGTGGGACATTCCACACTTGGTAGGGACC...CTCTTGAGCCCTTGAAATATGGCCAATACAAATTGAGATCTGCTGTAAGTATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp AACTTTATAAAGAGCCAAATAGTAAATATTTTAGGCACTGTGGGGCACATTCACTCCCTGATGCCCATCTaGAAGCTCCTGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NFIKSQIVNILGTVGHIHSLMPI*KLLLPF
Trigger: AAAAGGGAGCAGGAGCTTCCAGATGGGCATCAGGGA...GTGAATGTGCCCCACAGTGCCTAAAATATTTACTATTTGGCTCTTTATAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp TTTTCATACCAAGTCTTCTGCATGTGGTGTGTATTTCATACTTACAGCAGATCTCTTGAGGCTGGGGAATaGCATAGAGACAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: FSYQVFCMWCVFHTYSRSLEAGE*HRDKCV
Trigger: CACACATTTGTCTCTATGTCATTCCCCAGCCTCAAG...AGATCTGCTGTAAGTATGAAATACACACCACATGCAGAAGACTTGGTATGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp GACAACTTCATGACATTCGGTCAGGCCCAAGCACATATATGTACAAATCCCTATACTGATGCTTTGGGTTaGTGTATGTGGGTAGATTAT +
Preference number: 4 (lower is better)
Translates to: DNFMTFGQAQAHICTNPYTDALG*CMWVDY
Trigger: ATAATCTACCCACATACATCAACCCAAAGCATCAGT...ATAGGGATTTGTACATATATGTGCTTGGGCCTGACCGAATGTCATGAAGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATATAATCACAGTGCCATaGTTGCAGAGAGAAAAGCGA +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNIITVP*LQREKR
Trigger: TCGCTTTTCTCTCTGCAACCATGGCACTGTGATTAT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGATGCCCAGTAAGTTGTaGCTTCCGAGCAAAACATTT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQMPSKL*LPSKTF
Trigger: AAATGTTTTGCTCGGAAGTCACAACTTACTGGGCAT...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp GTTGGCAAACTTTATAAAGAGCCAAATAGTAAATATTTTAGGCACTGTGGGGCATTTACACAGTCATTCTaGATGGCAGACAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: VGKLYKEPNSKYFRHCGAFTQSF*MADSAT
Trigger: AGTGGCACTGTCTGCCATTCAGAATGACTGTGTAAA...TGCCCCACAGTGCCTAAAATATTTACTATTTGGCTCTTTATAAAGTTTGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGTGCATATCAACCTGCTaGTCTGGTATCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQCISTC*SGISSS
Trigger: AGAACTTGAGATACCAGAGCAGCAGGTTGATATGCA...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp AACTTTATAAAGAGCCAAATAGTAAATATTTTAGGCACTGTGGGGCACATTCACTTTTCCCAAAGATACTaGCCTCTCTCAGTCACGGCA +
Preference number: 4 (lower is better)
Translates to: NFIKSQIVNILGTVGHIHFSQRY*PLSVTA
Trigger: TGCCGTGACTGAGAGAGGGCAGTATCTTTGGGAAAA...GTGAATGTGCCCCACAGTGCCTAAAATATTTACTATTTGGCTCTTTATAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGTTTCTTCTTCAGAATaGGTTCTCTGGTGCCCTATA +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQVSSSE*VLWCPI
Trigger: TATAGGGCACCAGAGAACCCATTCTGAAGAAGAAAC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTCTAAGGCACTGTTCTaGTTTGAATGCAATTCCACA +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSKALF*FECNST
Trigger: TGTGGAATTGCATTCAAACCAGAACAGTGCCTTAGA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGAAAGCGATTCCAACTTaGGATGAGGACAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQKAIPT*DEDRVN
