RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF445 (Homo sapiens)

Ensembl gene IDs: ENSG00000185219

Ensembl transcript IDs: ENST00000396077.8, ENST00000425708.6, ENST00000460529.1, ENST00000474600.1, ENST00000617032.1, ENST00000634579.1, ENST00000634815.1, ENST00000634915.1, ENST00000635138.1, ENST00000635479.2

Found 1677 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATCAGGCAGGACTGGCTTCACAGGCAGGCAGCCTGGGCAGCCCTaGGGGGCCCCACACTTAGAATGGCCTCCGCCTGCTATCTTGCTC +
Preference number: 1 (lower is better)
Translates to: PSGRTGFTGRQPGQP*GAPHLEWPPPAILL
Trigger: GAGCAAGATAGCAGGCGGAGGCCATTCTAAGTGTGGGGCCCCGCAGGGCTGCCCAGGCTGCCTGCCTGTGAAGCCAGTCCTGCCTGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp GCACACACCTGTAGCCCCAGCTACTCGGGAGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCTGCAGTAAGCTGTGATCCTGCCACT +
Preference number: 1 (lower is better)
Translates to: AHTCSPSYSGGSDGT*AWEVKAAVSCDPAT
Trigger: AGTGGCAGGATCACAGCTTACTGCAGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCCTCCCGAGTAGCTGGGGCTACAGGTGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp CTCATTGTGACCCTCCCTTCTGCTCCCTGCCCCAGCATTAGTAGCTaGGACCTCTCCACAGAAGCACAGATCCAAAGGCCACAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: LIVTLPSAPCPSISS*DLSTEAQIQRPQGP
Trigger: GGGGCCCTGTGGCCTTTGGATCTGTGCTTCTGTGGAGAGGTCCCAGCTACTAATGCTGGGGCAGGGAGCAGAAGGGAGGGTCACAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp ACCTCTCCACAGAAGCACAGATCCAAAGGCCACAGGGCCCCTCCCTaGGCACAGACACTATGTCAGCCCAGCAGTCCACTCCTCCACCAT +
Preference number: 1 (lower is better)
Translates to: TSPQKHRSKGHRAPP*AQTLCQPSSPLLHH
Trigger: ATGGTGGAGGAGTGGACTGCTGGGCTGACATAGTGTCTGTGCTCAGGGAGGGGCCCTGTGGCCTTTGGATCTGTGCTTCTGTGGAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp GATGGGGTTTCACCATATTGGCCAGGCTGGCTGGTCTCAATCTCCTaGTCTCGTGATCTGCCCGCCTCAGCCTCCCGAGTAGCTGGGACT +
Preference number: 1 (lower is better)
Translates to: DGVSPYWPGWLVSIS*SRDLPASASRVAGT
Trigger: AGTCCCAGCTACTCGGGAGGCTGAGGCGGGCAGATCACGAGATCAGGAGATTGAGACCAGCCAGCCTGGCCAATATGGTGAAACCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp AAACAGATGGACCGCTGCTGCCTATGCAGGCCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGAGATCCACACGCCAAGCGCTTGAGC +
Preference number: 1 (lower is better)
Translates to: KQMDRCCLCRPVGWG*QQGTGRDPHAKRLS
Trigger: GCTCAAGCGCTTGGCGTGTGGATCTCTACCAGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp GCACCTGGCAAAATAGCCGGTCCTGATCAGGTCTCAAGGCAGCCCTaGACTTTGGAAGGCAGCACTGACGCCCCACTGAGGAAAGGAATG +
Preference number: 1 (lower is better)
Translates to: APGKIAGPDQVSRQP*TLEGSTDAPLRKGM
Trigger: CATTCCTTTCCTCAGTGGGGCGTCAGTGCTGCCTTCCAAAGTCCAGGGCTGCCTTGAGACCTGATCAGGACCGGCTATTTTGCCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp AGCGCCTGGTGTATGGGAGTGCTCAGCACATTTCTGTTAAACAGATaGACCGCTGCTGCCTATGCAGGCCTGTGGGATGGGGATGGCAAC +
Preference number: 1 (lower is better)
Translates to: SAWCMGVLSTFLLNR*TAAAYAGLWDGDGN
Trigger: GTTGCCATCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAATGTGCTGAGCACTCCCATACACCAGGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp CACTCCAGTCCTCCAACATCCCAGCTTCCCTCTTACATCCCTGAATaGCAGAACCCAACAAGGAACCAGCTGGCGAAGCAGCATCGTGCC +
Preference number: 1 (lower is better)
Translates to: HSSPPTSQLPSYIPE*QNPTRNQLAKQHRA
Trigger: GGCACGATGCTGCTTCGCCAGCTGGTTCCTTGTTGGGTTCTGCCATTCAGGGATGTAAGAGGGAAGCTGGGATGTTGGAGGACTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp AGTCAGTCTTGGTCAGCAGGGGTGGGGCAGACCACACTGAACAGGTaGCAGAAAGACCTTCAAATACCCACTCCAGCCATCTGGCTCTCC +
Preference number: 1 (lower is better)
Translates to: SQSWSAGVGQTTLNR*QKDLQIPTPAIWLS
Trigger: GGAGAGCCAGATGGCTGGAGTGGGTATTTGAAGGTCTTTCTGTCACCTGTTCAGTGTGGTCTGCCCCACCCCTGCTGACCAAGACTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp AGAGTGGGAAAGTGGAGAACCATCAGCTCACTTTCCCTCACGCCATaGCAAAAGCATCTCCATCAGGCAGGACTGGCTTCACAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: RVGKWRTISSLSLTP*QKHLHQAGLASQAG
Trigger: GCCTGCCTGTGAAGCCAGTCCTGCCTGATGGAGATGCTTTTGCCATGGCGTGAGGGAAAGTGAGCTGATGGTTCTCCACTTTCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp TATGGGAGTGCTCAGCACATTTCTGTTAAACAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGATGGGGATGGCAACAGGGTACTGGT +
Preference number: 1 (lower is better)
Translates to: YGSAQHISVKQMDRC*LCRPVGWGWQQGTG
Trigger: ACCAGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAATGTGCTGAGCACTCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp GTGTATGGGAGTGCTCAGCACATTTCTGTTAAACAGATGGACCGCTaGTGCCTATGCAGGCCTGTGGGATGGGGATGGCAACAGGGTACT +
Preference number: 1 (lower is better)
Translates to: VYGSAQHISVKQMDR*CLCRPVGWGWQQGT
Trigger: AGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAATGTGCTGAGCACTCCCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp CCAAGATGGCAGGATTTTCATCTGTTCTGGTCCCTGCTGGGTCTCTaGCAAACACACCAGCGCCTGGTGTATGGGAGTGCTCAGCACATT +
Preference number: 1 (lower is better)
Translates to: PRWQDFHLFWSLLGL*QTHQRLVYGSAQHI
Trigger: AATGTGCTGAGCACTCCCATACACCAGGCGCTGGTGTGTTTGCCAGAGACCCAGCAGGGACCAGAACAGATGAAAATCCTGCCATCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp CCTCCCAGGTTCAAACGATTCTCCTGTCTCAGCCTCCCCAGTAGCTaGGATTTACAGGTGCCCGCTACCACGCCTGGCTACTTTTGTATT +
Preference number: 1 (lower is better)
Translates to: PPRFKRFSCLSLPSS*DLQVPATTPGYFCI
Trigger: AATACAAAAGTAGCCAGGCGTGGTAGCGGGCACCTGTAAATCCCAGCTACTGGGGAGGCTGAGACAGGAGAATCGTTTGAACCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp ACTTTTCCATGGTTACAACACCAACTGACATGGAAGCTGCACCTCTaGGAGGGCCCTGGTCCTAGAGGTCAACCACCTGATGGAGAGCCT +
Preference number: 1 (lower is better)
Translates to: TFPWLQHQLTWKLHL*EGPGPRGQPPDGEP
Trigger: AGGCTCTCCATCAGGTGGTTGACCTCTAGGACCAGGGCCCTCTCAGAGGTGCAGCTTCCATGTCAGTTGGTGTTGTAACCATGGAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp GCCCAGTGGCACCTGCTGTGGAGCAGGATTAGTAGATGGTGTGCATaGACTCTGAAGGCAGTCTGCGGAAGAATTCTCTCTTGCCTGAGA +
Preference number: 1 (lower is better)
Translates to: AQWHLLWSRISRWCA*TLKAVCGRILSCLR
Trigger: TCTCAGGCAAGAGAGAATTCTTCCGCAGACTGCCTTCAGAGTTCATGCACACCATCTACTAATCCTGCTCCACAGCAGGTGCCACTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp AGGGTGGATGAGCAGGCTGGAGAACCAGGAGAATACATATTCCAGTaGGAGCCCAGTGGCACCTGCTGTGGAGCAGGATTAGTAGATGGT +
Preference number: 1 (lower is better)
Translates to: RVDEQAGEPGEYIFQ*EPSGTCCGAGLVDG
Trigger: ACCATCTACTAATCCTGCTCCACAGCAGGTGCCACTGGGCTCTCACTGGAATATGTATTCTCCTGGTTCTCCAGCCTGCTCATCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp ATCTGTTCTGGTCCCTGCTGGGTCTCTGGCAAACACACCAGCGCCTaGTGTATGGGAGTGCTCAGCACATTTCTGTTAAACAGATGGACC +
Preference number: 1 (lower is better)
Translates to: ICSGPCWVSGKHTSA*CMGVLSTFLLNRWT
Trigger: GGTCCATCTGTTTAACAGAAATGTGCTGAGCACTCCCATACACCAGGCGCTGGTGTGTTTGCCAGAGACCCAGCAGGGACCAGAACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp CTCCTCTGCCTGCAACTCTCCCTAGAGAGCTACCTGCTACCTCCCTaGCTTCCTTCACGTCTTTGCTCACATTTCACCTTCTCAGTTGAG +
Preference number: 1 (lower is better)
Translates to: LLCLQLSLESYLLPP*LPSRLCSHFTFSVE
Trigger: CTCAACTGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAGCCAGGGAGGTAGCAGGTAGCTCTCTAGGGAGAGTTGCAGGCAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp AGAGTCTGGGGCAGCCAGACTTTATGTTCTCCTCAGGTCTTCAGGTaGTTGGATGAAGCCCACCCACAGATAGAGGGCAATCTGCTTTCC +
Preference number: 1 (lower is better)
Translates to: RVWGSQTLCSPQVFR*LDEAHPQIEGNLLS
Trigger: GGAAAGCAGATTGCCCTCTATCTGTGGGTGGGCTTCATCCAATCACCTGAAGACCTGAGGAGAACATAAAGTCTGGCTGCCCCAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp CAGGCAGACATCACAGATCTCTGTGGGTCAGACCATTCAGGATCCTaGTTTGGCTGCACTGTCCATGGCAGTCACCACACCAATTGTGTT +
Preference number: 1 (lower is better)
Translates to: QADITDLCGSDHSGS*FGCTVHGSHHTNCV
Trigger: AACACAATTGGTGTGGTGACTGCCATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTGTGATGTCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp GGTCTGGCTATGGAGATGGGCATAACCAAAAACACAAACATCACCTaGCATAGGAACCAAGAGAGGTGGGGCCACGGGTTTAGAGGCACA +
Preference number: 1 (lower is better)
Translates to: GLAMEMGITKNTNIT*HRNQERWGHGFRGT
Trigger: TGTGCCTCTAAACCCGTGGCCCCACCTCTCTTGGTTCCTATGTCAGGTGATGTTTGTGTTTTTGGTTATGCCCATCTCCATAGCCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp TACATTTCAGTCAGTCTTGGTCAGCAGGGGTGGGGCAGACCACACTaGACAGGTGACAGAAAGACCTTCAAATACCCACTCCAGCCATCT +
Preference number: 1 (lower is better)
Translates to: YISVSLGQQGWGRPH*TGDRKTFKYPLQPS
Trigger: AGATGGCTGGAGTGGGTATTTGAAGGTCTTTCTGTCACCTGTTCAGTGTGGTCTGCCCCACCCCTGCTGACCAAGACTGACTGAAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp CTCAGCAGGCCAGCTTTGCAACATCCTAACAAGGAGACGGGAAACTaGAGTACCACAGGAAGGAGATACTCTCCATCTCTCACCACCCAA +
Preference number: 1 (lower is better)
Translates to: LSRPALQHPNKETGN*STTGRRYSPSLTTQ
Trigger: TTGGGTGGTGAGAGATGGAGAGTATCTCCTTCCTGTGGTACTTCAGTTTCCCGTCTCCTTGTTAGGATGTTGCAAAGCTGGCCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp CAGGGTTTGCACAGTTTGAACTTCCCCTCTGACGCAAAGAGGAAGTaGCTGGGCTTTCTTATCAGCTTGTCCAGATCCAGGCAAACTGAG +
Preference number: 1 (lower is better)
Translates to: QGLHSLNFPSDAKRK*LGFLISLSRSRQTE
Trigger: CTCAGTTTGCCTGGATCTGGACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp GGAAGGGTTGGAAGGAAACTGAATGTTCTCCAGGCCAGGATGAGATaGAAGATGAGACCTGGTGCTCAGGGCAATCAGAAACTGTCAACT +
Preference number: 1 (lower is better)
Translates to: GRVGRKLNVLQARMR*KMRPGAQGNQKLST
Trigger: AGTTGACAGTTTCTGATTGCCCTGAGCACCAGGTCTCATCTTGCATCTCATCCTGGCCTGGAGAACATTCAGTTTCCTTCCAACCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp CCTCCTATCTCATCCCATGACTTGGAATGCCTAACCTCCTGGGAATaGAGCCCAGTAGGTCTCAGCCTTATTTTACCCAGTTCCCTATTC +
Preference number: 1 (lower is better)
Translates to: PPISSHDLECLTSWE*SPVGLSLILPSSLF
Trigger: GAATAGGGAACTGGGTAAAATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCCAAGTCATGGGATGAGATAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp AGACATCACAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTaGCTGCACTGTCCATGGCAGTCACCACACCAATTGTGTTTTTGG +
Preference number: 1 (lower is better)
Translates to: RHHRSLWVRPFRILL*LHCPWQSPHQLCFW
Trigger: CCAAAAACACAATTGGTGTGGTGACTGCCATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTGTGATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp TTCCCTCTTACATCCCTGAATGGCAGAACCCAACAAGGAACCAGCTaGCGAAGCAGCATCGTGCCTGTTCTTTGTTGCCTGTGTTTTTCA +
Preference number: 1 (lower is better)
Translates to: FPLTSLNGRTQQGTS*RSSIVPVLCCLCFS
Trigger: TGAAAAACACAGGCAACAAAGAACAGGCACGATGCTGCTTCGCCAGCTGGTTCCTTGTTGGGTTCTGCCATTCAGGGATGTAAGAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp GGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTTACTGAGTCCTTGGATCTGTGGTTA +
Preference number: 1 (lower is better)
Translates to: GEESDLWELAARLTA*EAFHPFTESLDLWL
Trigger: TAACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp GCCGAGGATCCTATAGAAAATTCAGAAACGGAGTGGGGAGGAGTCTaGTTTATGGGAACTGGCAGCAAGGCTAACTGCATGAGAAGCCTT +
Preference number: 1 (lower is better)
Translates to: AEDPIENSETEWGGV*FMGTGSKANCMRSL
Trigger: AAGGCTTCTCATGCAGTTAGCCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTTCTATAGGATCCTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp TTTGTCATCTGTAAAGATCCAAGATGGCAGGATTTTCATCTGTTCTaGTCCCTGCTGGGTCTCTGGCAAACACACCAGCGCCTGGTGTAT +
Preference number: 1 (lower is better)
Translates to: FVICKDPRWQDFHLF*SLLGLWQTHQRLVY
Trigger: ATACACCAGGCGCTGGTGTGTTTGCCAGAGACCCAGCAGGGACCAGAACAGATGAAAATCCTGCCATCTTGGATCTTTACAGATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp AAATCACGACTGATCTCCCAATCCAGCACTCCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACACACATCACCATCCAGAATACTGCG +
Preference number: 1 (lower is better)
Translates to: KSRLISQSSTPSALL*FTLSTTHITIQNTA
Trigger: CGCAGTATTCTGGATGGTGATGTGTGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGGAGTGCTGGATTGGGAGATCAGTCGTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp TGTCATTCTCCAAGATCCATCTGTCTTCTGCACAGGCTGAGTAGGTaGGCTAAGTGGAGATGTGTTCCCGTCTTTGATGGTGGCACTAAT +
Preference number: 1 (lower is better)
Translates to: CHSPRSICLLHRLSR*AKWRCVPVFDGGTN
Trigger: ATTAGTGCCACCATCAAAGACGGGAACACATCTCCACTTAGCTCACCTACTCAGCCTGTGCAGAAGACAGATGGATCTTGGAGAATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp TCATTGACTTGCTCAAGATCAATCCTGCCAAGAAAAGGCACACCATaGCTGGAACCCAGATCTGATGACTCCAAGACCCTTCCTATGACT +
Preference number: 1 (lower is better)
Translates to: SLTCSRSILPRKGTP*LEPRSDDSKTLPMT
Trigger: AGTCATAGGAAGGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGCAAGTCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp ACTGCAACCTGCTTTATCAGCAAGGTCTTTGTGGCCTGGATCTTGTaGCAATCTCCTATCTCATCCCGTGACTTAGAATGCCTTAACCGT +
Preference number: 1 (lower is better)
Translates to: TATCFISKVFVAWIL*QSPISSRDLECLNR
Trigger: ACGGTTAAGGCATTCTAAGTCACGGGATGAGATAGGAGATTGGCACAAGATCCAGGCCACAAAGACCTTGCTGATAAAGCAGGTTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp CCGTCTTGGTTTTGGTGGGTTTTAGCTGGCTTCTTTACTGCAACCTaGTTTATCAGCAAGGTCTTTGTGGCCTGGATCTTGTGCCAATCT +
Preference number: 1 (lower is better)
Translates to: PSWFWWVLAGFFTAT*FISKVFVAWILCQS
Trigger: AGATTGGCACAAGATCCAGGCCACAAAGACCTTGCTGATAAAGCAGGTTGCAGTAAAGAAGCCAGCTAAAACCCACCAAAACCAAGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp AGAGGCTGGTTATCCCAGAAAAGTCTAATTATTTGCCCTTCCCAATaGACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGGGAGGC +
Preference number: 1 (lower is better)
Translates to: RGWLSQKSLIICPSQ*TITLINGLGCLWGG
Trigger: GCCTCCCCAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATAATTAGACTTTTCTGGGATAACCAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp TTCACATGGCACTTCTCTAGGATGCATCCAGGAGTAGTTGCTGGGTaGTTAAGTGCACACAACCTTCCAAGATTTTGCAAATTGCCTGGC +
Preference number: 1 (lower is better)
Translates to: FTWHFSRMHPGVVAG*LSAHNLPRFCKLPG
Trigger: GCCAGGCAATTTGCAAAATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCAACTACTCCTGGATGCATCCTAGAGAAGTGCCATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp CCAGAGGTCATTCTCATCACCGTCTTGGTTTTGGTGGGTTTTAGCTaGCTTCTTTACTGCAACCTGCTTTATCAGCAAGGTCTTTGTGGC +
Preference number: 1 (lower is better)
Translates to: PEVILITVLVLVGFS*LLYCNLLYQQGLCG
Trigger: GCCACAAAGACCTTGCTGATAAAGCAGGTTGCAGTAAAGAAGCCAGCTAAAACCCACCAAAACCAAGACGGTGATGAGAATGACCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp AAATTCTGCTCATGGATTCATCCCTGCAGTAGGTTCATTTTCAGGTaGAAGTGTAGGAAGCACAGGAGATCACAGAAGACCTCAGCAGGC +
Preference number: 1 (lower is better)
Translates to: KFCSWIHPCSRFIFR*KCRKHRRSQKTSAG
Trigger: GCCTGCTGAGGTCTTCTGTGATCTCCTGTGCTTCCTACACTTCCACCTGAAAATGAACCTACTGCAGGGATGAATCCATGAGCAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp TGGCTTATAGAATTAAGGAGGCTGGCAAGTCCCAAATCTTCAGGGTaGATGAGCAGGCTGGAGAACCAGGAGAATACATATTCCAGTGAG +
Preference number: 1 (lower is better)
Translates to: WLIELRRLASPKSSG*MSRLENQENTYSSE
Trigger: CTCACTGGAATATGTATTCTCCTGGTTCTCCAGCCTGCTCATCCACCCTGAAGATTTGGGACTTGCCAGCCTCCTTAATTCTATAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp AAAACTTTAGTAGGCAGCCCATCCATTTCAGTTCTCAGGACACTATaGTCAGCAGGCAGACATCACAGATCTCTGTGGGTCAGACCATTC +
Preference number: 1 (lower is better)
Translates to: KTLVGSPSISVLRTL*SAGRHHRSLWVRPF
Trigger: GAATGGTCTGACCCACAGAGATCTGTGATGTCTGCCTGCTGATCATAGTGTCCTGAGAACTGAAATGGATGGGCTGCCTACTAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp AATCCAATTGTCATTCTCCAAGATCCATCTGTCTTCTGCACAGGCTaGGTAGGTGAGCTAAGTGGAGATGTGTTCCCGTCTTTGATGGTG +
Preference number: 1 (lower is better)
Translates to: NPIVILQDPSVFCTG*VGELSGDVFPSLMV
Trigger: CACCATCAAAGACGGGAACACATCTCCACTTAGCTCACCTACTCAGCCTGTGCAGAAGACAGATGGATCTTGGAGAATGACAATTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp CACATGCTGTTTTATTGGCAAGGTCTTTATGACTGTATCTTGTGCTaGCCTCCTATCTCATCCCATGACTTGGAATGCCTAACCTCCTGG +
Preference number: 1 (lower is better)
Translates to: HMLFYWQGLYDCILC*PPISSHDLECLTSW
Trigger: CCAGGAGGTTAGGCATTCCAAGTCATGGGATGAGATAGGAGGTCAGCACAAGATACAGTCATAAAGACCTTGCCAATAAAACAGCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp ATAATGTTTGATCAAATACCTGGGGACCTTGTGGCTCAGCCAAGTTaGCACCTAAAATTTACCCTCACACTCCAGTCCTCCAACATCCCA +
Preference number: 1 (lower is better)
Translates to: IMFDQIPGDLVAQPS*HLKFTLTLQSSNIP
Trigger: TGGGATGTTGGAGGACTGGAGTGTGAGGGTAAATTTTAGGTGTCAACTTGGCTGAGCCACAAGGTCCCCAGGTATTTGATCAAACATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp GAATACTGCGTATCCCATTTGTTTGTCATCTGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTCTGGTCCCTGCTGGGTCTCTGGCAA +
Preference number: 1 (lower is better)
Translates to: EYCVSHLFVICKDPR*QDFHLFWSLLGLWQ
Trigger: TTGCCAGAGACCCAGCAGGGACCAGAACAGATGAAAATCCTGCCATCTTGGATCTTTACAGATGACAAACAAATGGGATACGCAGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp TACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGTTaGGGGGATTTCTTCAGTATCATCCTTTCTGTGGTTTGCCAGAAA +
Preference number: 1 (lower is better)
Translates to: YPKSSNQCCSLFLWG*GDFFSIILSVVCQK
Trigger: TTTCTGGCAAACCACAGAAAGGATGATACTGAAGAAATCCCCCCAACCCCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp CCTCCCCAAATCCATCAGGTCTCCTGCCTTAGGAAGGCAGAATGGTaGCTTGCACACATCGTTCCAATACATGATTTTATACTCATTTCA +
Preference number: 1 (lower is better)
Translates to: PPQIHQVSCLRKAEW*LAHIVPIHDFILIS
Trigger: TGAAATGAGTATAAAATCATGTATTGGAACGATGTGTGCAAGTCACCATTCTGCCTTCCTAAGGCAGGAGACCTGATGGATTTGGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp TTCAGTGAAAGGACGAACAAGTGGCTCTGGTTTTTGTTGTGGTTATaGGAGCTCAGTGCATTTGACAGTCAGGGTTTGCACAGTTTGAAC +
Preference number: 1 (lower is better)
Translates to: FSERTNKWLWFLLWL*ELSAFDSQGLHSLN
Trigger: GTTCAAACTGTGCAAACCCTGACTGTCAAATGCACTGAGCTCTCATAACCACAACAAAAACCAGAGCCACTTGTTCGTCCTTTCACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp CATCCTGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTaGTCATGGCAATCCAGAGCAGGTAAGATTATTCCATACTCTACT +
Preference number: 1 (lower is better)
Translates to: HPVTPPHNIRAFIFT*SWQSRAGKIIPYST
Trigger: AGTAGAGTATGGAATAATCTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp CCTTTGGGGAGGCCTAGGAAGATAAAAAGTATAAATTATTGTCAGTaGAGCAGGGTCCTACTTCAAAGGGACCTGGCCTATCCTTTATTC +
Preference number: 1 (lower is better)
Translates to: PLGRPRKIKSINYCQ*SRVLLQRDLAYPLF
Trigger: GAATAAAGGATAGGCCAGGTCCCTTTGAAGTAGGACCCTGCTGCACTGACAATAATTTATACTTTTTATCTTCCTAGGCCTCCCCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp CCCATTGATCACCTGACCTCCATACACTCTTACTCTGAGGAACCATaGTGGCATTTTGAGTCTCCTGTAATTACTGCTAGTTCAGAACTA +
Preference number: 1 (lower is better)
Translates to: PIDHLTSIHSYSEEP*WHFESPVITASSEL
Trigger: TAGTTCTGAACTAGCAGTAATTACAGGAGACTCAAAATGCCACCATGGTTCCTCAGAGTAAGAGTGTATGGAGGTCAGGTGATCAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 90 bp AAGCACTCTAACTTCACACATAAGGAAATTGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCCTGCCAAGAAAAGGCACACCATGCC +
Preference number: 1 (lower is better)
Translates to: KHSNFTHKEIDAEVH*LAQDQSCQEKAHHA
Trigger: GGCATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGCAAGTCAATGAACCTCTGCATCAATTTCCTTATGTGTGAAGTTAGAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp CTAAGCCTCACTGTTCTTTTCATCTTTCCTGCTGAGACAGGAGATTaGGGATGTGGACATTTTGTTGAGGAAAGAAATAGGACAGACAAC +
Preference number: 1 (lower is better)
Translates to: LSLTVLFIFPAETGD*GCGHFVEERNRTDN
Trigger: GTTGTCTGTCCTATTTCTTTCCTCAACAAAATGTCCACATCCTCAATCTCCTGTCTCAGCAGGAAAGATGAAAAGAACAGTGAGGCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp TCTCTGATTCACTTTGTCCACTACACACATCACCATCCAGAATACTaGGTATCCCATTTGTTTGTCATCTGTAAAGATCCAAGATGGCAG +
Preference number: 1 (lower is better)
Translates to: SLIHFVHYTHHHPEY*VSHLFVICKDPRWQ
Trigger: CTGCCATCTTGGATCTTTACAGATGACAAACAAATGGGATACGCAGTATTCTGGATGGTGATGTGTGTAGTGGACAAAGTGAATCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp CCCATCTCCTCACTGGACAGCCTTGTGAATAATTCTTCTCTCTTTTaGAAAACCCATGTCACAGTGATTGATTTACTGTGTGAGAACAGA +
Preference number: 1 (lower is better)
Translates to: PISSLDSLVNNSSLF*KTHVTVIDLLCENR
Trigger: TCTGTTCTCACACAGTAAATCAATCACTGTGACATGGGTTTTGCAAAAGAGAGAAGAATTATTCACAAGGCTGTCCAGTGAGGAGATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp TCAAATCCTTGGGATTCTGTCACTAGCTTCCAAAACAGAAAGGGCTaGGCCCTTTATCAAAGTTACTCCACAATGCCTATAATTAAGGGT +
Preference number: 1 (lower is better)
Translates to: SNPWDSVTSFQNRKG*ALYQSYSTMPIIKG
Trigger: ACCCTTAATTATAGGCATTGTGGAGTAACTTTGATAAAGGGCCCAGCCCTTTCTGTTTTGGAAGCTAGTGACAGAATCCCAAGGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 90 bp GTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATaGCAATCCAGAGCAGGTAAGATTATTCCATACTCTACTGAAAAA +
Preference number: 1 (lower is better)
Translates to: VTPPHNIRAFIFTCS*QSRAGKIIPYSTEK
Trigger: TTTTTCAGTAGAGTATGGAATAATCTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp TTGCCTGGCACAATATTTCTCACAATTTCTACTCATAAAGCAGTGTaGATTATCGTTGTTCCACGCACTTACCCACACTTGGGCTTTCAA +
Preference number: 1 (lower is better)
Translates to: LPGTIFLTISTHKAV*IIVVPRTYPHLGFQ
Trigger: TTGAAAGCCCAAGTGTGGGTAAGTGCGTGGAACAACGATAATTCACACTGCTTTATGAGTAGAAATTGTGAGAAATATTGTGCCAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 90 bp TACAGTATAATTACAGCAGTGAGGACAACCAGAGGTCACTTTCATTaGCATCTTGGTTTTGACCGGCTTCTTTACCACATGCTGTTTTAT +
Preference number: 1 (lower is better)
Translates to: YSIITAVRTTRGHFH*HLGFDRLLYHMLFY
Trigger: ATAAAACAGCATGTGGTAAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCTGGTTGTCCTCACTGCTGTAATTATACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 90 bp AAACATTATTTGCCCTTAGCCATGTTGTGGGTTTATTTCCTACACTaGGTCATATTATGTGTCTTCCAACATGTCTGGAGCAGTTGCTAC +
Preference number: 1 (lower is better)
Translates to: KHYLPLAMLWVYFLH*VILCVFQHVWSSCY
Trigger: GTAGCAACTGCTCCAGACATGTTGGAAGACACATAATATGACTCAGTGTAGGAAATAAACCCACAACATGGCTAAGGGCAAATAATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 90 bp AATTATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTaGGTGCCTTTGGGGAGGCCTAGGAAGATAAAAAGTATAAATTAT +
Preference number: 1 (lower is better)
Translates to: NYLPFPMHNHSDKWP*VPLGRPRKIKSINY
Trigger: ATAATTTATACTTTTTATCTTCCTAGGCCTCCCCAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp CAGAATTACTTTTACTGTATGGATCAGGGAACTAGTGTGGGATTCTaGCCATTGTTGACTATGTCTATTCTAATTACGCATTCTAGAACC +
Preference number: 1 (lower is better)
Translates to: QNYFYCMDQGTSVGF*PLLTMSILITHSRT
Trigger: GGTTCTAGAATGCGTAATTAGAATAGACATAGTCAACAATGGGCAGAATCCCACACTAGTTCCCTGATCCATACAGTAAAAGTAATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 90 bp GACCAAAAACAACCCATTTATTTATCCATTCTTCTGCTGATGAAATaGAGGCTTTTCCCAATCTTGCTACCTAAACAATACTTCAGTGAA +
Preference number: 1 (lower is better)
Translates to: DQKQPIYLSILLLMK*RLFPILLPKQYFSE
Trigger: TTCACTGAAGTATTGTTTAGGTAGCAAGATTGGGAAAAGCCTGCATTTCATCAGCAGAAGAATGGATAAATAAATGGGTTGTTTTTGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCAACAGGAGACTTCTaGCCCGCCCCCACCATCCTG +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPTGDF*PAPTIL
Trigger: CAGGATGGTGGGGGCGGGGCAGAAGTCTCCTGTTGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCAGGAGGCAGAGCTTaGAGTGAGCGGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPGGRA*SERRSR
Trigger: GCGCGATCTCCGCTCACTGCAAGCTCTGCCTCCTGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGCAGGAGAATGGTGTaGGCCCAGGAGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGRRMV*AQEAEL
Trigger: AAGCTCTGCCTCCTGGGCTCACACCATTCTCCTGCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGGCATGAGCCATCGTaGCAGGCCTGCCATGGCGTT +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPRHEPS*QACHGV
Trigger: AACGCCATGGCAGGCCTGGCACGATGGCTCATGCCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCACACGCCAAGCGCTTaGGCCCAGCATCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPHTPSA*AQHPAL
Trigger: GAGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTCCCTGCCTCCCTCTaGGCCAGCTCAAGCCCCCGT +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLPASL*ASSSPR
Trigger: ACGGGGGCTTGAGCTGGCTCAGAGGGAGGCAGGGAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTCCCTGCCTCCCTCTaGGCCAGCTCAAGCCCCCGT +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLPASL*ASSSPR
Trigger: ACGGGGGCTTGAGCTGGCTCAGAGGGAGGCAGGGAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGSDGT*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCTCCAAAGGACATGGTaGTGCACTTCCCCAGCGTCA +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLQRTW*CTSPAS
Trigger: TGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCAACAGGAGACTTCTaGCCCGCCCCCACCATCCTG +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPTGDF*PAPTIL
Trigger: CAGGATGGTGGGGGCGGGGCAGAAGTCTCCTGTTGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCAACAGGAGACTTCTaGCCCGCCCCCACCATCCTG +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPTGDF*PAPTIL
Trigger: CAGGATGGTGGGGGCGGGGCAGAAGTCTCCTGTTGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGCTTCCAGAGTGCTTaGTCTGGCTATGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGFQSA*SGYGDG
Trigger: CCCATCTCCATAGCCAGACCAAGCACTCTGGAAGCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCAGGGGCTTCCTTCCTaGGGACACCAGTCAAGACCC +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMQGLPS*GHQSRP
Trigger: GGGTCTTGACTGGTGTCCTCAGGAAGGAAGCCCCTG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCAGGGGCTTCCTTCCTaGGGACACCAGTCAAGACCC +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPQGLPS*GHQSRP
Trigger: GGGTCTTGACTGGTGTCCTCAGGAAGGAAGCCCCTG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGCAGGAGAATGGTGTaGGCCCAGGAGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGRRMV*AQEAEL
Trigger: AAGCTCTGCCTCCTGGGCTCACACCATTCTCCTGCC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGGTTGGAAGGAAACTaGATGTTCTCCAGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGLEGN*MFSRPG
Trigger: TCCTGGCCTGGAGAACATTCAGTTTCCTTCCAACCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGTGCCATGAACAGCTaGTGCCGTAGGAAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSAMNS*CRRKAR
Trigger: TCTTGCCTTCCTACGGCAGCAGCTGTTCATGGCACT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTACCTGCTACCTCCCTaGCTTCCTTCACGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPYLLPP*LPSRLC
