RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF446 (Homo sapiens)

Ensembl gene IDs: ENSG00000083838

Ensembl transcript IDs: ENST00000335841.8, ENST00000391694.4, ENST00000594369.6, ENST00000594468.1, ENST00000596341.5, ENST00000600013.5, ENST00000610298.1, ENST00000622313.4

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGAACCTCCGGCCGGTGGCCCTTGCGG +
Preference number: 1 (lower is better)
Translates to: EAVSRPREHRGPEGL*CLAAHGTSGRWPLR
Trigger: CCGCAAGGGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR GCA 90 bp AAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTaGTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGC +
Preference number: 1 (lower is better)
Translates to: KILTHTGSRRNGSQL*FPGSSAALHTETSG
Trigger: GCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR TCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGAACTCCGGGGGCCTGTaGGTGAGCGTCGGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: QALVSHRREPRPPSRRQGNSGGL*VSVGGG
Trigger: ACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTT...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR TCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGCTGCGACTTCCAGCTaGAGCTGCACCCGCACTCCT +
Preference number: 2 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGAATSS*SCTRTP
Trigger: AGGAGTGCGGGTGCAGCTTCAGCTGGAAGTCGCAGC...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR GCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGCCTCCAGAGTCTTCTaGTGGTGCCCCAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGASRVF*WCPRGC
Trigger: ACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGC...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCACTCTGGCATCCCCTaGTGCCTCCAGAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGHSGIP*CLQSLL
Trigger: CAGAAGACTCTGGAGGCAGCAGGGGATGCCAGAGTG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGAGCGTCGGGGGTGGTaGGGAAAGGCCACCTCCCCT +
Preference number: 2 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGERRGW*GKATSP
Trigger: AGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR GCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGA +
Preference number: 2 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPGPEGL*CLAAHG
Trigger: TCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR GCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCGCCTCCAGAGTCTTCTaGTGGTGCCCCAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAASRVF*WCPRGC
Trigger: ACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGC...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGTGAGCGTCGGGGGTaGTGCGGAAAGGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: GETEANCAFLGLLLLSTLSERRG*CGKATS
Trigger: GGAGGTGGCCTTTCCGCACCACCCCCGACGCTCACT...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGTCCAGAGTCTTCTGCTaGTGCCCCAGAGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: QALVSHRREPRPPSRRQGSRVFC*CPRGCI
Trigger: GATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGA...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAGGGAGCCTGGTGCTTaGCAGTCACCCCACAGGCAC +
Preference number: 2 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPREPGA*QSPHRH
Trigger: GTGCCTGTGGGGTGACTGCCAAGCACCAGGCTCCCT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAACTGTGCTGTCTGGCTaGTCATGGAACCTCCGGCCG +
Preference number: 2 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPTVLSG*SWNLRP
Trigger: CGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGGGCCACCTCCCCTTGTaGTGGCTTCTCTGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLGHLPL*WLLCAF
Trigger: GAAAGCACAGAGAAGCCACCACAAGGGGAGGTGGCC...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCAGGGGCAGGGAACTaGCTTGGGACCCCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPPGAGN*LGTPCS
Trigger: TGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGG...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR TCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACAGTCACTGCAGAAGTaGCGCCGCTGGCCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGQSLQK*RRWPVW
Trigger: CCACACAGGCCAGCGGCGTCACTTCTGCAGTGACTG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR GCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGCCTCCAGAGTCTTCTaGTGGTGCCCCAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPASRVF*WCPRGC
Trigger: ACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCCAGGGGCAGGGAACTaGCTTGGGACCCCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: TQGAGETEANCAFLGLLLPGAGN*LGTPCS
Trigger: TGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCCAGGGGCAGGGAACTaGCTTGGGACCCCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: GETEANCAFLGLLLLSTLPGAGN*LGTPCS
Trigger: TGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCATGCACCCAGGTCTTTTaGGGGAGACCAGACCAGGGG +
Preference number: 2 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPCTQVF*GRPDQG
Trigger: CCCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCA...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCTCACCCCACAGGCACTaGTCAGCCATAGAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQASPHRH*SAIEGN
Trigger: GTTCCCTTCTATGGCTGACCAGTGCCTGTGGGGTGA...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAGAGTCTTCTGCTGGTaGCCCAGAGGCTGTATCCAG +
Preference number: 2 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPRVFCW*PRGCIQ
Trigger: CTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCACTCTGGCATCCCCTaGTGCCTCCAGAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: TQGAGETEANCAFLGLLLHSGIP*CLQSLL
Trigger: CAGAAGACTCTGGAGGCAGCAGGGGATGCCAGAGTG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACACTCTGGCATCCCCTaGTGCCTCCAGAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: AGETEANCAFLGLLLLSTHSGIP*CLQSLL
Trigger: CAGAAGACTCTGGAGGCAGCAGGGGATGCCAGAGTG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGAGTCTTCTGCTGGTaGCCCAGAGGCTGTATCCAG +
Preference number: 2 (lower is better)
Translates to: GETEANCAFLGLLLLSTLRVFCW*PRGCIQ
Trigger: CTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCT...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCATCACCCCACAGGCACTaGTCAGCCATAGAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPSPHRH*SAIEGN
Trigger: GTTCCCTTCTATGGCTGACCAGTGCCTGTGGGGTGA...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGTGCACCCAGGTCTTTTaGGGGAGACCAGACCAGGGG +
Preference number: 2 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWCTQVF*GRPDQG
Trigger: CCCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCA...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTTGCTGCTCTCCACACTaGGACCTCAGGCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFCCSPH*DLRPSL
Trigger: GAGGCTGGGCCTGAGGTCTCAGTGTGGAGAGCAGCA...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR GCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTGCCTCCAGAGTCTTCTaGTGGTGCCCCAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFASRVF*WCPRGC
Trigger: ACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGC...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTTCCAGAGTCTTCTGCTaGTGCCCCAGAGGCTGTATC +
Preference number: 2 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFSRVFC*CPRGCI
Trigger: GATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGA...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTTCACCCCACAGGCACTaGTCAGCCATAGAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFSPHRH*SAIEGN
Trigger: GTTCCCTTCTATGGCTGACCAGTGCCTGTGGGGTGA...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCG +
Preference number: 2 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLRDCAV*LLMEPP
Trigger: CGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCT...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR TCA 72 bp GCACTCCTCACACGGGTAACTCCGGGGGCCTGTGAGTaGGCGTCGGGGGTGGTGCGGAAAGGCCACCTCCCC +
Preference number: 3 (lower is better)
Translates to: ALLTRVTPGACE*ASGVVRKGHLP
Trigger: GGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTTACCCGTGTGAGGAGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR GCA 72 bp TCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGAACCTCCGGCCGGTGG +
Preference number: 3 (lower is better)
Translates to: SRPREHRGPEGL*CLAAHGTSGRW
Trigger: CCACCGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR CCA 72 bp CCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCGGCCGGTGGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: PENTEAPRDCAV*LLMEPPAGGPC
Trigger: GCAAGGGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR TCA 72 bp ACCCGCACTCCTCACACGGGTAACTCCGGGGGCCTGTaGGTGAGCGTCGGGGGTGGTGCGGAAAGGCCACCT +
Preference number: 3 (lower is better)
Translates to: TRTPHTGNSGGL*VSVGGGAERPP
Trigger: AGGTGGCCTTTCCGCACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTTACCCGTGTGAGGAGTGCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR CAA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTGGCTTGGGACCCCTaGTTCACTCTGGCATCCCCT +
Preference number: 3 (lower is better)
Translates to: QALVSHRREPRPPSRRQGLAWDP*FTLASP
Trigger: AGGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGGGGCAGGGAACTGGCTaGGGACCCCTTGTTCACTCT +
Preference number: 3 (lower is better)
Translates to: QALVSHRREPRPPSRRQGGQGTG*GPLVHS
Trigger: AGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCC...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGGGCAGGGAACTGGCTaGGGACCCCTTGTTCACTCT +
Preference number: 3 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGGQGTG*GPLVHS
Trigger: AGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCC...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGTTGCACCCAGGTCTTTaGGGGGAGACCAGACCAGGG +
Preference number: 3 (lower is better)
Translates to: QALVSHRREPRPPSRRQGLHPGL*GETRPG
Trigger: CCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCAA...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCCTGGCTTGGGACCCCTaGTTCACTCTGGCATCCCCT +
Preference number: 3 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQALAWDP*FTLASP
Trigger: AGGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAG...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR TCA 72 bp ACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTaGGACCTCAGGCCCAGCCTCTGCACAGACGAGTGG +
Preference number: 3 (lower is better)
Translates to: TVLSWVFCCSPH*DLRPSLCTDEW
Trigger: CCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACATTGCACCCAGGTCTTTaGGGGGAGACCAGACCAGGG +
Preference number: 3 (lower is better)
Translates to: AGETEANCAFLGLLLLSTLHPGL*GETRPG
Trigger: CCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCAA...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGAAAGGCCACCTCCCCTaGTGGTGGCTTCTCTGTGCT +
Preference number: 3 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRKGHLP*WWLLCA
Trigger: AGCACAGAGAAGCCACCACAAGGGGAGGTGGCCTTT...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335841.8
3UTR-3UTR CAA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAGCAGCTCCTTTTCCTaGCACCCAGGTCTTTTGGGG +
Preference number: 3 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPSSSFS*HPGLLG
Trigger: CCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGCT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCGGGAAGGCACAGTTTTaGAACACCCACCTGAGGCAA +
Preference number: 3 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAGKAQF*NTHLRQ
Trigger: TTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCC...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAAGCAGCTCCTTTTCCTaGCACCCAGGTCTTTTGGGG +
Preference number: 3 (lower is better)
Translates to: AGETEANCAFLGLLLLSTSSSFS*HPGLLG
Trigger: CCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGCT...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR GCA 72 bp ACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTaGTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAG +
Preference number: 3 (lower is better)
Translates to: THTGSRRNGSQL*FPGSSAALHTE
Trigger: CTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
3UTR-3UTR CAA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAGGGAAGGCACAGTTTTaGAACACCCACCTGAGGCAA +
Preference number: 3 (lower is better)
Translates to: AGETEANCAFLGLLLLSTGKAQF*NTHLRQ
Trigger: TTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCC...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCCGGGGGCCTGTGAGTaGGCGTCGGGGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPPGACE*ASGVVR
Trigger: CCGCACCACCCCCGACGCTCACTCACAGGCCCCCGG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGGGCGGCTGGGCCTCTaGGCAGCCAGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLGRLGL*AARWTL
Trigger: GAGGGTCCACCTGGCTGCCCAGAGGCCCAGCCGCCC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGCGGCCTCCTCAGGACTaGCTGGCCGCTGACCGCGCA +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLRPPQD*LAADRA
Trigger: TGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAGGCCG...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGAGCGTCGGGGGTGGTaGGGAAAGGCCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLERRGW*GKATSP
Trigger: AGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCTCCCTGGGCGCACAGTaGGGGCAGGAGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPSLGAQ*GQEWQP
Trigger: GGGCTGCCACTCCTGCCCCCACTGTGCGCCCAGGGA...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGGAACCTCCGGCCGGTaGCCCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLGTSGR*PLRWMT
Trigger: GGTCATCCACCGCAAGGGCCACCGGCCGGAGGTTCC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR TCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCCCGGGGGCCTGTGAGTaGGCGTCGGGGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAPGACE*ASGVVR
Trigger: CCGCACCACCCCCGACGCTCACTCACAGGCCCCCGG...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCCGGGGGCCTGTGAGTaGGCGTCGGGGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLPGACE*ASGVVR
Trigger: CCGCACCACCCCCGACGCTCACTCACAGGCCCCCGG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCGGCGACGCCGCGCTaGCCAATCTCTCGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGPATPR*PISRLH
Trigger: GTGCAGGCGAGAGATTGGTCAGCGCGGCGTCGCCGG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGGCCTCCTCAGGACTaGCTGGCCGCTGACCGCGCA +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGRPPQD*LAADRA
Trigger: TGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAGGCCG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCGGCCTCCTCAGGACTaGCTGGCCGCTGACCGCGCA +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGRPPQD*LAADRA
Trigger: TGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAGGCCG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGTCCCTGGGCGCACAGTaGGGGCAGGAGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGSLGAQ*GQEWQP
Trigger: GGGCTGCCACTCCTGCCCCCACTGTGCGCCCAGGGA...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGGGCTGAGTGGGCACTaGCGGTGTCCCTGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGGLSGH*RCPWAH
Trigger: GTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCC...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGCAGGTGTGGGCTGAGTaGGCACTGGCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLQVWAE*ALAVSL
Trigger: CAGGGACACCGCCAGTGCCCACTCAGCCCACACCTG...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGCTGCGACTTCCAGCTaGAGCTGCACCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLAATSS*SCTRTP
Trigger: AGGAGTGCGGGTGCAGCTTCAGCTGGAAGTCGCAGC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGGCGACCGTGACCCGCTaGCCCGCATTTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGATVTR*PAFAAA
Trigger: GGCTGCTGCAAATGCGGGTCAGCGGGTCACGGTCGC...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGCTAGCCCCGGGGACTaGACACCTGGCCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGASPGD*TPGPLV
Trigger: CACGAGTGGGCCAGGTGTGCAGTCCCCGGGGCTAGC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGAGCGTCGGGGGTGGTaGGGAAAGGCCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGERRGW*GKATSP
Trigger: AGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCTCCTCAGGACTGCCTaGCCGCTGACCGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGLLRTA*PLTAHP