Trigger: ATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTT...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GTTGGCAAACTTTATAAAGAGCCAAATAGTAAATATTTTAGGCACTGTGGGGCACTCAGCTACTTCCTTTaGACCAATCACAAAGATCCC +
Preference number: 4 (lower is better)
Translates to: VGKLYKEPNSKYFRHCGALSYFL*TNHKDP
Trigger: GGGATCTTTGTGATTGGTCCAAAGGAAGTAGCTGAG...TGCCCCACAGTGCCTAAAATATTTACTATTTGGCTCTTTATAAAGTTTGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp TTCGTAGTACTTGAGCTTTATCAGTCTGAATTTCTGGCTGTCCCATTCACAATGTATGCTGACAGGTGGTaGCTATCAGAATTTAATGGA +
Preference number: 4 (lower is better)
Translates to: FVVLELYQSEFLAVPFTMYADRW*LSEFNG
Trigger: TCCATTAAATTCTGATAGCCACCACCTGTCAGCATA...CATTGTGAATGGGACAGCCAGAAATTCAGACTGATAAAGCTCAAGTACTACGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTTAAGACTTGATCCATaGCAAAAACTTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNLRLDP*QKLFPH
Trigger: GTGTGGGAAAAGTTTTTGTCATGGATCAAGTCTTAA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp TTTTCATACCAAGTCTTCTGCATGTGGTGTGTATTTCATACTTACAGCAGATCTCTCAAGAGCTGTACATaGCTAGTAGTGACTGTATTC +
Preference number: 4 (lower is better)
Translates to: FSYQVFCMWCVFHTYSRSLKSCT*LVVTVF
Trigger: GAATACAGTCACTACTAGTCATGTACAGCTCTTGAG...AGATCTGCTGTAAGTATGAAATACACACCACATGCAGAAGACTTGGTATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp CAACTTCATGACATTCGGTCAGGCCCAAGCACATATATGTACAAATCCCTATCAAAGCAAAGACTACACTaGTTATTGTTCAGATTTACC +
Preference number: 4 (lower is better)
Translates to: QLHDIRSGPSTYMYKSLSKQRLH*LLFRFT
Trigger: GGTAAATCTGAACAATAAGCAGTGTAGTCTTTGCTT...TGATAGGGATTTGTACATATATGTGCTTGGGCCTGACCGAATGTCATGAAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp TTCGTAGTACTTGAGCTTTATCAGTCTGAATTTCTGGCTGTCCCATTCACAATGTCATACCAAGTCTTCTaGATGTGGTGTGTATTTCAT +
Preference number: 4 (lower is better)
Translates to: FVVLELYQSEFLAVPFTMSYQVF*MWCVFH
Trigger: ATGAAATACACACCACATGCAGAAGACTTGGTATGA...CATTGTGAATGGGACAGCCAGAAATTCAGACTGATAAAGCTCAAGTACTACGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATAGTTTACAGTTTATCTaGAGCCTCACTTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSLQFI*SLTSQI
Trigger: AATCTGAGAAGTGAGGCTCCAGATAAACTGTAAACT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGAGAGCAAAAGACCCTaGTTCTTCAGTCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQESKRP*FFSQSK
Trigger: TTTTGATTGACTGAAGAACCAGGGTCTTTTGCTCTC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATTATGTTTATTGCTACTaGGATATCAATTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNYVYCY*DINLSP
Trigger: GGGGCTCAAATTGATATCCCAGTAGCAATAAACATA...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
3UTR CAA 72 bp TGTGGTGTGTATTTCATACTTACAGCAGATCTCAATTaGTATTGGCCATATTTCAAGGGCTCAAGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CGVYFILTADLN*YWPYFKGSRAV
Trigger: TACAGCTCTTGAGCCCTTGAAATATGGCCAATACAAATTGAGATCTGCTGTAAGTATGAAATACACACCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGTGTCTATAAAGGTCTaGACTACGAAGGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQVSIKV*TTKESF
Trigger: AAAAGATTCCTTCGTAGTTCAGACCTTTATAGACAC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGAAGTTTGGAAAACATTaGGCCAAAAGAGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQKFGKH*AKRGAF