Trigger: GCAAAGACGTGAAGGAAGCCAGGGAGGTAGCAGGTA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGATCGAGACCATCCTaGAGATCGAGACCATCCTGG +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPRSRPS*RSRPSW
Trigger: CCAGGATGGTCTCGATCTCCAGGATGGTCTCGATCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTTGTGGAAGGAGACCTaGATAGGGGAGCCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMLWKET*IGEPQA
Trigger: AGCCTGCGGCTCCCCTATTCAGGTCTCCTTCCACAA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACACACGCCAAGCGCTTaGGCCCAGCATCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGHTPSA*AQHPAL
Trigger: GAGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCTCCCTGCCTCCCTCTaGGCCAGCTCAAGCCCCCGT +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILPASL*ASSSPR
Trigger: ACGGGGGCTTGAGCTGGCTCAGAGGGAGGCAGGGAG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCTCCCTGCCTCCCTCTaGGCCAGCTCAAGCCCCCGT +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLPASL*ASSSPR
Trigger: ACGGGGGCTTGAGCTGGCTCAGAGGGAGGCAGGGAG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGCTGCCTTTTCTCCTaGGAGCAGCAGGCACATGCA +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGCLFS*EQQAHA
Trigger: TGCATGTGCCTGCTGCTCTCAGGAGAAAAGGCAGCC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGCTGCAGTAAGCTGTaGTCCTGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGCSKL*SCHCTP
Trigger: TGGAGTGCAGTGGCAGGATCACAGCTTACTGCAGCC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGSDGT*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGTCCAAAAGCTCCCTaGCTCCCTCTGAGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLACPKAP*LPLSQL
Trigger: GAGCTGGCTCAGAGGGAGGCAGGGAGCTTTTGGACA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCATCCATCAGGTCTCCTaGCTTAGGAAGGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPIHQVS*LRKAEW
Trigger: CCATTCTGCCTTCCTAAGGCAGGAGACCTGATGGAT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCTCCCTTCTGCTCCCTaGCCCAGCATTAGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMLPSAP*PSISSW
Trigger: CCAGCTACTAATGCTGGGGCAGGGAGCAGAAGGGAG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATCCTCCACCTGCCGCTaGGACCACTCTAACCCCCTA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGSSTCR*DHSNPL
Trigger: TAGGGGGTTAGAGTGGTCTCAGCGGCAGGTGGAGGA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACAGGGGCTTCCTTCCTaGGGACACCAGTCAAGACCC +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGQGLPS*GHQSRP
Trigger: GGGTCTTGACTGGTGTCCTCAGGAAGGAAGCCCCTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGCCCCCACCATCCTGTaGCACCACCACACAATATCA +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPAPTIL*HHHTIS
Trigger: TGATATTGTGTGGTGGTGTCACAGGATGGTGGGGGC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGGGGCAGACCACACTaGACAGGTGACAGAAAGACC +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAWGRPH*TGDRKT
Trigger: GGTCTTTCTGTCACCTGTTCAGTGTGGTCTGCCCCA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAAGTGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMKWRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAACCTCCACTT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGATCTCTTGACCTCGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGDLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACGAGGTCAAGAGATC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTCCAAAGGACATGGTaGTGCACTTCCCCAGCGTCA +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLQRTW*CTSPAS
Trigger: TGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGACCGCTGCTGCCTATaGAGGCCTGTGGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGADRCCL*RPVGWG
Trigger: TCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAAACAGATGGACCGCTaGTGCCTATGCAGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAKQMDR*CLCRPV
Trigger: CACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAAACAGATGGACCGCTaGTGCCTATGCAGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMKQMDR*CLCRPV
Trigger: CACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCAACAGGAGACTTCTaGCCCGCCCCCACCATCCTG +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPTGDF*PAPTIL
Trigger: CAGGATGGTGGGGGCGGGGCAGAAGTCTCCTGTTGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCCATGAACAGCTGCTaGCGTAGGAAGGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPAMNSC*RRKARG
Trigger: TCCTCTTGCCTTCCTACGGCAGCAGCTGTTCATGGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGCCATGAACAGCTGCTaGCGTAGGAAGGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPAMNSC*RRKARG
Trigger: TCCTCTTGCCTTCCTACGGCAGCAGCTGTTCATGGC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCCCTGGCTTCCAGAGTaGTTGGTCTGGCTATGGAGA +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMPWLPE*LVWLWR
Trigger: TCTCCATAGCCAGACCAAGCACTCTGGAAGCCAGGG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCCTGGCTTCCAGAGTaGTTGGTCTGGCTATGGAGA +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPWLPE*LVWLWR
Trigger: TCTCCATAGCCAGACCAAGCACTCTGGAAGCCAGGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCCTGGCTTCCAGAGTaGTTGGTCTGGCTATGGAGA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPWLPE*LVWLWR
Trigger: TCTCCATAGCCAGACCAAGCACTCTGGAAGCCAGGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGA +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPVGWG*QQGTGR
Trigger: TCTACCAGTACCCTGTTGCCATCCCCATCCCACAGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTCTCTAGCAGGGGACTaGGAACCCACCCCCACTGTC +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARSLAGD*EPTPTV
Trigger: GACAGTGGGGGTGGGTTCTCAGTCCCCTGCTAGAGA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTCCTCCACCTGCCGCTaGGACCACTCTAACCCCCTA +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARSSTCR*DHSNPL
Trigger: TAGGGGGTTAGAGTGGTCTCAGCGGCAGGTGGAGGA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCACACGCCAAGCGCTTaGGCCCAGCATCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIHTPSA*AQHPAL
Trigger: GAGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCAGTTTTGGGACAGTaGAGGGACATCTTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPVLGQ*RDIFSA
Trigger: GGCACTGAAGATGTCCCTTCACTGTCCCAAAACTGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGGAAGCTGCACCTCTaGGAGGGCCCTGGTCCTAGA +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAWKLHL*EGPGPR
Trigger: TCTAGGACCAGGGCCCTCTCAGAGGTGCAGCTTCCA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGCTGCAGTAAGCTGTaGTCCTGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGCSKL*SCHCTP
Trigger: TGGAGTGCAGTGGCAGGATCACAGCTTACTGCAGCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTGGTCTCAATCTCCTaGTCTCGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLVSIS*SRDLPA
Trigger: GGCGGGCAGATCACGAGATCAGGAGATTGAGACCAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCAAAGGACATGGTGCTaGACTTCCCCAGCGTCACAT +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPQRTWC*TSPASH
Trigger: ATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGACCGCTGCTGCCTATaGAGGCCTGTGGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIDRCCL*RPVGWG
Trigger: TCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGACCCAATCTCCTCTaGCTGCAACTCTCCCTAGAG +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPRPNLL*LQLSLE
Trigger: CTCTAGGGAGAGTTGCAGGCAGAGGAGATTGGGTCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGTGCCATGAACAGCTaGTGCCGTAGGAAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSAMNS*CRRKAR
Trigger: TCTTGCCTTCCTACGGCAGCAGCTGTTCATGGCACT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGTGCCATGAACAGCTaGTGCCGTAGGAAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSAMNS*CRRKAR
Trigger: TCTTGCCTTCCTACGGCAGCAGCTGTTCATGGCACT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAGTGCCATGAACAGCTaGTGCCGTAGGAAGGCAAGA +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMSAMNS*CRRKAR
Trigger: TCTTGCCTTCCTACGGCAGCAGCTGTTCATGGCACT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAGGGACATCTTCAGTaGCATGAACAGCTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKGHLQ*HEQLLP
Trigger: CGGCAGCAGCTGTTCATGGCACTGAAGATGTCCCTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCAGGCCAGGATGAGATaGAAGATGAGACCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMQARMR*KMRPGA
Trigger: AGCACCAGGTCTCATCTTGCATCTCATCCTGGCCTG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGGCTTTCAAAAATGTaGCAGCTTTCTGAGTGTGAG +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGLSKM*QLSECE
Trigger: CTCACACTCAGAAAGCTGGCACATTTTTGAAAGCCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAAAACAGAAAGGGCTaGGCCCTTTATCAAAGTTAC +
Preference number: 2 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQNRKG*ALYQSY
Trigger: GTAACTTTGATAAAGGGCCCAGCCCTTTCTGTTTTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAATCTAGGATCCCACTaGCCCCTTTCCAGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLANLGSH*PLSSSH
Trigger: ATGGCTGCTGGAAAGGGGCCAGTGGGATCCTAGATT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAATCTAGGATCCCACTaGCCCCTTTCCAGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPNLGSH*PLSSSH
Trigger: ATGGCTGCTGGAAAGGGGCCAGTGGGATCCTAGATT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTACCTGCTACCTCCCTaGCTTCCTTCACGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPYLLPP*LPSRLC
Trigger: GCAAAGACGTGAAGGAAGCCAGGGAGGTAGCAGGTA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACAAAGGGAGCAGAGATaGGGGGAAAGGGGTGCTAAA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAQREQR*GERGAK
Trigger: TTTAGCACCCCTTTCCCCCCATCTCTGCTCCCTTTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACACTGCACTCCACCCTaGGCAACCCTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAHCTPP*ATLSQK
Trigger: TTTTTGAGACAGGGTTGCCCAGGGTGGAGTGCAGTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCACTGCACTCCACCCTaGGCAACCCTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPHCTPP*ATLSQK
Trigger: TTTTTGAGACAGGGTTGCCCAGGGTGGAGTGCAGTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGATCGAGACCATCCTaGAGATCGAGACCATCCTGG +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARSRPS*RSRPSW
Trigger: CCAGGATGGTCTCGATCTCCAGGATGGTCTCGATCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGAATGCCTAACCTCCTaGGAATGCAGCCCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAECLTS*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCCCAGCATTAGTAGCTaGGACCTCTCCACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMPSISS*DLSTEA
Trigger: TGCTTCTGTGGAGAGGTCCCAGCTACTAATGCTGGG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTCTGTCGCCCAGGCTaGAGTGCAGTTGTGCGATCT +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLCRPG*SAVVRS
Trigger: AGATCGCACAACTGCACTCCAGCCTGGGCGACAGAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCTCTAGCAGGGGACTaGGAACCCACCCCCACTGTC +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISLAGD*EPTPTV
Trigger: GACAGTGGGGGTGGGTTCTCAGTCCCCTGCTAGAGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTCTCTAGCAGGGGACTaGGAACCCACCCCCACTGTC +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSLAGD*EPTPTV
Trigger: GACAGTGGGGGTGGGTTCTCAGTCCCCTGCTAGAGA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATTGTGGAAGGAGACCTaGATAGGGGAGCCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALWKET*IGEPQA
Trigger: AGCCTGCGGCTCCCCTATTCAGGTCTCCTTCCACAA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGCAGCCATAGCCCATaGTGCCACAGATATTCTGTC +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASSHSP*CHRYSV
Trigger: GACAGAATATCTGTGGCATCATGGGCTATGGCTGCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGCAGCCATAGCCCATaGTGCCACAGATATTCTGTC +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSSHSP*CHRYSV
Trigger: GACAGAATATCTGTGGCATCATGGGCTATGGCTGCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCCTCCACCTGCCGCTaGGACCACTCTAACCCCCTA +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISSTCR*DHSNPL
Trigger: TAGGGGGTTAGAGTGGTCTCAGCGGCAGGTGGAGGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTCCTCCACCTGCCGCTaGGACCACTCTAACCCCCTA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSSTCR*DHSNPL
Trigger: TAGGGGGTTAGAGTGGTCTCAGCGGCAGGTGGAGGA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGGCTGCCTTTTCTCCTaGGAGCAGCAGGCACATGCA +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAGCLFS*EQQAHA
Trigger: TGCATGTGCCTGCTGCTCTCAGGAGAAAAGGCAGCC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGCAGGAGAATGGTGTaGGCCCAGGAGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWGRRMV*AQEAEL
Trigger: AAGCTCTGCCTCCTGGGCTCACACCATTCTCCTGCC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGGAAGGCAGAATGGTaGCTTGCACACATCGTTCCA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARKAEW*LAHIVP
Trigger: TGGAACGATGTGTGCAAGTCACCATTCTGCCTTCCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAAACAGATGGACCGCTaGTGCCTATGCAGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPKQMDR*CLCRPV
Trigger: CACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGTCCAAAAGCTCCCTaGCTCCCTCTGAGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGACPKAP*LPLSQL
Trigger: GAGCTGGCTCAGAGGGAGGCAGGGAGCTTTTGGACA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGCTTCTTTACCACATaGTGTTTTATTGGCAAGGTC +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGFFTT*CFIGKV
Trigger: GACCTTGCCAATAAAACAGCATGTGGTAAAGAAGCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGA +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPVGWG*QQGTGR
Trigger: TCTACCAGTACCCTGTTGCCATCCCCATCCCACAGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGCAGGCCTGTGGGATaGGGATGGCAACAGGGTACT +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGACRPVG*GWQQGT
Trigger: AGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAAAATAACCCAGGCGTaGTGGCAGGCACTTGTAGTC +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPKITQA*WQALVV
Trigger: GACTACAAGTGCCTGCCACCACGCCTGGGTTATTTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAAAATAACCCAGGCGTaGTGGCAGGCACTTGTAGTC +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAKITQA*WQALVV
Trigger: GACTACAAGTGCCTGCCACCACGCCTGGGTTATTTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGCAGGTGTGTGTTTGTaGGTGGCTTCCAGTCAACAT +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMAGVCL*VASSQH
Trigger: ATGTTGACTGGAAGCCACCCACAAACACACACCTGC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGGGTTTCACCATATTaGCCAGGCTGGCTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGVSPY*PGWLVS
Trigger: TGAGACCAGCCAGCCTGGCCAATATGGTGAAACCCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAATGCCTTAACCGTCTaGGAATGCAGCCCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMNALTV*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGACGGTTAAGGCATT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 90 bp TTCCCCTCTGACGCAAAGAGGAAGTGGCTGGGCTTTCTTATCAGCTaGTCCAGATCCAGGCAAACTGAGGGGGAGAGCTTGAATGCTATT +
Preference number: 2 (lower is better)
Translates to: FPSDAKRKWLGFLIS*SRSRQTEGESLNAI
Trigger: AATAGCATTCAAGCTCTCCCCCTCAGTTTGCCTGGATCTGGACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTGCGTCAGAGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPSALL*FTLSTT
Trigger: TGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGCGTTTATATCTGCTaGGGCCGAGGATCCTATAGA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASVYIC*GRGSYR
Trigger: TCTATAGGATCCTCGGCCTCAGCAGATATAAACGCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGCTGCCTTTTCTCCTaGGAGCAGCAGGCACATGCA +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGCLFS*EQQAHA
Trigger: TGCATGTGCCTGCTGCTCTCAGGAGAAAAGGCAGCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGGTTGGAAGGAAACTaGATGTTCTCCAGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGLEGN*MFSRPG
Trigger: TCCTGGCCTGGAGAACATTCAGTTTCCTTCCAACCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCAAAGGACATGGTGCTaGACTTCCCCAGCGTCACAT +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPQRTWC*TSPASH
Trigger: ATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTGTCCAAAAGCTCCCTaGCTCCCTCTGAGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAICPKAP*LPLSQL
Trigger: GAGCTGGCTCAGAGGGAGGCAGGGAGCTTTTGGACA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGCAGCAAGGCTAACTaGATGAGAAGCCTTTCACCC +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGSKAN*MRSLSP
Trigger: GGGTGAAAGGCTTCTCATGCAGTTAGCCTTGCTGCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTTGATTCTTGCTTTTTaGTTCAACACAAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLILAF*FNTSGW
Trigger: CCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAAGGGACATCTTCAGTaGCATGAACAGCTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGKGHLQ*HEQLLP
Trigger: CGGCAGCAGCTGTTCATGGCACTGAAGATGTCCCTT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCGGAGATCGCGCCACTaGACTCTAGCCTGGGTAACA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRRSRH*TLAWVT
Trigger: TGTTACCCAGGCTAGAGTGCAGTGGCGCGATCTCCG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGA +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPVGWG*QQGTGR
Trigger: TCTACCAGTACCCTGTTGCCATCCCCATCCCACAGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTGCAGGCCTGTGGGATaGGGATGGCAACAGGGTACT +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAICRPVG*GWQQGT
Trigger: AGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACAAAGGGAGCAGAGATaGGGGGAAAGGGGTGCTAAA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGQREQR*GERGAK
Trigger: TTTAGCACCCCTTTCCCCCCATCTCTGCTCCCTTTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTACAAGGTATCCTGTaGCAAAGGGAGCAGAGATGG +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLQGIL*QREQRW
Trigger: CCATCTCTGCTCCCTTTGCCACAGGATACCTTGTAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGGAACCAAGAGAGGTaGGGCCACGGGTTTAGAGGC +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRNQER*GHGFRG
Trigger: GCCTCTAAACCCGTGGCCCCACCTCTCTTGGTTCCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAATGCAAGATGAGACCTaGTGCTCAGGGCAATCAGAA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAMQDET*CSGQSE
Trigger: TTCTGATTGCCCTGAGCACCAGGTCTCATCTTGCAT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGCCTCCCGAGTAGCTaGGACTACAGGCGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSLPSS*DYRRPL
Trigger: CAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 90 bp CCTTTTCTCCTGAGAGCAGCAGGCACATGCACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACCAGATCTCATACATGGAGAGGGGTA +
Preference number: 2 (lower is better)
Translates to: PFLLRAAGTCTCSFG*NLIASTRSHTWRGV
Trigger: TACCCCTCTCCATGTATGAGATCTGGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCTGCTCTCAGGAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 90 bp CAGACATCACAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTaGGCTGCACTGTCCATGGCAGTCACCACACCAATTGTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: QTSQISVGQTIQDPA*AALSMAVTTPIVFL
Trigger: CAAAAACACAATTGGTGTGGTGACTGCCATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTGTGATGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACATCTTCAGTGCCATaGACAGCTGCTGCCGTAGGA +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATSSVP*TAAAVG
Trigger: TCCTACGGCAGCAGCTGTTCATGGCACTGAAGATGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCCAATTTTTGCAGGTaGGGAAATGGAAGCCTTGAA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPNFCR*GNGSLE
Trigger: TTCAAGGCTTCCATTTCCTCACCTGCAAAAATTGGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCCCAATTTTTGCAGGTaGGGAAATGGAAGCCTTGAA +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMPNFCR*GNGSLE
Trigger: TTCAAGGCTTCCATTTCCTCACCTGCAAAAATTGGG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATTTGAACTTCCCCTCTaGCGCAAAGAGGAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGFELPL*RKEEVA
Trigger: AGCCACTTCCTCTTTGCGTCAGAGGGGAAGTTCAAA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGGGTTTGCACAGTTTaGACTTCCCCTCTGACGCAA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGRVCTV*TSPLTQ
Trigger: TTGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCAAAGGACATGGTGCTaGACTTCCCCAGCGTCACAT +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARQRTWC*TSPASH
Trigger: ATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAAACAGATGGACCGCTaGTGCCTATGCAGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIKQMDR*CLCRPV
Trigger: CACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATCCAGCACTCCCTCTaGTCTTCTCTGATTCACTTT +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMIQHSL*SSLIHF
Trigger: AAAGTGAATCAGAGAAGAGCAGAGGGAGTGCTGGAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGACCCAATCTCCTCTaGCTGCAACTCTCCCTAGAG +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARPNLL*LQLSLE
Trigger: CTCTAGGGAGAGTTGCAGGCAGAGGAGATTGGGTCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGCCATGAACAGCTGCTaGCGTAGGAAGGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLAMNSC*RRKARG
Trigger: TCCTCTTGCCTTCCTACGGCAGCAGCTGTTCATGGC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGGCTTTCAAAAATGTaGCAGCTTTCTGAGTGTGAG +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGLSKM*QLSECE
Trigger: CTCACACTCAGAAAGCTGGCACATTTTTGAAAGCCC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGCTGGGTGGTTAAGTaGACACAACCTTCCAAGATT +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLACWVVK*TQPSKI
Trigger: AATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTTCTGTTAAACAGATaGACCGCTGCTGCCTATGCA +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPFLLNR*TAAAYA
Trigger: TGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTTCTGTTAAACAGATaGACCGCTGCTGCCTATGCA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAFLLNR*TAAAYA
Trigger: TGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGATTTTCATCTGTTCTaGTCCCTGCTGGGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPDFHLF*SLLGLW
Trigger: CCAGAGACCCAGCAGGGACCAGAACAGATGAAAATC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATACCTGCTACCTCCCTaGCTTCCTTCACGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAYLLPP*LPSRLC
Trigger: GCAAAGACGTGAAGGAAGCCAGGGAGGTAGCAGGTA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACCAGATCTCATACATaGAGAGGGGTATGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATRSHT*RGVCEA
Trigger: AGCTTCACATACCCCTCTCCATGTATGAGATCTGGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTATTTTCACCTGCTCATaGCAATCCAGAGCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPIFTCS*QSRAGK
Trigger: CTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAAT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAATTTTCACCTGCTCATaGCAATCCAGAGCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAIFTCS*QSRAGK
Trigger: CTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAAT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCATTTTCACCTGCTCATaGCAATCCAGAGCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPIFTCS*QSRAGK
Trigger: CTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAAT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGTGTGTGTTTGTGGGTaGCTTCCAGTCAACATTTCA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAVCVCG*LPVNIS
Trigger: TGAAATGTTGACTGGAAGCCACCCACAAACACACAC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCAAAGAGGAAGTGGCTaGGCTTTCTTATCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMQRGSG*AFLSAC
Trigger: ACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 90 bp CCAACAAGGAACCAGCTGGCGAAGCAGCATCGTGCCTGTTCTTTGTaGCCTGTGTTTTTCATTTTAAGTCGGTGGAGTTACAACCCATGG +
Preference number: 2 (lower is better)
Translates to: PTRNQLAKQHRACSL*PVFFILSRWSYNPW
Trigger: CCATGGGTTGTAACTCCACCGACTTAAAATGAAAAACACAGGCAACAAAGAACAGGCACGATGCTGCTTCGCCAGCTGGTTCCTTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGCAGCCATAGCCCATaGTGCCACAGATATTCTGTC +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARSSHSP*CHRYSV
Trigger: GACAGAATATCTGTGGCATCATGGGCTATGGCTGCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPARLTA*EAFHPF
Trigger: AAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCCAGTTTTGGGACAGTaGAGGGACATCTTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWPVLGQ*RDIFSA
Trigger: GGCACTGAAGATGTCCCTTCACTGTCCCAAAACTGG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACTCATAAAGCAGTGTaGATTATCGTTGTTCCACGC +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATHKAV*IIVVPR
Trigger: GCGTGGAACAACGATAATTCACACTGCTTTATGAGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGATCTCTTGACCTCGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPDLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACGAGGTCAAGAGATC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGCAGCAAGGCTAACTaGATGAGAAGCCTTTCACCC +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWGSKAN*MRSLSP
Trigger: GGGTGAAAGGCTTCTCATGCAGTTAGCCTTGCTGCC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGAGCTTTCAAATCCTTaGGATTCTGTCACTAGCTTC +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPELSNP*DSVTSF
Trigger: GAAGCTAGTGACAGAATCCCAAGGATTTGAAAGCTC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAACCACAAAGGGCAGTaGTCTCTCTCTTCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPNHKGQ*SLSSEL
Trigger: CAACTCTGAAGAGAGAGACCACTGCCCTTTGTGGTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGATTTTCATCTGTTCTaGTCCCTGCTGGGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARDFHLF*SLLGLW
Trigger: CCAGAGACCCAGCAGGGACCAGAACAGATGAAAATC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAGGCACACCATGCCTaGAACCCAGATCTGATGACT +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKAHHA*NPDLMT
Trigger: AGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGAATGCCTAACCTCCTaGGAATGCAGCCCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLECLTS*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACA +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARPSALL*FTLSTT
Trigger: TGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTTTCACCCTTTTACTaGGTCCTTGGATCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLSPFY*VLGSVV