Trigger: TGGGTGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTCCTCAGGACTGCCTaGCCGCTGACCGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGLLRTA*PLTAHP
Trigger: TGGGTGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGACTGTCCCTGAGGGGTaGGGGCTCCCAAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLTVPEG*GLPSGS
Trigger: GGAACCACTTGGGAGCCCCCACCCCTCAGGGACAGT...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGGGGCGGCTGGGCCTCTaGGCAGCCAGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLGRLGL*AARWTL
Trigger: GAGGGTCCACCTGGCTGCCCAGAGGCCCAGCCGCCC...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCAGGTGTGGGCTGAGTaGGCACTGGCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPQVWAE*ALAVSL
Trigger: CAGGGACACCGCCAGTGCCCACTCAGCCCACACCTG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCAGGGCTTCCTGGGGGTaGCAGCCGGCTCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGRASWG*QPAPVS
Trigger: CGAGACTGGAGCCGGCTGCCACCCCCAGGAAGCCCT...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGCCTGTGCCTCTGGCTaGTGGGGCGGTAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGACASG*WGGNPR
Trigger: CCTGGGGTTACCGCCCCACCAGCCAGAGGCACAGGC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR TCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCAGACGCCTGTCCCCGTaGGCAGCATCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGRRLSP*AASPAL
Trigger: CAGAGCTGGGGATGCTGCTCACGGGGACAGGCGTCT...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGAGACGCCTGTCCCCGTaGGCAGCATCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGRRLSP*AASPAL
Trigger: CAGAGCTGGGGATGCTGCTCACGGGGACAGGCGTCT...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTCTGCAGGTGTGGGCTaGGTGGGCACTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGSAGVG*VGTGGV
Trigger: GACACCGCCAGTGCCCACTCAGCCCACACCTGCAGA...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGCCGGGGGCCTGTGAGTaGGCGTCGGGGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRPGACE*ASGVVR
Trigger: CCGCACCACCCCCGACGCTCACTCACAGGCCCCCGG...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCAGTCACTGCAGAAGTaGCGCCGCTGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPQSLQK*RRWPVW
Trigger: CCACACAGGCCAGCGGCGTCACTTCTGCAGTGACTG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR TCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGATTTGCAGCAGCCTCTaGCGCCTGAGAGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLICSSL*RLRGAL
Trigger: CAGAGCGCCTCTCAGGCGTCAGAGGCTGCTGCAAAT...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGTGGAGGGCTGGAGGGTaGCACTTCCTGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLWRAGG*HFLSID
Trigger: GTCGATGGACAGGAAGTGGCACCCTCCAGCCCTCCA...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCTCAGGGGACTGTGCTaGAAGTGGAGGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPLRGLC*KWRAGG
Trigger: CCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCCCCTCAGGGGACTGTaGTGCAAGTGGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPPLRGL*CKWRAG
Trigger: TCCAGCCCTCCACTTGCAGCACAGTCCCCTGAGGGG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGCGGCCACAGTCACTaGAGAAGTGACGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGRGHSH*RSDAAG
Trigger: GCCAGCGGCGTCACTTCTGCAGTGACTGTGGCCGCG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR GCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCTCAGGCCCAGCCTCTaGACAGACGAGTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPLRPSL*TDEWEG
Trigger: GCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCGTCGGGGGTGGTGCGGAAAGGCCACCTCCCCTTGTGGTGGCTTCTCTGTGTCGTCAAGATGGGCCTaGACGGGCCTGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: ERRGWCGKATSPCGGFSVSSRWA*TGLRDQ
Trigger: CTGGTCTCTCAGGCCCGTCCAGGCCCATCTTGACGA...CACAGAGAAGCCACCACAAGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335841.8
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCACTGTCCCTGAGGGGTaGGGGCTCCCAAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPTVPEG*GLPSGS
Trigger: GGAACCACTTGGGAGCCCCCACCCCTCAGGGACAGT...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGCTGCAAGTGGAGGGCTaGAGGGTGCCACTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLLQVEG*RVPLPV
Trigger: GACAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAG...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCACTGGCGGTGTCCCTaGGCGCACAGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLHWRCP*AHSGGR
Trigger: CCTGCCCCCACTGTGCGCCCAGGGACACCGCCAGTG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGACGTGTAGGGCTTCCTaGGGGTGGCAGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGTCRAS*GWQPAP
Trigger: TGGAGCCGGCTGCCACCCCCAGGAAGCCCTACACGT...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCGGGGACTGCACACCTaGCCCACTCGTGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGRGLHT*PTRVCP
Trigger: CGGACACACACGAGTGGGCCAGGTGTGCAGTCCCCG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCAGTGAGCGTCGGGGGTaGTGCGGAAAGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGSERRG*CGKATS
Trigger: GGAGGTGGCCTTTCCGCACCACCCCCGACGCTCACT...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCTGTCTGGCTGCTCATaGAACCTCCGGCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGLSGCS*NLRPVA
Trigger: GGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGCCAGGGGCAGGGAACTaGCTTGGGACCCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLPGAGN*LGTPCS
Trigger: TGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGG...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCCCGGAGCGGTTGCTTaGAGGCCGCTTCCCGGATGT +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGPGAVA*RPLPGC
Trigger: ACATCCGGGAAGCGGCCTCCAAGCAACCGCTCCGGG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCGCCGCTTCCCGGATGTaGCGCCGCACAACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTAASRM*RRTTRG
Trigger: GCCCCGCGTTGTGCGGCGCCACATCCGGGAAGCGGC...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCAGTCACTGCAGAAGTaGCGCCGCTGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGQSLQK*RRWPVW
Trigger: CCACACAGGCCAGCGGCGTCACTTCTGCAGTGACTG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR TCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCTGCTGCTCTCCACACTaGGACCTCAGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGCCSPH*DLRPSL
Trigger: GAGGCTGGGCCTGAGGTCTCAGTGTGGAGAGCAGCA...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCGGCCTCCTCAGGACTaGCTGGCCGCTGACCGCGCA +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTRPPQD*LAADRA
Trigger: TGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAGGCCG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCCCCTCAGGGGACTGTaGTGCAAGTGGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGPLRGL*CKWRAG
Trigger: TCCAGCCCTCCACTTGCAGCACAGTCCCCTGAGGGG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCGCTAGCCCCGGGGACTaGACACCTGGCCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAASPGD*TPGPLV
Trigger: CACGAGTGGGCCAGGTGTGCAGTCCCCGGGGCTAGC...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGGPEGL*CLAAHG
Trigger: TCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCGGGACCCAGAGGGGATaGCATTCTTGCTCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPGTQRG*HSCSRG
Trigger: CCCCCTTGAGCAAGAATGCCATCCCCTCTGGGTCCC...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCCGCGCACCCAGGCCTaGATCTCGGGAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLPRTQA*ISGGSV
Trigger: CACACTGCCTCCCGAGATCCAGGCCTGGGTGCGCGG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGACTGTCCCTGAGGGGTaGGGGCTCCCAAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGTVPEG*GLPSGS
Trigger: GGAACCACTTGGGAGCCCCCACCCCTCAGGGACAGT...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGATCCCCAGCTCTGACTaGGCCTGTGCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGIPSSD*ACASGW
Trigger: CCAGCCAGAGGCACAGGCCCAGTCAGAGCTGGGGAT...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGGGCGGCTGGGCCTCTaGGCAGCCAGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRGRLGL*AARWTL
Trigger: GAGGGTCCACCTGGCTGCCCAGAGGCCCAGCCGCCC...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACTCCCTGGGCGCACAGTaGGGGCAGGAGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNSLGAQ*GQEWQP
Trigger: GGGCTGCCACTCCTGCCCCCACTGTGCGCCCAGGGA...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACACTGGCGGTGTCCCTaGGCGCACAGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPHWRCP*AHSGGR
Trigger: CCTGCCCCCACTGTGCGCCCAGGGACACCGCCAGTG...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACGGGCTGAGTGGGCACTaGCGGTGTCCCTGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNGLSGH*RCPWAH
Trigger: GTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCC...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGGCTTCCTGGGGGTaGCAGCCGGCTCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLRASWG*QPAPVS
Trigger: CGAGACTGGAGCCGGCTGCCACCCCCAGGAAGCCCT...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCGTCGGGGGTGGTGCGGAAAGGCCACCTCCCCTTGTGGTGGCTTCTCTGTGAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: ERRGWCGKATSPCGGFSVRDCAV*LLMEPP
Trigger: CGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCT...CACAGAGAAGCCACCACAAGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335841.8
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCTGCACCCAGGTCTTTTaGGGGAGACCAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPCTQVF*GRPDQG
Trigger: CCCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCA...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCAGGGAGCCTGGTGCTTaGCAGTCACCCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGREPGA*QSPHRH
Trigger: GTGCCTGTGGGGTGACTGCCAAGCACCAGGCTCCCT...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGGTGGGAGCCTAGGTTaGGGGCCACTGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLGGSLG*GPLISH
Trigger: ATGACTGATCAGTGGCCCCCAACCTAGGCTCCCACC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGCTCCAGCTGTTCCCGTaGCAACGTTCAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLLQLFP*QRSGAL
Trigger: CAACGCTCCTGAACGTTGCCACGGGAACAGCTGGAG...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGGGCCTGGACGGGCCTaGGAGACCAGGCCTGACACC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRGPGRA*ETRPDT
Trigger: GGTGTCAGGCCTGGTCTCTCAGGCCCGTCCAGGCCC...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGGGCCTGGACGGGCCTaGGAGACCAGGCCTGACACC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPGPGRA*ETRPDT
Trigger: GGTGTCAGGCCTGGTCTCTCAGGCCCGTCCAGGCCC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCAGACGCCTGTCCCCGTaGGCAGCATCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQARRLSP*AASPAL
Trigger: CAGAGCTGGGGATGCTGCTCACGGGGACAGGCGTCT...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCTCTGCAGGTGTGGGCTaGGTGGGCACTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQASAGVG*VGTGGV
Trigger: GACACCGCCAGTGCCCACTCAGCCCACACCTGCAGA...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGTCTGCAGGTGTGGGCTaGGTGGGCACTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLSAGVG*VGTGGV
Trigger: GACACCGCCAGTGCCCACTCAGCCCACACCTGCAGA...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACAACTCCGGGGGCCTGTaGGTGAGCGTCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNNSGGL*VSVGGG
Trigger: ACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAACTCCGGGGGCCTGTaGGTGAGCGTCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPNSGGL*VSVGGG
Trigger: ACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGACAGGCGCGACCGTaGCCCGCTGACCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLRQARP*PADPHL
Trigger: CAAATGCGGGTCAGCGGGTCACGGTCGCGCCTGTCT...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACGGCCTCCTCAGGACTaGCTGGCCGCTGACCGCGCA +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPRPPQD*LAADRA
Trigger: TGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAGGCCG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGCAGGGAGCACCTCCTaGTTCAGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGAGSTS*FRTWAV
Trigger: CACAGCCCATGTCCTGAAGCAGGAGGTGCTCCCTGC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCTCCAGTCTCGTCTCTaGAGGTGTGGGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGLQSRL*RCGLSG
Trigger: CCCACTCAGCCCACACCTGCAGAGACGAGACTGGAG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACGAGCGTCGGGGGTGGTaGGGAAAGGCCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNERRGW*GKATSP
Trigger: AGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCACTGTGCTGTCTGGCTaGTCATGGAACCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGTVLSG*SWNLRP
Trigger: CGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGT...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGAGAGTCTTCTGCTGGTaGCCCAGAGGCTGTATCCAG +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLRVFCW*PRGCIQ
Trigger: CTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCT...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACCTCCTCAGGACTGCCTaGCCGCTGACCGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNLLRTA*PLTAHP
Trigger: TGGGTGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAG...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCTCCTCAGGACTGCCTaGCCGCTGACCGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTLLRTA*PLTAHP
Trigger: TGGGTGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCGTCGGGGGTGGTGCGGAAAGGCCACCTCCCCTTGTGGTGGCTTCTCTGTGTCCTGCTTCAGGACATaGGCTGTGATCCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: ERRGWCGKATSPCGGFSVSCFRT*AVIQPN
Trigger: GTTGGGCTGGATCACAGCCCATGTCCTGAAGCAGGA...CACAGAGAAGCCACCACAAGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335841.8
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGTGGAGGCTGGTTCTTaGTGTCCATGGTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLVEAGS*CPWFPS
Trigger: TGAGGGGAACCATGGACACCAAGAACCAGCCTCCAC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTGTGCCTCTGGCTGGTaGGGCGGTAACCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGCASGW*GGNPES
Trigger: GGATTCAGGGTTACCGCCCCACCAGCCAGAGGCACA...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335841.8
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCTCTGGGCAGCCAGGTaGACCCTCACTCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPLWAAR*TLTLIS
Trigger: GGAAATGAGAGTGAGGGTCCACCTGGCTGCCCAGAG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTCCCTGGGCGCACAGTaGGGGCAGGAGTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLSLGAQ*GQEWQP
Trigger: GGGCTGCCACTCCTGCCCCCACTGTGCGCCCAGGGA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGGCGGTGTCCCTaGGCGCACAGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPHWRCP*AHSGGR
Trigger: CCTGCCCCCACTGTGCGCCCAGGGACACCGCCAGTG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCACTGGCGGTGTCCCTaGGCGCACAGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLHWRCP*AHSGGR
Trigger: CCTGCCCCCACTGTGCGCCCAGGGACACCGCCAGTG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGGGCTGAGTGGGCACTaGCGGTGTCCCTGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRGLSGH*RCPWAH
Trigger: GTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCC...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACAGGGCTTCCTGGGGGTaGCAGCCGGCTCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNRASWG*QPAPVS
Trigger: CGAGACTGGAGCCGGCTGCCACCCCCAGGAAGCCCT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCCGGGGACTGCACACCTaGCCCACTCGTGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQARGLHT*PTRVCP
Trigger: CGGACACACACGAGTGGGCCAGGTGTGCAGTCCCCG...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCAGTGAGCGTCGGGGGTaGTGCGGAAAGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQASERRG*CGKATS
Trigger: GGAGGTGGCCTTTCCGCACCACCCCCGACGCTCACT...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACGGAACCTCCGGCCGGTaGCCCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNGTSGR*PLRWMT
Trigger: GGTCATCCACCGCAAGGGCCACCGGCCGGAGGTTCC...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCTGTCTGGCTGCTCATaGAACCTCCGGCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLLSGCS*NLRPVA
Trigger: GGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPRDCAV*LLMEPP