Trigger: AAAAGCACCTCTTTTGGCTCAATGTTTTCCAAACTT...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR TCA 90 bp TTTTCATACCAAGTCTTCTGCATGTGGTGTGTATTTCATACTTACAGCAGATCTAGGAATGCACTAATGTaGAAAGCAAAGACTACACTG +
Preference number: 4 (lower is better)
Translates to: FSYQVFCMWCVFHTYSRSRNALM*KAKTTL
Trigger: CAGTGTAGTCTTTGCTTTTCACATTAGTGCATTCCT...AGATCTGCTGTAAGTATGAAATACACACCACATGCAGAAGACTTGGTATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp TACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAAGATAGTTTACAGTTTATCTaGAGCCTCACTTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: YMTSSDCIQQQMSRPHEDSLQFI*SLTSQI
Trigger: AATCTGAGAAGTGAGGCTCCAGATAAACTGTAAACT...ATCTTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATATGAATAACGAGGCTTaGTCTCTGTCTAAAACTTTT +
Preference number: 4 (lower is better)
Translates to: INTEQLGTSILRHCSGLNMNNEA*SLSKTF
Trigger: AAAAGTTTTAGACAGAGACCAAGCCTCGTTATTCAT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGCCTGGGTCTAGCAATTaGTATAATTGGCACTTAATT +
Preference number: 4 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQPGSSN*YNWHLI
Trigger: AATTAAGTGCCAATTATACCAATTGCTAGACCCAGG...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CCA 90 bp CATGACATTCGGTCAGGCCCAAGCACATATATGTACAAATCCCTATCAATTTATCAAGTCTTCTGCATGTaGTGTGTATTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: HDIRSGPSTYMYKSLSIYQVFCM*CVFHTY
Trigger: GTAAGTATGAAATACACACCACATGCAGAAGACTTG...ATAAATTGATAGGGATTTGTACATATATGTGCTTGGGCCTGACCGAATGTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR TCA 90 bp TGCACTAATGTGAAAAGCAAAGACTACACTGCTTATTGTTCAGATTTACCTAGACATGGAGCAATTTACTaGTGCTTTGGGTTGATGTAT +
Preference number: 4 (lower is better)
Translates to: CTNVKSKDYTAYCSDLPRHGAIY*CFGLMY
Trigger: ATACATCAACCCAAAGCATCAGTAAATTGCTCCATG...TCTAGGTAAATCTGAACAATAAGCAGTGTAGTCTTTGCTTTTCACATTAGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CCA 90 bp TTTTCATACCAAGTCTTCTGCATGTGGTGTGTATTTCATACTTACAGCAGATCTAGAACCCCACCTTGTTaGTCAAATAAGTACAATTGT +
Preference number: 4 (lower is better)
Translates to: FSYQVFCMWCVFHTYSRSRTPPC*SNKYNC
Trigger: ACAATTGTACTTATTTGACCAACAAGGTGGGGTTCT...AGATCTGCTGTAAGTATGAAATACACACCACATGCAGAAGACTTGGTATGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR GCA 90 bp TTTTCATACCAAGTCTTCTGCATGTGGTGTGTATTTCATACTTACAGCAGATCTGAACATAATTTACAATaGAGAATTGTTCTAGGTCCC +
Preference number: 4 (lower is better)
Translates to: FSYQVFCMWCVFHTYSRSEHNLQ*RIVLGP
Trigger: GGGACCTAGAACAATTCTGCATTGTAAATTATGTTC...AGATCTGCTGTAAGTATGAAATACACACCACATGCAGAAGACTTGGTATGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
3UTR CAA 72 bp TCTCTACATTCAGACTCCTCCTATATTATATGTTTATaGCTACTGGGATATCAATTTGAGCCCCAGACTTAT +
Preference number: 4 (lower is better)
Translates to: SLHSDSSYIICL*LLGYQFEPQTY
Trigger: ATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTCTGAATGTAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR GCA 90 bp AACTTTATAAAGAGCCAAATAGTAAATATTTTAGGCACTGTGGGGCACATTCACTTACCTAGAGTCGTATaGCATTTTGGAAAATCACAT +