Trigger: AACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAARLTA*EAFHPF
Trigger: AAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCC +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGDAEVH*LAQDQS
Trigger: GGATTGATCTTGAGCAAGTCAATGAACCTCTGCATC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTTGAGCCCAGGAGTTTaGGACCAGCATGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLSPGV*DQHEQH
Trigger: ATGTTGCTCATGCTGGTCTCAAACTCCTGGGCTCAA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTGAGCCCAGGAGTTTaGGACCAGCATGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWLSPGV*DQHEQH
Trigger: ATGTTGCTCATGCTGGTCTCAAACTCCTGGGCTCAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTCAGGCCTTGAAGAATaGAGAGCTGAACTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSGLEE*RAELAE
Trigger: CTCTGCCAGTTCAGCTCTTCATTCTTCAAGGCCTGA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTCAGGCCTTGAAGAATaGAGAGCTGAACTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSGLEE*RAELAE
Trigger: CTCTGCCAGTTCAGCTCTTCATTCTTCAAGGCCTGA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATCAGAAACTGTCAACTaGAGCCAAACAGCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGSETVN*SQTAQN
Trigger: GTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTGA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAATGGTCTCGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPMVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCGAGACCAT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTGATTCTTGCTTTTTaGTTCAACACAAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALILAF*FNTSGW
Trigger: CCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGATCCATCAGGTCTCCTaGCTTAGGAAGGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLIHQVS*LRKAEW
Trigger: CCATTCTGCCTTCCTAAGGCAGGAGACCTGATGGAT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATGCAGGCCTGTGGGATaGGGATGGCAACAGGGTACT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPCRPVG*GWQQGT
Trigger: AGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTTCTGTTAAACAGATaGACCGCTGCTGCCTATGCA +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPFLLNR*TAAAYA
Trigger: TGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGATTTTCATCTGTTCTaGTCCCTGCTGGGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIDFHLF*SLLGLW
Trigger: CCAGAGACCCAGCAGGGACCAGAACAGATGAAAATC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAAGGCACACCATGCCTaGAACCCAGATCTGATGACT +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWKAHHA*NPDLMT
Trigger: AGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAAAATAACCCAGGCGTaGTGGCAGGCACTTGTAGTC +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLKITQA*WQALVV
Trigger: GACTACAAGTGCCTGCCACCACGCCTGGGTTATTTT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACA +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPSALL*FTLSTT
Trigger: TGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLPSALL*FTLSTT
Trigger: TGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIARLTA*EAFHPF
Trigger: AAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGCGTTTATATCTGCTaGGGCCGAGGATCCTATAGA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSVYIC*GRGSYR
Trigger: TCTATAGGATCCTCGGCCTCAGCAGATATAAACGCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTATTCCATACTCTACTaGAAAAGACATCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPYSILY*KRHLPG
Trigger: ACCTGGAAGATGTCTTTTTCAGTAGAGTATGGAATA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAACCACACTGAACAGGTaGCAGAAAGACCTTCAAATA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGTTLNR*QKDLQI
Trigger: TATTTGAAGGTCTTTCTGTCACCTGTTCAGTGTGGT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGCAATTACCAGAACTaGGGGTTCCTCTCCTTTTTA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGSNYQN*GFLSFL
Trigger: TAAAAAGGAGAGGAACCCTCAGTTCTGGTAATTGCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGACACCAAGAGGTTATaGAAAAGTTTACTACTCACA +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMDTKRL*KSLLLT
Trigger: TGTGAGTAGTAAACTTTTTCATAACCTCTTGGTGTC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGTGGGAATTGAACAATaGGAAAACATGGACACAGGA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGVGIEQ*ENMDTG
Trigger: TCCTGTGTCCATGTTTTCTCATTGTTCAATTCCCAC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGCCTTCATTTTCACCTaGTCATGGCAATCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLAFIFT*SWQSRA
Trigger: TGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGCTCAAGATCAATCCTaGCAAGAAAAGGCACACCAT +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAAQDQS*QEKAHH
Trigger: ATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCAAGATGAGACCTGGTaGTCAGGGCAATCAGAAACT +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWQDETW*SGQSET
Trigger: AGTTTCTGATTGCCCTGAGCACCAGGTCTCATCTTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGAGTTCTTGGACCTTaGTCAAGAAAAGAATTCGGG +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGRVLGP*SRKEFG
Trigger: CCCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTCCCGTGACTTAGAATaGCTTAACCGTCTGGGAATG +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSRDLE*LNRLGM
Trigger: CATTCCCAGACGGTTAAGGCATTCTAAGTCACGGGA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAACCACAAAGGGCAGTaGTCTCTCTCTTCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWNHKGQ*SLSSEL
Trigger: CAACTCTGAAGAGAGAGACCACTGCCCTTTGTGGTT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAACCACAAAGGGCAGTaGTCTCTCTCTTCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAINHKGQ*SLSSEL
Trigger: CAACTCTGAAGAGAGAGACCACTGCCCTTTGTGGTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTC +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMCKDPR*QDFHLF
Trigger: GAACAGATGAAAATCCTGCCATCTTGGATCTTTACA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTC +
Preference number: 2 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPCKDPR*QDFHLF
Trigger: GAACAGATGAAAATCCTGCCATCTTGGATCTTTACA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACCAGATCTCATACATaGAGAGGGGTATGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATRSHT*RGVCEA
Trigger: AGCTTCACATACCCCTCTCCATGTATGAGATCTGGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGACATCTTCCAGGTTaGTTTCTTCTCATTTCAAGA +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPRHLPG*FLLISR
Trigger: TCTTGAAATGAGAAGAAACCAACCTGGAAGATGTCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACACATGCTGTTTTATTaGCAAGGTCTTTATGACTGT +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAHMLFY*QGLYDC
Trigger: ACAGTCATAAAGACCTTGCCAATAAAACAGCATGTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAAAAGGTGTGGTAGCTaGCATACAAGTATTTACTCT +
Preference number: 2 (lower is better)
Translates to: QISVGQTIQDPALAALSMKRCGS*HTSIYS
Trigger: AGAGTAAATACTTGTATGCCAGCTACCACACCTTTT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGGGTTTCACCATATTaGCCAGGCTGGCTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGVSPY*PGWLVS
Trigger: TGAGACCAGCCAGCCTGGCCAATATGGTGAAACCCC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTATTTCTTTGGGGTTaGGGGGATTTCTTCAGTATC +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLFLWG*GDFFSI
Trigger: GATACTGAAGAAATCCCCCCAACCCCAAAGAAATAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCTTTCACCCTTTTACTaGGTCCTTGGATCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWLSPFY*VLGSVV
Trigger: AACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCTTTCACCCTTTTACTaGGTCCTTGGATCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLSPFY*VLGSVV
Trigger: AACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACAACTAAAACCTGGCTaGTATAAAATCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGQLKPG*YKISLL
Trigger: CAGCAAGGAGATTTTATATCAGCCAGGTTTTAGTTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGAAGCTGTGGGTTTGTaGACTAGATCAAGACTTGGA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLEAVGL*TRSRLG
Trigger: TCCAAGTCTTGATCTAGTTCACAAACCCACAGCTTC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCATCCAGCACTCCCTCTaGTCTTCTCTGATTCACTTT +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIIQHSL*SSLIHF
Trigger: AAAGTGAATCAGAGAAGAGCAGAGGGAGTGCTGGAT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARLPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGACCCAATCTCCTCTaGCTGCAACTCTCCCTAGAG +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPRPNLL*LQLSLE
Trigger: CTCTAGGGAGAGTTGCAGGCAGAGGAGATTGGGTCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACAGAGGTAATTTTGTaGAAGATATTTTCTGCATGG +
Preference number: 2 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTEVIL*KIFSAW
Trigger: CCATGCAGAAAATATCTTGCACAAAATTACCTCTGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGAGGTCACTTTCATTaGCATCTTGGTTTTGACCGG +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRGHFH*HLGFDR
Trigger: CCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GGTGTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCTCAGGTACCTTTCTATaGAGCACAGAACAACCCAAG +
Preference number: 2 (lower is better)
Translates to: GVSYHTQPPLIFTIIQNGSGTFL*STEQPK
Trigger: CTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGA...GCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
3UTR-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGAGCTTTCAAATCCTTaGGATTCTGTCACTAGCTTC +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARELSNP*DSVTSF
Trigger: GAAGCTAGTGACAGAATCCCAAGGATTTGAAAGCTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTTCTGTTAAACAGATaGACCGCTGCTGCCTATGCA +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIFLLNR*TAAAYA
Trigger: TGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGAGTCCTTGGATCTGTaGTTAACCCTTATAAAATAT +
Preference number: 2 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAESLDL*LTLIKY
Trigger: ATATTTTATAAGGGTTAACCACAGATCCAAGGACTC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCACCAGATCTCATACATaGAGAGGGGTATGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAITRSHT*RGVCEA
Trigger: AGCTTCACATACCCCTCTCCATGTATGAGATCTGGT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGCACTTACCCACACTTaGGCTTTCAAAAATGTGCCA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLALTHT*AFKNVP
Trigger: TGGCACATTTTTGAAAGCCCAAGTGTGGGTAAGTGC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTTGGTGGGTTTTAGCTaGCTTCTTTACTGCAACCTG +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLVGFS*LLYCNL
Trigger: CAGGTTGCAGTAAAGAAGCCAGCTAAAACCCACCAA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACACCAGATGGGTAACTaGGCAGCCAAGGGGATAATC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPHQMGN*AAKGII
Trigger: GATTATCCCCTTGGCTGCCCAGTTACCCATCTGGTG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATCAGGGACCAAGTTCTaGCTTCTGCCCTTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSGTKF*LLPLEE
Trigger: CTCCTCTAAGGGCAGAAGCCAGAACTTGGTCCCTGA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGCAGCCATAGCCCATaGTGCCACAGATATTCTGTC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSSHSP*CHRYSV
Trigger: GACAGAATATCTGTGGCATCATGGGCTATGGCTGCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGCAATTACCAGAACTaGGGGTTCCTCTCCTTTTTA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSNYQN*GFLSFL
Trigger: TAAAAAGGAGAGGAACCCTCAGTTCTGGTAATTGCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGCTGGCTTCTTTACTaGAACCTGCTTTATCAGCAA +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSWLLY*NLLYQQ
Trigger: TTGCTGATAAAGCAGGTTGCAGTAAAGAAGCCAGCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGACCATTCAGGATCCTaGTTTGGCTGCACTGTCCAT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPDHSGS*FGCTVH
Trigger: ATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCAAAACAGAAAGGGCTaGGCCCTTTATCAAAGTTAC +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLQNRKG*ALYQSY
Trigger: GTAACTTTGATAAAGGGCCCAGCCCTTTCTGTTTTG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGAGCTTTCAAATCCTTaGGATTCTGTCACTAGCTTC +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIELSNP*DSVTSF
Trigger: GAAGCTAGTGACAGAATCCCAAGGATTTGAAAGCTC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTC +
Preference number: 2 (lower is better)
Translates to: LILAFCFNTSGWASEGAPCKDPR*QDFHLF
Trigger: GAACAGATGAAAATCCTGCCATCTTGGATCTTTACA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGACATCTTCCAGGTTaGTTTCTTCTCATTTCAAGA +
Preference number: 2 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGRHLPG*FLLISR
Trigger: TCTTGAAATGAGAAGAAACCAACCTGGAAGATGTCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAAGGCACACCATGCCTaGAACCCAGATCTGATGACT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPKAHHA*NPDLMT
Trigger: AGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGTTCCCTATTCAAGATaGAGTCACTCTGGTTCAAAC +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLVPYSR*SHSGSN
Trigger: GTTTGAACCAGAGTGACTCCATCTTGAATAGGGAAC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCCAAGAGAGAGTTCTTaGACCTTGCTCAAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWPRESS*TLLKKR
Trigger: TCTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAACTGTAAACTGTCATaGCACTGGTGGGAGGGTAGC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPNCKLS*HWWEGS
Trigger: GCTACCCTCCCACCAGTGCCATGACAGTTTACAGTT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACTTTCCCTCACGCCATaGCAAAAGCATCTCCATCAG +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPLSLTP*QKHLHQ
Trigger: CTGATGGAGATGCTTTTGCCATGGCGTGAGGGAAAG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 90 bp ACTCTAACTTCACACATAAGGAAATTGATGCAGAGGTTCATTGACTaGCTCAAGATCAATCCTGCCAAGAAAAGGCACACCATGCCTGGA +
Preference number: 2 (lower is better)
Translates to: TLTSHIRKLMQRFID*LKINPAKKRHTMPG
Trigger: TCCAGGCATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGCAAGTCAATGAACCTCTGCATCAATTTCCTTATGTGTGAAGTTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACTGAGGGGGAGAGCTTaGATGCTATTAGCAGACAAA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPLRGRA*MLLADK
Trigger: TTTGTCTGCTAATAGCATTCAAGCTCTCCCCCTCAG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTGATTCTTGCTTTTTaGTTCAACACAAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWLILAF*FNTSGW
Trigger: CCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATCAGGTACCTTTCTATaGAGCACAGAACAACCCAAG +
Preference number: 2 (lower is better)
Translates to: LPHPATFNLYNNPEWQALSGTFL*STEQPK
Trigger: CTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGA...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
3UTR-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGACATCTTCCAGGTTaGTTTCTTCTCATTTCAAGA +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARHLPG*FLLISR
Trigger: TCTTGAAATGAGAAGAAACCAACCTGGAAGATGTCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAATGCAAGATGAGACCTaGTGCTCAGGGCAATCAGAA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPMQDET*CSGQSE
Trigger: TTCTGATTGCCCTGAGCACCAGGTCTCATCTTGCAT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGCCCCAAGGGCTGCTaGTTGCCTATTTTTATGGTT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSPKGC*LPIFMV
Trigger: AACCATAAAAATAGGCAACCAGCAGCCCTTGGGGCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTCCTTTGTAGGGACATaGATGAAGGTGGAAATAATC +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSFVGT*MKVEII
Trigger: GATTATTTCCACCTTCATCCATGTCCCTACAAAGGA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCAGGCAATGATAGACTaGATTAAGAAAATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWQAMID*IKKMWH
Trigger: GTGCCACATTTTCTTAATCCAGTCTATCATTGCCTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCAGGCAATGATAGACTaGATTAAGAAAATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLQAMID*IKKMWH
Trigger: GTGCCACATTTTCTTAATCCAGTCTATCATTGCCTG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTATTCCATACTCTACTaGAAAAGACATCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWYSILY*KRHLPG
Trigger: ACCTGGAAGATGTCTTTTTCAGTAGAGTATGGAATA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTATTCCATACTCTACTaGAAAAGACATCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIYSILY*KRHLPG
Trigger: ACCTGGAAGATGTCTTTTTCAGTAGAGTATGGAATA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPDAEVH*LAQDQS
Trigger: GGATTGATCTTGAGCAAGTCAATGAACCTCTGCATC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGGAAATGGAAGCCTTaGAAGATTAGGTGGCTCACT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPRKWKP*KIRWLT
Trigger: AGTGAGCCACCTAATCTTTCAAGGCTTCCATTTCCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGAGTCCTTGGATCTGTaGTTAACCCTTATAAAATAT +
Preference number: 2 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAESLDL*LTLIKY
Trigger: ATATTTTATAAGGGTTAACCACAGATCCAAGGACTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGAGTCCTTGGATCTGTaGTTAACCCTTATAAAATAT +
Preference number: 2 (lower is better)
Translates to: KIQKRSGEESDLWELAARESLDL*LTLIKY
Trigger: ATATTTTATAAGGGTTAACCACAGATCCAAGGACTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGACATCTTCCAGGTTaGTTTCTTCTCATTTCAAGA +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWRHLPG*FLLISR
Trigger: TCTTGAAATGAGAAGAAACCAACCTGGAAGATGTCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGTGTGTGTTTGTGGGTaGCTTCCAGTCAACATTTCA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPVCVCG*LPVNIS
Trigger: TGAAATGTTGACTGGAAGCCACCCACAAACACACAC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTCTTCAGGCAAAAGGTaGTTAACTAACACTCAAAGT +
Preference number: 2 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSSGKR*LTNTQS
Trigger: ACTTTGAGTGTTAGTTAACCACCTTTTGCCTGAAGA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATCTGAGGAACCATGGTaGCATTTTGAGTCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSEEPW*HFESPV
Trigger: TACAGGAGACTCAAAATGCCACCATGGTTCCTCAGA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 90 bp GTTGCTGGGTGGTTAAGTGCACACAACCTTCCAAGATTTTGCAAATaGCCTGGCACAATATTTCTCACAATTTCTACTCATAAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: VAGWLSAHNLPRFCK*PGTIFLTISTHKAV
Trigger: CACTGCTTTATGAGTAGAAATTGTGAGAAATATTGTGCCAGGCAATTTGCAAAATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 90 bp CCCAAATCCATCAGGTCTCCTGCCTTAGGAAGGCAGAATGGTGACTaGCACACATCGTTCCAATACATGATTTTATACTCATTTCATATT +
Preference number: 2 (lower is better)
Translates to: PKSIRSPALGRQNGD*HTSFQYMILYSFHI
Trigger: AATATGAAATGAGTATAAAATCATGTATTGGAACGATGTGTGCAAGTCACCATTCTGCCTTCCTAAGGCAGGAGACCTGATGGATTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 90 bp ATAACATTTATAAGTCACCATAACAACCACTTATTTTTCAGGAACTaGGGGCAGATCCTGTCCAGTTCAAACCAGTTGAGACTGCCAACC +
Preference number: 2 (lower is better)
Translates to: ITFISHHNNHLFFRN*GQILSSSNQLRLPT
Trigger: GGTTGGCAGTCTCAACTGGTTTGAACTGGACAGGATCTGCCCCAAGTTCCTGAAAAATAAGTGGTTGTTATGGTGACTTATAAATGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAATTCTGAATGGTCTTaGACATCATGCACTGCACCT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPNSEWS*TSCTAP
Trigger: AGGTGCAGTGCATGATGTTCAAGACCATTCAGAATT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAAGTCGTCCAATCAGTaGTGCAGTCTATTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPKSSNQ*CSLFLW
Trigger: CCAAAGAAATAGACTGCAGCACTGATTGGACGACTT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGCTGGCTTCTTTACTaGAACCTGCTTTATCAGCAA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSWLLY*NLLYQQ
Trigger: TTGCTGATAAAGCAGGTTGCAGTAAAGAAGCCAGCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGAGTCCTTGGATCTGTaGTTAACCCTTATAAAATAT +
Preference number: 2 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIESLDL*LTLIKY
Trigger: ATATTTTATAAGGGTTAACCACAGATCCAAGGACTC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAACCTCCAAGACACCTTaGCATTTTCTTCTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPTSKTP*HFLLAF
Trigger: AAAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGATTCTCACTCATAGGTaGGAATTGAACAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWILTHR*ELNNEK
Trigger: TTTCTCATTGTTCAATTCCCACCTATGAGTGAGAAT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 90 bp TCAATGTCTCTAAATGAAGTTTTATTGGAACACATCTACACTCATTaGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SMSLNEVLLEHIYTH*CVCVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACAGACACACACACACAAATGAGTGTAGATGTGTTCCAATAAAACTTCATTTAGAGACATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATTTTTGTTGTGGTTATaGGAGCTCAGTGCATTTGAC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPFLLWL*ELSAFD
Trigger: GTCAAATGCACTGAGCTCTCATAACCACAACAAAAA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACTCATAGGTGGGAATTaGACAATGAGAAAACATGGA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPLIGGN*TMRKHG
Trigger: TCCATGTTTTCTCATTGTTCAATTCCCACCTATGAG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAAACCCATGTCACAGTaGTTGATTTACTGTGTGAGA +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPKPMSQ*LIYCVR
Trigger: TCTCACACAGTAAATCAATCACTGTGACATGGGTTT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACCAAGGGCTGCTGGTTaGCTATTTTTATGGTTATTT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPPRAAG*LFLWLF
Trigger: AAATAACCATAAAAATAGGCAACCAGCAGCCCTTGG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATTTCAACTCATTCAGTaGAGGTTATGTTTGCATTCG +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPFQLIQ*RLCLHS
Trigger: CGAATGCAAACATAACCTGCACTGAATGAGTTGAAA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAATTCTTCTCTCTTTTaGAAAACCCATGTCACAGTG +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPNSSLF*KTHVTV
Trigger: CACTGTGACATGGGTTTTGCAAAAGAGAGAAGAATT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTC +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPCKDPR*QDFHLF
Trigger: GAACAGATGAAAATCCTGCCATCTTGGATCTTTACA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACACATGCTGTTTTATTaGCAAGGTCTTTATGACTGT +
Preference number: 2 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPHMLFY*QGLYDC
Trigger: ACAGTCATAAAGACCTTGCCAATAAAACAGCATGTG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 90 bp GATTTAGGCAAGGAGGAGCTTATAATTTCCTATAAAGTGCATGTCTaGGTGACTGTGCGTCAGTATATAGAGAACATCCTCATTTTTAAA +
Preference number: 2 (lower is better)
Translates to: DLGKEELIISYKVHV*VTVRQYIENILIFK
Trigger: TTTAAAAATGAGGATGTTCTCTATATACTGACGCACAGTCACCAAGACATGCACTTTATAGGAAATTATAAGCTCCTCCTTGCCTAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 90 bp TGTAGCTTCACCAACTTTCTCAGCATAATTTTTCATCTATCTGTGTaGAGACGTAACTCTTTCATATTCACTTTCCAAGGACCAAAAACA +
Preference number: 2 (lower is better)
Translates to: CSFTNFLSIIFHLSV*RRNSFIFTFQGPKT
Trigger: TGTTTTTGGTCCTTGGAAAGTGAATATGAAAGAGTTACGTCTCAACACAGATAGATGAAAAATTATGCTGAGAAAGTTGGTGAAGCTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp CAGCCTGGGCAGCCCTGCGGGGCCCCACACTTAGAATaGCCTCCGCCTGCTATCTTGCTCTGCTGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: QPGQPCGAPHLE*PPPAILLCCQG
Trigger: ACCCTGACAGCAGAGCAAGATAGCAGGCGGAGGCCATTCTAAGTGTGGGGCCCCGCAGGGCTGCCCAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp TTGGCCAGGCTGGCTGGTCTCAATCTCCTGATCTCGTaGTCTGCCCGCCTCAGCCTCCCGAGTAGCTGGGAC +
Preference number: 3 (lower is better)
Translates to: LARLAGLNLLIS*SARLSLPSSWD
Trigger: GTCCCAGCTACTCGGGAGGCTGAGGCGGGCAGATCACGAGATCAGGAGATTGAGACCAGCCAGCCTGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 72 bp GGGCCGGAGTCTCCAGAAGGGCTCCAAAGGACATGGTaGTGCACTTCCCCAGCGTCACATCCTAGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: GPESPEGLQRTW*CTSPASHPSRQ
Trigger: CTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCCCTTCTGGAGACTCCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp CTGGCTCCCTGCACTCCATCCCAGGGGCTTCCTTCCTaGGGACACCAGTCAAGACCCAATCTCCTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: LAPCTPSQGLPS*GHQSRPNLLCL
Trigger: CAGGCAGAGGAGATTGGGTCTTGACTGGTGTCCTCAGGAAGGAAGCCCCTGGGATGGAGTGCAGGGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 72 bp CCGGAGTCTCCAGAAGGGCTCCAAAGGACATGGTGCTaGACTTCCCCAGCGTCACATCCTAGCAGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: PESPEGLQRTWC*TSPASHPSRQA
Trigger: AGCCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCCCTTCTGGAGACTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp GACCGCTGCTGCCTATGCAGGCCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGAGATCCACACGCCAAG +
Preference number: 3 (lower is better)
Translates to: DRCCLCRPVGWG*QQGTGRDPHAK
Trigger: CTTGGCGTGTGGATCTCTACCAGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp TGTAGCCCCAGCTACTCGGGAGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCTGCAGTAAGCTGTGAT +
Preference number: 3 (lower is better)
Translates to: CSPSYSGGSDGT*AWEVKAAVSCD
Trigger: ATCACAGCTTACTGCAGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCCTCCCGAGTAGCTGGGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTGGCTTCCAGAGTGCTaGGTCTGGCTATGGAGATGG +
Preference number: 3 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPWLPEC*VWLWRW
Trigger: CCATCTCCATAGCCAGACCAAGCACTCTGGAAGCCA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp AAAATAGCCGGTCCTGATCAGGTCTCAAGGCAGCCCTaGACTTTGGAAGGCAGCACTGACGCCCCACTGAGG +
Preference number: 3 (lower is better)
Translates to: KIAGPDQVSRQP*TLEGSTDAPLR
Trigger: CCTCAGTGGGGCGTCAGTGCTGCCTTCCAAAGTCCAGGGCTGCCTTGAGACCTGATCAGGACCGGCTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GCAGCTTCACTTGTACCCAGGAGGTGCAGGTTGCAGTaGGCCAAGATTGCCTCCACTCCAGCTCGAGCTACA +
Preference number: 3 (lower is better)
Translates to: AASLVPRRCRLQ*AKIASTPARAT
Trigger: TGTAGCTCGAGCTGGAGTGGAGGCAATCTTGGCTCACTGCAACCTGCACCTCCTGGGTACAAGTGAAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCACACGCCAAGCGCTaGAGCCCAGCATCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPHAKR*SPASCS
Trigger: AGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 3 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GAGACCTGGTGCTCAGGGCAATCAGAAACTGTCAACTaGAGCCAAACAGCTCAGAACCACCCACAGCCGGGT +