Trigger: CGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCT...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGTCCAGAGTCTTCTGCTaGTGCCCCAGAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLSRVFC*CPRGCI
Trigger: GATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGA...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCTGCACCCAGGTCTTTTaGGGGAGACCAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGCTQVF*GRPDQG
Trigger: CCCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCA...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTGCACCCAGGTCTTTTaGGGGAGACCAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGCTQVF*GRPDQG
Trigger: CCCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCA...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCGCCTGTGCCTCTGGCTaGTGGGGCGGTAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTACASG*WGGNPR
Trigger: CCTGGGGTTACCGCCCCACCAGCCAGAGGCACAGGC...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCATGGAGGGAGGCGGCTaGTGGGAAGACAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGMEGGG*WEDKVG
Trigger: CCCTACCTTGTCTTCCCACCAGCCGCCTCCCTCCAT...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGAAGTGGCGGCCCAGTaGTTTCCTAGGTCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLEVAAQ*FPRSSS
Trigger: ACTACTCGACCTAGGAAACCACTGGGCCGCCACTTC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGCCTGGACGGGCCTaGGAGACCAGGCCTGACACC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGGPGRA*ETRPDT
Trigger: GGTGTCAGGCCTGGTCTCTCAGGCCCGTCCAGGCCC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCTTCACACTGCAGCTaGGCTGGACAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGPSHCS*AGQTPL
Trigger: TAGAGGGGTCTGTCCAGCTCAGCTGCAGTGTGAAGG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAGACGCCTGTCCCCGTaGGCAGCATCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPRRLSP*AASPAL
Trigger: CAGAGCTGGGGATGCTGCTCACGGGGACAGGCGTCT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGGTGGATGACGAACACTaGCTTCCAGTCGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGVDDEH*LPVEAA
Trigger: CGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCAC...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGTGGATGACGAACACTaGCTTCCAGTCGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGVDDEH*LPVEAA
Trigger: CGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCAC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAAACTCCGGGGGCCTGTaGGTGAGCGTCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTNSGGL*VSVGGG
Trigger: ACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTT...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGAACTCCGGGGGCCTGTaGGTGAGCGTCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRNSGGL*VSVGGG
Trigger: ACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTT...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAAACTCCGGGGGCCTGTaGGTGAGCGTCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPNSGGL*VSVGGG
Trigger: ACCACCCCCGACGCTCACTCACAGGCCCCCGGAGTT...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGTGCTGCTCTCCACACTaGGACCTCAGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLCCSPH*DLRPSL
Trigger: GAGGCTGGGCCTGAGGTCTCAGTGTGGAGAGCAGCA...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCAGCCCCCACTCCTCCTaGATCCTGGGTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQASPHSS*ILGGWK
Trigger: CTTCCACCCACCCAGGATTCAGGAGGAGTGGGGGCT...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR GCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGTGCCCAGGGTCATGCTaGAGTCCTTCGACTAGGGCA +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGCPGSC*SPSTRA
Trigger: TGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCA...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCTCAGGGGACTGTGCTaGAAGTGGAGGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLLRGLC*KWRAGG
Trigger: CCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGGCTAGCCCCGGGGACTaGACACCTGGCCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLASPGD*TPGPLV
Trigger: CACGAGTGGGCCAGGTGTGCAGTCCCCGGGGCTAGC...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAGCTAGCCCCGGGGACTaGACACCTGGCCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTASPGD*TPGPLV
Trigger: CACGAGTGGGCCAGGTGTGCAGTCCCCGGGGCTAGC...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAGAGCGTCGGGGGTGGTaGGGAAAGGCCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTERRGW*GKATSP
Trigger: AGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCACTCTGGCATCCCCTaGTGCCTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGHSGIP*CLQSLL
Trigger: CAGAAGACTCTGGAGGCAGCAGGGGATGCCAGAGTG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCAACGTTCAGGAGCGTTaGCTCGACTTCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPNVQER*LDFRRG
Trigger: GCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTT...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACCGCGCACCCAGGCCTaGATCTCGGGAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPPRTQA*ISGGSV
Trigger: CACACTGCCTCCCGAGATCCAGGCCTGGGTGCGCGG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCTCCTCAGGACTGCCTaGCCGCTGACCGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLLLRTA*PLTAHP
Trigger: TGGGTGCGCGGTCAGCGGCCAGGCAGTCCTGAGGAG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCAGACCCCTCTATTCTaGTGTCCTGGGGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGQTPLF*CPGDLP
Trigger: GGGAAGGTCCCCAGGACACCAGAATAGAGGGGTCTG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGACACTGCAGCTGAGCTaGACAGACCCCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLTLQLS*TDPSIL
Trigger: CAGAATAGAGGGGTCTGTCCAGCTCAGCTGCAGTGT...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCGGTAACCCTGAATCCTaGGTGGGTGGAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPGNPES*VGGRMW
Trigger: CCACATCCTTCCACCCACCCAGGATTCAGGGTTACC...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335841.8
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAAGGGCTTCCTGGGGGTaGCAGCCGGCTCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTRASWG*QPAPVS
Trigger: CGAGACTGGAGCCGGCTGCCACCCCCAGGAAGCCCT...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAAGGGCTTCCTGGGGGTaGCAGCCGGCTCCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPRASWG*QPAPVS
Trigger: CGAGACTGGAGCCGGCTGCCACCCCCAGGAAGCCCT...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCACGTGTAGGGCTTCCTaGGGGTGGCAGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTTCRAS*GWQPAP
Trigger: TGGAGCCGGCTGCCACCCCCAGGAAGCCCTACACGT...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACGTGTAGGGCTTCCTaGGGGTGGCAGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNTCRAS*GWQPAP
Trigger: TGGAGCCGGCTGCCACCCCCAGGAAGCCCTACACGT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGTGTGTGTCCGGTGGTaGATGACGAACACTGACTTC +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLVCVRW*MTNTDF
Trigger: GAAGTCAGTGTTCGTCATCCACCACCGGACACACAC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCGGGGACTGCACACCTaGCCCACTCGTGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTRGLHT*PTRVCP
Trigger: CGGACACACACGAGTGGGCCAGGTGTGCAGTCCCCG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGGCCACCTCCCCTTGTaGTGGCTTCTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGGHLPL*WLLCAF
Trigger: GAAAGCACAGAGAAGCCACCACAAGGGGAGGTGGCC...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGGGAACCTCCGGCCGGTaGCCCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLGTSGR*PLRWMT
Trigger: GGTCATCCACCGCAAGGGCCACCGGCCGGAGGTTCC...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCTCCAGAGTCTTCTGCTaGTGCCCCAGAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPSRVFC*CPRGCI
Trigger: GATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGA...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCAGGGAGCCTGGTGCTTaGCAGTCACCCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAREPGA*QSPHRH
Trigger: GTGCCTGTGGGGTGACTGCCAAGCACCAGGCTCCCT...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCCCTGCTGCCTGCTCTaGATGAAGAGCAGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPPCCLL*MKSSGL
Trigger: AAGACCACTGCTCTTCATCCAGAGCAGGCAGCAGGG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCGGACTCGCTTCCAAGTaGACCCGGGAGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTGLASK*TRERRW
Trigger: CCACCGCCTCTCCCGGGTCCACTTGGAAGCGAGTCC...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGTGTCCGGTGGTGGATaGCGAACACTGACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGVSGGG*RTLTSS
Trigger: ACTGGAAGTCAGTGTTCGTCATCCACCACCGGACAC...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGCTGCGACTTCCAGCTaGAGCTGCACCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPAATSS*SCTRTP
Trigger: AGGAGTGCGGGTGCAGCTTCAGCTGGAAGTCGCAGC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACTGCTGCTCTCCACACTaGGACCTCAGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNCCSPH*DLRPSL
Trigger: GAGGCTGGGCCTGAGGTCTCAGTGTGGAGAGCAGCA...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACAGCCCCCACTCCTCCTaGATCCTGGGTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNSPHSS*ILGGWK
Trigger: CTTCCACCCACCCAGGATTCAGGAGGAGTGGGGGCT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGCAGCCTCTGACGCCTaGGAGGCGCTCTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPAASDA*EALCSS
Trigger: AGAGGAACAGAGCGCCTCTCAGGCGTCAGAGGCTGC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGGCCTATCCGAGGGATaGTCGAACTTCGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGGLSEG*SNFGIC
Trigger: ACAGATCCCGAAGTTCGAGCATCCCTCGGATAGGCC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000622313.4
CDS-3UTR GCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCAGTTGCCCAGGGTCATaGTGCAGTCCTTCGACTAGG +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGSCPGS*CSPSTR
Trigger: CCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACT...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGTGGAGGGCTGGAGGGTaGCACTTCCTGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLWRAGG*HFLSID
Trigger: GTCGATGGACAGGAAGTGGCACCCTCCAGCCCTCCA...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCTCAGGGGACTGTGCTaGAAGTGGAGGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTLRGLC*KWRAGG
Trigger: CCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACTCAGGGGACTGTGCTaGAAGTGGAGGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPLRGLC*KWRAGG
Trigger: CCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAG...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGGCCTCCAGAGTCTTCTaGTGGTGCCCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLASRVF*WCPRGC
Trigger: ACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGC...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGAACGGAAGCCAACTGTaGTTTCCTGGGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLNGSQL*FPGSSA
Trigger: AGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTT...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAATCAGAGGTGGCGCTTaGTTGGCCCCGCCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGIRGGA*LAPPPP
Trigger: TGGGGGCGGCGGGGCCAAGCAAGCGCCACCTCTGAT...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCGGGACCCAGAGGGGATaGCATTCTTGCTCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAGTQRG*HSCSRG
Trigger: CCCCCTTGAGCAAGAATGCCATCCCCTCTGGGTCCC...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCTCAAGGGTGGTCTCTaGGTCCATGACGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLLKGGL*VHDGQA
Trigger: TGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAACTGTCCCTGAGGGGTaGGGGCTCCCAAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPTVPEG*GLPSGS
Trigger: GGAACCACTTGGGAGCCCCCACCCCTCAGGGACAGT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCCTGTCCATCGACATTaGGCTCCTCCTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGPVHRH*APPSHC
Trigger: GCAGTGTGAAGGAGGAGCCCAATGTCGATGGACAGG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGGTTCTTGGTGTCCATaGTTCCCCTCAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGGSWCP*FPSGDC
Trigger: ACAGTCCCCTGAGGGGAACCATGGACACCAAGAACC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGCCTGTGCCTCTGGCTaGTGGGGCGGTAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPACASG*WGGNPE
Trigger: TTCAGGGTTACCGCCCCACCAGCCAGAGGCACAGGC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335841.8
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACATCCCCAGCTCTGACTaGGCCTGTGCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNIPSSD*ACASGW
Trigger: CCAGCCAGAGGCACAGGCCCAGTCAGAGCTGGGGAT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGGGCGGCTGGGCCTCTaGGCAGCCAGGTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWGRLGL*AARWTL
Trigger: GAGGGTCCACCTGGCTGCCCAGAGGCCCAGCCGCCC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCAGTGGGGGCAGGAGTaGCAGCCCCAGACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLQWGQE*QPQTSP
Trigger: AGGGCTTGTCTGGGGCTGCCACTCCTGCCCCCACTG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACAGTGGGGGCAGGAGTaGCAGCCCCAGACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTQWGQE*QPQTSP
Trigger: AGGGCTTGTCTGGGGCTGCCACTCCTGCCCCCACTG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCAGGTGTGGGCTGAGTaGGCACTGGCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLQVWAE*ALAVSL
Trigger: CAGGGACACCGCCAGTGCCCACTCAGCCCACACCTG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCAGGTGTGGGCTGAGTaGGCACTGGCGGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLQVWAE*ALAVSL
Trigger: CAGGGACACCGCCAGTGCCCACTCAGCCCACACCTG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGACGTGTAGGGCTTCCTaGGGGTGGCAGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLTCRAS*GWQPAP
Trigger: TGGAGCCGGCTGCCACCCCCAGGAAGCCCTACACGT...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCTCGTGTGTGTCCGGTaGTGGATGACGAACACTGAC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGLVCVR*WMTNTD
Trigger: GTCAGTGTTCGTCATCCACCACCGGACACACACGAG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCTCGTGTGTGTCCGGTaGTGGATGACGAACACTGAC +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGLVCVR*WMTNTD
Trigger: GTCAGTGTTCGTCATCCACCACCGGACACACACGAG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACGGGGACTGCACACCTaGCCCACTCGTGTGTGTCCG +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTRGLHT*PTRVCP
Trigger: CGGACACACACGAGTGGGCCAGGTGTGCAGTCCCCG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAAGTGAGCGTCGGGGGTaGTGCGGAAAGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPSERRG*CGKATS
Trigger: GGAGGTGGCCTTTCCGCACCACCCCCGACGCTCACT...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAAGTGAGCGTCGGGGGTaGTGCGGAAAGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTSERRG*CGKATS
Trigger: GGAGGTGGCCTTTCCGCACCACCCCCGACGCTCACT...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGCGCCGCTGGCCTGTGTaGCTCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRRRWPV*LLRWMT
Trigger: GGTCATCCACCGCAAGAGCCACACAGGCCAGCGGCG...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACGCCGCTGGCCTGTGTaGCTCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPRRWPV*LLRWMT
Trigger: GGTCATCCACCGCAAGAGCCACACAGGCCAGCGGCG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACGCCGCTGGCCTGTGTaGCTCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTRRWPV*LLRWMT
Trigger: GGTCATCCACCGCAAGAGCCACACAGGCCAGCGGCG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGAACCTCCGGCCGGTaGCCCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGGTSGR*PLRWMT
Trigger: GGTCATCCACCGCAAGGGCCACCGGCCGGAGGTTCC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTGTGCCTCTGGCTGGTaGGGCGGTAACCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLCASGW*GGNPRE
Trigger: CTCCCTGGGGTTACCGCCCCACCAGCCAGAGGCACA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGTGTGCCTCTGGCTGGTaGGGCGGTAACCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLCASGW*GGNPRE
Trigger: CTCCCTGGGGTTACCGCCCCACCAGCCAGAGGCACA...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAGGAACCTCCGGCCGGTaGCTCTTGCGGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTGTSGR*LLRWMT