Preference number: 4 (lower is better)
Translates to: NFIKSQIVNILGTVGHIHLPRVV*HFGKSH
Trigger: ATGTGATTTTCCAAAATGGCATACGACTCTAGGTAA...GTGAATGTGCCCCACAGTGCCTAAAATATTTACTATTTGGCTCTTTATAAAGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS GCA 90 bp ACCATAGTTCAGCTCCGGTGGCCCTGCCTGTGGGATCCATGCCTCTaGTACTGGGGCCTCCTGGGCAGGTCCCATTACCTGGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: TIVQLRWPCLWDPCL*YWGLLGRSHYLECR
Trigger: CCTGCACTCCAGGTAATGGGACCTGCCCAGGAGGCCCCAGTAGCAGAGGCATGGATCCCACAGGCAGGGCCACCGGAGCTGAACTATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS GCA 90 bp AGTAGCACCATAGTTCAGCTCCGGTGGCCCTGCCTGTGGGATCCATaGCTCTGCTACTGGGGCCTCCTGGGCAGGTCCCATTACCTGGAG +
Preference number: 5 (lower is better)
Translates to: SSTIVQLRWPCLWDP*LCYWGLLGRSHYLE
Trigger: CTCCAGGTAATGGGACCTGCCCAGGAGGCCCCAGTAGCAGAGGCATGGATCCCACAGGCAGGGCCACCGGAGCTGAACTATGGTGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS GCA 90 bp GTTCTGACATTCTCCAGTAGCACCATAGTTCAGCTCCGGTGGCCCTaGCTGTGGGATCCATGCCTCTGCTACTGGGGCCTCCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: VLTFSSSTIVQLRWP*LWDPCLCYWGLLGR
Trigger: CCTGCCCAGGAGGCCCCAGTAGCAGAGGCATGGATCCCACAGGCAGGGCCACCGGAGCTGAACTATGGTGCTACTGGAGAATGTCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CCA 90 bp ACATTCTCCAGTAGCACCATAGTTCAGCTCCGGTGGCCCTGCCTGTaGGATCCATGCCTCTGCTACTGGGGCCTCCTGGGCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: TFSSSTIVQLRWPCL*DPCLCYWGLLGRSH
Trigger: ATGGGACCTGCCCAGGAGGCCCCAGTAGCAGAGGCATGGATCCCACAGGCAGGGCCACCGGAGCTGAACTATGGTGCTACTGGAGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS GCA 90 bp GCCTCCTGGGCAGGTCCCATTACCTGGAGTGCAGGTGACTCTAGGTaGATGGTTGGTGGTATGTGTGCCGTTCCCACTGGTGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: ASWAGPITWSAGDSR*MVGGMCAVPTGASS
Trigger: AGAACTGGCACCAGTGGGAACGGCACACATACCACCAACCATGCACCTAGAGTCACCTGCACTCCAGGTAATGGGACCTGCCCAGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CCA 90 bp ATCCATGCCTCTGCTACTGGGGCCTCCTGGGCAGGTCCCATTACCTaGAGTGCAGGTGACTCTAGGTGCATGGTTGGTGGTATGTGTGCC +
Preference number: 5 (lower is better)
Translates to: IHASATGASWAGPIT*SAGDSRCMVGGMCA
Trigger: GGCACACATACCACCAACCATGCACCTAGAGTCACCTGCACTCCAGGTAATGGGACCTGCCCAGGAGGCCCCAGTAGCAGAGGCATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CCA 90 bp CCTGGGCAGGTCCCATTACCTGGAGTGCAGGTGACTCTAGGTGCATaGTTGGTGGTATGTGTGCCGTTCCCACTGGTGCCAGTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PGQVPLPGVQVTLGA*LVVCVPFPLVPVLP
Trigger: TGGAAGAACTGGCACCAGTGGGAACGGCACACATACCACCAACCATGCACCTAGAGTCACCTGCACTCCAGGTAATGGGACCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS TCA 90 bp AGTTTATCTGGAGCCTCACTTCTCAGATTCCGACTTGTTTCTCTCTaGAATCGTTGGGGTGGGAGGGAGCCACCTACAGCGCCTCAGCGC +
Preference number: 5 (lower is better)
Translates to: SLSGASLLRFRLVSL*NRWGGREPPTAPQR
Trigger: GCGCTGAGGCGCTGTAGGTGGCTCCCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCGGAATCTGAGAAGTGAGGCTCCAGATAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS-3UTR CAA 90 bp TCCTGTTCAGGAGCCCTGAAGCTAACAGCTCCTGCAGAGAACCCCCATAGACAATCCCCATGGGGAGTTTaGGATATGCTGACAGGTGGT +