Preference number: 3 (lower is better)
Translates to: ETWCSGQSETVN*SQTAQNHPQPG
Trigger: ACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTGATTGCCCTGAGCACCAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp GGTCCCTGCTGGGTCTCTGGCAAACACACCAGCGCCTaGTGTATGGGAGTGCTCAGCACATTTCTGTTAAAC +
Preference number: 3 (lower is better)
Translates to: GPCWVSGKHTSA*CMGVLSTFLLN
Trigger: GTTTAACAGAAATGTGCTGAGCACTCCCATACACCAGGCGCTGGTGTGTTTGCCAGAGACCCAGCAGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp CAGGATTTTCATCTGTTCTGGTCCCTGCTGGGTCTCTaGCAAACACACCAGCGCCTGGTGTATGGGAGTGCT +
Preference number: 3 (lower is better)
Translates to: QDFHLFWSLLGL*QTHQRLVYGSA
Trigger: AGCACTCCCATACACCAGGCGCTGGTGTGTTTGCCAGAGACCCAGCAGGGACCAGAACAGATGAAAATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp CCTCCAACATCCCAGCTTCCCTCTTACATCCCTGAATaGCAGAACCCAACAAGGAACCAGCTGGCGAAGCAG +
Preference number: 3 (lower is better)
Translates to: PPTSQLPSYIPE*QNPTRNQLAKQ
Trigger: CTGCTTCGCCAGCTGGTTCCTTGTTGGGTTCTGCCATTCAGGGATGTAAGAGGGAAGCTGGGATGTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCATAATTTCTGTTCTTTaGGCCGGGCACAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPIISVL*AGHSGS
Trigger: TGAGCCACTGTGCCCGGCCAAAAGAACAGAAATTAT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGGCTTCCAGAGTGCTaGGTCTGGCTATGGAGATGG +
Preference number: 3 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAWLPEC*VWLWRW
Trigger: CCATCTCCATAGCCAGACCAAGCACTCTGGAAGCCA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCCAAGAGAGAGTTCTaGGACCTTGCTCAAGAAAAG +
Preference number: 3 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPKREF*DLAQEK
Trigger: CTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp TGGTTACAACACCAACTGACATGGAAGCTGCACCTCTaGGAGGGCCCTGGTCCTAGAGGTCAACCACCTGAT +
Preference number: 3 (lower is better)
Translates to: WLQHQLTWKLHL*EGPGPRGQPPD
Trigger: ATCAGGTGGTTGACCTCTAGGACCAGGGCCCTCTCAGAGGTGCAGCTTCCATGTCAGTTGGTGTTGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp AACATCATGCACTGCACCTGGCAAAATAGCCGGTCCTaGTCAGGTCTCAAGGCAGCCCTGGACTTTGGAAGG +
Preference number: 3 (lower is better)
Translates to: NIMHCTWQNSRS*SGLKAALDFGR
Trigger: CCTTCCAAAGTCCAGGGCTGCCTTGAGACCTGATCAGGACCGGCTATTTTGCCAGGTGCAGTGCATGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GAGCAGGCTGGAGAACCAGGAGAATACATATTCCAGTaGGAGCCCAGTGGCACCTGCTGTGGAGCAGGATTA +
Preference number: 3 (lower is better)
Translates to: EQAGEPGEYIFQ*EPSGTCCGAGL
Trigger: TAATCCTGCTCCACAGCAGGTGCCACTGGGCTCTCACTGGAATATGTATTCTCCTGGTTCTCCAGCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 72 bp ATCCAAGATGGCAGGATTTTCATCTGTTCTGGTCCCTaGTGGGTCTCTGGCAAACACACCAGCGCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: IQDGRIFICSGP*WVSGKHTSAWC
Trigger: ACACCAGGCGCTGGTGTGTTTGCCAGAGACCCAGCAGGGACCAGAACAGATGAAAATCCTGCCATCTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp ACATCCCTGAATGGCAGAACCCAACAAGGAACCAGCTaGCGAAGCAGCATCGTGCCTGTTCTTTGTTGCCTG +
Preference number: 3 (lower is better)
Translates to: TSLNGRTQQGTS*RSSIVPVLCCL
Trigger: CAGGCAACAAAGAACAGGCACGATGCTGCTTCGCCAGCTGGTTCCTTGTTGGGTTCTGCCATTCAGGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCACACGCCAAGCGCTaGAGCCCAGCATCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPHAKR*SPASCS
Trigger: AGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp AACTGGGCCTGTACACATGCCCAAGAGGTGGCCTTTTaGCATCAGAGGGCCAAAAACTCCACCCTCAGATCA +
Preference number: 3 (lower is better)
Translates to: NWACTHAQEVAF*HQRAKNSTLRS
Trigger: TGATCTGAGGGTGGAGTTTTTGGCCCTCTGATGTCAAAAGGCCACCTCTTGGGCATGTGTACAGGCCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp TGTTGCCATGGCAACTGTAAACTGTCATGGCACTGGTaGGAGGGTAGCAGTGAGGATGACCAGAGGTCATTC +
Preference number: 3 (lower is better)
Translates to: CCHGNCKLSWHW*EGSSEDDQRSF
Trigger: GAATGACCTCTGGTCATCCTCACTGCTACCCTCCCACCAGTGCCATGACAGTTTACAGTTGCCATGGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 3 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTATAAAGTGCATGTCTaGGTGACTGTGCGTCAGTAT +
Preference number: 3 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPYKVHV*VTVRQY
Trigger: ATACTGACGCACAGTCACCAAGACATGCACTTTATA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGAGAGCTCAGTGCATTaGACAGTCAGGGTTTGCACA +
Preference number: 3 (lower is better)
Translates to: QISVGQTIQDPALAALSMESSVH*TVRVCT
Trigger: TGTGCAAACCCTGACTGTCAAATGCACTGAGCTCTC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTTCCTGCTTTGCACTTaGCTCCACATGAGGTGGGAT +
Preference number: 3 (lower is better)
Translates to: QISVGQTIQDPALAALSMFLLCT*LHMRWD
Trigger: ATCCCACCTCATGTGGAGCAAAGTGCAAAGCAGGAA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAATTTCACCTTCTCAGTaGAGGCCCTCCCTGACCAGA +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGISPSQ*RPSLTR
Trigger: TCTGGTCAGGGAGGGCCTCAACTGAGAAGGTGAAAT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTATTTCACCTTCTCAGTaGAGGCCCTCCCTGACCAGA +
Preference number: 3 (lower is better)
Translates to: LILAFCFNTSGWASEGAPISPSQ*RPSLTR
Trigger: TCTGGTCAGGGAGGGCCTCAACTGAGAAGGTGAAAT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACC +
Preference number: 3 (lower is better)
Translates to: QISVGQTIQDPALAALSMTCSFG*NLIAST
Trigger: GGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACC +
Preference number: 3 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPTCSFG*NLIAST
Trigger: GGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTATAATTTCTGTTCTTTaGGCCGGGCACAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPIISVL*AGHSGS
Trigger: TGAGCCACTGTGCCCGGCCAAAAGAACAGAAATTAT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAATAATTTCTGTTCTTTaGGCCGGGCACAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAIISVL*AGHSGS
Trigger: TGAGCCACTGTGCCCGGCCAAAAGAACAGAAATTAT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGGGGTTTCACCATATaGGCCAGGCTGGCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWWGFTI*ARLAGL
Trigger: GAGACCAGCCAGCCTGGCCAATATGGTGAAACCCCA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATCACCGTCTTGGTTTaGGTGGGTTTTAGCTGGCTT +
Preference number: 3 (lower is better)
Translates to: QISVGQTIQDPALAALSMITVLV*VGFSWL
Trigger: AAGCCAGCTAAAACCCACCAAAACCAAGACGGTGAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GCCATTTGTATTGCTCCTGTTACCAGAAAGCGGTCGTaGTCCAGTCCCCAAGAGAGAGTTCTTGGACCTTGC +
Preference number: 3 (lower is better)
Translates to: AICIAPVTRKRS*SSPQERVLGPC
Trigger: GCAAGGTCCAAGAACTCTCTCTTGGGGACTGGATCACGACCGCTTTCTGGTAACAGGAGCAATACAAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp GTAGGCAGCCCATCCATTTCAGTTCTCAGGACACTATaGTCAGCAGGCAGACATCACAGATCTCTGTGGGTC +
Preference number: 3 (lower is better)
Translates to: VGSPSISVLRTL*SAGRHHRSLWV
Trigger: GACCCACAGAGATCTGTGATGTCTGCCTGCTGATCATAGTGTCCTGAGAACTGAAATGGATGGGCTGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GGCAGCCAGACTTTATGTTCTCCTCAGGTCTTCAGGTaGTTGGATGAAGCCCACCCACAGATAGAGGGCAAT +
Preference number: 3 (lower is better)
Translates to: GSQTLCSPQVFR*LDEAHPQIEGN
Trigger: ATTGCCCTCTATCTGTGGGTGGGCTTCATCCAATCACCTGAAGACCTGAGGAGAACATAAAGTCTGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 72 bp TGTCTTCTGGGCACCATTTCAGCTCACAGCAACCTCTaGCTCCTGTGTTCAAGCTATTCTCCCATCTTAGCC +
Preference number: 3 (lower is better)
Translates to: CLLGTISAHSNL*LLCSSYSPILA
Trigger: GGCTAAGATGGGAGAATAGCTTGAACACAGGAGGCAGAGGTTGCTGTGAGCTGAAATGGTGCCCAGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp TGTAAAGATCCAAGATGGCAGGATTTTCATCTGTTCTaGTCCCTGCTGGGTCTCTGGCAAACACACCAGCGC +
Preference number: 3 (lower is better)
Translates to: CKDPRWQDFHLF*SLLGLWQTHQR
Trigger: GCGCTGGTGTGTTTGCCAGAGACCCAGCAGGGACCAGAACAGATGAAAATCCTGCCATCTTGGATCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp CACAGTTTGAACTTCCCCTCTGACGCAAAGAGGAAGTaGCTGGGCTTTCTTATCAGCTTGTCCAGATCCAGG +
Preference number: 3 (lower is better)
Translates to: HSLNFPSDAKRK*LGFLISLSRSR
Trigger: CCTGGATCTGGACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTGCGTCAGAGGGGAAGTTCAAACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp AAAAGGTTCCCAATCCAGACCCCAAGAGAGGGTTCTTaGATCTCGCACAAGAAAGAATTCAGGGCGAGTCCG +
Preference number: 3 (lower is better)
Translates to: KRFPIQTPREGS*ISHKKEFRASP
Trigger: CGGACTCGCCCTGAATTCTTTCTTGTGCGAGATCCAAGAACCCTCTCTTGGGGTCTGGATTGGGAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGCCACAGGCCAAACTaGAAGACAAATCTAGGATCC +
Preference number: 3 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGHRPN*KTNLGS
Trigger: GGATCCTAGATTTGTCTTCAAGTTTGGCCTGTGGCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGCCACAGGCCAAACTaGAAGACAAATCTAGGATCC +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGHRPN*KTNLGS
Trigger: GGATCCTAGATTTGTCTTCAAGTTTGGCCTGTGGCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGATTTCACCTTCTCAGTaGAGGCCCTCCCTGACCAGA +
Preference number: 3 (lower is better)
Translates to: KIQKRSGEESDLWELAARISPSQ*RPSLTR
Trigger: TCTGGTCAGGGAGGGCCTCAACTGAGAAGGTGAAAT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCTTTTACTGAGTCCTaGGATCTGTGGTTAACCCTT +
Preference number: 3 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPFTES*DLWLTL
Trigger: AAGGGTTAACCACAGATCCAAGGACTCAGTAAAAGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 3 (lower is better)
Translates to: LILAFCFNTSGWASEGAPSRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATTCCTGCTTTGCACTTaGCTCCACATGAGGTGGGAT +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGFLLCT*LHMRWD
Trigger: ATCCCACCTCATGTGGAGCAAAGTGCAAAGCAGGAA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp CTGATCTCCCAATCCAGCACTCCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACACACATCACCATCCAG +
Preference number: 3 (lower is better)
Translates to: LISQSSTPSALL*FTLSTTHITIQ
Trigger: CTGGATGGTGATGTGTGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGGAGTGCTGGATTGGGAGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp GCTTGTCCAGATCCAGGCAAACTGAGGGGGAGAGCTTaGATGCTATTAGCAGACAAACGTCAAACATGGGGA +
Preference number: 3 (lower is better)
Translates to: ACPDPGKLRGRA*MLLADKRQTWG
Trigger: TCCCCATGTTTGACGTTTGTCTGCTAATAGCATTCAAGCTCTCCCCCTCAGTTTGCCTGGATCTGGACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp GTCATTCTCCAAGATCCATCTGTCTTCTGCACAGGCTaGGTAGGTGAGCTAAGTGGAGATGTGTTCCCGTCT +
Preference number: 3 (lower is better)
Translates to: VILQDPSVFCTG*VGELSGDVFPS
Trigger: AGACGGGAACACATCTCCACTTAGCTCACCTACTCAGCCTGTGCAGAAGACAGATGGATCTTGGAGAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp CACCTGCTGTGGAGCAGGATTAGTAGATGGTGTGCATaGACTCTGAAGGCAGTCTGCGGAAGAATTCTCTCT +
Preference number: 3 (lower is better)
Translates to: HLLWSRISRWCA*TLKAVCGRILS
Trigger: AGAGAGAATTCTTCCGCAGACTGCCTTCAGAGTTCATGCACACCATCTACTAATCCTGCTCCACAGCAGGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 72 bp TCATCCCATGACTTGGAATGCCTAACCTCCTGGGAATaGAGCCCAGTAGGTCTCAGCCTTATTTTACCCAGT +
Preference number: 3 (lower is better)
Translates to: SSHDLECLTSWE*SPVGLSLILPS
Trigger: ACTGGGTAAAATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCCAAGTCATGGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 72 bp TTGTGCCAATCTCCTATCTCATCCCGTGACTTAGAATaGCTTAACCGTCTGGGAATGCAGCCCAGTAGGTCT +
Preference number: 3 (lower is better)
Translates to: LCQSPISSRDLE*LNRLGMQPSRS
Trigger: AGACCTACTGGGCTGCATTCCCAGACGGTTAAGGCATTCTAAGTCACGGGATGAGATAGGAGATTGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp CAAGATCAATCCTGCCAAGAAAAGGCACACCATGCCTaGAACCCAGATCTGATGACTCCAAGACCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: QDQSCQEKAHHA*NPDLMTPRPFL
Trigger: TAGGAAGGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCAGGATTGATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp AGAACCAGGAGAATACATATTCCAGTGAGAGCCCAGTaGCACCTGCTGTGGAGCAGGATTAGTAGATGGTGT +
Preference number: 3 (lower is better)
Translates to: RTRRIHIPVRAQ*HLLWSRISRWC
Trigger: ACACCATCTACTAATCCTGCTCCACAGCAGGTGCCACTGGGCTCTCACTGGAATATGTATTCTCCTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGGCCACAGGCCAAACTaGAAGACAAATCTAGGATCC +
Preference number: 3 (lower is better)
Translates to: KIQKRSGEESDLWELAARGHRPN*KTNLGS
Trigger: GGATCCTAGATTTGTCTTCAAGTTTGGCCTGTGGCC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCATTTCACCTTCTCAGTaGAGGCCCTCCCTGACCAGA +
Preference number: 3 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIISPSQ*RPSLTR
Trigger: TCTGGTCAGGGAGGGCCTCAACTGAGAAGGTGAAAT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATACACTAAGGGTACCTaGTATGTAGCTTCACCAACT +
Preference number: 3 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAYTKGT*YVASPT
Trigger: AGTTGGTGAAGCTACATACAAGGTACCCTTAGTGTA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCAGGGTTTGCACAGTTaGAACTTCCCCTCTGACGCA +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWQGLHS*NFPSDA
Trigger: TGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATTTGACAGTCAGGGTTaGCACAGTTTGAACTTCCCC +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGFDSQG*HSLNFP
Trigger: GGGGAAGTTCAAACTGTGCAAACCCTGACTGTCAAA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GCAAACCAGTTGTCAGACGTATCGTTTGCTCAGCACTaGAACCACATGTGGAAACAGCACCTGCACTTGGAA +
Preference number: 3 (lower is better)
Translates to: ANQLSDVSFAQH*NHMWKQHLHLE
Trigger: TTCCAAGTGCAGGTGCTGTTTCCACATGTGGTTTCAGTGCTGAGCAAACGATACGTCTGACAACTGGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 72 bp AGAACAGAACAAACCTGGGCCTGGCTCAGTAACAACTaGAAACCAGTTGTCAGACGTATCGTTTGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: RTEQTWAWLSNN*KPVVRRIVCSA
Trigger: TGCTGAGCAAACGATACGTCTGACAACTGGTTTGCAGTTGTTACTGAGCCAGGCCCAGGTTTGTTCTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp CCTATCTCATCCCATGACTTGGAATGCCTAACCTCCTaGGAATGCAGCCCAGTAGGTCTCAGCCTTATTTTA +
Preference number: 3 (lower is better)
Translates to: PISSHDLECLTS*ECSPVGLSLIL
Trigger: TAAAATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCCAAGTCATGGGATGAGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp CCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTaGGTGCCTTTGGGGAGGCCTAGGAAGATAAAAAGT +
Preference number: 3 (lower is better)
Translates to: PFPMHNHSDKWP*VPLGRPRKIKS
Trigger: ACTTTTTATCTTCCTAGGCCTCCCCAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATaGCCTTGGGTGCCTTTGGGGAGGCCTAGGAAGATA +
Preference number: 3 (lower is better)
Translates to: YLPFPMHNHSDK*PWVPLGRPRKI
Trigger: TATCTTCCTAGGCCTCCCCAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp GAATTAAGGAGGCTGGCAAGTCCCAAATCTTCAGGGTaGATGAGCAGGCTGGAGAACCAGGAGAATACATAT +
Preference number: 3 (lower is better)
Translates to: ELRRLASPKSSG*MSRLENQENTY
Trigger: ATATGTATTCTCCTGGTTCTCCAGCCTGCTCATCCACCCTGAAGATTTGGGACTTGCCAGCCTCCTTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCGTATCCCATTTGTTaGTCATCTGTAAAGATCCAA +
Preference number: 3 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPAYPIC*SSVKIQ
Trigger: TTGGATCTTTACAGATGACAAACAAATGGGATACGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACCTTTTACTGAGTCCTaGGATCTGTGGTTAACCCTT +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGPFTES*DLWLTL
Trigger: AAGGGTTAACCACAGATCCAAGGACTCAGTAAAAGG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACC +
Preference number: 3 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATCSFG*NLIAST
Trigger: GGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAGACATCTTCCAGGTaGGTTTCTTCTCATTTCAAG +
Preference number: 3 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKTSSR*VSSHFK
Trigger: CTTGAAATGAGAAGAAACCAACCTGGAAGATGTCTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATACCTCCAAGACACCTaGGCATTTTCTTCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGYLQDT*AFSSCL
Trigger: AAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGTA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGAGAGCTCAGTGCATTaGACAGTCAGGGTTTGCACA +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWESSVH*TVRVCT
Trigger: TGTGCAAACCCTGACTGTCAAATGCACTGAGCTCTC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTACTGCGTATCCCATTaGTTTGTCATCTGTAAAGAT +
Preference number: 3 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPYCVSH*FVICKD
Trigger: ATCTTTACAGATGACAAACAAATGGGATACGCAGTA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTACTGCGTATCCCATTaGTTTGTCATCTGTAAAGAT +
Preference number: 3 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPYCVSH*FVICKD
Trigger: ATCTTTACAGATGACAAACAAATGGGATACGCAGTA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGGCAGAATGGTGACTaGCACACATCGTTCCAATAC +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWRQNGD*HTSFQY
Trigger: GTATTGGAACGATGTGTGCAAGTCACCATTCTGCCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTTGACAGTCAGGGTTaGCACAGTTTGAACTTCCCC +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWFDSQG*HSLNFP
Trigger: GGGGAAGTTCAAACTGTGCAAACCCTGACTGTCAAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCTCTTTGTTCCTGCTTaGCACTTTGCTCCACATGAG +
Preference number: 3 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLFVPA*HFAPHE
Trigger: CTCATGTGGAGCAAAGTGCAAAGCAGGAACAAAGAG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAACGTCAGCGGACTTTaGGAAGACATATACCTCAGG +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWNVSGL*EDIYLR
Trigger: CCTGAGGTATATGTCTTCCAAAAGTCCGCTGACGTT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAACGTCAGCGGACTTTaGGAAGACATATACCTCAGG +
Preference number: 3 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLNVSGL*EDIYLR
Trigger: CCTGAGGTATATGTCTTCCAAAAGTCCGCTGACGTT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGCAAAATTATGCAATTaGGAGAGTACTGTATCTCCT +
Preference number: 3 (lower is better)
Translates to: QISVGQTIQDPALAALSMAKLCN*ESTVSP
Trigger: AGGAGATACAGTACTCTCCAAATTGCATAATTTTGC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GGTTCAAACGCCTCTGACACTCCCAATTTTTGCAGGTaGGGAAATGGAAGCCTTGAAAGATTAGGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: GSNASDTPNFCR*GNGSLERLGGS
Trigger: TGAGCCACCTAATCTTTCAAGGCTTCCATTTCCTCACCTGCAAAAATTGGGAGTGTCAGAGGCGTTTGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp AGGACGAACAAGTGGCTCTGGTTTTTGTTGTGGTTATaGGAGCTCAGTGCATTTGACAGTCAGGGTTTGCAC +
Preference number: 3 (lower is better)
Translates to: RTNKWLWFLLWL*ELSAFDSQGLH
Trigger: GTGCAAACCCTGACTGTCAAATGCACTGAGCTCTCATAACCACAACAAAAACCAGAGCCACTTGTTCGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 72 bp TGCTTTATCAGCAAGGTCTTTGTGGCCTGGATCTTGTaGCAATCTCCTATCTCATCCCGTGACTTAGAATGC +
Preference number: 3 (lower is better)
Translates to: CFISKVFVAWIL*QSPISSRDLEC
Trigger: GCATTCTAAGTCACGGGATGAGATAGGAGATTGGCACAAGATCCAGGCCACAAAGACCTTGCTGATAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp TGGCTACTCCATAGACAGAGCAGCCCCGAGGGCTGCTaGTTGTCTATTTTATGGTTTCTTGATGATATGCTA +
Preference number: 3 (lower is better)
Translates to: WLLHRQSSPEGC*LSILWFLDDML
Trigger: TAGCATATCATCAAGAAACCATAAAATAGACAACCAGCAGCCCTCGGGGCTGCTCTGTCTATGGAGTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp TCATGGATTCATCCCTGCAGTAGGTTCATTTTCAGGTaGAAGTGTAGGAAGCACAGGAGATCACAGAAGACC +
Preference number: 3 (lower is better)
Translates to: SWIHPCSRFIFR*KCRKHRRSQKT
Trigger: GGTCTTCTGTGATCTCCTGTGCTTCCTACACTTCCACCTGAAAATGAACCTACTGCAGGGATGAATCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGCGTATCCCATTTGTTaGTCATCTGTAAAGATCCAA +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGAYPIC*SSVKIQ
Trigger: TTGGATCTTTACAGATGACAAACAAATGGGATACGC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGAGAGTTCTTGGACCTaGCTCAAGAAAAGAATTCGG +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWESSWT*LKKRIR
Trigger: CCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCTC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTACCTCCAAGACACCTaGGCATTTTCTTCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLYLQDT*AFSSCL
Trigger: AAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGTA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp TCTGATTTATGGGAACTGGCAGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTTACTGAGTCCTTGGAT +
Preference number: 3 (lower is better)
Translates to: SDLWELAARLTA*EAFHPFTESLD
Trigger: ATCCAAGGACTCAGTAAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGCTGCCAGTTCCCATAAATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 72 bp ATTACAGCAGTGAGGACAACCAGAGGTCACTTTCATTaGCATCTTGGTTTTGACCGGCTTCTTTACCACATG +
Preference number: 3 (lower is better)
Translates to: ITAVRTTRGHFH*HLGFDRLLYHM
Trigger: CATGTGGTAAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCTGGTTGTCCTCACTGCTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 72 bp TTTTGGTGGGTTTTAGCTGGCTTCTTTACTGCAACCTaGTTTATCAGCAAGGTCTTTGTGGCCTGGATCTTG +
Preference number: 3 (lower is better)
Translates to: FWWVLAGFFTAT*FISKVFVAWIL
Trigger: CAAGATCCAGGCCACAAAGACCTTGCTGATAAAGCAGGTTGCAGTAAAGAAGCCAGCTAAAACCCACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp CACTTCTCTAGGATGCATCCAGGAGTAGTTGCTGGGTaGTTAAGTGCACACAACCTTCCAAGATTTTGCAAA +
Preference number: 3 (lower is better)
Translates to: HFSRMHPGVVAG*LSAHNLPRFCK
Trigger: TTTGCAAAATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCAACTACTCCTGGATGCATCCTAGAGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp TCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGTTaGGGGGATTTCTTCAGTATCATCCTTTCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: SSNQCCSLFLWG*GDFFSIILSVV
Trigger: AACCACAGAAAGGATGATACTGAAGAAATCCCCCCAACCCCAAAGAAATAGACTGCAGCACTGATTGGACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp TTGATTTACTGTGTGAGAACAGAACAAACCTGGGCCTaGCTCAGTAACAACTGCAAACCAGTTGTCAGACGT +
Preference number: 3 (lower is better)
Translates to: LIYCVRTEQTWA*LSNNCKPVVRR
Trigger: ACGTCTGACAACTGGTTTGCAGTTGTTACTGAGCCAGGCCCAGGTTTGTTCTGTTCTCACACAGTAAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGCGTATCCCATTTGTTaGTCATCTGTAAAGATCCAA +
Preference number: 3 (lower is better)
Translates to: KIQKRSGEESDLWELAARAYPIC*SSVKIQ
Trigger: TTGGATCTTTACAGATGACAAACAAATGGGATACGC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGACTTTCATTGCCATCTaGGTTTTGACCGGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWTFIAI*VLTGFF
Trigger: AAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATTTACTAATAGCCATTaGTATTGCTCCTGTTACCAG +
Preference number: 3 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGFTNSH*YCSCYQ
Trigger: CTGGTAACAGGAGCAATACAAATGGCTATTAGTAAA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGGGGAGGGATAGCATaGGGAGATATACCTAATGCT +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGGGIA*GDIPNA
Trigger: AGCATTAGGTATATCTCCCAATGCTATCCCTCCCCC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACCAAGAGGTGGCCTTTaGACATCAGAGGGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPPRGGL*TSEGQK
Trigger: TTTTTGGCCCTCTGATGTCAAAAGGCCACCTCTTGG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp AGAGCCATTCTCCCATCTCCTCACTGGACAGCCTTGTaGATAATTCTTCTCTCTTTTGCAAAACCCATGTCA +
Preference number: 3 (lower is better)
Translates to: RAILPSPHWTAL*IILLSFAKPMS
Trigger: TGACATGGGTTTTGCAAAAGAGAGAAGAATTATTCACAAGGCTGTCCAGTGAGGAGATGGGAGAATGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 72 bp TCCACGCACTTACCCACACTTGGGCTTTCAAAAATGTaGCAGCTTTCTGAGTGTGAGATGGTCTGTATTATT +
Preference number: 3 (lower is better)
Translates to: STHLPTLGLSKM*QLSECEMVCII
Trigger: AATAATACAGACCATCTCACACTCAGAAAGCTGGCACATTTTTGAAAGCCCAAGTGTGGGTAAGTGCGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp TGGGATTCTGTCACTAGCTTCCAAAACAGAAAGGGCTaGGCCCTTTATCAAAGTTACTCCACAATGCCTATA +
Preference number: 3 (lower is better)
Translates to: WDSVTSFQNRKG*ALYQSYSTMPI
Trigger: TATAGGCATTGTGGAGTAACTTTGATAAAGGGCCCAGCCCTTTCTGTTTTGGAAGCTAGTGACAGAATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp GTATCCCATTTGTTTGTCATCTGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTCTGGTCCCTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: VSHLFVICKDPR*QDFHLFWSLLG
Trigger: ACCCAGCAGGGACCAGAACAGATGAAAATCCTGCCATCTTGGATCTTTACAGATGACAAACAAATGGGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp TCAGGGAAGGCCATTACATGTTCTTCAGGCAAAAGGTaGTTAACTAACACTCAAAGTCTCATTGTGACCCTC +
Preference number: 3 (lower is better)
Translates to: SGKAITCSSGKR*LTNTQSLIVTL
Trigger: GAGGGTCACAATGAGACTTTGAGTGTTAGTTAACCACCTTTTGCCTGAAGAACATGTAATGGCCTTCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CCA 72 bp ATTCTCATCACCGTCTTGGTTTTGGTGGGTTTTAGCTaGCTTCTTTACTGCAACCTGCTTTATCAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: ILITVLVLVGFS*LLYCNLLYQQG
Trigger: ACCTTGCTGATAAAGCAGGTTGCAGTAAAGAAGCCAGCTAAAACCCACCAAAACCAAGACGGTGATGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACC +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPTCSFG*NLIAST
Trigger: GGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAAGACATCTTCCAGGTaGGTTTCTTCTCATTTCAAG +
Preference number: 3 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLKTSSR*VSSHFK
Trigger: CTTGAAATGAGAAGAAACCAACCTGGAAGATGTCTT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCCAAGATTTTGCAAATaGCCTGGCACAATATTTCTC +
Preference number: 3 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLPRFCK*PGTIFL
Trigger: GAGAAATATTGTGCCAGGCAATTTGCAAAATCTTGG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATCCAGTTCAAACCAGTaGAGACTGCCAACCCTTCAA +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSSSNQ*RLPTLQ
Trigger: TTGAAGGGTTGGCAGTCTCAACTGGTTTGAACTGGA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp AAGTTTCCCGGGAAAGGTGTGAGCAATTACCAGAACTaGGGGTTCCTCTCCTTTTTAGACCATATAGTGTTA +
Preference number: 3 (lower is better)
Translates to: KFPGKGVSNYQN*GFLSFLDHIVL
Trigger: TAACACTATATGGTCTAAAAAGGAGAGGAACCCTCAGTTCTGGTAATTGCTCACACCTTTCCCGGGAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp ACGTCTCTTTGTTCCTGCTTTGCACTTTGCTCCACATaGGGTGGGATCAATAAACTACCATCACTCAAAACT +
Preference number: 3 (lower is better)
Translates to: TSLCSCFALCST*GGINKLPSLKT