Trigger: GGTCATCCACCGCAAGAGCCACCGGCCGGAGGTTCC...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610298.1
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACCTGTCTGGCTGCTCATaGAACCTCCGGCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNLSGCS*NLRPVA
Trigger: AGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAG...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610298.1
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCTACTGGGATTCTGGTaGCCCAAGTCTTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGLLGFW*PKSCRL
Trigger: GAGCCTGCAAGACTTGGGCCACCAGAATCCCAGTAG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCGCTCTGCAGACTTACTaGGGGACAATGGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPALQTY*GTMVQG
Trigger: TCCCTGAACCATTGTCCCCCAGTAAGTCTGCAGAGC...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCGCCACTGATCAGTCATaGGTTTGGGGAGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPATDQS*VWGGED
Trigger: ATCTTCCCCTCCCCAAACCCATGACTGATCAGTGGC...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGGTCGAGTAGTTCGCTaGGACTCGCTTCCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGGRVVR*DSLPSG
Trigger: TCCACTTGGAAGCGAGTCCCAGCGAACTACTCGACC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCTGGGCCGGTTTCTATTaGCAGGTGAGGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAWAGFY*QVRGGG
Trigger: ACCCCCTCCCCTCACCTGCCAATAGAAACCGGCCCA...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCGTGGATGACGAACACTaGCTTCCAGTCGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAVDDEH*LPVEAA
Trigger: CGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCAC...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGCTGCGACTTCCAGCTaGAGCTGCACCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPAATSS*SCTRTP
Trigger: AGGAGTGCGGGTGCAGCTTCAGCTGGAAGTCGCAGC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACATGCTGCTCTCCACACTaGGACCTCAGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTCCSPH*DLRPSL
Trigger: GAGGCTGGGCCTGAGGTCTCAGTGTGGAGAGCAGCA...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGTACAGTTCCTTCTGTaGCCGGTCCAGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPVQFLL*PVQQPP
Trigger: TGGGGGCTGCTGGACCGGTCACAGAAGGAACTGTAC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR TCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGTGGGGCGGTAACCCCTaGATCCTGGGTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRWGGNP*ILGGWK
Trigger: CTTCCACCCACCCAGGATTCAGGGGTTACCGCCCCA...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622313.4
CDS-3UTR GCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCGCAGGGAGCACCTCCTaGTTCAGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTAGSTS*FRTWAV
Trigger: CACAGCCCATGTCCTGAAGCAGGAGGTGCTCCCTGC...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACGCAGGGAGCACCTCCTaGTTCAGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNAGSTS*FRTWAV
Trigger: CACAGCCCATGTCCTGAAGCAGGAGGTGCTCCCTGC...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCTCAGGGGACTGTGCTaGAAGTGGAGGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLLRGLC*KWRAGG
Trigger: CCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACTCCAGTCTCGTCTCTaGAGGTGTGGGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPLQSRL*RCGLSG
Trigger: CCCACTCAGCCCACACCTGCAGAGACGAGACTGGAG...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACGCGGCCACAGTCACTaGAGAAGTGACGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGRGHSH*RSDAAG
Trigger: GCCAGCGGCGTCACTTCTGCAGTGACTGTGGCCGCG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPGPEGL*CLAAHG
Trigger: TCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCAGGCCCAGCCTCTaGACAGACGAGTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLLRPSL*TDEWEG
Trigger: GCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGCTCAGGCCCAGCCTCTaGACAGACGAGTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRLRPSL*TDEWEG
Trigger: GCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACTCAGGCCCAGCCTCTaGACAGACGAGTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPLRPSL*TDEWEG
Trigger: GCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTCAGGCCCAGCCTCTaGACAGACGAGTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTLRPSL*TDEWEG
Trigger: GCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGATCAACCCGGAGCGGTTaGTTGGAGGCCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGSTRSG*LEAASR
Trigger: CCGGGAAGCGGCCTCCAAGCAACCGCTCCGGGTTGA...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACTCGTCAAGATGGGCCTaGACGGGCCTGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNSSRWA*TGLRDQ
Trigger: CTGGTCTCTCAGGCCCGTCCAGGCCCATCTTGACGA...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGTCAAGGGGGTGGTCTTaGAATCGTCAAGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGSRGWS*NRQDGP
Trigger: AGGCCCATCTTGACGATTCCAAGACCACCCCCTTGA...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGGGACCCAGAGGGGATaGCATTCTTGCTCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPGTQRG*HSCSRG
Trigger: CCCCCTTGAGCAAGAATGCCATCCCCTCTGGGTCCC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCTCAAGGGTGGTCTCTaGGTCCATGACGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTLKGGL*VHDGQA
Trigger: TGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACCTCAAGGGTGGTCTCTaGGTCCATGACGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNLKGGL*VHDGQA
Trigger: TGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAG...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGACTGTCCCTGAGGGGTaGGGGCTCCCAAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLTVPEG*GLPSGS
Trigger: GGAACCACTTGGGAGCCCCCACCCCTCAGGGACAGT...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGTCTATTCTGGTGTCCTaGGGACCTTCCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLSILVS*GPSPGD
Trigger: GTCCCCTGGGGAAGGTCCCCAGGACACCAGAATAGA...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCAGACCCCTCTATTCTaGTGTCCTGGGGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLQTPLF*CPGDLP
Trigger: GGGAAGGTCCCCAGGACACCAGAATAGAGGGGTCTG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGACACTGCAGCTGAGCTaGACAGACCCCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGTLQLS*TDPSIL
Trigger: CAGAATAGAGGGGTCTGTCCAGCTCAGCTGCAGTGT...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAATCCCCAGCTCTGACTaGGCCTGTGCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTIPSSD*ACASGW
Trigger: CCAGCCAGAGGCACAGGCCCAGTCAGAGCTGGGGAT...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACAGTGGGGGCAGGAGTaGCAGCCCCAGACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGQWGQE*QPQTSP
Trigger: AGGGCTTGTCTGGGGCTGCCACTCCTGCCCCCACTG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACTGTCTGGCTGCTCATaGAACCTCCGGCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGLSGCS*NLRPVA
Trigger: GGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLRDCAV*LLMEPP
Trigger: CGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCT...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCCAGGGGCAGGGAACTaGCTTGGGACCCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTPGAGN*LGTPCS
Trigger: TGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAAGGGAGCCTGGTGCTTaGCAGTCACCCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPREPGA*QSPHRH
Trigger: GTGCCTGTGGGGTGACTGCCAAGCACCAGGCTCCCT...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCAACTGTGCTTTCCTaGGTCTTCTGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QALVSHRREPRPPSRRQGPTVLS*VFCCSP
Trigger: TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCTTACTGGGGGACAATaGTTCAGGGACCTACTGGGA +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGLTGGQ*FRDLLG
Trigger: TCCCAGTAGGTCCCTGAACCATTGTCCCCCAGTAAG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCCTGGAGTCAGCCTGGTaGGAACTCTCTCCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQALESAW*ELSPLR
Trigger: GCGAAGAGGAGAGAGTTCCCACCAGGCTGACTCCAG...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCTACAAAGTCGGGGGTaGAGGTTTCCCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLLQSRG*RFPSRL
Trigger: CAGCCTGGAGGGAAACCTCCACCCCCGACTTTGTAG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTTCACACTGCAGCTaGGCTGGACAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPPSHCS*AGQTPL
Trigger: TAGAGGGGTCTGTCCAGCTCAGCTGCAGTGTGAAGG...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGATGCTGCTCTCCACACTaGGACCTCAGGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGCCSPH*DLRPSL
Trigger: GAGGCTGGGCCTGAGGTCTCAGTGTGGAGAGCAGCA...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGGTACAGTTCCTTCTGTaGCCGGTCCAGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLVQFLL*PVQQPP
Trigger: TGGGGGCTGCTGGACCGGTCACAGAAGGAACTGTAC...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAGGTACCGACGGTTGTaGCCGCAGTCTCTGACGTCT +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPRYRRL*PQSLTS
Trigger: AGACGTCAGAGACTGCGGTCACAACCGTCGGTACCT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCAGTTGCCCAGGGTCATaGTGCAGTCCTTCGACTAGG +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQASCPGS*CSPSTR
Trigger: CCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACT...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGGCAGGGAGCACCTCCTaGTTCAGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLAGSTS*FRTWAV
Trigger: CACAGCCCATGTCCTGAAGCAGGAGGTGCTCCCTGC...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCATGGAGGGCTGGAGGGTaGCACTTCCTGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPWRAGG*HFLSID
Trigger: GTCGATGGACAGGAAGTGGCACCCTCCAGCCCTCCA...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCTCCAGTCTCGTCTCTaGAGGTGTGGGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLLQSRL*RCGLSG
Trigger: CCCACTCAGCCCACACCTGCAGAGACGAGACTGGAG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGACTGTGCTGTCTGGCTaGTCATGGAACCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRTVLSG*SWNLRP
Trigger: CGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGT...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCAACGGAAGCCAACTGTaGTTTCCTGGGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGNGSQL*FPGSSA
Trigger: AGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTT...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTCGTCAAGATGGGCCTaGACGGGCCTGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLSSRWA*TGLRDQ
Trigger: CTGGTCTCTCAGGCCCGTCCAGGCCCATCTTGACGA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCTCTTGCTCAAGGGGGTaGTCTTGGAATCGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPSCSRG*SWNRQD
Trigger: ATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGA...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCAAGGGTGGTCTCTaGGTCCATGACGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLLKGGL*VHDGQA
Trigger: TGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTCAAGGGTGGTCTCTaGGTCCATGACGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTLKGGL*VHDGQA
Trigger: TGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGCCGCGCACCCAGGCCTaGATCTCGGGAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWPRTQA*ISGGSV
Trigger: CACACTGCCTCCCGAGATCCAGGCCTGGGTGCGCGG...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGTCCTGCTTCAGGACATaGGCTGTGATCCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLSCFRT*AVIQPN
Trigger: GTTGGGCTGGATCACAGCCCATGTCCTGAAGCAGGA...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCATCTATTCTGGTGTCCTaGGGACCTTCCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPSILVS*GPSPGD
Trigger: GTCCCCTGGGGAAGGTCCCCAGGACACCAGAATAGA...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCTCTATTCTGGTGTCCTaGGGACCTTCCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTSILVS*GPSPGD
Trigger: GTCCCCTGGGGAAGGTCCCCAGGACACCAGAATAGA...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGACCCCTCTATTCTaGTGTCCTGGGGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTQTPLF*CPGDLP
Trigger: GGGAAGGTCCCCAGGACACCAGAATAGAGGGGTCTG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCCTGTCCATCGACATTaGGCTCCTCCTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLPVHRH*APPSHC
Trigger: GCAGTGTGAAGGAGGAGCCCAATGTCGATGGACAGG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTGCAAGTGGAGGGCTaGAGGGTGCCACTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLLQVEG*RVPLPV
Trigger: GACAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGCTGCAAGTGGAGGGCTaGAGGGTGCCACTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRLQVEG*RVPLPV
Trigger: GACAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAG...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCGAAGGATGTGGAGGCTaGTTCTTGGTGTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGEGCGG*FLVSMV
Trigger: AACCATGGACACCAAGAACCAGCCTCCACATCCTTC...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAATCCCCAGCTCTGACTaGGCCTGTGCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGIPSSD*ACASGW
Trigger: CCAGCCAGAGGCACAGGCCCAGTCAGAGCTGGGGAT...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCTCTGGGCAGCCAGGTaGACCCTCACTCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTLWAAR*TLTLIS
Trigger: GGAAATGAGAGTGAGGGTCCACCTGGCTGCCCAGAG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACGGCCACCTCCCCTTGTaGTGGCTTCTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNGHLPL*WLLCAF
Trigger: GAAAGCACAGAGAAGCCACCACAAGGGGAGGTGGCC...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPRDCAV*LLMEPP
Trigger: CGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGACTCCTCCTGAATCCTaGGTGGGTGGAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLTPPES*VGGRMW
Trigger: CCACATCCTTCCACCCACCCAGGATTCAGGAGGAGT...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGGACCTACTGGGATTCTaGTGGCCCAAGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLDLLGF*WPKSCR
Trigger: CCTGCAAGACTTGGGCCACCAGAATCCCAGTAGGTC...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGAGGGAGGCGGCTGGTaGGAAGACAAGGTAGGGTAC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPEGGGW*EDKVGY
Trigger: GTACCCTACCTTGTCTTCCCACCAGCCGCCTCCCTC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGGGCCAAGACCTGCATaGAGGTGGGAGCCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPGPRPA*RWEPRL
Trigger: CAACCTAGGCTCCCACCTCCATGCAGGTCTTGGCCC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCCTCTGTGGTTTCAGTaGATTTCTGAGCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGPLWFQ*ISEPSE
Trigger: CTCACTGGGCTCAGAAATCCACTGAAACCACAGAGG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCAGCCTTCTGCGGTTCTaGAGTCAGCCTGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTSLLRF*SQPGGN
Trigger: GTTCCCACCAGGCTGACTCCAGAACCGCAGAAGGCT...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGACTTCCGAAGAGGCTaGAAGTGGCGGCCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRDFRRG*KWRPSG
Trigger: ACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTC...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCCTTCACACTGCAGCTaGGCTGGACAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLPSHCS*AGQTPL
Trigger: TAGAGGGGTCTGTCCAGCTCAGCTGCAGTGTGAAGG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGAGACGCCTGTCCCCGTaGGCAGCATCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWRRLSP*AASPAL
Trigger: CAGAGCTGGGGATGCTGCTCACGGGGACAGGCGTCT...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAGTGGATGACGAACACTaGCTTCCAGTCGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTVDDEH*LPVEAA
Trigger: CGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCAC...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGTGGATGACGAACACTaGCTTCCAGTCGAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPVDDEH*LPVEAA
Trigger: CGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCAC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGGGTTTCCCTCCAGGCTaGTCGGACATGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLGFPPG*SDMLNR
Trigger: ACGGTTGAGCATGTCCGATCAGCCTGGAGGGAAACC...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCATGCGAGGGCCATCTTTaGCCTCTGTTAAGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPCEGHL*PLLSAL
Trigger: TAGGGCGCTTAACAGAGGTCAAAGATGGCCCTCGCA...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCGGCCTATCCGAGGGATaGTCGAACTTCGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTGLSEG*SNFGIC