Preference number: 5 (lower is better)
Translates to: SCSGALKLTAPAENPHRQSPWGV*DMLTGG
Trigger: ACCACCTGTCAGCATATCCAAAACTCCCCATGGGGA...TTGTCTATGGGGGTTCTCTGCAGGAGCTGTTAGCTTCAGGGCTCCTGAACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS GCA 90 bp ATCATATTCTTGAAACACAGAGCCTTGATTCAAGGATGCCTGGATTaGACAACCCAGGGCCACAGCCATCGCCCCCTTCCAGCAGTTTAC +
Preference number: 5 (lower is better)
Translates to: IIFLKHRALIQGCLD*TTQGHSHRPLPAVY
Trigger: GTAAACTGCTGGAAGGGGGCGATGGCTGTGGCCCTGGGTTGTGCAATCCAGGCATCCTTGAATCAAGGCTCTGTGTTTCAAGAATATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS GCA 90 bp AGGCTGGGGAATGACATAGAGACAAATGTGTGGTCTAGTCCCAGCTaGCTCAGCTACTTCCTTTGGACCAATCACAAAGATCCCACATTC +
Preference number: 5 (lower is better)
Translates to: RLGNDIETNVWSSPS*LSYFLWTNHKDPTF
Trigger: GAATGTGGGATCTTTGTGATTGGTCCAAAGGAAGTAGCTGAGGCAGCTGGGACTAGACCACACATTTGTCTCTATGTCATTCCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGACTCTAGGTGCATGGTaGGTGGTATGTGTGCCGTTC +
Preference number: 5 (lower is better)
Translates to: LQREKRFQLGMRTESIAMTLGAW*VVCVPF
Trigger: GAACGGCACACATACCACCAACCATGCACCTAGAGT...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CCA 90 bp GAGACAAATGTGTGGTCTAGTCCCAGCTGCCTCAGCTACTTCCTTTaGACCAATCACAAAGATCCCACATTCTTTTCTTACCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ETNVWSSPSCLSYFL*TNHKDPTFFSYLLL
Trigger: GAGCAGCAGGTAAGAAAAGAATGTGGGATCTTTGTGATTGGTCCAAAGGAAGTAGCTGAGGCAGCTGGGACTAGACCACACATTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGTTCTCTCTGAAATCGTaGGGGTGGGAGGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQFSLKS*GWEGAT
Trigger: GGTGGCTCCCTCCCACCCCAACGATTTCAGAGAGAA...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCCTGGACTCTTTTTCTaGTGGGGTTTAGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: LQREKRFQLGMRTESIAMPGLFF*WGLGLR
Trigger: TCTCAACCCTAAACCCCACAAGAAAAAGAGTCCAGG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGCAATTGCCATGCTTGTaGCCACTGTTCAGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: LQREKRFQLGMRTESIAMQLPCL*PLFREE
Trigger: TTCTTCCCTGAACAGTGGCAACAAGCATGGCAATTG...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp AAGATACTGCCCTCTCTCAGTCACGGCACTTCTGAAAAGAGGCTTTACACAGTCAAAGCACTGACTCATTaGCTGAGTTCAGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: KILPSLSHGTSEKRLYTVKALTH*LSSAEE
Trigger: CTCTTCTGCTGAACTCAGCAAATGAGTCAGTGCTTT...GACTGTGTAAAGCCTCTTTTCAGAAGTGCCGTGACTGAGAGAGGGCAGTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp GGTATGGCTAGAATTGGCCTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTGAGTCGTATGCCATTTaGGAAAATCACATGACGAGG +
Preference number: 5 (lower is better)
Translates to: GMARIGLQAMEQFTDALGESYAI*ENHMTR
Trigger: CCTCGTCATGTGATTTTCCAAAATGGCATACGACTC...ACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCTAGCCATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGAGGCACTGTTCTGGTTaGAATGCAATTCCACAAGAG +
Preference number: 5 (lower is better)
Translates to: LQREKRFQLGMRTESIAMRHCSG*NAIPQE