Trigger: AGTTTTGAGTGATGGTAGTTTATTGATCCCACCTCATGTGGAGCAAAGTGCAAAGCAGGAACAAAGAGACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR GCA 72 bp TTACTTAAGCGTTCGTTTACTAATAGCCATTTGTATTaGTCCTGTTACCAGAAAGCGGTCGTGATCCAGTCC +
Preference number: 3 (lower is better)
Translates to: LLKRSFTNSHLY*SCYQKAVVIQS
Trigger: GGACTGGATCACGACCGCTTTCTGGTAACAGGAGCAATACAAATGGCTATTAGTAAACGAACGCTTAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp CCACACAATATCAGAGCCTTCATTTTCACCTGCTCATaGCAATCCAGAGCAGGTAAGATTATTCCATACTCT +
Preference number: 3 (lower is better)
Translates to: PHNIRAFIFTCS*QSRAGKIIPYS
Trigger: AGAGTATGGAATAATCTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACCTTTTACTGAGTCCTaGGATCTGTGGTTAACCCTT +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPPFTES*DLWLTL
Trigger: AAGGGTTAACCACAGATCCAAGGACTCAGTAAAAGG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACCCAAGGGCTGCTGGTaGCCTATTTTTATGGTTATT +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPPKGCW*PIFMVI
Trigger: AATAACCATAAAAATAGGCAACCAGCAGCCCTTGGG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTTACTAATAGCCATTaGTATTGCTCCTGTTACCAG +
Preference number: 3 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWFTNSH*YCSCYQ
Trigger: CTGGTAACAGGAGCAATACAAATGGCTATTAGTAAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAAAAAGTATAAATTATaGTCAGTGCAGCAGGGTCCT +
Preference number: 3 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLKKYKL*SVQQGP
Trigger: AGGACCCTGCTGCACTGACAATAATTTATACTTTTT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp GACATGAACACAACAATGGTAAGCGTTTATATCTGCTaGGGCCGAGGATCCTATAGAAAATTCAGAAACGGA +
Preference number: 3 (lower is better)
Translates to: DMNTTMVSVYIC*GRGSYRKFRNG
Trigger: TCCGTTTCTGAATTTTCTATAGGATCCTCGGCCTCAGCAGATATAAACGCTTACCATTGTTGTGTTCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp TTTTATTGGCAAGGTCTTTATGACTGTATCTTGTGCTaGCCTCCTATCTCATCCCATGACTTGGAATGCCTA +
Preference number: 3 (lower is better)
Translates to: FYWQGLYDCILC*PPISSHDLECL
Trigger: TAGGCATTCCAAGTCATGGGATGAGATAGGAGGTCAGCACAAGATACAGTCATAAAGACCTTGCCAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp TCTTTACCACATGCTGTTTTATTGGCAAGGTCTTTATaGCTGTATCTTGTGCTGACCTCCTATCTCATCCCA +
Preference number: 3 (lower is better)
Translates to: SLPHAVLLARSL*LYLVLTSYLIP
Trigger: TGGGATGAGATAGGAGGTCAGCACAAGATACAGTCATAAAGACCTTGCCAATAAAACAGCATGTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 72 bp CACTTTGTCCACTACACACATCACCATCCAGAATACTaGGTATCCCATTTGTTTGTCATCTGTAAAGATCCA +
Preference number: 3 (lower is better)
Translates to: HFVHYTHHHPEY*VSHLFVICKDP
Trigger: TGGATCTTTACAGATGACAAACAAATGGGATACGCAGTATTCTGGATGGTGATGTGTGTAGTGGACAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp TACTTGGCCTTTTCTACCAGAATTACTTTTACTGTATaGATCAGGGAACTAGTGTGGGATTCTGCCCATTGT +
Preference number: 3 (lower is better)
Translates to: YLAFSTRITFTV*IRELVWDSAHC
Trigger: ACAATGGGCAGAATCCCACACTAGTTCCCTGATCCATACAGTAAAAGTAATTCTGGTAGAAAAGGCCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR TCA 72 bp AAGGCTAACTGCATGAGAAGCCTTTCACCCTTTTACTaGGTCCTTGGATCTGTGGTTAACCCTTATAAAATA +
Preference number: 3 (lower is better)
Translates to: KANCMRSLSPFY*VLGSVVNPYKI
Trigger: TATTTTATAAGGGTTAACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR TCA 72 bp AACTTCACACATAAGGAAATTGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCCTGCCAAGAAAAGGCA +
Preference number: 3 (lower is better)
Translates to: NFTHKEIDAEVH*LAQDQSCQEKA
Trigger: TGCCTTTTCTTGGCAGGATTGATCTTGAGCAAGTCAATGAACCTCTGCATCAATTTCCTTATGTGTGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR GCA 72 bp ATTGCCATCTTGGTTTTGACCGGCTTCTTTACCACATaGTGTTTTATTGGCAAGGTCTTTATGACTGTATCT +
Preference number: 3 (lower is better)
Translates to: IAILVLTGFFTT*CFIGKVFMTVS
Trigger: AGATACAGTCATAAAGACCTTGCCAATAAAACAGCATGTGGTAAAGAAGCCGGTCAAAACCAAGATGGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CCA 72 bp TGTTCTTTGTTGCCTGTGTTTTTCATTTTAAGTCGGTaGAGTTACAACCCATGGATTCCTTTGTGTCTGCTT +
Preference number: 3 (lower is better)
Translates to: CSLLPVFFILSR*SYNPWIPLCLL
Trigger: AAGCAGACACAAAGGAATCCATGGGTTGTAACTCCACCGACTTAAAATGAAAAACACAGGCAACAAAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATACTGCGTATCCCATTaGTTTGTCATCTGTAAAGAT +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPYCVSH*FVICKD
Trigger: ATCTTTACAGATGACAAACAAATGGGATACGCAGTA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGAAAAGTCTAATTATTaGCCCTTCCCAATGCACAAT +
Preference number: 3 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPEKSNY*PFPMHN
Trigger: ATTGTGCATTGGGAAGGGCAAATAATTAGACTTTTC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTCGGGAGGCTCAGATaGGACCTGAGCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLGRLR*DLSLGG
Trigger: ACCTCCCAGGCTCAGGTCCCATCTGAGCCTCCCGAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGCCTCCCGAGTAGCTaGGACTACAGGCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSLPSS*DYRRPL
Trigger: CAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTCCTCCACCTGCCGCTaGGACCACTCTAACCCCCTA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSSTCR*DHSNPL
Trigger: TAGGGGGTTAGAGTGGTCTCAGCGGCAGGTGGAGGA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAGGGGCTTCCTTCCTaGGGACACCAGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQGLPS*GHQSRP
Trigger: GGGTCTTGACTGGTGTCCTCAGGAAGGAAGCCCCTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGSDGT*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGCAGGAGAATGGTGTaGGCCCAGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGRRMV*AQEAEL
Trigger: AAGCTCTGCCTCCTGGGCTCACACCATTCTCCTGCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGCTGGGCGGCAGAGTTaGGGCAGCCTTGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPAGRQS*GSLEIG
Trigger: CCCTATCTCAAGGCTGCCTCAACTCTGCCGCCCAGC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGGCAGCATGCCACCTaGCTGGAGGCATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRQHAT*LEASLL
Trigger: CAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGGCATGAGCCATCGTaGCAGGCCTGCCATGGCGTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRHEPS*QACHGV
Trigger: AACGCCATGGCAGGCCTGGCACGATGGCTCATGCCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCACCCCCACTCGTCCTaGGAGAAGGTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRHPHSS*EKVTST
Trigger: TGTGGAGGTGACCTTCTCCCAGGACGAGTGGGGGTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTCCTTCTTTACTGTCTaGAGCCGCCCTCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSFFTV*SRPRSL
Trigger: GAGGGAGCGAGGGCGGCTTCAGACAGTAAAGAAGGA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTCTCTAGCAGGGGACTaGGAACCCACCCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSLAGD*EPTPTV
Trigger: GACAGTGGGGGTGGGTTCTCAGTCCCCTGCTAGAGA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTCCTCCACCTGCCGCTaGGACCACTCTAACCCCCTA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSSTCR*DHSNPL
Trigger: TAGGGGGTTAGAGTGGTCTCAGCGGCAGGTGGAGGA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACTCCCTGCCTCCCTCTaGGCCAGCTCAAGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALPASL*ASSSPR
Trigger: ACGGGGGCTTGAGCTGGCTCAGAGGGAGGCAGGGAG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGCTGCCTTTTCTCCTaGGAGCAGCAGGCACATGCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGCLFS*EQQAHA
Trigger: TGCATGTGCCTGCTGCTCTCAGGAGAAAAGGCAGCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGCTGCAGTAAGCTGTaGTCCTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGCSKL*SCHCTP
Trigger: TGGAGTGCAGTGGCAGGATCACAGCTTACTGCAGCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTGGTCTCAATCTCCTaGCCTCATAATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLVSIS*PHNPPA
Trigger: GGCGGGCGGATTATGAGGTCAGGAGATTGAGACCAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCACTCCCGTTCTCAGGTaGTCTGCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPTPVLR*SAHLSL
Trigger: GAGGCTGAGGTGGGCAGATCACCTGAGAACGGGAGT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCCCCATGGCTCCCTTaGTTCCAACCAGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRAPWLP*FQPGDQ
Trigger: CTGATCTCCTGGTTGGAAGCAAGGGAGCCATGGGGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCCCTTAGGCTGAGCTaGCTGCATGTTCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPLRLS*LHVQAP
Trigger: TGGGGCCTGAACATGCAGGCAGCTCAGCCTAAGGGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGACTGGGCCTGAGCTaGATAGGCAGCATGCCACCT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRLGLS*IGSMPP
Trigger: AGGTGGCATGCTGCCTATCCAGCTCAGGCCCAGTCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTGCACATCTGGGCTCTaGGCAGGGCCCGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPCTSGL*AGPGSL
Trigger: GAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGCACATCTGGGCTCTaGGCAGGGCCCGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLACTSGL*AGPGSL
Trigger: GAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATGGTCTCCTGGAGCTaGGCTGTCAGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRMVSWS*AVRDLV
Trigger: AACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCATGCCGCGCACAGTTaGAACTCCACCGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRHAAHS*NSTGRL
Trigger: AAGCCTTCCGGTGGAGTTCCAACTGTGCGCGGCATG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGTAGCGAAGCTGTCTaGAGAGCTGGCGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGSEAV*RAGGTA
Trigger: AGCTGTTCCGCCAGCTCTTCAGACAGCTTCGCTACC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGATTCCCCTTAGGCTaGGCTGCCTGCATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGFPLG*AACMFR
Trigger: CCTGAACATGCAGGCAGCTCAGCCTAAGGGGAATCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTCAACTTTGTGTCCTaGGAGGAAGACCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLNFVS*EEDRAG
Trigger: GCCTGCACGGTCTTCCTCTCAGGACACAAAGTTGAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCCCCCACCATCCTGTaGCACCACCACACAATATCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRAPTIL*HHHTIS
Trigger: TGATATTGTGTGGTGGTGTCACAGGATGGTGGGGGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGTCTGATGGGGTTATaGGAGAAATGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGLMGL*EKCPGR
Trigger: CCTCCCTGGGCATTTCTCTCATAACCCCATCAGACC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGAATTCTCTCTTGCCTaGGAGAGAGTCTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGREFSLA*ERVWGS
Trigger: GCTGCCCCAGACTCTCTCTCAGGCAAGAGAGAATTC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCTGTACCCATCCAATaGACATCTGGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPVPIQ*TSGLWA
Trigger: TGCCCAGAGCCCAGATGTGCATTGGATGGGTACAGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCGGAGATCGCGCCACTaGACTCTAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPRRSRH*TLAWVT
Trigger: TGTTACCCAGGCTAGAGTGCAGTGGCGCGATCTCCG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACAGCCTGGGCAGCCCTaGGGGGCCCCACACTTAGAA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAQPGQP*GAPHLE
Trigger: TTCTAAGTGTGGGGCCCCGCAGGGCTGCCCAGGCTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGAGCCCAGTGGCACCTaGTGTGGAGCAGGATTAGTA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGREPSGT*CGAGLV
Trigger: TACTAATCCTGCTCCACAGCAGGTGCCACTGGGCTC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCATGGTCTCCTGGAGCTaGGCTGTCAGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPMVSWS*AVRDLV
Trigger: AACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCAT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAAAGTCATGGTCTCCTaGAGCTGGGCTGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRKVMVS*SWAVRD
Trigger: GTCCCTGACAGCCCAGCTCCAGGAGACCATGACTTT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGTGAGCCTGGAGCTCTaGCTGCAAGCTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRVSLEL*LQASLQ
Trigger: CTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCAC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPVGWG*QQGTGR
Trigger: TCTACCAGTACCCTGTTGCCATCCCCATCCCACAGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGGGTTTCACCATATTaGCCAGGCTGGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGVSPY*PGWLVS
Trigger: TGAGACCAGCCAGCCTGGCCAATATGGTGAAACCCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGTCTCAAGGCAGCCCTaGACTTTGGAAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRVSRQP*TLEGST
Trigger: AGTGCTGCCTTCCAAAGTCCAGGGCTGCCTTGAGAC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGTGAGCCACCGTGCCTaGCCTAAGCCTCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPVSHRA*PKPHCS
Trigger: AGAACAGTGAGGCTTAGGCCAGGCACGGTGGCTCAC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGACCCTGAGCTGTAGGTaGGAGCTGCCCTATACTGAT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRTLSCR*ELPYTD
Trigger: ATCAGTATAGGGCAGCTCTCACCTACAGCTCAGGGT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGAGCACCCTGGGGCTaGCTGCAGTCAGGAGATTGC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGAPWG*LQSGDC
Trigger: GCAATCTCCTGACTGCAGTCAGCCCCAGGGTGCTCC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACACACGCCAAGCGCTTaGGCCCAGCATCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAHTPSA*AQHPAL
Trigger: GAGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGACATCTTCAGTGCCATaGACAGCTGCTGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRTSSVP*TAAAVG
Trigger: TCCTACGGCAGCAGCTGTTCATGGCACTGAAGATGT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGSDGT*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCCTCCCTGGGTGGGTaGGCAGGTATTTACATGATA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPSLGG*AGIYMI
Trigger: TATCATGTAAATACCTGCTCACCCACCCAGGGAGGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCAGGAGGCGGAGGCTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAGCCTCCGCCTCCTGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGACGTTCAGCCTGTGCTaGTCTGGTGTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRTFSLC*SGVFPL
Trigger: CAGAGGAAACACACCAGAGCAGCACAGGCTGAACGT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCTACGTTCAGCCTGTaGTGCTCTGGTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRATFSL*CSGVFP
Trigger: AGGAAACACACCAGAGCAGCACAGGCTGAACGTAGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGACCGCTGCTGCCTATaGAGGCCTGTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPDRCCL*RPVGWG
Trigger: TCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGACCGCTGCTGCCTATaGAGGCCTGTGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPDRCCL*RPVGWG
Trigger: TCCCCATCCCACAGGCCTGCATAGGCAGCAGCGGTC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAAACAGATGGACCGCTaGTGCCTATGCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPKQMDR*CLCRPV
Trigger: CACAGGCCTGCATAGGCAGCAGCGGTCCATCTGTTT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGACCCAATCTCCTCTaGCTGCAACTCTCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRPNLL*LQLSLE
Trigger: CTCTAGGGAGAGTTGCAGGCAGAGGAGATTGGGTCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCAACAGGAGACTTCTaGCCCGCCCCCACCATCCTG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPTGDF*PAPTIL
Trigger: CAGGATGGTGGGGGCGGGGCAGAAGTCTCCTGTTGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAGGCCAGGATGAGATaGAAGATGAGACCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQARMR*KMRPGA
Trigger: AGCACCAGGTCTCATCTTGCATCTCATCCTGGCCTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCATCGTGCCAGGCCTaGCATGGCGTTTGTAAACTG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPSCQA*HGVCKL
Trigger: CAGTTTACAAACGCCATGGCAGGCCTGGCACGATGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTTCGCCTGCCCCGCTTaGTTTTGGTTGCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRFACPA*FWLLAL
Trigger: AAGAGCAAGCAACCAAAAGCAAGCGGGGCAGGCGAA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCAGGAGGTGCAGGTTaGAGTGAGCCAAGATTGCCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPGGAG*SEPRLP
Trigger: AGGCAATCTTGGCTCACTGCAACCTGCACCTCCTGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTTGTCCAGGCTGGAGTaGAGTGGCACTATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLSRLE*SGTISA
Trigger: AGCCGAGATAGTGCCACTGCACTCCAGCCTGGACAA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTGGCGGAACAGCTCCTaGCCAGGGCGGTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPWRNSS*PGRLRV
Trigger: GACTCTCAACCGCCCTGGCCAGGAGCTGTTCCGCCA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTAGGATCTGTGCCTTaGAGAGAACGTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLGSVP*RERQAS
Trigger: TGAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTGCACATCTGGGCTCTaGGCAGGGCCCGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPCTSGL*AGPGSL
Trigger: GAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCATCCAATGCACATCTaGGCTCTGGGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPHPMHI*ALGRAR
Trigger: CCGGGCCCTGCCCAGAGCCCAGATGTGCATTGGATG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACATCCAATGCACATCTaGGCTCTGGGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAHPMHI*ALGRAR
Trigger: CCGGGCCCTGCCCAGAGCCCAGATGTGCATTGGATG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAAAAGGGCAGGCATCTaGGCAGCAGGAGTATCGGAT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRKRAGI*AAGVSD
Trigger: ATCCGATACTCCTGCTGCCCAGATGCCTGCCCTTTT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTGTAGGAGCAGCAACTaGATTCCCCTTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRCRSSN*IPLRLS
Trigger: GCTCAGCCTAAGGGGAATCCAGTTGCTGCTCCTACA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPVGWG*QQGTGR
Trigger: TCTACCAGTACCCTGTTGCCATCCCCATCCCACAGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAAAGGGAGCAGAGATaGGGGGAAAGGGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQREQR*GERGAK
Trigger: TTTAGCACCCCTTTCCCCCCATCTCTGCTCCCTTTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCTCGGGAGGCTCAGATaGGACCTGAGCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMLGRLR*DLSLGG
Trigger: ACCTCCCAGGCTCAGGTCCCATCTGAGCCTCCCGAG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGAATGCCTAACCTCCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRECLTS*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCACCAGATGGGTAACTaGGCAGCCAAGGGGATAATC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRHQMGN*AAKGII
Trigger: GATTATCCCCTTGGCTGCCCAGTTACCCATCTGGTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGTCTCAAGGCAGCCCTaGACTTTGGAAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPVSRQP*TLEGST
Trigger: AGTGCTGCCTTCCAAAGTCCAGGGCTGCCTTGAGAC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTACCTGGGGACCTTGTaGCTCAGCCAAGTTGACACC +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPYLGTL*LSQVDT
Trigger: GGTGTCAACTTGGCTGAGCCACAAGGTCCCCAGGTA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAGTGGCACCTGCTGTaGAGCAGGATTAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQWHLL*SRISRW
Trigger: CCATCTACTAATCCTGCTCCACAGCAGGTGCCACTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCAGTGAGAGCCCAGTaGCACCTGCTGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPVRAQ*HLLWSR
Trigger: CCTGCTCCACAGCAGGTGCCACTGGGCTCTCACTGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGAGCAGAGCTGCTCCTaGGAGGTGAAGCAAGGGACC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAEQSCS*EVKQGT
Trigger: GGTCCCTTGCTTCACCTCTCAGGAGCAGCTCTGCTC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATGATGATCAAACCCTaGGCTGTAGGTGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRMMIKP*AVGESC
Trigger: GCAGCTCTCACCTACAGCTCAGGGTTTGATCATCAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGGTATGTCTCCCAATaGACTCTTTCCCACACCACT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGYVSQ*TLSHTT
Trigger: AGTGGTGTGGGAAAGAGTTCATTGGGAGACATACCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTCTCTAGCAGGGGACTaGGAACCCACCCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSLAGD*EPTPTV
Trigger: GACAGTGGGGGTGGGTTCTCAGTCCCCTGCTAGAGA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTCCTCCACCTGCCGCTaGGACCACTCTAACCCCCTA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSSTCR*DHSNPL
Trigger: TAGGGGGTTAGAGTGGTCTCAGCGGCAGGTGGAGGA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACAGGGGCTTCCTTCCTaGGGACACCAGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAQGLPS*GHQSRP
Trigger: GGGTCTTGACTGGTGTCCTCAGGAAGGAAGCCCCTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTCCCTGCCTCCCTCTaGGCCAGCTCAAGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARLPASL*ASSSPR
Trigger: ACGGGGGCTTGAGCTGGCTCAGAGGGAGGCAGGGAG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGGCAGGAGAATGGTGTaGGCCCAGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMGRRMV*AQEAEL
Trigger: AAGCTCTGCCTCCTGGGCTCACACCATTCTCCTGCC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAAAGAAAACACAACTaGAGGCCCCATGTACCCTCC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQRKHN*RPHVPS
Trigger: GGAGGGTACATGGGGCCTTCAGTTGTGTTTTCTTTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTTTGAACTTCCCCTCTaGCGCAAAGAGGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRFELPL*RKEEVA
Trigger: AGCCACTTCCTCTTTGCGTCAGAGGGGAAGTTCAAA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCACAGGGCCCCTCCCTaGGCACAGACACTATGTCAG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPHRAPP*AQTLCQ
Trigger: CTGACATAGTGTCTGTGCTCAGGGAGGGGCCCTGTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCTCAAAGTCTCATTGTaGCCCTCCCTTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLKVSL*PSLLLP
Trigger: AGGGAGCAGAAGGGAGGGTCACAATGAGACTTTGAG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCACTGACGCCCCACTaGGGAAAGGAATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAALTPH*GKEWLL
Trigger: CAGCAGCCATTCCTTTCCTCAGTGGGGCGTCAGTGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCACTGACGCCCCACTaGGGAAAGGAATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPALTPH*GKEWLL
Trigger: CAGCAGCCATTCCTTTCCTCAGTGGGGCGTCAGTGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACTCCCGTTCTCAGGTaGTCTGCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTPVLR*SAHLSL
Trigger: GAGGCTGAGGTGGGCAGATCACCTGAGAACGGGAGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGTAGATGGTGTGCATaGACTCTGAAGGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSRWCA*TLKAVC
Trigger: GCAGACTGCCTTCAGAGTTCATGCACACCATCTACT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCGAGATCATGCCATTaGACTCCAGCCTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPRSCH*TPALRK
Trigger: CTTTCGCAAGGCTGGAGTGCAATGGCATGATCTCGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGAGGAATGAGTGATTaGGGAAGGCCTTGCCACACT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGGMSD*GRPCHT
Trigger: AGTGTGGCAAGGCCTTCCGCAATCACTCATTCCTCC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCTCACAGCAACCTCTaGCTCCTGTGTTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRAHSNL*LLCSSY
Trigger: ATAGCTTGAACACAGGAGGCAGAGGTTGCTGTGAGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCTAGGATCTGTGCCTTaGAGAGAACGTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLGSVP*RERQAS
Trigger: TGAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGCACATCTGGGCTCTaGGCAGGGCCCGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGACTSGL*AGPGSL
Trigger: GAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAAAAGGGCAGGCATCTaGGCAGCAGGAGTATCGGAT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPKRAGI*AAGVSD
Trigger: ATCCGATACTCCTGCTGCCCAGATGCCTGCCCTTTT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCACCCCCACTCGTCCTaGGAGAAGGTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPHPHSS*EKVTST
Trigger: TGTGGAGGTGACCTTCTCCCAGGACGAGTGGGGGTG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTGTAGGGCTCCTCTTTaGAGTGACTGCTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRCRAPL*SDCSEE
Trigger: TTCCTCAGAGCAGTCACTCCAAAGAGGAGCCCTACA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGGTCGCTCTGTCTTCTaGGCACCATTTCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPGRSVF*APFQLT
Trigger: TGTGAGCTGAAATGGTGCCCAGAAGACAGAGCGACC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACATGCACATCTGGGCTCTaGCAGGGCCCGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AVTEPGSKTRSGTFLCSTCTSGL*QGPGPS
Trigger: GGAGGGACCCGGGCCCTGCCAGAGCCCAGATGTGCA...TGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCCTTCTTTACTGTCTaGAGCCGCCCTCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASFFTV*SRPRSL
Trigger: GAGGGAGCGAGGGCGGCTTCAGACAGTAAAGAAGGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGTAGCGAAGCTGTCTaGAGAGCTGGCGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGSEAV*RAGGTA
Trigger: AGCTGTTCCGCCAGCTCTTCAGACAGCTTCGCTACC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGATTCCCCTTAGGCTaGGCTGCCTGCATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGFPLG*AACMFR
Trigger: CCTGAACATGCAGGCAGCTCAGCCTAAGGGGAATCC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTGCCTGCTCTTCTGTTaGAAAGATTCTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRCLLFC*KDSLSP
Trigger: TGGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGTGCAGACGGTAGGCTaGCAGGCGTCGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAVQTVG*QASESF
Trigger: AAAGCTTTCCGACGCCTGTCAGCCTACCGTCTGCAC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGCCTCTCTCGAGTATaGAATCTCTTGTGGCTAATG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGLSRV*NLLWLM
Trigger: CATTAGCCACAAGAGATTTCATACTCGAGAGAGGCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTGTGGAAGGAGACCTaGATAGGGGAGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALWKET*IGEPQA
Trigger: AGCCTGCGGCTCCCCTATTCAGGTCTCCTTCCACAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCACACGCCAAGCGCTTaGGCCCAGCATCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPHTPSA*AQHPAL
Trigger: GAGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRARLTA*EAFHPF
Trigger: AAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGCTGCCTTTTCTCCTaGGAGCAGCAGGCACATGCA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGCLFS*EQQAHA