Trigger: ACAGATCCCGAAGTTCGAGCATCCCTCGGATAGGCC...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000622313.4
CDS-3UTR GCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAAGGGGATGGCATTCTTaGTCAAGGGGGTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPRGWHS*SRGWSW
Trigger: CCAAGACCACCCCCTTGAGCAAGAATGCCATCCCCT...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACATGCCCAGGGTCATGCTaGAGTCCTTCGACTAGGGCA +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTCPGSC*SPSTRA
Trigger: TGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCA...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCATGCCCAGGGTCATGCTaGAGTCCTTCGACTAGGGCA +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPCPGSC*SPSTRA
Trigger: TGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCA...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCAGTTGCCCAGGGTCATaGTGCAGTCCTTCGACTAGG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTSCPGS*CSPSTR
Trigger: CCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACT...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGATGGAGGGCTGGAGGGTaGCACTTCCTGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGWRAGG*HFLSID
Trigger: GTCGATGGACAGGAAGTGGCACCCTCCAGCCCTCCA...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACTCCAGTCTCGTCTCTaGAGGTGTGGGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGLQSRL*RCGLSG
Trigger: CCCACTCAGCCCACACCTGCAGAGACGAGACTGGAG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGCCTCCAGAGTCTTCTaGTGGTGCCCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGASRVF*WCPRGC
Trigger: ACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGCACTCTGGCATCCCCTaGTGCCTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRHSGIP*CLQSLL
Trigger: CAGAAGACTCTGGAGGCAGCAGGGGATGCCAGAGTG...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCGCAGCTCCTTTTCCTTaGACCCAGGTCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTAAPFP*TQVFWG
Trigger: CCCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGC...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGACCAATCTCTCGCCTaGACCGAAGGCACCGCCCAT +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGDQSLA*TEGTAH
Trigger: ATGGGCGGTGCCTTCGGTGCAGGCGAGAGATTGGTC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTCTTGCTCAAGGGGGTaGTCTTGGAATCGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGSCSRG*SWNRQD
Trigger: ATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGA...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCAGACCCCTCTATTCTaGTGTCCTGGGGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLQTPLF*CPGDLP
Trigger: GGGAAGGTCCCCAGGACACCAGAATAGAGGGGTCTG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCAGACCCCTCTATTCTaGTGTCCTGGGGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLQTPLF*CPGDLP
Trigger: GGGAAGGTCCCCAGGACACCAGAATAGAGGGGTCTG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGGTTCTTGGTGTCCATaGTTCCCCTCAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPGSWCP*FPSGDC
Trigger: ACAGTCCCCTGAGGGGAACCATGGACACCAAGAACC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACGTGGAGGCTGGTTCTTaGTGTCCATGGTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNVEAGS*CPWFPS
Trigger: TGAGGGGAACCATGGACACCAAGAACCAGCCTCCAC...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTCTGGGCAGCCAGGTaGACCCTCACTCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTLWAAR*TLTLIS
Trigger: GGAAATGAGAGTGAGGGTCCACCTGGCTGCCCAGAG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCGTGTGTGTCCGGTGGTaGATGACGAACACTGACTTC +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAVCVRW*MTNTDF
Trigger: GAAGTCAGTGTTCGTCATCCACCACCGGACACACAC...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACCTCGTGTGTGTCCGGTaGTGGATGACGAACACTGAC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNLVCVR*WMTNTD
Trigger: GTCAGTGTTCGTCATCCACCACCGGACACACACGAG...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGGGCCACCTCCCCTTGTaGTGGCTTCTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLGHLPL*WLLCAF
Trigger: GAAAGCACAGAGAAGCCACCACAAGGGGAGGTGGCC...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACTCCAGAGTCTTCTGCTaGTGCCCCAGAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNSRVFC*CPRGCI
Trigger: GATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGA...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCTCACCCCACAGGCACTaGTCAGCCATAGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTSPHRH*SAIEGN
Trigger: GTTCCCTTCTATGGCTGACCAGTGCCTGTGGGGTGA...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCCCAACTGTGCTTTCCTaGGTCTTCTGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAPTVLS*VFCCSP
Trigger: TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGG...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCCCAATATCAAGTGTGTaGGGCCTGGATCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAPISSV*GLDLGS
Trigger: AGAGCCCAGATCCAGGCCCCACACACTTGATATTGG...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGGATCAGTCATGGGTTTaGGGAGGGGAAGATTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLDQSWV*GGEDWR
Trigger: CCTCCAATCTTCCCCTCCCCAAACCCATGACTGATC...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGAAATACTCCCCTCTGTaGTTTCAGTGGATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLKYSPL*FQWISE
Trigger: CTCAGAAATCCACTGAAACCACAGAGGGGAGTATTT...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACGAAGAGGCTGGAAGTaGCGGCCCAGTGGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTRRGWK*RPSGFL
Trigger: TAGGAAACCACTGGGCCGCCACTTCCAGCCTCTTCG...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCTGCGCGTCTGTACAGTaGGCCGGTTTCTATTGGCAG +
Preference number: 4 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTCASVQ*AGFYWQ
Trigger: CTGCCAATAGAAACCGGCCCACTGTACAGACGCGCA...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTGGGCCTGGACGGGCCTaGGAGACCAGGCCTGACACC +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFGPGRA*ETRPDT
Trigger: GGTGTCAGGCCTGGTCTCTCAGGCCCGTCCAGGCCC...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACCTTCACACTGCAGCTaGGCTGGACAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGPSHCS*AGQTPL
Trigger: TAGAGGGGTCTGTCCAGCTCAGCTGCAGTGTGAAGG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAGTGTCCGGTGGTGGATaGCGAACACTGACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTVSGGG*RTLTSS
Trigger: ACTGGAAGTCAGTGTTCGTCATCCACCACCGGACAC...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGAGCCCCCACTCCTCCTaGATCCTGGGTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWSPHSS*ILGGWK
Trigger: CTTCCACCCACCCAGGATTCAGGAGGAGTGGGGGCT...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR TCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCGCCCATGCCCTTTaGACTACATTTCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNTAHAL*TTFPMS
Trigger: GCTCATGGGAAATGTAGTTCAAAGGGCATGGGCGGT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAATCCAGCCCAACAGTTaGCCAGGGTCATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTIQPNS*PGSCCS
Trigger: ACTGCAGCATGACCCTGGGCAACTGTTGGGCTGGAT...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGATCCAGCCCAACAGTTaGCCAGGGTCATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLIQPNS*PGSCCS
Trigger: ACTGCAGCATGACCCTGGGCAACTGTTGGGCTGGAT...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWGPEGL*CLAAHG
Trigger: TCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGAGAGTCTTCTGCTGGTaGCCCAGAGGCTGTATCCAG +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRRVFCW*PRGCIQ
Trigger: CTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCT...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGAGAGTCTTCTGCTGGTaGCCCAGAGGCTGTATCCAG +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLRVFCW*PRGCIQ
Trigger: CTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCT...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGGCAGCTCCTTTTCCTTaGACCCAGGTCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLAAPFP*TQVFWG
Trigger: CCCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGC...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTTGGAATCGTCAAGATaGGCCTGGACGGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLLESSR*AWTGLR
Trigger: TCTCAGGCCCGTCCAGGCCCATCTTGACGATTCCAA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACTCAAGGGGGTGGTCTTaGAATCGTCAAGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNSRGWS*NRQDGP
Trigger: AGGCCCATCTTGACGATTCCAAGACCACCCCCTTGA...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTCCTGCTTCAGGACATaGGCTGTGATCCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLSCFRT*AVIQPN
Trigger: GTTGGGCTGGATCACAGCCCATGTCCTGAAGCAGGA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCATCCTGCTTCAGGACATaGGCTGTGATCCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPSCFRT*AVIQPN
Trigger: GTTGGGCTGGATCACAGCCCATGTCCTGAAGCAGGA...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGATCTATTCTGGTGTCCTaGGGACCTTCCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGSILVS*GPSPGD
Trigger: GTCCCCTGGGGAAGGTCCCCAGGACACCAGAATAGA...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCCTGTCCATCGACATTaGGCTCCTCCTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLPVHRH*APPSHC
Trigger: GCAGTGTGAAGGAGGAGCCCAATGTCGATGGACAGG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGGGTTCTTGGTGTCCATaGTTCCCCTCAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLGSWCP*FPSGDC
Trigger: ACAGTCCCCTGAGGGGAACCATGGACACCAAGAACC...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAGGTTCTTGGTGTCCATaGTTCCCCTCAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTGSWCP*FPSGDC
Trigger: ACAGTCCCCTGAGGGGAACCATGGACACCAAGAACC...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGGTGGAGGCTGGTTCTTaGTGTCCATGGTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLVEAGS*CPWFPS
Trigger: TGAGGGGAACCATGGACACCAAGAACCAGCCTCCAC...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACTCGTGTGTGTCCGGTaGTGGATGACGAACACTGAC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPLVCVR*WMTNTD
Trigger: GTCAGTGTTCGTCATCCACCACCGGACACACACGAG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGTCCAGAGTCTTCTGCTaGTGCCCCAGAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRSRVFC*CPRGCI
Trigger: GATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGA...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGTCACCCCACAGGCACTaGTCAGCCATAGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRSPHRH*SAIEGN
Trigger: GTTCCCTTCTATGGCTGACCAGTGCCTGTGGGGTGA...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGACTCCTCCTGAATCCTaGGTGGGTGGAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLTPPES*VGGRMW
Trigger: CCACATCCTTCCACCCACCCAGGATTCAGGAGGAGT...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGACTCCTCCTGAATCCTaGGTGGGTGGAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRTPPES*VGGRMW
Trigger: CCACATCCTTCCACCCACCCAGGATTCAGGAGGAGT...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAATGTGGGGAGAGCACTaGGGCGTTAAGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTMWGEH*GVKGFF
Trigger: GAAGAAGCCCTTAACGCCCCAGTGCTCTCCCCACAT...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAAGAGTCTTCTGCTGGTaGCCCAGAGGCTGTATCCAG +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGRVFCW*PRGCIQ
Trigger: CTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCT...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGCAGCTCCTTTTCCTTaGACCCAGGTCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGAAPFP*TQVFWG
Trigger: CCCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACAACGGAAGCCAACTGTaGTTTCCTGGGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNNGSQL*FPGSSA
Trigger: AGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGTCGTCAAGATGGGCCTaGACGGGCCTGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWSSRWA*TGLRDQ
Trigger: CTGGTCTCTCAGGCCCGTCCAGGCCCATCTTGACGA...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGTCAAGGGGGTGGTCTTaGAATCGTCAAGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRSRGWS*NRQDGP
Trigger: AGGCCCATCTTGACGATTCCAAGACCACCCCCTTGA...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTCAAGGGGGTGGTCTTaGAATCGTCAAGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLSRGWS*NRQDGP
Trigger: AGGCCCATCTTGACGATTCCAAGACCACCCCCTTGA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACATCAAGGGGGTGGTCTTaGAATCGTCAAGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGETEANCAFLGLLLLSTSRGWS*NRQDGP
Trigger: AGGCCCATCTTGACGATTCCAAGACCACCCCCTTGA...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGGGACCCAGAGGGGATaGCATTCTTGCTCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWGTQRG*HSCSRG
Trigger: CCCCCTTGAGCAAGAATGCCATCCCCTCTGGGTCCC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCGCGCACCCAGGCCTaGATCTCGGGAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFPRTQA*ISGGSV
Trigger: CACACTGCCTCCCGAGATCCAGGCCTGGGTGCGCGG...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAACACTGCAGCTGAGCTaGACAGACCCCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPTLQLS*TDPSIL
Trigger: CAGAATAGAGGGGTCTGTCCAGCTCAGCTGCAGTGT...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACCTGTCCATCGACATTaGGCTCCTCCTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGPVHRH*APPSHC
Trigger: GCAGTGTGAAGGAGGAGCCCAATGTCGATGGACAGG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGTGGAGGCTGGTTCTTaGTGTCCATGGTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGVEAGS*CPWFPS
Trigger: TGAGGGGAACCATGGACACCAAGAACCAGCCTCCAC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGAAGGATGTGGAGGCTaGTTCTTGGTGTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPEGCGG*FLVSMV
Trigger: AACCATGGACACCAAGAACCAGCCTCCACATCCTTC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGTGTGTGTCCGGTGGTaGATGACGAACACTGACTTC +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPVCVRW*MTNTDF
Trigger: GAAGTCAGTGTTCGTCATCCACCACCGGACACACAC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGGTGTGTGTCCGGTGGTaGATGACGAACACTGACTTC +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLVCVRW*MTNTDF
Trigger: GAAGTCAGTGTTCGTCATCCACCACCGGACACACAC...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGATCACCCCACAGGCACTaGTCAGCCATAGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGSPHRH*SAIEGN
Trigger: GTTCCCTTCTATGGCTGACCAGTGCCTGTGGGGTGA...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCCAACTGTGCTTTCCTaGGTCTTCTGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLPTVLS*VFCCSP
Trigger: TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCAAGTGTGTGGGGCCTaGATCTGGGCTCTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLQVCGA*IWALCV
Trigger: TACACAAAGAGCCCAGATCCAGGCCCCACACACTTG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTTGGTCTCTGGGTCCATaGCGGGCAGGCATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFWSLGP*RAGMGD
Trigger: GTCCCCCATGCCTGCCCGTCATGGACCCAGAGACCA...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTTCTGCAGGTGTGGGCTaGGTGGGCACTGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFSAGVG*VGTGGV
Trigger: GACACCGCCAGTGCCCACTCAGCCCACACCTGCAGA...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGAACTACATTTCCCATaGGCATCAGCAAGACAGGCG +
Preference number: 4 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRELHFP*ASARQA
Trigger: CGCCTGTCTTGCTGATGCTCATGGGAAATGTAGTTC...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGCACTCTGGCATCCCCTaGTGCCTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWHSGIP*CLQSLL
Trigger: CAGAAGACTCTGGAGGCAGCAGGGGATGCCAGAGTG...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAAACGGAAGCCAACTGTaGTTTCCTGGGTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPNGSQL*FPGSSA
Trigger: AGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTT...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACGAAGGCACCGCCCATaGCCTTTGAACTACATTTCC +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGRRHRP*PLNYIS
Trigger: GGAAATGTAGTTCAAAGGGCATGGGCGGTGCCTTCG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGTCTATTCTGGTGTCCTaGGGACCTTCCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWSILVS*GPSPGD