Trigger: CTCTTGTGGAATTGCATTCAAACCAGAACAGTGCCT...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp TATTTCATACTTACAGCAGATCTCAATTTGTATTGGCCATATTTCAAGGGCTCATTCTCTCTGAAATCGTaGGGGTGGGAGGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: YFILTADLNLYWPYFKGSFSLKS*GWEGAT
Trigger: GGTGGCTCCCTCCCACCCCAACGATTTCAGAGAGAA...TGAGCCCTTGAAATATGGCCAATACAAATTGAGATCTGCTGTAAGTATGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp GGTATGGCTAGAATTGGCCTTCAGGCCATGGAGCAATTTACTGATGCTTTGGGTTTCTCAGATTCCGACTaGTTTCTCTCTGAAATCGTT +
Preference number: 5 (lower is better)
Translates to: GMARIGLQAMEQFTDALGFSDSD*FLSEIV
Trigger: AACGATTTCAGAGAGAAACAAGTCGGAATCTGAGAA...ACCCAAAGCATCAGTAAATTGCTCCATGGCCTGAAGGCCAATTCTAGCCATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGTACTGGGATATCAATTaGAGCCCCAGACTTATAGCA +
Preference number: 5 (lower is better)
Translates to: LQREKRFQLGMRTESIAMYWDIN*SPRLIA
Trigger: TGCTATAAGTCTGGGGCTCAAATTGATATCCCAGTA...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGTTCTCAGATTCCGACTaGTTTCTCTCTGAAATCGTT +
Preference number: 5 (lower is better)
Translates to: LQREKRFQLGMRTESIAMFSDSD*FLSEIV
Trigger: AACGATTTCAGAGAGAAACAAGTCGGAATCTGAGAA...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATAGTCAATTGCCATGCTaGTTGCCACTGTTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSQLPC*LPLFRE
Trigger: TTCCCTGAACAGTGGCAACAAGCATGGCAATTGACT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp TTGCAGAGAGAAAAGCGATTCCAACTTGGGATGAGGACAGAGTCAATTGCCATGTGGGGTCAAATAAGTTaGGAAAACATTGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LQREKRFQLGMRTESIAMWGQIS*ENIEPK
Trigger: TTTTGGCTCAATGTTTTCCAAACTTATTTGACCCCA...CATGGCAATTGACTCTGTCCTCATCCCAAGTTGGAATCGCTTTTCTCTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp TACATGACTAGTAGTGACTGTATTCAGCAGCAAATGTCTAGACCACATGAAGATCCTCAGCTACTTCCTTaGGACCAATCACAAAGATCC +
Preference number: 5 (lower is better)
Translates to: YMTSSDCIQQQMSRPHEDPQLLP*DQSQRS
Trigger: GGATCTTTGTGATTGGTCCAAAGGAAGTAGCTGAGG...ATCTTCATGTGGTCTAGACATTTGCTGCTGAATACAGTCACTACTAGTCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGCTGTACATAGTCTTTTaGCAAAATGGGACCCTGGAG +
Preference number: 5 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQLYIVF*QNGTLE
Trigger: CTCCAGGGTCCCATTTTGCAAAAAGACTATGTACAG...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGATGAGAAGTCTTCCCTaGCTTTGGGAATTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQMRSLP*LWEFEL
Trigger: CAGCTCAAATTCCCAAAGCAAGGGAAGACTTCTCAT...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp GTTGGCAAACTTTATAAAGAGCCAAATAGTAAATATTTTAGGCACTGTGGGGCAGACTCTGGAGAAATCTaGAGGCTGGGGAATGACATA +
Preference number: 5 (lower is better)
Translates to: VGKLYKEPNSKYFRHCGADSGEI*RLGNDI
Trigger: TATGTCATTCCCCAGCCTCAAGATTTCTCCAGAGTC...TGCCCCACAGTGCCTAAAATATTTACTATTTGGCTCTTTATAAAGTTTGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS-3UTR CAA 90 bp ATAAATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATAGTTCATGTCAAGTTTaGGTAATGGATATCCAGGGT +
Preference number: 5 (lower is better)
Translates to: INTEQLGTSILRHCSGLNSSCQV*VMDIQG