Trigger: TGCATGTGCCTGCTGCTCTCAGGAGAAAAGGCAGCC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCTGGTCTCAATCTCCTaGCCTCATAATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLVSIS*PHNPPA
Trigger: GGCGGGCGGATTATGAGGTCAGGAGATTGAGACCAG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCTGGTCTCAATCTCCTaGTCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLVSIS*SRDLPA
Trigger: GGCGGGCAGATCACGAGATCAGGAGATTGAGACCAG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTTGGAAGGCAGCACTaGCGCCCCACTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPFGRQH*RPTEER
Trigger: CCTTTCCTCAGTGGGGCGTCAGTGCTGCCTTCCAAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATTTCCTGCACTGGCTaGAGTCAAAGAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRISCTG*SQRVSP
Trigger: GGGAGAAACTCTTTGACTGCAGCCAGTGCAGGAAAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCTCTTTGGAGTGACTaGTCTGAGGAACCTGGAACA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPLWSD*SEEPGT
Trigger: TGTTCCAGGTTCCTCAGAGCAGTCACTCCAAAGAGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCCTTCATTTTCACCTaGTCATGGCAATCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRAFIFT*SWQSRA
Trigger: TGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACCAACAGGAGACTTCTaGCCCGCCCCCACCATCCTG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGPTGDF*PAPTIL
Trigger: CAGGATGGTGGGGGCGGGGCAGAAGTCTCCTGTTGG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCGGAGATCGCGCCACTaGACTCTAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPRRSRH*TLAWVT
Trigger: TGTTACCCAGGCTAGAGTGCAGTGGCGCGATCTCCG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACCAGGAGGCAGAGCTTaGAGTGAGCGGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGPGGRA*SERRSR
Trigger: GCGCGATCTCCGCTCACTGCAAGCTCTGCCTCCTGG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAAGATGAGACCTGGTaGTCAGGGCAATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQDETW*SGQSET
Trigger: AGTTTCTGATTGCCCTGAGCACCAGGTCTCATCTTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACTTGACCTCGTGATCTaGCCGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALDLVI*PPQPPK
Trigger: TTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAAG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTTACCATATGGTCCCTaGCTCCTCAGGATTCCATCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLPYGP*LLRIPS
Trigger: TGATGGAATCCTGAGGAGGCAGGGACCATATGGTAA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCAGCCTGGGCAGCCCTaGGGGGCCCCACACTTAGAA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARQPGQP*GAPHLE
Trigger: TTCTAAGTGTGGGGCCCCGCAGGGCTGCCCAGGCTG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGACTGGGCCTGAGCTaGATAGGCAGCATGCCACCT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPRLGLS*IGSMPP
Trigger: AGGTGGCATGCTGCCTATCCAGCTCAGGCCCAGTCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGTCAGGGACCTGGTTaGTGTTACCTGGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLACQGPG*CYLVSR
Trigger: CCGGGAGACCAGGTAACACCAACCAGGTCCCTGACA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCATGCCGCGCACAGTTaGAACTCCACCGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPHAAHS*NSTGRL
Trigger: AAGCCTTCCGGTGGAGTTCCAACTGTGCGCGGCATG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGCAGGCCTGTGGGATaGGGATGGCAACAGGGTACT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLACRPVG*GWQQGT
Trigger: AGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTGCAGGCCTGTGGGATaGGGATGGCAACAGGGTACT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPCRPVG*GWQQGT
Trigger: AGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAAGGCACACCATGCCTaGAACCCAGATCTGATGACT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPKAHHA*NPDLMT
Trigger: AGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTTACAAGGTATCCTGTaGCAAAGGGAGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLQGIL*QREQRW
Trigger: CCATCTCTGCTCCCTTTGCCACAGGATACCTTGTAA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTCGGGAGGCTCAGATaGGACCTGAGCCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLGRLR*DLSLGG
Trigger: ACCTCCCAGGCTCAGGTCCCATCTGAGCCTCCCGAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGGAACCAAGAGAGGTaGGGCCACGGGTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARNQER*GHGFRG
Trigger: GCCTCTAAACCCGTGGCCCCACCTCTCTTGGTTCCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGGAACCAAGAGAGGTaGGGCCACGGGTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPRNQER*GHGFRG
Trigger: GCCTCTAAACCCGTGGCCCCACCTCTCTTGGTTCCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGGAACCAAGAGAGGTaGGGCCACGGGTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPRNQER*GHGFRG
Trigger: GCCTCTAAACCCGTGGCCCCACCTCTCTTGGTTCCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGTTCAAGACCAGCTTaGGCAACATGGCCAAACCTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSSRPA*ATWPNL
Trigger: AAGGTTTGGCCATGTTGCCCAAGCTGGTCTTGAACT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCTCAGCCTCCCAAGCTaGGATTACAGTGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLSLPS*DYSESI
Trigger: TATGGACTCACTGTAATCCCAGCTTGGGAGGCTGAG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGTGAGCCACCGTGCCTaGCCTAAGCCTCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPVSHRA*PKPHCS
Trigger: AGAACAGTGAGGCTTAGGCCAGGCACGGTGGCTCAC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp ACCTGTAGTCCCAACAGGCTGAGGAAGCAGCTTCACTaGTACCCAGGAGGTGCAGGTTGCAGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TCSPNRLRKQLH*YPGGAGCSEPR
Trigger: TCTTGGCTCACTGCAACCTGCACCTCCTGGGTACAAGTGAAGCTGCTTCCTCAGCCTGTTGGGACTACAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGCTGCTCCTGAGAGGTaGAGCAAGGGACCATATCTG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPAAPER*SKGPYL
Trigger: CAGATATGGTCCCTTGCTTCACCTCTCAGGAGCAGC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCTGCTCCTGAGAGGTaGAGCAAGGGACCATATCTG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPAAPER*SKGPYL
Trigger: CAGATATGGTCCCTTGCTTCACCTCTCAGGAGCAGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCTGCTCCTGAGAGGTaGAGCAAGGGACCATATCTG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAAAPER*SKGPYL
Trigger: CAGATATGGTCCCTTGCTTCACCTCTCAGGAGCAGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGAGCAGAGCTGCTCCTaGGAGGTGAAGCAAGGGACC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPEQSCS*EVKQGT
Trigger: GGTCCCTTGCTTCACCTCTCAGGAGCAGCTCTGCTC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGAGCAGAGCTGCTCCTaGGAGGTGAAGCAAGGGACC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGEQSCS*EVKQGT
Trigger: GGTCCCTTGCTTCACCTCTCAGGAGCAGCTCTGCTC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCTCAACTTTGTGTCCTaGGAGGAAGACCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLNFVS*EEDRAG
Trigger: GCCTGCACGGTCTTCCTCTCAGGACACAAAGTTGAG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTCTCTAGCAGGGGACTaGGAACCCACCCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPSLAGD*EPTPTV
Trigger: GACAGTGGGGGTGGGTTCTCAGTCCCCTGCTAGAGA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPSALL*FTLSTT
Trigger: TGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCCCCCACCATCCTGTaGCACCACCACACAATATCA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAAPTIL*HHHTIS
Trigger: TGATATTGTGTGGTGGTGTCACAGGATGGTGGGGGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAGSDGT*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTGGGGCAGACCACACTaGACAGGTGACAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPWGRPH*TGDRKT
Trigger: GGTCTTTCTGTCACCTGTTCAGTGTGGTCTGCCCCA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGGAAATGGAAGCCTTaGAAGATTAGGTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRKWKP*KIRWLT
Trigger: AGTGAGCCACCTAATCTTTCAAGGCTTCCATTTCCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCTCAGGTCTTCAGGTaGTTGGATGAAGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPQVFR*LDEAHP
Trigger: TGGGTGGGCTTCATCCAATCACCTGAAGACCTGAGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACAAGACTGGGCCTGAGCTaGTGGCAGCATGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: AVTEPGSKTRSGTFLCSTRLGLS*WQHATC
Trigger: GCAGGTGGCATGCTGCCATCAGCTCAGGCCCAGTCT...TGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGGCAGCATGCCACCTaGCTGGAGGCATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGRQHAT*LEASLL
Trigger: CAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCTGTACCCATCCAATaGACATCTGGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPVPIQ*TSGLWA
Trigger: TGCCCAGAGCCCAGATGTGCATTGGATGGGTACAGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCTGTACCCATCCAATaGACATCTGGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPVPIQ*TSGLWA
Trigger: TGCCCAGAGCCCAGATGTGCATTGGATGGGTACAGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCCCTTAGGCTGAGCTaGCTGCATGTTCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPLRLS*LHVQAP
Trigger: TGGGGCCTGAACATGCAGGCAGCTCAGCCTAAGGGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACCCCTTAGGCTGAGCTaGCTGCATGTTCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGPLRLS*LHVQAP
Trigger: TGGGGCCTGAACATGCAGGCAGCTCAGCCTAAGGGG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTGAGAGGAAGACCGTaGAGGCGGGCTACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLRGRP*RRATFS
Trigger: GCTGAACGTAGCCCGCCTGCACGGTCTTCCTCTCAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCCATGAACAGCTGCTaGCGTAGGAAGGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAAMNSC*RRKARG
Trigger: TCCTCTTGCCTTCCTACGGCAGCAGCTGTTCATGGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCTCAAGATCAATCCTaGCAAGAAAAGGCACACCAT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRAQDQS*QEKAHH
Trigger: ATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCAGGAGGCAGAGCTTaGAGTGAGCGGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPGGRA*SERRSR
Trigger: GCGCGATCTCCGCTCACTGCAAGCTCTGCCTCCTGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCAGGAGGCAGAGCTTaGAGTGAGCGGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARPGGRA*SERRSR
Trigger: GCGCGATCTCCGCTCACTGCAAGCTCTGCCTCCTGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCCTGGCTTCCAGAGTaGTTGGTCTGGCTATGGAGA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPWLPE*LVWLWR
Trigger: TCTCCATAGCCAGACCAAGCACTCTGGAAGCCAGGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGGCTTTCAAAAATGTaGCAGCTTTCTGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGLSKM*QLSECE
Trigger: CTCACACTCAGAAAGCTGGCACATTTTTGAAAGCCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGCAGAATGGTGACTTaGACACATCGTTCCAATACA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGRMVT*THRSNT
Trigger: TGTATTGGAACGATGTGTGCAAGTCACCATTCTGCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGAGGTCACTTTCATTaGCATCTTGGTTTTGACCGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRGHFH*HLGFDR
Trigger: CCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCATCGTGCCAGGCCTaGCATGGCGTTTGTAAACTG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPSCQA*HGVCKL
Trigger: CAGTTTACAAACGCCATGGCAGGCCTGGCACGATGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACCATCTTGGCTCACTaGAACCTCCAACTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATILAH*NLQLPG
Trigger: TCCCGGGAGTTGGAGGTTGCAGTGAGCCAAGATGGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACCATCTTGGCTCACTaGAACCTCCAACTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTILAH*NLQLPG
Trigger: TCCCGGGAGTTGGAGGTTGCAGTGAGCCAAGATGGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTCCCGTGACTTAGAATaGCTTAACCGTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSRDLE*LNRLGM
Trigger: CATTCCCAGACGGTTAAGGCATTCTAAGTCACGGGA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCAGGAGGTGCAGGTTaGAGTGAGCCAAGATTGCCT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPGGAG*SEPRLP
Trigger: AGGCAATCTTGGCTCACTGCAACCTGCACCTCCTGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTGTCCAGGCTGGAGTaGAGTGGCACTATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALSRLE*SGTISA
Trigger: AGCCGAGATAGTGCCACTGCACTCCAGCCTGGACAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGCATGCCACCTGCCTaGAGGCATCACTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASMPPA*RHHSCS
Trigger: TGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGGCGGAACAGCTCCTaGCCAGGGCGGTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAWRNSS*PGRLRV
Trigger: GACTCTCAACCGCCCTGGCCAGGAGCTGTTCCGCCA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCATGGCGGAACAGCTCCTaGCCAGGGCGGTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAWRNSS*PGRLRV
Trigger: GACTCTCAACCGCCCTGGCCAGGAGCTGTTCCGCCA...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLVGVT*SPGHPS
Trigger: AGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLVGVT*SPGHPS
Trigger: AGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAAAGTCATGGTCTCCTaGAGCTGGGCTGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPKVMVS*SWAVRD
Trigger: GTCCCTGACAGCCCAGCTCCAGGAGACCATGACTTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACACCCCCACTCGTCCTaGGAGAAGGTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGHPHSS*EKVTST
Trigger: TGTGGAGGTGACCTTCTCCCAGGACGAGTGGGGGTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCATGTTCAGGCCCCATaGCTCCCTTGCTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPHVQAP*LPCFQP
Trigger: TGGTTGGAAGCAAGGGAGCCATGGGGCCTGAACATG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAATTTCTTCTTAGCATaGGTTTCTCGGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRNFFLA*VSRCRR
Trigger: CCGTCTGCACCGAGAAACCCATGCTAAGAAGAAATT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGTGAGCCTGGAGCTCTaGCTGCAAGCTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMVSLEL*LQASLQ
Trigger: CTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCAC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCTGTGGGATGGGGATaGCAACAGGGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPVGWG*QQGTGR
Trigger: TCTACCAGTACCCTGTTGCCATCCCCATCCCACAGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGGCTTCCAGAGTGCTTaGTCTGGCTATGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMGFQSA*SGYGDG
Trigger: CCCATCTCCATAGCCAGACCAAGCACTCTGGAAGCC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGCTTCCAGAGTGCTTaGTCTGGCTATGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGFQSA*SGYGDG
Trigger: CCCATCTCCATAGCCAGACCAAGCACTCTGGAAGCC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTCCATCAGGCAGGACTaGCTTCACAGGCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPSIRQD*LHRQAA
Trigger: GGCTGCCTGCCTGTGAAGCCAGTCCTGCCTGATGGA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCAGTGAGAGCCCAGTaGCACCTGCTGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARPVRAQ*HLLWSR
Trigger: CCTGCTCCACAGCAGGTGCCACTGGGCTCTCACTGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp GACGCAAAGAGGAAGTGGCTGGGCTTTCTTATCAGCTaGTCCAGATCCAGGCAAACTGAGGGGGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: DAKRKWLGFLIS*SRSRQTEGESL
Trigger: CAAGCTCTCCCCCTCAGTTTGCCTGGATCTGGACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTGCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 72 bp CAACTGGGCCTGTACACATGCCCAAGAGGTGGCCTTTaGACATCAGAGGGCCAAAAACTCCACCCTCAGATC +
Preference number: 4 (lower is better)
Translates to: QLGLYTCPRGGL*TSEGQKLHPQI
Trigger: GATCTGAGGGTGGAGTTTTTGGCCCTCTGATGTCAAAAGGCCACCTCTTGGGCATGTGTACAGGCCCAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGAGCAGAGCTGCTCCTaGGAGGTGAAGCAAGGGACC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAEQSCS*EVKQGT
Trigger: GGTCCCTTGCTTCACCTCTCAGGAGCAGCTCTGCTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGATTCCCCTTAGGCTaGGCTGCCTGCATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGFPLG*AACMFR
Trigger: CCTGAACATGCAGGCAGCTCAGCCTAAGGGGAATCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGACACTCCCACTGTGTaGAGACTCTGCCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGDTPTV*RLCPRW
Trigger: CCAACGTGGGCAGAGTCTTCACACAGTGGGAGTGTC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACCCTGAGCTGTAGGTaGGAGCTGCCCTATACTGAT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTLSCR*ELPYTD
Trigger: ATCAGTATAGGGCAGCTCTCACCTACAGCTCAGGGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGAGCACCCTGGGGCTaGCTGCAGTCAGGAGATTGC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGAPWG*LQSGDC
Trigger: GCAATCTCCTGACTGCAGTCAGCCCCAGGGTGCTCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAACGTTTCTCACCAGTaGGGATTTTTGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPNVSHQ*GFLAPH
Trigger: ATGTGGAGCCAAAAATCCTCACTGGTGAGAAACGTT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGTTCGAAGACCACCTaGAGGTCTTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGSKTT*RSFHTC
Trigger: GCAAGTGTGGAAAGACCTTCAGGTGGTCTTCGAACC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGTTCGAAGACCACCTaGAGGTCTTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGSKTT*RSFHTC
Trigger: GCAAGTGTGGAAAGACCTTCAGGTGGTCTTCGAACC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCACACGCCAAGCGCTTaGGCCCAGCATCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWHTPSA*AQHPAL
Trigger: GAGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACATCTTCAGTGCCATaGACAGCTGCTGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTSSVP*TAAAVG
Trigger: TCCTACGGCAGCAGCTGTTCATGGCACTGAAGATGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCAGTTTTGGGACAGTaGAGGGACATCTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPVLGQ*RDIFSA
Trigger: GGCACTGAAGATGTCCCTTCACTGTCCCAAAACTGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGCTGCAGTAAGCTGTaGTCCTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGCSKL*SCHCTP
Trigger: TGGAGTGCAGTGGCAGGATCACAGCTTACTGCAGCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGGCTCAGATGGGACCTaGGCCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLGSDGT*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCTCAGGTCCCATCTGAGCC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGGAAATGGAAGCCTTaGAAGATTAGGTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPRKWKP*KIRWLT
Trigger: AGTGAGCCACCTAATCTTTCAAGGCTTCCATTTCCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTGGTCTCAATCTCCTaGCCTCATAATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLVSIS*PHNPPA
Trigger: GGCGGGCGGATTATGAGGTCAGGAGATTGAGACCAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGCAATTACCAGAACTaGGGGTTCCTCTCCTTTTTA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSNYQN*GFLSFL
Trigger: TAAAAAGGAGAGGAACCCTCAGTTCTGGTAATTGCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCTCAAAGTCTCATTGTaGCCCTCCCTTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMLKVSL*PSLLLP
Trigger: AGGGAGCAGAAGGGAGGGTCACAATGAGACTTTGAG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGATCTCTTGACCTCGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGADLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACGAGGTCAAGAGATC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGCTGGGCGGCAGAGTTaGGGCAGCCTTGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIAGRQS*GSLEIG
Trigger: CCCTATCTCAAGGCTGCCTCAACTCTGCCGCCCAGC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTATGGCTGCTGAGGACTaGGAACTAGAGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPMAAED*ELELRL
Trigger: GAGTCTCAGCTCTAGTTCTCAGTCCTCAGCAGCCAT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCATGGCTGCTGAGGACTaGGAACTAGAGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPMAAED*ELELRL
Trigger: GAGTCTCAGCTCTAGTTCTCAGTCCTCAGCAGCCAT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTTTCATCTTTCCTGCTaGGACAGGAGATTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPFHLSC*DRRLRM
Trigger: CATCCTCAATCTCCTGTCTCAGCAGGAAAGATGAAA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACAGAACAACCCAAGAAGGCAAGACTGGGCCTGAGCTaGTGGCAGCATGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SKTRSGTFLCSTEQPKKARLGLS*WQHATC
Trigger: GCAGGTGGCATGCTGCCATCAGCTCAGGCCCAGTCT...TGCCTTCTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCTCAGCAGTCAACAATaGCAACATTTGCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLSSQQ*QHLLGH
Trigger: ATGTCCCAGCAAATGTTGGCATTGTTGACTGCTGAG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGGCAGCATGCCACCTaGCTGGAGGCATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARQHAT*LEASLL
Trigger: CAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAAGGGACCATATCTGTaGAGATCGCAGGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPKGPYL*RSQGSC
Trigger: ACAGGAGCCCTGCGATCTGCACAGATATGGTCCCTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAGGGACCATATCTGTaGAGATCGCAGGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKGPYL*RSQGSC
Trigger: ACAGGAGCCCTGCGATCTGCACAGATATGGTCCCTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGCCCCATGGCTCCCTTaGTTCCAACCAGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPAPWLP*FQPGDQ
Trigger: CTGATCTCCTGGTTGGAAGCAAGGGAGCCATGGGGC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCCCTTAGGCTGAGCTaGCTGCATGTTCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPLRLS*LHVQAP
Trigger: TGGGGCCTGAACATGCAGGCAGCTCAGCCTAAGGGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGAGGAATGAGTGATTaGGGAAGGCCTTGCCACACT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGGMSD*GRPCHT
Trigger: AGTGTGGCAAGGCCTTCCGCAATCACTCATTCCTCC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGAGGAATGAGTGATTaGGGAAGGCCTTGCCACACT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGGMSD*GRPCHT
Trigger: AGTGTGGCAAGGCCTTCCGCAATCACTCATTCCTCC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCTACGTTCAGCCTGTaGTGCTCTGGTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAATFSL*CSGVFP
Trigger: AGGAAACACACCAGAGCAGCACAGGCTGAACGTAGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTGAGAGGAAGACCGTaGAGGCGGGCTACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALRGRP*RRATFS
Trigger: GCTGAACGTAGCCCGCCTGCACGGTCTTCCTCTCAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGCTGCAAGCTTCTTTaGAGTCTTCGAGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGCKLL*SLRGAS
Trigger: AGATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGCTGCAAGCTTCTTTaGAGTCTTCGAGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGCKLL*SLRGAS
Trigger: AGATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGCCTGGAGCTCTGGCTaGAAGCTTCTTTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPAWSSG*KLLCSL
Trigger: AAGACTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCAAAGGACATGGTGCTaGACTTCCCCAGCGTCACAT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPQRTWC*TSPASH
Trigger: ATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACAAAGGACATGGTGCTaGACTTCCCCAGCGTCACAT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAQRTWC*TSPASH
Trigger: ATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTGTCCAAAAGCTCCCTaGCTCCCTCTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPCPKAP*LPLSQL
Trigger: GAGCTGGCTCAGAGGGAGGCAGGGAGCTTTTGGACA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGGCAGCAAGGCTAACTaGATGAGAAGCCTTTCACCC +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMGSKAN*MRSLSP
Trigger: GGGTGAAAGGCTTCTCATGCAGTTAGCCTTGCTGCC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGCAGCAAGGCTAACTaGATGAGAAGCCTTTCACCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGSKAN*MRSLSP
Trigger: GGGTGAAAGGCTTCTCATGCAGTTAGCCTTGCTGCC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCAACAGGAGACTTCTaGCCCGCCCCCACCATCCTG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPTGDF*PAPTIL
Trigger: CAGGATGGTGGGGGCGGGGCAGAAGTCTCCTGTTGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGTGCCATGAACAGCTaGTGCCGTAGGAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASAMNS*CRRKAR
Trigger: TCTTGCCTTCCTACGGCAGCAGCTGTTCATGGCACT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAAGGGACATCTTCAGTaGCATGAACAGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAKGHLQ*HEQLLP
Trigger: CGGCAGCAGCTGTTCATGGCACTGAAGATGTCCCTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCGGAGATCGCGCCACTaGACTCTAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPRRSRH*TLAWVT
Trigger: TGTTACCCAGGCTAGAGTGCAGTGGCGCGATCTCCG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCCAGGAGGCAGAGCTTaGAGTGAGCGGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLPGGRA*SERRSR
Trigger: GCGCGATCTCCGCTCACTGCAAGCTCTGCCTCCTGG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTTCTGCTGATGAAATaGAGGCTTTTCCCAATCTTG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLLLMK*RLFPIL
Trigger: CAAGATTGGGAAAAGCCTGCATTTCATCAGCAGAAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGCTTCTTTACCACATaGTGTTTTATTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGFFTT*CFIGKV
Trigger: GACCTTGCCAATAAAACAGCATGTGGTAAAGAAGCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGAGGTCACTTTCATTaGCATCTTGGTTTTGACCGG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPRGHFH*HLGFDR
Trigger: CCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGGCATGAGCCATCGTaGCAGGCCTGCCATGGCGTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARRHEPS*QACHGV
Trigger: AACGCCATGGCAGGCCTGGCACGATGGCTCATGCCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGGCATGAGCCATCGTaGCAGGCCTGCCATGGCGTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARHEPS*QACHGV
Trigger: AACGCCATGGCAGGCCTGGCACGATGGCTCATGCCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGAGTTCTTGGACCTTaGTCAAGAAAAGAATTCGGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRVLGP*SRKEFG
Trigger: CCCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTCCCTTCTGCTCCCTaGCCCAGCATTAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLPSAP*PSISSW
Trigger: CCAGCTACTAATGCTGGGGCAGGGAGCAGAAGGGAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGAATGGCCTCCGCCTaGTATCTTGCTCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPRMASA*YLALLS