Trigger: GTCCCCTGGGGAAGGTCCCCAGGACACCAGAATAGA...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGAAGGATGTGGAGGCTaGTTCTTGGTGTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPEGCGG*FLVSMV
Trigger: AACCATGGACACCAAGAACCAGCCTCCACATCCTTC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGGGGCTGAGTGGGCACTaGCGGTGTCCCTGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLGLSGH*RCPWAH
Trigger: GTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCC...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGGCCACCTCCCCTTGTaGTGGCTTCTCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWGHLPL*WLLCAF
Trigger: GAAAGCACAGAGAAGCCACCACAAGGGGAGGTGGCC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCTGTCTGGCTGCTCATaGAACCTCCGGCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFLSGCS*NLRPVA
Trigger: GGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAG...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR CCA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGGTGAGGTTTCACAGGTaGAAGAGTCTGGCCCCAATA +
Preference number: 4 (lower is better)
Translates to: TQGAGETEANCAFLGLLLVRFHR*KSLAPI
Trigger: TATTGGGGCCAGACTCTTCCACCTGTGAAACCTCAC...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGTTCTGGAGTCAGCCTaGTGGGAACTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGVLESA*WELSPL
Trigger: AAGAGGAGAGAGTTCCCACCAGGCTGACTCCAGAAC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGCTTAGGCCTTTTCTCTaGGACTATGCAGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLLRPFL*DYAESQ
Trigger: CTGGGACTCTGCATAGTCCCAGAGAAAAGGCCTAAG...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAAGTCCCAGGGTTATATaGTCTCCCTCCGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGSPRVI*SPSALR
Trigger: TCTCAGAGCGGAGGGAGACCATATAACCCTGGGACT...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTGTCCGGTGGTGGATaGCGAACACTGACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWVSGGG*RTLTSS
Trigger: ACTGGAAGTCAGTGTTCGTCATCCACCACCGGACAC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTGCTGCGACTTCCAGCTaGAGCTGCACCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFAATSS*SCTRTP
Trigger: AGGAGTGCGGGTGCAGCTTCAGCTGGAAGTCGCAGC...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCAGTCACTGCAGAAGTaGCGCCGCTGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFQSLQK*RRWPVW
Trigger: CCACACAGGCCAGCGGCGTCACTTCTGCAGTGACTG...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR GCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCCCTCAGGGGACTGTaGTGCAAGTGGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFPLRGL*CKWRAG
Trigger: TCCAGCCCTCCACTTGCAGCACAGTCCCCTGAGGGG...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGGAGCGTCGGGGGTGGTaGGGAAAGGCCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLERRGW*GKATSP
Trigger: AGGGGAGGTGGCCTTTCCGCACCACCCCCGACGCTC...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFGPEGL*CLAAHG
Trigger: TCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCC...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCATCTTGCTCAAGGGGGTaGTCTTGGAATCGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPSCSRG*SWNRQD
Trigger: ATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGA...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCCGCGCACCCAGGCCTaGATCTCGGGAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLPRTQA*ISGGSV
Trigger: CACACTGCCTCCCGAGATCCAGGCCTGGGTGCGCGG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGGTTCTTGGTGTCCATaGTTCCCCTCAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWGSWCP*FPSGDC
Trigger: ACAGTCCCCTGAGGGGAACCATGGACACCAAGAACC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTGGAGGCTGGTTCTTaGTGTCCATGGTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWVEAGS*CPWFPS
Trigger: TGAGGGGAACCATGGACACCAAGAACCAGCCTCCAC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGTCCAGAGTCTTCTGCTaGTGCCCCAGAGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWSRVFC*CPRGCI
Trigger: GATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGA...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTAGGGAGCCTGGTGCTTaGCAGTCACCCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFREPGA*QSPHRH
Trigger: GTGCCTGTGGGGTGACTGCCAAGCACCAGGCTCCCT...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGGTTCAGGGACCTACTaGGATTCTGGTGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWGSGTY*DSGGPS
Trigger: ACTTGGGCCACCAGAATCCCAGTAGGTCCCTGAACC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACCTGTTTTGGTTTCTTTaGATACCTGGGAATCCCTGC +
Preference number: 4 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNLFWFL*IPGNPC
Trigger: GCAGGGATTCCCAGGTATCCAAAGAAACCAAAACAG...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTGTACAGTTCCTTCTGTaGCCGGTCCAGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFVQFLL*PVQQPP
Trigger: TGGGGGCTGCTGGACCGGTCACAGAAGGAACTGTAC...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
CDS-3UTR CCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTGGGACCCAGAGGGGATaGCATTCTTGCTCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFGTQRG*HSCSRG
Trigger: CCCCCTTGAGCAAGAATGCCATCCCCTCTGGGTCCC...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGACACTGCAGCTGAGCTaGACAGACCCCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWTLQLS*TDPSIL
Trigger: CAGAATAGAGGGGTCTGTCCAGCTCAGCTGCAGTGT...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCAGTGGGGGCAGGAGTaGCAGCCCCAGACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLQWGQE*QPQTSP
Trigger: AGGGCTTGTCTGGGGCTGCCACTCCTGCCCCCACTG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGACGTGTAGGGCTTCCTaGGGGTGGCAGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLTCRAS*GWQPAP
Trigger: TGGAGCCGGCTGCCACCCCCAGGAAGCCCTACACGT...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGCCAACTGTGCTTTCCTaGGTCTTCTGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWPTVLS*VFCCSP
Trigger: TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGG...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCCATCCTCATACTTGTaGGTTATGTGTTTTAAATAC +
Preference number: 4 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGPSSYL*VMCFKY
Trigger: GTATTTAAAACACATAACCCACAAGTATGAGGATGG...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTTACACCGCCTGTTTTaGTTTCTTTGGATACCTGGG +
Preference number: 4 (lower is better)
Translates to: GETEANCAFLGLLLLSTLLHRLF*FLWIPG
Trigger: CCCAGGTATCCAAAGAAACCAAAACAGGCGGTGTAA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGGCTGCGACTTCCAGCTaGAGCTGCACCCGCACTCCT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLAATSS*SCTRTP
Trigger: AGGAGTGCGGGTGCAGCTTCAGCTGGAAGTCGCAGC...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR TCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCAGTCACTGCAGAAGTaGCGCCGCTGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLQSLQK*RRWPVW
Trigger: CCACACAGGCCAGCGGCGTCACTTCTGCAGTGACTG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCCCCTCAGGGGACTGTaGTGCAAGTGGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLPLRGL*CKWRAG
Trigger: TCCAGCCCTCCACTTGCAGCACAGTCCCCTGAGGGG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGAAGGATGTGGAGGCTaGTTCTTGGTGTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWEGCGG*FLVSMV
Trigger: AACCATGGACACCAAGAACCAGCCTCCACATCCTTC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFRDCAV*LLMEPP
Trigger: CGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCT...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTTGCCCAATCAGAGGTaGCGCTTGCTTGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLLPNQR*RLLGPA
Trigger: GGCGGGGCCAAGCAAGCGCCACCTCTGATTGGGCAA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGTAGAAGACCACCCTaGGCCTGGGCTTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLCRRPP*AWAFSR
Trigger: GCGGGAGAAAGCCCAGGCTCAGGGTGGTCTTCTACA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGGAGGGCTGGAGGGTaGCACTTCCTGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLWRAGG*HFLSID
Trigger: GTCGATGGACAGGAAGTGGCACCCTCCAGCCCTCCA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGACTGTGCTGTCTGGCTaGTCATGGAACCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLTVLSG*SWNLRP
Trigger: CGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGT...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGGCCTCCAGAGTCTTCTaGTGGTGCCCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLASRVF*WCPRGC
Trigger: ACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGC...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCTGCAAGTGGAGGGCTaGAGGGTGCCACTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLLQVEG*RVPLPV
Trigger: GACAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCACCCAGGTCTTTTaGGGGAGACCAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLCTQVF*GRPDQG
Trigger: CCCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCATTTCACGTGACTCTCTaGGTATCTACTTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPFHVTL*VSTCLT
Trigger: TGTCAAACAAGTAGATACCCAGAGAGTCACGTGAAA...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR TCA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTTGTGACCGCAGTCTCTaGCGTCTTCAGATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFCDRSL*RLQMSV
Trigger: GACTGACATCTGAAGACGTCAGAGACTGCGGTCACA...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCCCAGGGTCATGCTaGAGTCCTTCGACTAGGGCA +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLCPGSC*SPSTRA
Trigger: TGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCACTCTGGCATCCCCTaGTGCCTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLHSGIP*CLQSLL
Trigger: CAGAAGACTCTGGAGGCAGCAGGGGATGCCAGAGTG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCTCTGGGCAGCCAGGTaGACCCTCACTCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLLWAAR*TLTLIS
Trigger: GGAAATGAGAGTGAGGGTCCACCTGGCTGCCCAGAG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGGGCCTATCCGAGGGATaGTCGAACTTCGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLGLSEG*SNFGIC
Trigger: ACAGATCCCGAAGTTCGAGCATCCCTCGGATAGGCC...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGAGGGGATGGCATTCTTaGTCAAGGGGGTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLRGWHS*SRGWSW
Trigger: CCAAGACCACCCCCTTGAGCAAGAATGCCATCCCCT...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGAGTTGCCCAGGGTCATaGTGCAGTCCTTCGACTAGG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLSCPGS*CSPSTR
Trigger: CCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACT...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGATCCAGCCCAACAGTTaGCCAGGGTCATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLIQPNS*PGSCCS
Trigger: ACTGCAGCATGACCCTGGGCAACTGTTGGGCTGGAT...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGAGAGTCTTCTGCTGGTaGCCCAGAGGCTGTATCCAG +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLRVFCW*PRGCIQ
Trigger: CTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCT...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCTCGTGTGTGTCCGGTaGTGGATGACGAACACTGAC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLLVCVR*WMTNTD
Trigger: GTCAGTGTTCGTCATCCACCACCGGACACACACGAG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTCACCCCACAGGCACTaGTCAGCCATAGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLSPHRH*SAIEGN
Trigger: GTTCCCTTCTATGGCTGACCAGTGCCTGTGGGGTGA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTTGGAATCGTCAAGATaGGCCTCAACCCGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLLESSR*ASTRSG
Trigger: ACCGCTCCGGGTTGAGGCCCATCTTGACGATTCCAA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTCTTGCTCAAGGGGGTaGTCTTGGAATCGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLSCSRG*SWNRQD
Trigger: ATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR GCA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGCAGGCTGATCGGACATaGTCAACCGTTTATTTACCT +
Preference number: 4 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLQADRT*STVYLP
Trigger: AGGTAAATAAACGGTTGAGCATGTCCGATCAGCCTG...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 90 bp TGGGCCTCAACCCGGAGCGGTTGCTTGGAGGCCGCTTCCCGGATGTaGCGCCGCACAACGCGGGGCGCCTCAGCCGGGTGTTGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: WASTRSGCLEAASRM*RRTTRGASAGCCPG
Trigger: GCCGGGGCAACACCCGGCTGAGGCGCCCCGCGTTGTGCGGCGCCACATCCGGGAAGCGGCCTCCAAGCAACCGCTCCGGGTTGAGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS GCA 90 bp TCCCGGATGTGGCGCCGCACAACGCGGGGCGCCTCAGCCGGGTGTTaGCCCGGCGACGCCGCGCTGACCAATCTCTCGCCTGCACCGAAG +
Preference number: 5 (lower is better)
Translates to: SRMWRRTTRGASAGC*PGDAALTNLSPAPK
Trigger: CTTCGGTGCAGGCGAGAGATTGGTCAGCGCGGCGTCGCCGGGGCAACACCCGGCTGAGGCGCCCCGCGTTGTGCGGCGCCACATCCGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 90 bp CAACGCGGGGCGCCTCAGCCGGGTGTTGCCCCGGCGACGCCGCGCTaGCCAATCTCTCGCCTGCACCGAAGGCACCGCCCATGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: QRGAPQPGVAPATPR*PISRLHRRHRPCPL
Trigger: CAAAGGGCATGGGCGGTGCCTTCGGTGCAGGCGAGAGATTGGTCAGCGCGGCGTCGCCGGGGCAACACCCGGCTGAGGCGCCCCGCGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 90 bp CTGGGGGTGGCAGCCGGCTCCAGTCTCGTCTCTGCAGGTGTGGGCTaGGTGGGCACTGGCGGTGTCCCTGGGCGCACAGTGGGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LGVAAGSSLVSAGVG*VGTGGVPGRTVGAG
Trigger: TCCTGCCCCCACTGTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCCACACCTGCAGAGACGAGACTGGAGCCGGCTGCCACCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS CCA 90 bp GGGTGGCAGCCGGCTCCAGTCTCGTCTCTGCAGGTGTGGGCTGAGTaGGCACTGGCGGTGTCCCTGGGCGCACAGTGGGGGCAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GWQPAPVSSLQVWAE*ALAVSLGAQWGQEW
Trigger: CCACTCCTGCCCCCACTGTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCCACACCTGCAGAGACGAGACTGGAGCCGGCTGCCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS GCA 90 bp CGTGTAGGGCTTCCTGGGGGTGGCAGCCGGCTCCAGTCTCGTCTCTaGAGGTGTGGGCTGAGTGGGCACTGGCGGTGTCCCTGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: RVGLPGGGSRLQSRL*RCGLSGHWRCPWAH
Trigger: GTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCCACACCTGCAGAGACGAGACTGGAGCCGGCTGCCACCCCCAGGAAGCCCTACACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS GCA 90 bp GAGGCTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTaGTGTCTGGCTGCTCATGGAACCTCCGGCCGGTGGCTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: EAVSRPREHRGPEGL*CLAAHGTSGRWLLR
Trigger: CCGCAAGAGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610298.1
CDS TCA 90 bp GCTTCCAAGTGGACCCGGGAGAGGCGGTGGTGTAGAAGACCACCCTaGGCCTGGGCTTTCTCCCGCCAGGAGGGTGCGAGGGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: ASKWTRERRWCRRPP*AWAFSRQEGARAIF
Trigger: AAAGATGGCCCTCGCACCCTCCTGGCGGGAGAAAGCCCAGGCTCAGGGTGGTCTTCTACACCACCGCCTCTCCCGGGTCCACTTGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGCTGGCTTGGGACCCCTaGTTCACTCTGGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLLAWDP*FTLASP
Trigger: AGGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAG...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS GCA 90 bp TATCCGCCCGCCTCCAGCTGTTCCCGTGGCAACGTTCAGGAGCGTTaGCTCGACTTCCGAAGAGGCTGGAAGTGGCGGCCCAGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: YPPASSCSRGNVQER*LDFRRGWKWRPSGF
Trigger: GAAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTTGCCACGGGAACAGCTGGAGGCGGGCGGATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCCTGGCTTGGGACCCCTaGTTCACTCTGGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPLAWDP*FTLASP
Trigger: AGGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAG...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCGGGCAGGGAACTGGCTaGGGACCCCTTGTTCACTCT +
Preference number: 5 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPGQGTG*GPLVHS
Trigger: AGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCC...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGGTGCGAGGGCCATCTTaGACCTCTGTTAAGCGCCCT +
Preference number: 5 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLVRGPS*TSVKRP
Trigger: AGGGCGCTTAACAGAGGTCAAAGATGGCCCTCGCAC...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 90 bp ACTGTCCCTGAGGGGTGGGGGCTCCCAAGTGGTTCCTCTGTCTTCTaGGCTGCAGGGAGCACCTCCTGCTTCAGGACATGGGCTGTGATC +