Trigger: ACCCTGGATATCCATTACCAAAACTTGACATGAACT...ATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGCCTTGCTTTGGGAATTaGAGCTGTTACCATGATTAC +
Preference number: 5 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQPCFGN*SCYHDY
Trigger: GTAATCATGGTAACAGCTCAAATTCCCAAAGCAAGG...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS-3UTR CAA 90 bp GCTTGGGAGCAACATAACTATACTGACAGCTATAGAAATATCTGTTTAAGGCAGGCTGATCTACCAGTTTaGCTAAATCTGTCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: AWEQHNYTDSYRNICLRQADLPV*LNLSVN
Trigger: ATTTACAGACAGATTTAGCAAAACTGGTAGATCAGC...CTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTGCTCCCAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS GCA 72 bp CAGCTCCGGTGGCCCTGCCTGTGGGATCCATGCCTCTaGTACTGGGGCCTCCTGGGCAGGTCCCATTACCTG +
Preference number: 6 (lower is better)
Translates to: QLRWPCLWDPCL*YWGLLGRSHYL
Trigger: CAGGTAATGGGACCTGCCCAGGAGGCCCCAGTAGCAGAGGCATGGATCCCACAGGCAGGGCCACCGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CCA 72 bp CAGATTCCGACTTGTTTCTCTCTGAAATCGTTGGGGTaGGAGGGAGCCACCTACAGCGCCTCAGCGCCCACG +
Preference number: 6 (lower is better)
Translates to: QIPTCFSLKSLG*EGATYSASAPT
Trigger: CGTGGGCGCTGAGGCGCTGTAGGTGGCTCCCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCGGAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS CCA 72 bp TCTGCTACTGGGGCCTCCTGGGCAGGTCCCATTACCTaGAGTGCAGGTGACTCTAGGTGCATGGTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: SATGASWAGPIT*SAGDSRCMVGG
Trigger: ACCACCAACCATGCACCTAGAGTCACCTGCACTCCAGGTAATGGGACCTGCCCAGGAGGCCCCAGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CAA 90 bp GGGCAGGTCCCATTACCTGGAGTGCAGGTGACTCTAGGTGCATGGTaGGTGGTATGTGTGCCGTTCCCACTGGTGCCAGTTCTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: GQVPLPGVQVTLGAW*VVCVPFPLVPVLPR
Trigger: TCTTGGAAGAACTGGCACCAGTGGGAACGGCACACATACCACCAACCATGCACCTAGAGTCACCTGCACTCCAGGTAATGGGACCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS GCA 72 bp GCAGGTCCCATTACCTGGAGTGCAGGTGACTCTAGGTaGATGGTTGGTGGTATGTGTGCCGTTCCCACTGGT +
Preference number: 6 (lower is better)
Translates to: AGPITWSAGDSR*MVGGMCAVPTG
Trigger: ACCAGTGGGAACGGCACACATACCACCAACCATGCACCTAGAGTCACCTGCACTCCAGGTAATGGGACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CCA 72 bp GTCCCATTACCTGGAGTGCAGGTGACTCTAGGTGCATaGTTGGTGGTATGTGTGCCGTTCCCACTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: VPLPGVQVTLGA*LVVCVPFPLVP
Trigger: TGGCACCAGTGGGAACGGCACACATACCACCAACCATGCACCTAGAGTCACCTGCACTCCAGGTAATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS TCA 72 bp GGAGCCTCACTTCTCAGATTCCGACTTGTTTCTCTCTaGAATCGTTGGGGTGGGAGGGAGCCACCTACAGCG +
Preference number: 6 (lower is better)
Translates to: GASLLRFRLVSL*NRWGGREPPTA
Trigger: CGCTGTAGGTGGCTCCCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCGGAATCTGAGAAGTGAGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS CAA 72 bp ACTTCTCAGATTCCGACTTGTTTCTCTCTGAAATCGTaGGGGTGGGAGGGAGCCACCTACAGCGCCTCAGCG +
Preference number: 6 (lower is better)
Translates to: TSQIPTCFSLKS*GWEGATYSASA