Trigger: TGACAGCAGAGCAAGATAGCAGGCGGAGGCCATTCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTCATGGATTCATCCCTaGAGTAGGTTCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSWIHP*SRFIFR
Trigger: CCTGAAAATGAACCTACTGCAGGGATGAATCCATGA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCATGGCAGCATGCCACCTaGCTGGAGGCATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAWQHAT*LEASLL
Trigger: CAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCA...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGACTGGGCCTGAGCTaGATAGGCAGCATGCCACCT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPRLGLS*IGSMPP
Trigger: AGGTGGCATGCTGCCTATCCAGCTCAGGCCCAGTCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCTGGCAGCCTGCACTaGAGTATAGCTTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPGSLH*SIAFIL
Trigger: GAGGATGAAAGCTATACTCCAGTGCAGGCTGCCAGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCTGGCAGCCTGCACTaGAGTATAGCTTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPGSLH*SIAFIL
Trigger: GAGGATGAAAGCTATACTCCAGTGCAGGCTGCCAGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTGGCGGAACAGCTCCTaGCCAGGGCGGTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIWRNSS*PGRLRV
Trigger: GACTCTCAACCGCCCTGGCCAGGAGCTGTTCCGCCA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTGGCGGAACAGCTCCTaGCCAGGGCGGTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLWRNSS*PGRLRV
Trigger: GACTCTCAACCGCCCTGGCCAGGAGCTGTTCCGCCA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCATCCAATGCACATCTaGGCTCTGGGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIHPMHI*ALGRAR
Trigger: CCGGGCCCTGCCCAGAGCCCAGATGTGCATTGGATG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAAAAGGGCAGGCATCTaGGCAGCAGGAGTATCGGAT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPKRAGI*AAGVSD
Trigger: ATCCGATACTCCTGCTGCCCAGATGCCTGCCCTTTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALVGVT*SPGHPS
Trigger: AGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARLVGVT*SPGHPS
Trigger: AGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGGCTGTCAGGGACCTaGTTGGTGTTACCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGLSGT*LVLPGL
Trigger: GAGACCAGGTAACACCAACCAGGTCCCTGACAGCCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGGCTGTCAGGGACCTaGTTGGTGTTACCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGLSGT*LVLPGL
Trigger: GAGACCAGGTAACACCAACCAGGTCCCTGACAGCCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGCAGGTTTGGTGAATaGTCCCACCAGGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSRFGE*SHQGSH
Trigger: ATGGCTTCCCTGGTGGGACCATTCACCAAACCTGCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAATCTAGGATCCCACTaGCCCCTTTCCAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPNLGSH*PLSSSH
Trigger: ATGGCTGCTGGAAAGGGGCCAGTGGGATCCTAGATT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTACCTGCTACCTCCCTaGCTTCCTTCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPYLLPP*LPSRLC
Trigger: GCAAAGACGTGAAGGAAGCCAGGGAGGTAGCAGGTA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCACTGCACTCCACCCTaGGCAACCCTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPHCTPP*ATLSQK
Trigger: TTTTTGAGACAGGGTTGCCCAGGGTGGAGTGCAGTG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGTTCCCTATTCAAGATaGAGTCACTCTGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRVPYSR*SHSGSN
Trigger: GTTTGAACCAGAGTGACTCCATCTTGAATAGGGAAC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGAATGCCTAACCTCCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPECLTS*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGAATGCCTAACCTCCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPECLTS*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGACCTCCAAGACACCTTaGCATTTTCTTCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRTSKTP*HFLLAF
Trigger: AAAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCACCAGATGGGTAACTaGGCAGCCAAGGGGATAATC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPHQMGN*AAKGII
Trigger: GATTATCCCCTTGGCTGCCCAGTTACCCATCTGGTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCAGGGACCAAGTTCTaGCTTCTGCCCTTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASGTKF*LLPLEE
Trigger: CTCCTCTAAGGGCAGAAGCCAGAACTTGGTCCCTGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCAGTGGCACCTGCTGTaGAGCAGGATTAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMQWHLL*SRISRW
Trigger: CCATCTACTAATCCTGCTCCACAGCAGGTGCCACTG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTaGGCTGCACTGTCCATGGCAGTCACCACACCAATT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPA*AALSMAVTTPI
Trigger: AATTGGTGTGGTGACTGCCATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGGCGGAGGCTGCAGTaGGCCGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIRRRLQ*AEIMPL
Trigger: CAATGGCATGATCTCGGCTCACTGCAGCCTCCGCCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGGCGGAGGCTGCAGTaGGCCGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWRRRLQ*AEIMPL
Trigger: CAATGGCATGATCTCGGCTCACTGCAGCCTCCGCCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTCCTTCTTTACTGTCTaGAGCCGCCCTCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARSFFTV*SRPRSL
Trigger: GAGGGAGCGAGGGCGGCTTCAGACAGTAAAGAAGGA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATCCTTCTTTACTGTCTaGAGCCGCCCTCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASFFTV*SRPRSL
Trigger: GAGGGAGCGAGGGCGGCTTCAGACAGTAAAGAAGGA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGGTAGCGAAGCTGTCTaGAGAGCTGGCGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARGSEAV*RAGGTA
Trigger: AGCTGTTCCGCCAGCTCTTCAGACAGCTTCGCTACC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCAGGTAGCGAAGCTGTCTaGAGAGCTGGCGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAGSEAV*RAGGTA
Trigger: AGCTGTTCCGCCAGCTCTTCAGACAGCTTCGCTACC...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGTAGTCATAGTGGTGTaGACTCATTCTGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRVVIVV*THSEVF
Trigger: AAACACTTCAGAATGAGTTCACACCACTATGACTAC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTCTCTGATGTAGGCTaGAGCCCCCAATCATGTGTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPFSDVG*SPQSCV
Trigger: GACACATGATTGGGGGCTTCAGCCTACATCAGAGAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGACACTCCCACTGTGTaGAGACTCTGCCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGADTPTV*RLCPRW
Trigger: CCAACGTGGGCAGAGTCTTCACACAGTGGGAGTGTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGACACTCCCACTGTGTaGAGACTCTGCCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARDTPTV*RLCPRW
Trigger: CCAACGTGGGCAGAGTCTTCACACAGTGGGAGTGTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGTGCAGACGGTAGGCTaGCAGGCGTCGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAVQTVG*QASESF
Trigger: AAAGCTTTCCGACGCCTGTCAGCCTACCGTCTGCAC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATGATGATCAAACCCTaGGCTGTAGGTGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMMMIKP*AVGESC
Trigger: GCAGCTCTCACCTACAGCTCAGGGTTTGATCATCAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCATGATGATCAAACCCTaGGCTGTAGGTGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPMMIKP*AVGESC
Trigger: GCAGCTCTCACCTACAGCTCAGGGTTTGATCATCAT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATGAACAATAAAGGCTaGCCTATAGGCAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRMNNKG*PIGKVL
Trigger: AAGGACTTTGCCTATAGGTCAGCCTTTATTGTTCAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGCATGCTTCTTCTTATaGACAATAAAGGCTGACCTA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRACFFL*TIKADL
Trigger: TAGGTCAGCCTTTATTGTTCATAAGAAGAAGCATGC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAATGGATGAGGAGGAATaGGTGATTGCGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAMDEEE*VIAEGL
Trigger: AAGGCCTTCCGCAATCACTCATTCCTCCTCATCCAT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGGTATGTCTCCCAATaGACTCTTTCCCACACCACT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGYVSQ*TLSHTT
Trigger: AGTGGTGTGGGAAAGAGTTCATTGGGAGACATACCC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGTGTGTTTCCTCTGGTaGCTGGAAAGGGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPVCFLW*LERVCL
Trigger: GAGACATACCCTTTCCAGTCACCAGAGGAAACACAC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTCAACTTTGTGTCCTaGGAGGAAGACCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLNFVS*EEDRAG
Trigger: GCCTGCACGGTCTTCCTCTCAGGACACAAAGTTGAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAGCAGCCATAGCCCATaGTGCCACAGATATTCTGTC +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMSSHSP*CHRYSV
Trigger: GACAGAATATCTGTGGCATCATGGGCTATGGCTGCT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGGCTGCCTTTTCTCCTaGGAGCAGCAGGCACATGCA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARGCLFS*EQQAHA
Trigger: TGCATGTGCCTGCTGCTCTCAGGAGAAAAGGCAGCC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGCCCCCACCATCCTGTaGCACCACCACACAATATCA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGAPTIL*HHHTIS
Trigger: TGATATTGTGTGGTGGTGTCACAGGATGGTGGGGGC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGCCCCCACCATCCTGTaGCACCACCACACAATATCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPAPTIL*HHHTIS
Trigger: TGATATTGTGTGGTGGTGTCACAGGATGGTGGGGGC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGGAAGCTGCACCTCTaGGAGGGCCCTGGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWWKLHL*EGPGPR
Trigger: TCTAGGACCAGGGCCCTCTCAGAGGTGCAGCTTCCA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTGAGCCCAGGAGTTTaGGACCAGCATGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLSPGV*DQHEQH
Trigger: ATGTTGCTCATGCTGGTCTCAAACTCCTGGGCTCAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCAGGCCTTGAAGAATaGAGAGCTGAACTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASGLEE*RAELAE
Trigger: CTCTGCCAGTTCAGCTCTTCATTCTTCAAGGCCTGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCACCACACTGAACAGGTaGCAGAAAGACCTTCAAATA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPTTLNR*QKDLQI
Trigger: TATTTGAAGGTCTTTCTGTCACCTGTTCAGTGTGGT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCACTCATAAAGCAGTGTaGATTATCGTTGTTCCACGC +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPTHKAV*IIVVPR
Trigger: GCGTGGAACAACGATAATTCACACTGCTTTATGAGT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGGAAGGCAGAATGGTaGCTTGCACACATCGTTCCA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPRKAEW*LAHIVP
Trigger: TGGAACGATGTGTGCAAGTCACCATTCTGCCTTCCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCAAAGAAAACACAACTaGAGGCCCCATGTACCCTCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPQRKHN*RPHVPS
Trigger: GGAGGGTACATGGGGCCTTCAGTTGTGTTTTCTTTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTGGTCTCAATCTCCTaGCCTCATAATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARLVSIS*PHNPPA
Trigger: GGCGGGCGGATTATGAGGTCAGGAGATTGAGACCAG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTTGAACTTCCCCTCTaGCGCAAAGAGGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPFELPL*RKEEVA
Trigger: AGCCACTTCCTCTTTGCGTCAGAGGGGAAGTTCAAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGGGTTTGCACAGTTTaGACTTCCCCTCTGACGCAA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARVCTV*TSPLTQ
Trigger: TTGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGGGTTTGCACAGTTTaGACTTCCCCTCTGACGCAA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPRVCTV*TSPLTQ
Trigger: TTGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCACAGGGCCCCTCCCTaGGCACAGACACTATGTCAG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLHRAPP*AQTLCQ
Trigger: CTGACATAGTGTCTGTGCTCAGGGAGGGGCCCTGTG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGATCTCTTGACCTCGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIDLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACGAGGTCAAGAGATC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTGCACATATGTCATATaGACCCCAATTATGACTGCA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRCTYVI*TPIMTA
Trigger: TGCAGTCATAATTGGGGTTCATATGACATATGTGCA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAATTCTGAATGGTCTTaGACATCATGCACTGCACCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPNSEWS*TSCTAP
Trigger: AGGTGCAGTGCATGATGTTCAAGACCATTCAGAATT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCTTCAGGTGATTGGATaGAGCCCACCCACAGATAGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLQVIG*SPPTDR
Trigger: TCTATCTGTGGGTGGGCTTCATCCAATCACCTGAAG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCTCTTTGGAGTGACTaGTCTGAGGAACCTGGAACA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPLWSD*SEEPGT
Trigger: TGTTCCAGGTTCCTCAGAGCAGTCACTCCAAAGAGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCTCTTTGGAGTGACTaGTCTGAGGAACCTGGAACA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPLWSD*SEEPGT
Trigger: TGTTCCAGGTTCCTCAGAGCAGTCACTCCAAAGAGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTTTTCCCACATATGCTaGATTTGTGGCACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRFSHIC*ICGTFS
Trigger: GGAAAAAGTGCCACAAATGCAGCATATGTGGGAAAA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTCCAAAGGACATGGTaGTGCACTTCCCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLQRTW*CTSPAS
Trigger: TGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTCCAAAGGACATGGTaGTGCACTTCCCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLQRTW*CTSPAS
Trigger: TGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCAGATGGACCGCTGCTaGCTATGCAGGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIQMDRC*LCRPVG
Trigger: TCCCACAGGCCTGCATAGGCAGCAGCGGTCCATCTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGTCCAAAAGCTCCCTaGCTCCCTCTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARCPKAP*LPLSQL
Trigger: GAGCTGGCTCAGAGGGAGGCAGGGAGCTTTTGGACA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGCCATGAACAGCTGCTaGCGTAGGAAGGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPAMNSC*RRKARG
Trigger: TCCTCTTGCCTTCCTACGGCAGCAGCTGTTCATGGC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCGGAGATCGCGCCACTaGACTCTAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARRRSRH*TLAWVT
Trigger: TGTTACCCAGGCTAGAGTGCAGTGGCGCGATCTCCG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATCCATCAGGTCTCCTaGCTTAGGAAGGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMIHQVS*LRKAEW
Trigger: CCATTCTGCCTTCCTAAGGCAGGAGACCTGATGGAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCATCGTGCCAGGCCTaGCATGGCGTTTGTAAACTG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPSCQA*HGVCKL
Trigger: CAGTTTACAAACGCCATGGCAGGCCTGGCACGATGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGGCATGAGCCATCGTaGCAGGCCTGCCATGGCGTT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRHEPS*QACHGV
Trigger: AACGCCATGGCAGGCCTGGCACGATGGCTCATGCCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAATAGCCATTTGTATTaGTCCTGTTACCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRNSHLY*SCYQKA
Trigger: CGCTTTCTGGTAACAGGAGCAATACAAATGGCTATT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTTGACCTCGTGATCTaGCCGCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALDLVI*PPQPPK
Trigger: TTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGACCATTCAGGATCCTaGTTTGGCTGCACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPDHSGS*FGCTVH
Trigger: ATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGCATGCCACCTGCCTaGAGGCATCACTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPSMPPA*RHHSCS
Trigger: TGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACATGTCAGGGACCTGGTTaGTGTTACCTGGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AVTEPGSKTRSGTFLCSTCQGPG*CYLVSR
Trigger: CCGGGAGACCAGGTAACACCAACCAGGTCCCTGACA...TGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGTCAGGGACCTGGTTaGTGTTACCTGGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGACQGPG*CYLVSR
Trigger: CCGGGAGACCAGGTAACACCAACCAGGTCCCTGACA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGGGCTGTCAGGGACCTaGTTGGTGTTACCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARGLSGT*LVLPGL
Trigger: GAGACCAGGTAACACCAACCAGGTCCCTGACAGCCC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGATGGTCTCCTGGAGCTaGGCTGTCAGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARMVSWS*AVRDLV
Trigger: AACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCAT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAATGGTCTCCTGGAGCTaGGCTGTCAGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAMVSWS*AVRDLV
Trigger: AACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCAT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCAATGGTCTCCTGGAGCTaGGCTGTCAGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAMVSWS*AVRDLV
Trigger: AACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCAT...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAAAGTCATGGTCTCCTaGAGCTGGGCTGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPKVMVS*SWAVRD
Trigger: GTCCCTGACAGCCCAGCTCCAGGAGACCATGACTTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCATGCCGCGCACAGTTaGAACTCCACCGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARHAAHS*NSTGRL
Trigger: AAGCCTTCCGGTGGAGTTCCAACTGTGCGCGGCATG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCACATATGACTTACAGTaGAAGGATTTCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPTYDLQ*KDFLHW
Trigger: CCAGTGCAGGAAATCCTTCCACTGTAAGTCATATGT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGTCCTGACTAAAAGATaGCCCGCCCTCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMVLTKR*PALRFS
Trigger: AGAAAACCTGAGGGCGGGCCATCTTTTAGTCAGGAC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGTCCTGACTAAAAGATaGCCCGCCCTCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPVLTKR*PALRFS
Trigger: AGAAAACCTGAGGGCGGGCCATCTTTTAGTCAGGAC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGTGAGCCTGGAGCTCTaGCTGCAAGCTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGVSLEL*LQASLQ
Trigger: CTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCAC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGAGCTTTCAAATCCTTaGGATTCTGTCACTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPELSNP*DSVTSF
Trigger: GAAGCTAGTGACAGAATCCCAAGGATTTGAAAGCTC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGATTTTCATCTGTTCTaGTCCCTGCTGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMDFHLF*SLLGLW
Trigger: CCAGAGACCCAGCAGGGACCAGAACAGATGAAAATC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAAGGCACACCATGCCTaGAACCCAGATCTGATGACT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPKAHHA*NPDLMT
Trigger: AGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAAATAACCCAGGCGTaGTGGCAGGCACTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKITQA*WQALVV
Trigger: GACTACAAGTGCCTGCCACCACGCCTGGGTTATTTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGCTTCCAGAGTGCTTaGTCTGGCTATGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGFQSA*SGYGDG
Trigger: CCCATCTCCATAGCCAGACCAAGCACTCTGGAAGCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCAGGTGTGTGTTTGTaGGTGGCTTCCAGTCAACAT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPAGVCL*VASSQH
Trigger: ATGTTGACTGGAAGCCACCCACAAACACACACCTGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTCCTTTGTAGGGACATaGATGAAGGTGGAAATAATC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSFVGT*MKVEII
Trigger: GATTATTTCCACCTTCATCCATGTCCCTACAAAGGA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTCTGTCGCCCAGGCTaGAGTGCAGTTGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARLCRPG*SAVVRS
Trigger: AGATCGCACAACTGCACTCCAGCCTGGGCGACAGAG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTTCTCATCACCGTCTTaGTTTTGGTGGGTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPFSSPS*FWWVLA
Trigger: AGCTAAAACCCACCAAAACCAAGACGGTGATGAGAA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTGTCATGGCACTGGTaGGAGGGTAGCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLSWHW*EGSSED
Trigger: ATCCTCACTGCTACCCTCCCACCAGTGCCATGACAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAACTGTAAACTGTCATaGCACTGGTGGGAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPNCKLS*HWWEGS
Trigger: GCTACCCTCCCACCAGTGCCATGACAGTTTACAGTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTTCAGAACTAGAGGCTaGTTATCCCAGAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRFRTRG*LSQKSL
Trigger: TAGACTTTTCTGGGATAACCAGCCTCTAGTTCTGAA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGGTCTTCAGGTGATTaGATGAAGCCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARSSGD*MKPTHR
Trigger: TCTGTGGGTGGGCTTCATCCAATCACCTGAAGACCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTGCACATCTGGGCTCTaGCAGGGCCCGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYCTSGL*QGPGPS
Trigger: GGAGGGACCCGGGCCCTGCCAGAGCCCAGATGTGCA...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTCATCAGCAAGTGACTaGAATTACCAGCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSSASD*NYQHFC
Trigger: ACAGAAATGCTGGTAATTTCAGTCACTTGCTGATGA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGTGTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCGGTAGCGAAGCTGTCTaGAGAGCTGGCGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: GVSYHTQPPLIFTIIQNGGSEAV*RAGGTA
Trigger: AGCTGTTCCGCCAGCTCTTCAGACAGCTTCGCTACC...GCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCAGCTGCTCCTGAGAGGTaGAGCAAGGGACCATATCTG +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAAAPER*SKGPYL
Trigger: CAGATATGGTCCCTTGCTTCACCTCTCAGGAGCAGC...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTGCCTGCTCTTCTGTTaGAAAGATTCTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPCLLFC*KDSLSP
Trigger: TGGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGTCACTGCACTTAAATaGCACTCCCACTGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAVTALK*HSHCVK
Trigger: CTTCACACAGTGGGAGTGTCATTTAAGTGCAGTGAC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGTGCAGACGGTAGGCTaGCAGGCGTCGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIVQTVG*QASESF
Trigger: AAAGCTTTCCGACGCCTGTCAGCCTACCGTCTGCAC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGAGCTGCCCTATACTaGTTCAATTCAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRAALY*FNSRNF
Trigger: GAAATTTCTTGAATTGAATCAGTATAGGGCAGCTCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGGAACACTGTGTCCTaGCTAAAAGATGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARWNTVS*LKDGPP
Trigger: GGGCGGGCCATCTTTTAGTCAGGACACAGTGTTCCA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGGAACACTGTGTCCTaGCTAAAAGATGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAWNTVS*LKDGPP
Trigger: GGGCGGGCCATCTTTTAGTCAGGACACAGTGTTCCA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGAACTCTCTGATGGATaGGGAGGAATGAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPELSDG*GGMSDC
Trigger: GCAATCACTCATTCCTCCTCATCCATCAGAGAGTTC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTCAACTTTGTGTCCTaGGAGGAAGACCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALNFVS*EEDRAG
Trigger: GCCTGCACGGTCTTCCTCTCAGGACACAAAGTTGAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPSALL*FTLSTT
Trigger: TGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPARLTA*EAFHPF
Trigger: AAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGCGTTTATATCTGCTaGGGCCGAGGATCCTATAGA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSVYIC*GRGSYR
Trigger: TCTATAGGATCCTCGGCCTCAGCAGATATAAACGCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGCGTTTATATCTGCTaGGGCCGAGGATCCTATAGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSVYIC*GRGSYR
Trigger: TCTATAGGATCCTCGGCCTCAGCAGATATAAACGCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGCTGCAGTAAGCTGTaGTCCTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWGCSKL*SCHCTP
Trigger: TGGAGTGCAGTGGCAGGATCACAGCTTACTGCAGCC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGGTTGGAAGGAAACTaGATGTTCTCCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGLEGN*MFSRPG
Trigger: TCCTGGCCTGGAGAACATTCAGTTTCCTTCCAACCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGGGGCAGACCACACTaGACAGGTGACAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAWGRPH*TGDRKT
Trigger: GGTCTTTCTGTCACCTGTTCAGTGTGGTCTGCCCCA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGGGGCAGACCACACTaGACAGGTGACAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARWGRPH*TGDRKT
Trigger: GGTCTTTCTGTCACCTGTTCAGTGTGGTCTGCCCCA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTGAGGGGGAGAGCTTaGATGCTATTAGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLRGRA*MLLADK
Trigger: TTTGTCTGCTAATAGCATTCAAGCTCTCCCCCTCAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACTGAGGGGGAGAGCTTaGATGCTATTAGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALRGRA*MLLADK
Trigger: TTTGTCTGCTAATAGCATTCAAGCTCTCCCCCTCAG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCTGAGGGGGAGAGCTTaGATGCTATTAGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLRGRA*MLLADK
Trigger: TTTGTCTGCTAATAGCATTCAAGCTCTCCCCCTCAG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAGTGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKWRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAACCTCCACTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCTGGTCTCAATCTCCTaGTCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWLVSIS*SRDLPA
Trigger: GGCGGGCAGATCACGAGATCAGGAGATTGAGACCAG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTGGTTCAAATACCTCTaGCACTTTTACCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPWFKYL*HFYPAP
Trigger: AGGGGCTGGGTAAAAGTGTCAGAGGTATTTGAACCA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCAATTGTGTTTTTGGTaGCTAAGTGTTACCATATGG +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRQLCFW*LSVTIW
Trigger: CCATATGGTAACACTTAGTCACCAAAAACACAATTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGACTTGGAATTGACTaGGTGATTGTAACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPRLGID*VIVTLC