Preference number: 5 (lower is better)
Translates to: TVPEGWGLPSGSSVF*AAGSTSCFRTWAVI
Trigger: GATCACAGCCCATGTCCTGAAGCAGGAGGTGCTCCCTGCAGCCCAGAAGACAGAGGAACCACTTGGGAGCCCCCACCCCTCAGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000594468.1
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 90 bp GGCTGGAAGTGGCGGCCCAGTGGTTTCCTAGGTCGAGTAGTTCGCTaGGACTCGCTTCCAAGTGGACCCGGGAGAGGCGGTGGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: GWKWRPSGFLGRVVR*DSLPSGPGRGGGVE
Trigger: TTCTACACCACCGCCTCTCCCGGGTCCACTTGGAAGCGAGTCCCAGCGAACTACTCGACCTAGGAAACCACTGGGCCGCCACTTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCGAGGGGATGGCATTCTaGCTCAAGGGGGTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPEGMAF*LKGVVL
Trigger: CAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTC...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGATCCAGCCCAACAGTaGCCCAGGGTCATGCTGCAG +
Preference number: 5 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGDPAQQ*PRVMLQ
Trigger: CTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGGATCCAGCCCAACAGTaGCCCAGGGTCATGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QALVSHRREPRPPSRRQGDPAQQ*PRVMLQ
Trigger: CTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATC...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCAAAGGCCACCTCCCCTaGTGGTGGCTTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPKGHLP*WWLLCA
Trigger: AGCACAGAGAAGCCACCACAAGGGGAGGTGGCCTTT...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGGGCAGGGAACTGGCTaGGGACCCCTTGTTCACTCT +
Preference number: 5 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGGQGTG*GPLVHS
Trigger: AGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCCAGGAGAGGGAGTGTaGTCAGCCCAGGCCATGTCA +
Preference number: 5 (lower is better)
Translates to: QALVSHRREPRPPSRRQGPGEGV*SAQAMS
Trigger: TGACATGGCCTGGGCTGACAACACTCCCTCTCCTGG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS TCA 90 bp TTGGAATCGTCAAGATGGGCCTGGACGGGCCTGAGAGACCAGGCCTaGCACCCGGCCTATCCGAGGGATGCTCGAACTTCGGGATCTGTC +
Preference number: 5 (lower is better)
Translates to: LESSRWAWTGLRDQA*HPAYPRDARTSGSV
Trigger: GACAGATCCCGAAGTTCGAGCATCCCTCGGATAGGCCGGGTGTCAGGCCTGGTCTCTCAGGCCCGTCCAGGCCCATCTTGACGATTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000622313.4
CDS TCA 90 bp GATGGAAGGGTGGTGTCAGGGGCTGCCCACATGAGCCATGGCAGATaGGGAGCTCCTCTGCTGTGTGACATGGCACGTAGCCAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: DGRVVSGAAHMSHGR*GAPLLCDMARSQPL
Trigger: CAAGGGCTGGCTACGTGCCATGTCACACAGCAGAGGAGCTCCTCATCTGCCATGGCTCATGTGGGCAGCCCCTGACACCACCCTTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594468.1
CDS CCA 90 bp GGAGCGTTGCCTCGACTTCCGAAGAGGCTGGAAGTGGCGGCCCAGTaGTTTCCTAGGTCGAGTAGTTCGCTGGGACTCGCTTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: GALPRLPKRLEVAAQ*FPRSSSSLGLASKW
Trigger: CCACTTGGAAGCGAGTCCCAGCGAACTACTCGACCTAGGAAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 90 bp GGCAACGTTCAGGAGCGTTGCCTCGACTTCCGAAGAGGCTGGAAGTaGCGGCCCAGTGGTTTCCTAGGTCGAGTAGTTCGCTGGGACTCG +
Preference number: 5 (lower is better)
Translates to: GNVQERCLDFRRGWK*RPSGFLGRVVRWDS
Trigger: CGAGTCCCAGCGAACTACTCGACCTAGGAAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 90 bp TCCCGTGGCAACGTTCAGGAGCGTTGCCTCGACTTCCGAAGAGGCTaGAAGTGGCGGCCCAGTGGTTTCCTAGGTCGAGTAGTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: SRGNVQERCLDFRRG*KWRPSGFLGRVVRW
Trigger: CCAGCGAACTACTCGACCTAGGAAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTTGCCACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CAGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTCAAGGGGGTGGTCTaGGAATCGTCAAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: QALVSHRREPRPPSRRQGLKGVV*ESSRWA
Trigger: GGCCCATCTTGACGATTCCAAGACCACCCCCTTGAG...CCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCCTCAAGGGGGTGGTCTaGGAATCGTCAAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGLKGVV*ESSRWA
Trigger: GGCCCATCTTGACGATTCCAAGACCACCCCCTTGAG...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCGAGGGGATGGCATTCTaGCTCAAGGGGGTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGEGMAF*LKGVVL
Trigger: CAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTC...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCTGTGGAGGCTGGTTCTaGGTGTCCATGGTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGCGGWF*VSMVPL
Trigger: GAGGGGAACCATGGACACCAAGAACCAGCCTCCACA...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp AGGCACTGGTCAGCCATAGAAGGGAACCCAGACCTCCCTCTAGGAGGCAGGGGCAAAGGCCACCTCCCCTaGTGGTGGCTTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RHWSAIEGNPDLPLGGRGKGHLP*WWLLCA
Trigger: AGCACAGAGAAGCCACCACAAGGGGAGGTGGCCTTT...GCCCCTGCCTCCTAGAGGGAGGTCTGGGTTCCCTTCTATGGCTGACCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCAAAGGCCACCTCCCCTaGTGGTGGCTTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGKGHLP*WWLLCA
Trigger: AGCACAGAGAAGCCACCACAAGGGGAGGTGGCCTTT...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp CCAGACCAGGGGCAGGGAACTGGCTTGGGACCCCTTGTTCACTCTGGCATCCCCTCCCGGGTTATAAACTaGCGCGTCTGTACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: PDQGQGTGLGPLVHSGIPSRVIN*RVCTVG
Trigger: GCCCACTGTACAGACGCGCAAGTTTATAACCCGGGA...GGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCCGCTGACCCGCATTaGCAGCAGCCTCTGACGCCT +
Preference number: 5 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPPADPH*QQPLTP
Trigger: AGGCGTCAGAGGCTGCTGCAAATGCGGGTCAGCGGG...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CTGTATCCAGGCCCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTGGCTGCACCGCCCATGCCCTTaGAACTACATTTCCCATGAG +
Preference number: 5 (lower is better)
Translates to: LYPGPENTEAPRDCAVWLHRPCP*NYISHE
Trigger: CTCATGGGAAATGTAGTTCAAAGGGCATGGGCGGTG...CAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGGGCCTGGATACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 90 bp TTGGAATCGTCAAGATGGGCCTGGACGGGCCTGAGAGACCAGGCCTaGCACCCGGCCTATCCGAGGGATGCTCGAACTTCGGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: LESSRWAWTGLRDQA*HPAYPRDARTSGSQ
Trigger: TTGAGATCCCGAAGTTCGAGCATCCCTCGGATAGGCCGGGTGTCAGGCCTGGTCTCTCAGGCCCGTCCAGGCCCATCTTGACGATTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600013.5
CDS GCA 90 bp GGAGGCTGGTTCTTGGTGTCCATGGTTCCCCTCAGGGGACTGTGCTaGAAGTGGAGGGCTGGAGGGTGCCACTTCCTGTCCATCGACATT +
Preference number: 5 (lower is better)
Translates to: GGWFLVSMVPLRGLC*KWRAGGCHFLSIDI
Trigger: AATGTCGATGGACAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAGGGGAACCATGGACACCAAGAACCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGCTGGCTTGGGACCCCTaGTTCACTCTGGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLLAWDP*FTLASP
Trigger: AGGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAG...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ATCCCCTGCTGCCTCCAGAGTCTTCTGCTGGTGCCCCAGAGGCTGTATCCAGGCAGCAGCTCCTTTTCCTaGCACCCAGGTCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: IPCCLQSLLLVPQRLYPGSSSFS*HPGLLG
Trigger: CCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGCT...GCCTGGATACAGCCTCTGGGGCACCAGCAGAAGACTCTGGAGGCAGCAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCCCAGGAGAGGGAGTGTaGTCAGCCCAGGCCATGTCA +
Preference number: 5 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQAPGEGV*SAQAMS
Trigger: TGACATGGCCTGGGCTGACAACACTCCCTCTCCTGG...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACTCAACCCGGAGCGGTaGCTTGGAGGCCGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGLNPER*LGGRFP
Trigger: CGGGAAGCGGCCTCCAAGCAACCGCTCCGGGTTGAG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp TGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGTGGGCCGGTTTCTATaGGCAGGTGAGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: CTDEWEGTVFEHPPEARRVGRFL*AGEGRG
Trigger: CCCCCTCCCCTCACCTGCCAATAGAAACCGGCCCAC...CCTCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 90 bp CCACTTCCTGTCCATCGACATTGGGCTCCTCCTTCACACTGCAGCTaGGCTGGACAGACCCCTCTATTCTGGTGTCCTGGGGACCTTCCC +
Preference number: 5 (lower is better)
Translates to: PLPVHRHWAPPSHCS*AGQTPLFWCPGDLP
Trigger: GGGAAGGTCCCCAGGACACCAGAATAGAGGGGTCTGTCCAGCTCAGCTGCAGTGTGAAGGAGGAGCCCAATGTCGATGGACAGGAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000594468.1
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS TCA 90 bp GCTGACCAATCTCTCGCCTGCACCGAAGGCACCGCCCATGCCCTTTaGACTACATTTCCCATGAGCATCAGCAAGACAGGCGCGACCGTG +
Preference number: 5 (lower is better)
Translates to: ADQSLACTEGTAHAL*TTFPMSISKTGATV
Trigger: CACGGTCGCGCCTGTCTTGCTGATGCTCATGGGAAATGTAGTTCAAAGGGCATGGGCGGTGCCTTCGGTGCAGGCGAGAGATTGGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGATCCAGCCCAACAGTaGCCCAGGGTCATGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPDPAQQ*PRVMLQ
Trigger: CTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCATTGCACCCAGGTCTTTaGGGGGAGACCAGACCAGGG +
Preference number: 5 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPLHPGL*GETRPG
Trigger: CCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCAA...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS TCA 90 bp TGGGCTGCAGGGAGCACCTCCTGCTTCAGGACATGGGCTGTGATCTaGGGAGAAGAGGTAGGTCACAATGGCTCTAGCCAGGGTCTATCC +
Preference number: 5 (lower is better)
Translates to: WAAGSTSCFRTWAVI*GEEVGHNGSSQGLS
Trigger: GGATAGACCCTGGCTAGAGCCATTGTGACCTACCTCTTCTCCTCAGATCACAGCCCATGTCCTGAAGCAGGAGGTGCTCCCTGCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594468.1
CDS-3UTR CAA 90 bp ACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCTCAAGGGGGTGGTCTaGGAATCGTCAAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: TSGPASAQTSGKAQFLNTLKGVV*ESSRWA
Trigger: GGCCCATCTTGACGATTCCAAGACCACCCCCTTGAG...GGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACCTCAAGGGGGTGGTCTaGGAATCGTCAAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNLKGVV*ESSRWA
Trigger: GGCCCATCTTGACGATTCCAAGACCACCCCCTTGAG...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGATCCAGCCCAACAGTaGCCCAGGGTCATGCTGCAG +
Preference number: 5 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPDPAQQ*PRVMLQ
Trigger: CTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGGGGCAGGGAACTGGCTaGGGACCCCTTGTTCACTCT +
Preference number: 5 (lower is better)
Translates to: GETEANCAFLGLLLLSTLGQGTG*GPLVHS
Trigger: AGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCC...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGTTGCACCCAGGTCTTTaGGGGGAGACCAGACCAGGG +
Preference number: 5 (lower is better)
Translates to: TQGAGETEANCAFLGLLLLHPGL*GETRPG
Trigger: CCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCAA...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGAGACCTCAGGCCAGCAGCTCCTTTTCCTaGCACCCAGGTCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ANCAFLGLLLLSTLRPQASSSFS*HPGLLG
Trigger: CCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGCT...GGCCTGAGGTCTCAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACCAGGAGAGGGAGTGTaGTCAGCCCAGGCCATGTCA +
Preference number: 5 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPPGEGV*SAQAMS
Trigger: TGACATGGCCTGGGCTGACAACACTCCCTCTCCTGG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCCAGGAGAGGGAGTGTaGTCAGCCCAGGCCATGTCA +
Preference number: 5 (lower is better)
Translates to: TQGAGETEANCAFLGLLLPGEGV*SAQAMS
Trigger: TGACATGGCCTGGGCTGACAACACTCCCTCTCCTGG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 90 bp ACATCCACATTCACTTCAGGAGTCCCAGCCTTGACACACCTCTCCTaGGACTCCCACCCTAGCCAGGAATGTCCACACTTCCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TSTFTSGVPALTHLS*DSHPSQECPHFLQE
Trigger: CTCCTGGAGGAAGTGTGGACATTCCTGGCTAGGGTGGGAGTCCCAGGAGAGGTGTGTCAAGGCTGGGACTCCTGAAGTGAATGTGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594468.1
CDS-3UTR CAA 90 bp ACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCAAGGGGGTGGTCTaGGAATCGTCAAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: TQGAGETEANCAFLGLLLLKGVV*ESSRWA
Trigger: GGCCCATCTTGACGATTCCAAGACCACCCCCTTGAG...CAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGAGGGGATGGCATTCTaGCTCAAGGGGGTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPEGMAF*LKGVVL
Trigger: CAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACATGTGGAGGCTGGTTCTaGGTGTCCATGGTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: AGETEANCAFLGLLLLSTCGGWF*VSMVPL
Trigger: GAGGGGAACCATGGACACCAAGAACCAGCCTCCACA...TGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGTGTGGAGGCTGGTTCTaGGTGTCCATGGTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GETEANCAFLGLLLLSTLCGGWF*VSMVPL
Trigger: GAGGGGAACCATGGACACCAAGAACCAGCCTCCACA...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGACTGGCTTGGGACCCCTaGTTCACTCTGGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGLAWDP*FTLASP
Trigger: AGGGGATGCCAGAGTGAACAAGGGGTCCCAAGCCAG...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGAGGGCAGGGAACTGGCTaGGGACCCCTTGTTCACTCT +
Preference number: 5 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGGQGTG*GPLVHS
Trigger: AGAGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCC...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp TCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGAGGCAAGGATTGCACCCAGGTCTTTaGGGGGAGACCAGACCAGGG +
Preference number: 5 (lower is better)
Translates to: SAQTSGKAQFLNTHLRQGLHPGL*GETRPG
Trigger: CCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCAA...TCCTTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GAGACCTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACAGCAGCTCCTTTTCCTaGCACCCAGGTCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ETSGPASAQTSGKAQFLNSSSFS*HPGLLG
Trigger: CCCCAAAAGACCTGGGTGCAAGGAAAAGGAGCTGCT...GTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCACCTGGGGAAGGCACAGTTTTaGAACACCCACCTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: GPASAQTSGKAQFLNTHLGKAQF*NTHLRQ
Trigger: TTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCC...CAGGTGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACAACGTTCAGGAGCGTaGCCTCGACTTCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPQRSGA*PRLPKR
Trigger: CCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTTG...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 90 bp AGGAGGTACGGCAGAGTCCCAGGGTTATATGGTCTCCCTCCGCTCTaGGAGCAGCTCTTCCCGGGTTATAAACTTGCGCGTCTGTACAGT +
Preference number: 5 (lower is better)
Translates to: RRYGRVPGLYGLPPL*EQLFPGYKLARLYS
Trigger: ACTGTACAGACGCGCAAGTTTATAACCCGGGAAGAGCTGCTCTCAGAGCGGAGGGAGACCATATAACCCTGGGACTCTGCCGTACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp CTCAGGCCCAGCCTCTGCACAGACGAGTGGGAAGGCACAGTTTTTGAACACCCAGGGAAGGCACAGTTTTaGAACACCCACCTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: LRPSLCTDEWEGTVFEHPGKAQF*NTHLRQ
Trigger: TTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCC...TGGGTGTTCAAAAACTGTGCCTTCCCACTCGTCTGTGCAGAGGCTGGGCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCAGGGAAGGCACAGTTTTaGAACACCCACCTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: EQEKRKPTVLSWVFCCSPGKAQF*NTHLRQ
Trigger: TTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCC...TGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp GGAGAAACGGAAGCCAACTGTGCTTTCCTGGGTCTTCTGCTGCTCTCCACACTGGGGAAGGCACAGTTTTaGAACACCCACCTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: GETEANCAFLGLLLLSTLGKAQF*NTHLRQ
Trigger: TTGCCTCAGGTGGGTGTTCAAAAACTGTGCCTTCCC...CAGTGTGGAGAGCAGCAGAAGACCCAGGAAAGCACAGTTGGCTTCCGTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGGAGGGGATGGCATTCTaGCTCAAGGGGGTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWEGMAF*LKGVVL
Trigger: CAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTC...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp AATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTCCTGGAAAGGCCACCTCCCCTaGTGGTGGCTTCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: NSNTHREQEKRKPTVLSWKGHLP*WWLLCA
Trigger: AGCACAGAGAAGCCACCACAAGGGGAGGTGGCCTTT...CCAGGAAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS GCA 90 bp CCTACAAAGTCGGGGGTGGAGGTTTCCCTCCAGGCTGATCGGACATaGTCAACCGTTTATTTACCTTTGAATTTGGGGAGCAGAACTAGC +
Preference number: 5 (lower is better)
Translates to: PTKSGVEVSLQADRT*STVYLPLNLGSRTS