Trigger: CGCTGAGGCGCTGTAGGTGGCTCCCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCGGAATCTGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS TCA 72 bp CATGAGGCCCAGCTGCTTCTCTGTACTGGAACTGCCTaGAGCGCTGACGGAAAACTTCACAGTCAGTATCAT +
Preference number: 6 (lower is better)
Translates to: HEAQLLLCTGTA*SADGKLHSQYH
Trigger: ATGATACTGACTGTGAAGTTTTCCGTCAGCGCTTCAGGCAGTTCCAGTACAGAGAAGCAGCTGGGCCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS GCA 72 bp GTGCATGGTTGGTGGTATGTGTGCCGTTCCCACTGGTaGCAGTTCTTCCAAGAGCATGTCATGCATATCAAC +
Preference number: 6 (lower is better)
Translates to: VHGWWYVCRSHW*QFFQEHVMHIN
Trigger: GTTGATATGCATGACATGCTCTTGGAAGAACTGGCACCAGTGGGAACGGCACACATACCACCAACCATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339249.5
CDS CAA 90 bp CAGCAGTTTACAGTTTATCTGGAGCCTCACTTCTCAGATTCCGACTaGTTTCTCTCTGAAATCGTTGGGGTGGGAGGGAGCCACCTACAG +
Preference number: 6 (lower is better)
Translates to: QQFTVYLEPHFSDSD*FLSEIVGVGGSHLQ
Trigger: CTGTAGGTGGCTCCCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCGGAATCTGAGAAGTGAGGCTCCAGATAAACTGTAAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS CAA 90 bp TATCATATTCTTGAAACACAGAGCCTTGATTCAAGGATGCCTGGATaGCACAACCCAGGGCCACAGCCATCGCCCCCTTCCAGCAGTTTA +
Preference number: 6 (lower is better)
Translates to: YHILETQSLDSRMPG*HNPGPQPSPPSSSL
Trigger: TAAACTGCTGGAAGGGGGCGATGGCTGTGGCCCTGGGTTGTGCAATCCAGGCATCCTTGAATCAAGGCTCTGTGTTTCAAGAATATGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS CCA 72 bp ATCTTGAGGCTGGGGAATGACATAGAGACAAATGTGTaGTCTAGTCCCAGCTGCCTCAGCTACTTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: ILRLGNDIETNV*SSPSCLSYFLW
Trigger: CCAAAGGAAGTAGCTGAGGCAGCTGGGACTAGACCACACATTTGTCTCTATGTCATTCCCCAGCCTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS CAA 72 bp ACAGTTTATCTGGAGCCTCACTTCTCAGATTCCGACTaGTTTCTCTCTGAAATCGTTGGGGTGGGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: TVYLEPHFSDSD*FLSEIVGVGGS
Trigger: GCTCCCTCCCACCCCAACGATTTCAGAGAGAAACAAGTCGGAATCTGAGAAGTGAGGCTCCAGATAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339249.5
ENST00000370761.7
CDS CCA 72 bp GTGTGGTCTAGTCCCAGCTGCCTCAGCTACTTCCTTTaGACCAATCACAAAGATCCCACATTCTTTTCTTAC +
Preference number: 6 (lower is better)
Translates to: VWSSPSCLSYFL*TNHKDPTFFSY
Trigger: GTAAGAAAAGAATGTGGGATCTTTGTGATTGGTCCAAAGGAAGTAGCTGAGGCAGCTGGGACTAGACCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS GCA 72 bp AATGACATAGAGACAAATGTGTGGTCTAGTCCCAGCTaGCTCAGCTACTTCCTTTGGACCAATCACAAAGAT +
Preference number: 6 (lower is better)
Translates to: NDIETNVWSSPS*LSYFLWTNHKD
Trigger: ATCTTTGTGATTGGTCCAAAGGAAGTAGCTGAGGCAGCTGGGACTAGACCACACATTTGTCTCTATGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370761.7
CDS CAA 72 bp GAATTGAGTCTGATAGAGTTAAAAGCACTGACTCATTaGCTGAGTTCAGCAGAAGAGAAAAAGGAAGAGGAC +
Preference number: 6 (lower is better)
Translates to: ELSLIELKALTH*LSSAEEKKEED
Trigger: GTCCTCTTCCTTTTTCTCTTCTGCTGAACTCAGCAAATGAGTCAGTGCTTTTAACTCTATCAGACTCAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370761.7