Trigger: GCTAGTTCTGCTCCCCAAATTCAAAGGTAAATAAACGGTTGAGCATGTCCGATCAGCCTGGAGGGAAACCTCCACCCCCGACTTTGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp GTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGCTTTTTGCACCCAGGTCTTTaGGGGGAGACCAGACCAGGG +
Preference number: 5 (lower is better)
Translates to: VKILTHTGSRRNGSQLCFLHPGL*GETRPG
Trigger: CCCTGGTCTGGTCTCCCCCAAAAGACCTGGGTGCAA...AAAGCACAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS TCA 90 bp AGATGTCAGTCCTACAAAGTCGGGGGTGGAGGTTTCCCTCCAGGCTaGTCGGACATGCTCAACCGTTTATTTACCTTTGAATTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: RCQSYKVGGGGFPPG*SDMLNRLFTFEFGE
Trigger: CTCCCCAAATTCAAAGGTAAATAAACGGTTGAGCATGTCCGATCAGCCTGGAGGGAAACCTCCACCCCCGACTTTGTAGGACTGACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS-3UTR CAA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGGATCCAGCCCAACAGTaGCCCAGGGTCATGCTGCAG +
Preference number: 5 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLDPAQQ*PRVMLQ
Trigger: CTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATC...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS-3UTR CAA 90 bp ATTTATGTTAAAATTCTAACACACACAGGGAGCAGGAGAAACGGAAGCCAACTGTGTGGAGGCTGGTTCTaGGTGTCCATGGTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: IYVKILTHTGSRRNGSQLCGGWF*VSMVPL
Trigger: GAGGGGAACCATGGACACCAAGAACCAGCCTCCACA...CAGTTGGCTTCCGTTTCTCCTGCTCCCTGTGTGTGTTAGAATTTTAACATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS CAA 72 bp GTGGCGCCGCACAACGCGGGGCGCCTCAGCCGGGTGTaGCCCCGGCGACGCCGCGCTGACCAATCTCTCGCC +
Preference number: 6 (lower is better)
Translates to: VAPHNAGRLSRV*PRRRRADQSLA
Trigger: GGCGAGAGATTGGTCAGCGCGGCGTCGCCGGGGCAACACCCGGCTGAGGCGCCCCGCGTTGTGCGGCGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS GCA 72 bp TGGCGCCGCACAACGCGGGGCGCCTCAGCCGGGTGTTaGCCCGGCGACGCCGCGCTGACCAATCTCTCGCCT +
Preference number: 6 (lower is better)
Translates to: WRRTTRGASAGC*PGDAALTNLSP
Trigger: AGGCGAGAGATTGGTCAGCGCGGCGTCGCCGGGGCAACACCCGGCTGAGGCGCCCCGCGTTGTGCGGCGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 72 bp GCGCCTCAGCCGGGTGTTGCCCCGGCGACGCCGCGCTaGCCAATCTCTCGCCTGCACCGAAGGCACCGCCCA +
Preference number: 6 (lower is better)
Translates to: APQPGVAPATPR*PISRLHRRHRP
Trigger: TGGGCGGTGCCTTCGGTGCAGGCGAGAGATTGGTCAGCGCGGCGTCGCCGGGGCAACACCCGGCTGAGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 72 bp ACCCGGAGCGGTTGCTTGGAGGCCGCTTCCCGGATGTaGCGCCGCACAACGCGGGGCGCCTCAGCCGGGTGT +
Preference number: 6 (lower is better)
Translates to: TRSGCLEAASRM*RRTTRGASAGC
Trigger: ACACCCGGCTGAGGCGCCCCGCGTTGTGCGGCGCCACATCCGGGAAGCGGCCTCCAAGCAACCGCTCCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CAA 90 bp TTCCCGGATGTGGCGCCGCACAACGCGGGGCGCCTCAGCCGGGTGTaGCCCCGGCGACGCCGCGCTGACCAATCTCTCGCCTGCACCGAA +
Preference number: 6 (lower is better)
Translates to: FPDVAPHNAGRLSRV*PRRRRADQSLACTE
Trigger: TTCGGTGCAGGCGAGAGATTGGTCAGCGCGGCGTCGCCGGGGCAACACCCGGCTGAGGCGCCCCGCGTTGTGCGGCGCCACATCCGGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 72 bp CCGGCTCCAGTCTCGTCTCTGCAGGTGTGGGCTGAGTaGGCACTGGCGGTGTCCCTGGGCGCACAGTGGGGG +
Preference number: 6 (lower is better)
Translates to: PAPVSSLQVWAE*ALAVSLGAQWG
Trigger: CCCCCACTGTGCGCCCAGGGACACCGCCAGTGCCCACTCAGCCCACACCTGCAGAGACGAGACTGGAGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS GCA 72 bp CTTCCTGGGGGTGGCAGCCGGCTCCAGTCTCGTCTCTaGAGGTGTGGGCTGAGTGGGCACTGGCGGTGTCCC +
Preference number: 6 (lower is better)
Translates to: LPGGGSRLQSRL*RCGLSGHWRCP
Trigger: GGGACACCGCCAGTGCCCACTCAGCCCACACCTGCAGAGACGAGACTGGAGCCGGCTGCCACCCCCAGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000610298.1
ENST00000622313.4
CDS TCA 72 bp TGGACCCGGGAGAGGCGGTGGTGTAGAAGACCACCCTaGGCCTGGGCTTTCTCCCGCCAGGAGGGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: WTRERRWCRRPP*AWAFSRQEGAR
Trigger: CCTCGCACCCTCCTGGCGGGAGAAAGCCCAGGCTCAGGGTGGTCTTCTACACCACCGCCTCTCCCGGGTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 72 bp GAGGCGGGCAGTCTCAGGCTCCTCAAGGGTGGTCTCTaGGTCCATGACGGGCAGGCATGGGGGACCCAGAGG +
Preference number: 6 (lower is better)
Translates to: EAGSLRLLKGGL*VHDGQAWGTQR
Trigger: CCTCTGGGTCCCCCATGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAGGAGCCTGAGACTGCCCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000594468.1
ENST00000596341.5
ENST00000600013.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 72 bp CCCGAGAACACCGAGGCCCCGAGGGACTGTGCTGTCTaGCTGCTCATGGAACCTCCGGCCGGTGGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: PENTEAPRDCAV*LLMEPPAGGSC
Trigger: GCAAGAGCCACCGGCCGGAGGTTCCATGAGCAGCCAGACAGCACAGTCCCTCGGGGCCTCGGTGTTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610298.1
CDS GCA 72 bp GCCTCCAGCTGTTCCCGTGGCAACGTTCAGGAGCGTTaGCTCGACTTCCGAAGAGGCTGGAAGTGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: ASSCSRGNVQER*LDFRRGWKWRP
Trigger: GGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTTGCCACGGGAACAGCTGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 72 bp AATCGTCAAGATGGGCCTCAACCCGGAGCGGTTGCTTaGAGGCCGCTTCCCGGATGTGGCGCCGCACAACGC +
Preference number: 6 (lower is better)
Translates to: NRQDGPQPGAVA*RPLPGCGAAQR
Trigger: GCGTTGTGCGGCGCCACATCCGGGAAGCGGCCTCCAAGCAACCGCTCCGGGTTGAGGCCCATCTTGACGATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CAA 72 bp CTTGGAATCGTCAAGATGGGCCTCAACCCGGAGCGGTaGCTTGGAGGCCGCTTCCCGGATGTGGCGCCGCAC +
Preference number: 6 (lower is better)
Translates to: LGIVKMGLNPER*LGGRFPDVAPH
Trigger: GTGCGGCGCCACATCCGGGAAGCGGCCTCCAAGCAACCGCTCCGGGTTGAGGCCCATCTTGACGATTCCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594468.1
ENST00000596341.5
CDS CAA 72 bp CGCCTCCAGCTGTTCCCGTGGCAACGTTCAGGAGCGTaGCCTCGACTTCCGAAGAGGCTGGAAGTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RLQLFPWQRSGA*PRLPKRLEVAA
Trigger: GGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTTGCCACGGGAACAGCTGGAGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CAA 72 bp GAATCGTCAAGATGGGCCTCAACCCGGAGCGGTTGCTaGGAGGCCGCTTCCCGGATGTGGCGCCGCACAACG +
Preference number: 6 (lower is better)
Translates to: ESSRWASTRSGC*EAASRMWRRTT
Trigger: CGTTGTGCGGCGCCACATCCGGGAAGCGGCCTCCAAGCAACCGCTCCGGGTTGAGGCCCATCTTGACGATTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 72 bp TCAAGATGGGCCTGGACGGGCCTGAGAGACCAGGCCTaGCACCCGGCCTATCCGAGGGATGCTCGAACTTCG +
Preference number: 6 (lower is better)
Translates to: SRWAWTGLRDQA*HPAYPRDARTS
Trigger: CGAAGTTCGAGCATCCCTCGGATAGGCCGGGTGTCAGGCCTGGTCTCTCAGGCCCGTCCAGGCCCATCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335841.8
ENST00000594369.6
ENST00000600013.5
ENST00000610298.1
ENST00000622313.4
CDS GCA 72 bp GAGAGACCAGGCCTGACACCCGGCCTATCCGAGGGATaGTCGAACTTCGGGATCTCAACCCGGAGCGGTTGC +
Preference number: 6 (lower is better)
Translates to: ERPGLTPGLSEG*SNFGISTRSGC
Trigger: GCAACCGCTCCGGGTTGAGATCCCGAAGTTCGAGCATCCCTCGGATAGGCCGGGTGTCAGGCCTGGTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600013.5
CDS GCA 72 bp TTGGAATCGTCAAGATGGGCCTCAACCCGGAGCGGTTaGTTGGAGGCCGCTTCCCGGATGTGGCGCCGCACA +
Preference number: 6 (lower is better)
Translates to: LESSRWASTRSG*LEAASRMWRRT
Trigger: TGTGCGGCGCCACATCCGGGAAGCGGCCTCCAAGCAACCGCTCCGGGTTGAGGCCCATCTTGACGATTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 72 bp TGGCGGCCCAGTGGTTTCCTAGGTCGAGTAGTTCGCTaGGACTCGCTTCCAAGTGGACCCGGGAGAGGCGGT +
Preference number: 6 (lower is better)
Translates to: WRPSGFLGRVVR*DSLPSGPGRGG
Trigger: ACCGCCTCTCCCGGGTCCACTTGGAAGCGAGTCCCAGCGAACTACTCGACCTAGGAAACCACTGGGCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CAA 90 bp CCTGAGCCTGGGCTTTCTCCCGCCAGGAGGGTGCGAGGGCCATCTTaGACCTCTGTTAAGCGCCCTAAGGAGGTACCGACGGTTGTGACC +
Preference number: 6 (lower is better)
Translates to: PEPGLSPARRVRGPS*TSVKRPKEVPTVVT
Trigger: GGTCACAACCGTCGGTACCTCCTTAGGGCGCTTAACAGAGGTCAAAGATGGCCCTCGCACCCTCCTGGCGGGAGAAAGCCCAGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CAA 90 bp ATATCCGCCCGCCTCCAGCTGTTCCCGTGGCAACGTTCAGGAGCGTaGCCTCGACTTCCGAAGAGGCTGGAAGTGGCGGCCCAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: ISARLQLFPWQRSGA*PRLPKRLEVAAQWF
Trigger: AAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTTGCCACGGGAACAGCTGGAGGCGGGCGGATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 72 bp GGCTTTCTCCCGCCAGGAGGGTGCGAGGGCCATCTTTaGCCTCTGTTAAGCGCCCTAAGGAGGTACCGACGG +
Preference number: 6 (lower is better)
Translates to: GFLPPGGCEGHL*PLLSALRRYRR
Trigger: CCGTCGGTACCTCCTTAGGGCGCTTAACAGAGGTCAAAGATGGCCCTCGCACCCTCCTGGCGGGAGAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS GCA 72 bp GCTGTGATCCAGCCCAACAGTTGCCCAGGGTCATGCTaGAGTCCTTCGACTAGGGCAGCGGCCTCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: AVIQPNSCPGSC*SPSTRAAASSG
Trigger: TCCTGAGGAGGCCGCTGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000596341.5
ENST00000600013.5
ENST00000610298.1
ENST00000622313.4
CDS GCA 72 bp ACACTCACCCAGCCCAACAGTTGCCCAGGGTCATGCTaGAGTCCTTCGACTAGGGCAGCGGCCTCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: TLTQPNSCPGSC*SPSTRAAASSG
Trigger: TCCTGAGGAGGCCGCTGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACTGTTGGGCTGGGTGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594468.1
CDS CCA 72 bp GGGACCCAGAGGGGATGGCATTCTTGCTCAAGGGGGTaGTCTTGGAATCGTCAAGATGGGCCTGGACGGGCC +
Preference number: 6 (lower is better)
Translates to: GTQRGWHSCSRG*SWNRQDGPGRA
Trigger: GGCCCGTCCAGGCCCATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTCTGGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000600013.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 72 bp CTCAAGGGTGGTCTCTGGGTCCATGACGGGCAGGCATaGGGGACCCAGAGGGGATGGCATTCTTGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: LKGGLWVHDGQA*GTQRGWHSCSR
Trigger: CCTTGAGCAAGAATGCCATCCCCTCTGGGTCCCCCATGCCTGCCCGTCATGGACCCAGAGACCACCCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000594468.1
ENST00000596341.5
ENST00000600013.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 72 bp CCTAGGTCGAGTAGTTCGCTGGGACTCGCTTCCAAGTaGACCCGGGAGAGGCGGTGGTGTAGAAGACCACCC +
Preference number: 6 (lower is better)
Translates to: PRSSSSLGLASK*TRERRWCRRPP
Trigger: GGGTGGTCTTCTACACCACCGCCTCTCCCGGGTCCACTTGGAAGCGAGTCCCAGCGAACTACTCGACCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CAA 72 bp GGGCTTTCTCCCGCCAGGAGGGTGCGAGGGCCATCTTaGACCTCTGTTAAGCGCCCTAAGGAGGTACCGACG +
Preference number: 6 (lower is better)
Translates to: GLSPARRVRGPS*TSVKRPKEVPT
Trigger: CGTCGGTACCTCCTTAGGGCGCTTAACAGAGGTCAAAGATGGCCCTCGCACCCTCCTGGCGGGAGAAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS GCA 72 bp TTCTTGGTGTCCATGGTTCCCCTCAGGGGACTGTGCTaGAAGTGGAGGGCTGGAGGGTGCCACTTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: FLVSMVPLRGLC*KWRAGGCHFLS
Trigger: GGACAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAGGGGAACCATGGACACCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS GCA 72 bp TGGTTCTTGGTGTCCATGGTTCCCCTCAGGGGACTGTaGTGCAAGTGGAGGGCTGGAGGGTGCCACTTCCTG +
Preference number: 6 (lower is better)
Translates to: WFLVSMVPLRGL*CKWRAGGCHFL
Trigger: CAGGAAGTGGCACCCTCCAGCCCTCCACTTGCAGCACAGTCCCCTGAGGGGAACCATGGACACCAAGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 72 bp CCTCGACTTCCGAAGAGGCTGGAAGTGGCGGCCCAGTaGTTTCCTAGGTCGAGTAGTTCGCTGGGACTCGCT +
Preference number: 6 (lower is better)
Translates to: PRLPKRLEVAAQ*FPRSSSSLGLA
Trigger: AGCGAGTCCCAGCGAACTACTCGACCTAGGAAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 72 bp CAGGAGCGTTGCCTCGACTTCCGAAGAGGCTGGAAGTaGCGGCCCAGTGGTTTCCTAGGTCGAGTAGTTCGC +
Preference number: 6 (lower is better)
Translates to: QERCLDFRRGWK*RPSGFLGRVVR
Trigger: GCGAACTACTCGACCTAGGAAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CCA 72 bp ATCCTGGGTGGGTGGAAGGATGTGGAGGCTGGTTCTTaGTGTCCATGGTTCCCCTCAGGGGACTGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: ILGGWKDVEAGS*CPWFPSGDCAA
Trigger: TGCAGCACAGTCCCCTGAGGGGAACCATGGACACCAAGAACCAGCCTCCACATCCTTCCACCCACCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 72 bp GGGACCCAGAGGGGATGGCATTCTTGCTCAAGGGGGTaGTCTTGGAATCGTCAAGATGGGCCTCAACCCGGA +
Preference number: 6 (lower is better)
Translates to: GTQRGWHSCSRG*SWNRQDGPQPG
Trigger: TCCGGGTTGAGGCCCATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTCTGGGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594468.1
ENST00000596341.5
CDS CAA 72 bp CCAGAGGGGATGGCATTCTTGCTCAAGGGGGTGGTCTaGGAATCGTCAAGATGGGCCTGGACGGGCCTGAGA +
Preference number: 6 (lower is better)
Translates to: PEGMAFLLKGVV*ESSRWAWTGLR
Trigger: TCTCAGGCCCGTCCAGGCCCATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000600013.5
ENST00000610298.1
ENST00000622313.4
CDS CAA 72 bp CCAGAGGGGATGGCATTCTTGCTCAAGGGGGTGGTCTaGGAATCGTCAAGATGGGCCTCAACCCGGAGCGGT +
Preference number: 6 (lower is better)
Translates to: PEGMAFLLKGVV*ESSRWASTRSG
Trigger: ACCGCTCCGGGTTGAGGCCCATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594468.1
ENST00000596341.5
CDS CAA 90 bp ATGGTCTCCCTCCGCTCTGAGAGCAGCTCTTCCCGGGTTATAAACTaGCGCGTCTGTACAGTGGGCCGGTTTCTATTGGCAGGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: MVSLRSESSSSRVIN*RVCTVGRFLLAGEG
Trigger: CCCCTCACCTGCCAATAGAAACCGGCCCACTGTACAGACGCGCAAGTTTATAACCCGGGAAGAGCTGCTCTCAGAGCGGAGGGAGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 72 bp GTCCATCGACATTGGGCTCCTCCTTCACACTGCAGCTaGGCTGGACAGACCCCTCTATTCTGGTGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: VHRHWAPPSHCS*AGQTPLFWCPG
Trigger: CCCAGGACACCAGAATAGAGGGGTCTGTCCAGCTCAGCTGCAGTGTGAAGGAGGAGCCCAATGTCGATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000594468.1
ENST00000596341.5
ENST00000610298.1
ENST00000622313.4
CDS GCA 72 bp TGCTTCAGGACATGGGCTGTGATCCAGCCCAACAGTTaGCCAGGGTCATGCTGCAGTCCTTCGACTAGGGCA +
Preference number: 6 (lower is better)
Translates to: CFRTWAVIQPNS*PGSCCSPSTRA
Trigger: TGCCCTAGTCGAAGGACTGCAGCATGACCCTGGGCAACTGTTGGGCTGGATCACAGCCCATGTCCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335841.8
ENST00000391694.4
ENST00000594369.6
ENST00000596341.5
ENST00000600013.5
ENST00000610298.1
ENST00000622313.4
CDS CCA 72 bp CAGAGGGGATGGCATTCTTGCTCAAGGGGGTGGTCTTaGAATCGTCAAGATGGGCCTCAACCCGGAGCGGTT +
Preference number: 6 (lower is better)
Translates to: QRGWHSCSRGWS*NRQDGPQPGAV
Trigger: AACCGCTCCGGGTTGAGGCCCATCTTGACGATTCCAAGACCACCCCCTTGAGCAAGAATGCCATCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594468.1
ENST00000596341.5
CDS CCA 72 bp AACGTTCAGGAGCGTTGCCTCGACTTCCGAAGAGGCTaGAAGTGGCGGCCCAGTGGTTTCCTAGGTCGAGTA +
Preference number: 6 (lower is better)
Translates to: NVQERCLDFRRG*KWRPSGFLGRV
Trigger: TACTCGACCTAGGAAACCACTGGGCCGCCACTTCCAGCCTCTTCGGAAGTCGAGGCAACGCTCCTGAACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 72 bp TCTCTCGCCTGCACCGAAGGCACCGCCCATGCCCTTTaGACTACATTTCCCATGAGCATCAGCAAGACAGGC +
Preference number: 6 (lower is better)
Translates to: SLACTEGTAHAL*TTFPMSISKTG
Trigger: GCCTGTCTTGCTGATGCTCATGGGAAATGTAGTTCAAAGGGCATGGGCGGTGCCTTCGGTGCAGGCGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 72 bp CCTCTGTTAAGCGCCCTAAGGAGGTACCGACGGTTGTaGCCGCAGTCTCTGACGTCTTCAGATGTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: PLLSALRRYRRL*PQSLTSSDVSP
Trigger: AGGACTGACATCTGAAGACGTCAGAGACTGCGGTCACAACCGTCGGTACCTCCTTAGGGCGCTTAACAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS CAA 72 bp CTCCGCTCTGAGAGCAGCTCTTCCCGGGTTATAAACTaGCGCGTCTGTACAGTGGGCCGGTTTCTATTGGCA +
Preference number: 6 (lower is better)
Translates to: LRSESSSSRVIN*RVCTVGRFLLA
Trigger: TGCCAATAGAAACCGGCCCACTGTACAGACGCGCAAGTTTATAACCCGGGAAGAGCTGCTCTCAGAGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS GCA 72 bp TCGGGGGTGGAGGTTTCCCTCCAGGCTGATCGGACATaGTCAACCGTTTATTTACCTTTGAATTTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: SGVEVSLQADRT*STVYLPLNLGS
Trigger: GCTCCCCAAATTCAAAGGTAAATAAACGGTTGAGCATGTCCGATCAGCCTGGAGGGAAACCTCCACCCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596341.5
CDS TCA 72 bp TCCTACAAAGTCGGGGGTGGAGGTTTCCCTCCAGGCTaGTCGGACATGCTCAACCGTTTATTTACCTTTGAA +
Preference number: 6 (lower is better)
Translates to: SYKVGGGGFPPG*SDMLNRLFTFE
Trigger: TTCAAAGGTAAATAAACGGTTGAGCATGTCCGATCAGCCTGGAGGGAAACCTCCACCCCCGACTTTGTAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596341.5