Trigger: ACACAGAGTTACAATCACTCAGTCAATTCCAAGTCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATCAAGACTTGGAATTaGCTGAGTGATTGTAACTCT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRIKTWN*LSDCNS
Trigger: AGAGTTACAATCACTCAGTCAATTCCAAGTCTTGAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAGCCAAAAAGCCCATTaGTCACCTGACCTCCATACA +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMSQKAH*SPDLHT
Trigger: TGTATGGAGGTCAGGTGATCAATGGGCTTTTTGGCT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTCGTTTGCTCAGCACTaGAACCACATGTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSFAQH*NHMWKQ
Trigger: CTGTTTCCACATGTGGTTTCAGTGCTGAGCAAACGA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCGTTTGCTCAGCACTaGAACCACATGTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASFAQH*NHMWKQ
Trigger: CTGTTTCCACATGTGGTTTCAGTGCTGAGCAAACGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCACTGGACAGCCTTGTaGATAATTCTTCTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPHWTAL*IILLSF
Trigger: AAAAGAGAGAAGAATTATTCACAAGGCTGTCCAGTG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTTTGGAAGGCAGCACTaGCGCCCCACTGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLFGRQH*RPTEER
Trigger: CCTTTCCTCAGTGGGGCGTCAGTGCTGCCTTCCAAA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGGACAGACAACTCAATaGAGTCTCAGAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPGQTTQ*SLREPF
Trigger: GAATGGCTCTCTGAGACTTCATTGAGTTGTCTGTCC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCTCAGGTCTTCAGGTaGTTGGATGAAGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARPQVFR*LDEAHP
Trigger: TGGGTGGGCTTCATCCAATCACCTGAAGACCTGAGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAATCTTCAGGGTGGATaGGCAGGCTGGAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARNLQGG*AGWRTR
Trigger: CCTGGTTCTCCAGCCTGCTCATCCACCCTGAAGATT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAATTGCACTCCAGCCTTaGGAAAGAGCGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGIALQP*ERARLH
Trigger: GTGGAGTCTCGCTCTTTCGCAAGGCTGGAGTGCAAT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACCGAGATCATGCCATTaGACTCCAGCCTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGPRSCH*TPALRK
Trigger: CTTTCGCAAGGCTGGAGTGCAATGGCATGATCTCGG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGCCAGGAAGTCACGTaGTTCTATTTCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSQEVT*FYFIGR
Trigger: CCTCCCTATGAAATAGAAGCACGTGACTTCCTGGCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGCAGGAGTATCGGATTaGCCAGCCAGGAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARAGVSD*PARKSR
Trigger: ACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGCAGGAGTATCGGATTaGCCAGCCAGGAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAAGVSD*PARKSR
Trigger: ACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATTGATCCTTCTGCCTaGTCTTCTGTTGAAAAGATT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRIDPSA*SSVEKI
Trigger: AATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTATTTCCTGCACTGGCTaGAGTCAAAGAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPISCTG*SQRVSP
Trigger: GGGAGAAACTCTTTGACTGCAGCCAGTGCAGGAAAT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGTGGAAGGATTTCCTaGACTGGCTGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASGRIS*TGCSQR
Trigger: TCTTTGACTGCAGCCAGTGCAGGAAATCCTTCCACT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGTGGAAGGATTTCCTaGACTGGCTGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSGRIS*TGCSQR
Trigger: TCTTTGACTGCAGCCAGTGCAGGAAATCCTTCCACT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGCTACGTTCAGCCTGTaGTGCTCTGGTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGATFSL*CSGVFP
Trigger: AGGAAACACACCAGAGCAGCACAGGCTGAACGTAGC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGACCCAATCTCCTCTaGCTGCAACTCTCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPRPNLL*LQLSLE
Trigger: CTCTAGGGAGAGTTGCAGGCAGAGGAGATTGGGTCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCCTTCATTTTCACCTaGTCATGGCAATCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPAFIFT*SWQSRA
Trigger: TGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCAAGATGAGACCTGGTaGTCAGGGCAATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPQDETW*SGQSET
Trigger: AGTTTCTGATTGCCCTGAGCACCAGGTCTCATCTTG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCAAGATGAGACCTGGTaGTCAGGGCAATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPQDETW*SGQSET
Trigger: AGTTTCTGATTGCCCTGAGCACCAGGTCTCATCTTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCCAAGGGCTGCTGGTTaGCTATTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPPRAAG*LFLWLF
Trigger: AAATAACCATAAAAATAGGCAACCAGCAGCCCTTGG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCTCCCTTCTGCTCCCTaGCCCAGCATTAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLPSAP*PSISSW
Trigger: CCAGCTACTAATGCTGGGGCAGGGAGCAGAAGGGAG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTCCCGTGACTTAGAATaGCTTAACCGTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSRDLE*LNRLGM
Trigger: CATTCCCAGACGGTTAAGGCATTCTAAGTCACGGGA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTCGCCTGCCCCGCTTaGTTTTGGTTGCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPFACPA*FWLLAL
Trigger: AAGAGCAAGCAACCAAAAGCAAGCGGGGCAGGCGAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGAGCCCAGTGGCACCTaGTGTGGAGCAGGATTAGTA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAAREPSGT*CGAGLV
Trigger: TACTAATCCTGCTCCACAGCAGGTGCCACTGGGCTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGCATGCCACCTGCCTaGAGGCATCACTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASMPPA*RHHSCS
Trigger: TGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATGGCGGAACAGCTCCTaGCCAGGGCGGTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPHPATFNLYNNPEWQALWRNSS*PGRLRV
Trigger: GACTCTCAACCGCCCTGGCCAGGAGCTGTTCCGCCA...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTAGGATCTGTGCCTTaGAGAGAACGTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLGSVP*RERQAS
Trigger: TGAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTAGGATCTGTGCCTTaGAGAGAACGTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLGSVP*RERQAS
Trigger: TGAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGTCAGGGACCTGGTTaGTGTTACCTGGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWCQGPG*CYLVSR
Trigger: CCGGGAGACCAGGTAACACCAACCAGGTCCCTGACA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACAGAACAACCCAAGAAGGCAGGGCTGTCAGGGACCTaGTTGGTGTTACCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SKTRSGTFLCSTEQPKKAGLSGT*LVLPGL
Trigger: GAGACCAGGTAACACCAACCAGGTCCCTGACAGCCC...TGCCTTCTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGGCTGTCAGGGACCTaGTTGGTGTTACCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWGLSGT*LVLPGL
Trigger: GAGACCAGGTAACACCAACCAGGTCCCTGACAGCCC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGATGGTCTCCTGGAGCTaGGCTGTCAGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: VSYHTQPPLIFTIIQNGRMVSWS*AVRDLV
Trigger: AACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCAT...CCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAAAGTCATGGTCTCCTaGAGCTGGGCTGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARKVMVS*SWAVRD
Trigger: GTCCCTGACAGCCCAGCTCCAGGAGACCATGACTTT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACAAAAGTCATGGTCTCCTaGAGCTGGGCTGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AVTEPGSKTRSGTFLCSTKVMVS*SWAVRD
Trigger: GTCCCTGACAGCCCAGCTCCAGGAGACCATGACTTT...TGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACATGTTCAGGCCCCATaGCTCCCTTGCTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAHVQAP*LPCFQP
Trigger: TGGTTGGAAGCAAGGGAGCCATGGGGCCTGAACATG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGTTTCCTCTGGTGACTaGAAAGGGTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPVSSGD*KGYVSQ
Trigger: TTGGGAGACATACCCTTTCCAGTCACCAGAGGAAAC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAACCACAAAGGGCAGTaGTCTCTCTCTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLANHKGQ*SLSSEL
Trigger: CAACTCTGAAGAGAGAGACCACTGCCCTTTGTGGTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAACCACAAAGGGCAGTaGTCTCTCTCTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPNHKGQ*SLSSEL
Trigger: CAACTCTGAAGAGAGAGACCACTGCCCTTTGTGGTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGCAGGCCTGTGGGATaGGGATGGCAACAGGGTACT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWCRPVG*GWQQGT
Trigger: AGTACCCTGTTGCCATCCCCATCCCACAGGCCTGCA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATACCTGCTACCTCCCTaGCTTCCTTCACGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGYLLPP*LPSRLC
Trigger: GCAAAGACGTGAAGGAAGCCAGGGAGGTAGCAGGTA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAAAGGGACTTTTCCATaGTTACAACACCAACTGACA +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPKGTFP*LQHQLT
Trigger: TGTCAGTTGGTGTTGTAACCATGGAAAAGTCCCTTT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCAAAGGGAGCAGAGATaGGGGGAAAGGGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPQREQR*GERGAK
Trigger: TTTAGCACCCCTTTCCCCCCATCTCTGCTCCCTTTG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTACAAGGTATCCTGTaGCAAAGGGAGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALQGIL*QREQRW
Trigger: CCATCTCTGCTCCCTTTGCCACAGGATACCTTGTAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGATCGAGACCATCCTaGAGATCGAGACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPRSRPS*RSRPSW
Trigger: CCAGGATGGTCTCGATCTCCAGGATGGTCTCGATCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATGCAAGATGAGACCTaGTGCTCAGGGCAATCAGAA +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMMQDET*CSGQSE
Trigger: TTCTGATTGCCCTGAGCACCAGGTCTCATCTTGCAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCATGCAAGATGAGACCTaGTGCTCAGGGCAATCAGAA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPMQDET*CSGQSE
Trigger: TTCTGATTGCCCTGAGCACCAGGTCTCATCTTGCAT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCACATGCTGTTTTATTaGCAAGGTCTTTATGACTGT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRHMLFY*QGLYDC
Trigger: ACAGTCATAAAGACCTTGCCAATAAAACAGCATGTG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAAACTGTCATGGCACTaGTGGGAGTGTCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAKLSWH*WECLLA
Trigger: TGCTAACAGACACTCCCACCAGTGCCATGACAGTTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAACTGTCATGGCACTaGTGGGAGTGTCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKLSWH*WECLLA
Trigger: TGCTAACAGACACTCCCACCAGTGCCATGACAGTTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAAAAGGTGTGGTAGCTaGCATACAAGTATTTACTCT +
Preference number: 4 (lower is better)
Translates to: GSKGHGAALPQRHILAGRKRCGS*HTSIYS
Trigger: AGAGTAAATACTTGTATGCCAGCTACCACACCTTTT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGTTCAAGACCAGCTTaGGCAACATGGCCAAACCTT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSSRPA*ATWPNL
Trigger: AAGGTTTGGCCATGTTGCCCAAGCTGGTCTTGAACT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCAGGCAATGATAGACTaGATTAAGAAAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPQAMID*IKKMWH
Trigger: GTGCCACATTTTCTTAATCCAGTCTATCATTGCCTG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTCACCGTCTTGGTTTTaGTGGGTTTTAGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSPSWF*WVLAGF
Trigger: GAAGCCAGCTAAAACCCACCAAAACCAAGACGGTGA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAAACTGTCATGGCACTaGTGGGAGGGTAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPKLSWH*WEGSSE
Trigger: CTCACTGCTACCCTCCCACCAGTGCCATGACAGTTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp CAAAAGGTTCCCAATCCAGACCCCAAGAGAGGGTTCTaGGATCTCGCACAAGAAAGAATTCAGGGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: QKVPNPDPKRGF*DLAQERIQGES
Trigger: GGACTCGCCCTGAATTCTTTCTTGTGCGAGATCCAAGAACCCTCTCTTGGGGTCTGGATTGGGAACCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGCTGCTCCTGAGAGGTaGAGCAAGGGACCATATCTG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIAAPER*SKGPYL
Trigger: CAGATATGGTCCCTTGCTTCACCTCTCAGGAGCAGC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCCCAATCATGTGTCTaGGCCCCTTCCCATATTTCT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPQSCV*APSHIS
Trigger: AGAAATATGGGAAGGGGCTCAGACACATGATTGGGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTCTCTGATGTAGGCTaGAGCCCCCAATCATGTGTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPFSDVG*SPQSCV
Trigger: GACACATGATTGGGGGCTTCAGCCTACATCAGAGAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACCCTGAGCTGTAGGTaGGAGCTGCCCTATACTGAT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATLSCR*ELPYTD
Trigger: ATCAGTATAGGGCAGCTCTCACCTACAGCTCAGGGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGAGCACCCTGGGGCTaGCTGCAGTCAGGAGATTGC +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGAPWG*LQSGDC
Trigger: GCAATCTCCTGACTGCAGTCAGCCCCAGGGTGCTCC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAATGGATGAGGAGGAATaGGTGATTGCGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGMDEEE*VIAEGL
Trigger: AAGGCCTTCCGCAATCACTCATTCCTCCTCATCCAT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAACGTTTCTCACCAGTaGGGATTTTTGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLANVSHQ*GFLAPH
Trigger: ATGTGGAGCCAAAAATCCTCACTGGTGAGAAACGTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGGTATGTCTCCCAATaGACTCTTTCCCACACCACT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGYVSQ*TLSHTT
Trigger: AGTGGTGTGGGAAAGAGTTCATTGGGAGACATACCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGTGTGTTTCCTCTGGTaGCTGGAAAGGGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGVCFLW*LERVCL
Trigger: GAGACATACCCTTTCCAGTCACCAGAGGAAACACAC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGGTTCGAAGACCACCTaGAGGTCTTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAGSKTT*RSFHTC
Trigger: GCAAGTGTGGAAAGACCTTCAGGTGGTCTTCGAACC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCTTTCACCCTTTTACTaGGTCCTTGGATCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLSPFY*VLGSVV
Trigger: AACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACTTTCACCCTTTTACTaGGTCCTTGGATCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALSPFY*VLGSVV
Trigger: AACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCC +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMDAEVH*LAQDQS
Trigger: GGATTGATCTTGAGCAAGTCAATGAACCTCTGCATC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPDAEVH*LAQDQS
Trigger: GGATTGATCTTGAGCAAGTCAATGAACCTCTGCATC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPDAEVH*LAQDQS
Trigger: GGATTGATCTTGAGCAAGTCAATGAACCTCTGCATC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTCAGGCCTTGAAGAATaGAGAGCTGAACTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPSGLEE*RAELAE
Trigger: CTCTGCCAGTTCAGCTCTTCATTCTTCAAGGCCTGA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTCAGAAACTGTCAACTaGAGCCAAACAGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSETVN*SQTAQN
Trigger: GTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTGA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTCAGAAACTGTCAACTaGAGCCAAACAGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSETVN*SQTAQN
Trigger: GTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTGA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGGGGCAGACCACACTaGACAGGTGACAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWWGRPH*TGDRKT
Trigger: GGTCTTTCTGTCACCTGTTCAGTGTGGTCTGCCCCA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGGAAATGGAAGCCTTaGAAGATTAGGTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARKWKP*KIRWLT
Trigger: AGTGAGCCACCTAATCTTTCAAGGCTTCCATTTCCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAGGAAATGGAAGCCTTaGAAGATTAGGTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMRKWKP*KIRWLT
Trigger: AGTGAGCCACCTAATCTTTCAAGGCTTCCATTTCCT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCCAATTTTTGCAGGTaGGGAAATGGAAGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPNFCR*GNGSLE
Trigger: TTCAAGGCTTCCATTTCCTCACCTGCAAAAATTGGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTATAGGGTAACTTCCTaGTGTTGCCATGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMYRVTS*CCHGNC
Trigger: ACAGTTGCCATGGCAACATCAGGAAGTTACCCTATA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACCATGGTGGCATTTTaGGTCTCCTGTAATTACTGC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATMVAF*VSCNYC
Trigger: GCAGTAATTACAGGAGACTCAAAATGCCACCATGGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTTCATCTTTCCTGCTaGGACAGGAGATTGAGGATG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPFHLSC*DRRLRM
Trigger: CATCCTCAATCTCCTGTCTCAGCAGGAAAGATGAAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTTCAGGTGATTGGATaGAGCCCACCCACAGATAGA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLQVIG*SPPTDR
Trigger: TCTATCTGTGGGTGGGCTTCATCCAATCACCTGAAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGAATTCTCTCTTGCCTaGGAGAGAGTCTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLEFSLA*ERVWGS
Trigger: GCTGCCCCAGACTCTCTCTCAGGCAAGAGAGAATTC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACTCAGCAGTCAACAATaGCAACATTTGCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALSSQQ*QHLLGH
Trigger: ATGTCCCAGCAAATGTTGGCATTGTTGACTGCTGAG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAGGGACCATATCTGTaGAGATCGCAGGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKGPYL*RSQGSC
Trigger: ACAGGAGCCCTGCGATCTGCACAGATATGGTCCCTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGCAGGAGTATCGGATTaGCCAGCCAGGAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIAGVSD*PARKSR
Trigger: ACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGCAGGAGTATCGGATTaGCCAGCCAGGAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWAGVSD*PARKSR
Trigger: ACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCTGTAGGTGAGAGCTaGCCTATACTGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAAVGES*PILIQF
Trigger: GAATTGAATCAGTATAGGGCAGCTCTCACCTACAGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGCTGTAGGTGAGAGCTaGCCTATACTGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMAVGES*PILIQF
Trigger: GAATTGAATCAGTATAGGGCAGCTCTCACCTACAGC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTGCAGTCAGGAGATTaGCTGAAGCCTTCACGACAT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLQSGD*LKPSRH
Trigger: ATGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCTCTTTGGAGTGACTaGTCTGAGGAACCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPLWSD*SEEPGT
Trigger: TGTTCCAGGTTCCTCAGAGCAGTCACTCCAAAGAGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGACGTTCAGCCTGTGCTaGTCTGGTGTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARTFSLC*SGVFPL
Trigger: CAGAGGAAACACACCAGAGCAGCACAGGCTGAACGT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACGTTCAGCCTGTGCTaGTCTGGTGTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATFSLC*SGVFPL
Trigger: CAGAGGAAACACACCAGAGCAGCACAGGCTGAACGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGCTACGTTCAGCCTGTaGTGCTCTGGTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAATFSL*CSGVFP
Trigger: AGGAAACACACCAGAGCAGCACAGGCTGAACGTAGC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGCCTGGAGCTCTGGCTaGAAGCTTCTTTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARAWSSG*KLLCSL
Trigger: AAGACTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCTCCAAAGGACATGGTaGTGCACTTCCCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWLQRTW*CTSPAS
Trigger: TGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTATCCAGCACTCCCTCTaGTCTTCTCTGATTCACTTT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPIQHSL*SSLIHF
Trigger: AAAGTGAATCAGAGAAGAGCAGAGGGAGTGCTGGAT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCATCCAGCACTCCCTCTaGTCTTCTCTGATTCACTTT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPIQHSL*SSLIHF
Trigger: AAAGTGAATCAGAGAAGAGCAGAGGGAGTGCTGGAT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGACCCAATCTCCTCTaGCTGCAACTCTCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARRPNLL*LQLSLE
Trigger: CTCTAGGGAGAGTTGCAGGCAGAGGAGATTGGGTCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAAGGGACATCTTCAGTaGCATGAACAGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARKGHLQ*HEQLLP
Trigger: CGGCAGCAGCTGTTCATGGCACTGAAGATGTCCCTT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAGGGACATCTTCAGTaGCATGAACAGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKGHLQ*HEQLLP
Trigger: CGGCAGCAGCTGTTCATGGCACTGAAGATGTCCCTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGCTCAAGATCAATCCTaGCAAGAAAAGGCACACCAT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPAQDQS*QEKAHH
Trigger: ATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCCTGGCTTCCAGAGTaGTTGGTCTGGCTATGGAGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPWLPE*LVWLWR
Trigger: TCTCCATAGCCAGACCAAGCACTCTGGAAGCCAGGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTGCTGGGTGGTTAAGTaGACACAACCTTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPCWVVK*TQPSKI
Trigger: AATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGCAGAATGGTGACTTaGACACATCGTTCCAATACA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGRMVT*THRSNT
Trigger: TGTATTGGAACGATGTGTGCAAGTCACCATTCTGCC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCATCGTGCCAGGCCTaGCATGGCGTTTGTAAACTG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPSCQA*HGVCKL
Trigger: CAGTTTACAAACGCCATGGCAGGCCTGGCACGATGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCACCATCTTGGCTCACTaGAACCTCCAACTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAITILAH*NLQLPG
Trigger: TCCCGGGAGTTGGAGGTTGCAGTGAGCCAAGATGGT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGACCATCTTGGCTCACTaGAACCTCCAACTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWTILAH*NLQLPG
Trigger: TCCCGGGAGTTGGAGGTTGCAGTGAGCCAAGATGGT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGACCATTCAGGATCCTaGTTTGGCTGCACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGDHSGS*FGCTVH
Trigger: ATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCTGGGCCTGTACACATaGCCAAGAGGTGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILGLYT*PRGGLL
Trigger: CAAAAGGCCACCTCTTGGGCATGTGTACAGGCCCAG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCTGGGCCTGTACACATaGCCAAGAGGTGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWLGLYT*PRGGLL
Trigger: CAAAAGGCCACCTCTTGGGCATGTGTACAGGCCCAG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGAATGGCCTCCGCCTaGTATCTTGCTCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARMASA*YLALLS
Trigger: TGACAGCAGAGCAAGATAGCAGGCGGAGGCCATTCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGAAGAATTCTCTCTTaGCTGAGAGAGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGRILS*LRESLG
Trigger: CCCCAGACTCTCTCTCAGGCAAGAGAGAATTCTTCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATGGCAGCATGCCACCTaGCTGGAGGCATCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LPHPATFNLYNNPEWQALWQHAT*LEASLL
Trigger: CAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCA...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp GGTGTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCCCTGTACCCATCCAATaGACATCTGGGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVSYHTQPPLIFTIIQNGPVPIQ*TSGLWQ
Trigger: CTGCCAGAGCCCAGATGTGCATTGGATGGGTACAGG...GCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp GTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGAGCATGCCACCTGCCTaGAGGCATCACTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VSYHTQPPLIFTIIQNGRSMPPA*RHHSCS
Trigger: TGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCT...CCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACCTGGCAGCCTGCACTaGAGTATAGCTTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAPGSLH*SIAFIL
Trigger: GAGGATGAAAGCTATACTCCAGTGCAGGCTGCCAGG...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp GCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACACTAGGATCTGTGCCTTaGAGAGAACGTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AVTEPGSKTRSGTFLCSTLGSVP*RERQAS
Trigger: TGAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAG...TGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAAAAGGGCAGGCATCTaGGCAGCAGGAGTATCGGAT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARKRAGI*AAGVSD
Trigger: ATCCGATACTCCTGCTGCCCAGATGCCTGCCCTTTT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGAAAGTCATGGTCTCCTaGAGCTGGGCTGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VSYHTQPPLIFTIIQNGRKVMVS*SWAVRD
Trigger: GTCCCTGACAGCCCAGCTCCAGGAGACCATGACTTT...CCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTACACCCCCACTCGTCCTaGGAGAAGGTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: LPHPATFNLYNNPEWQALHPHSS*EKVTST
Trigger: TGTGGAGGTGACCTTCTCCCAGGACGAGTGGGGGTG...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCATGTTCAGGCCCCATaGCTCCCTTGCTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIHVQAP*LPCFQP
Trigger: TGGTTGGAAGCAAGGGAGCCATGGGGCCTGAACATG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCATGTTCAGGCCCCATaGCTCCCTTGCTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLHVQAP*LPCFQP
Trigger: TGGTTGGAAGCAAGGGAGCCATGGGGCCTGAACATG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGTAGGAGCAGCAACTaGATTCCCCTTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARCRSSN*IPLRLS
Trigger: GCTCAGCCTAAGGGGAATCCAGTTGCTGCTCCTACA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAATTTCTTCTTAGCATaGGTTTCTCGGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPNFFLA*VSRCRR
Trigger: CCGTCTGCACCGAGAAACCCATGCTAAGAAGAAATT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAGGATTTCCTGCACTaGCTGCAGTCAAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKDFLH*LQSKSF
Trigger: GAAACTCTTTGACTGCAGCCAGTGCAGGAAATCCTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGTCCTGACTAAAAGATaGCCCGCCCTCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPVLTKR*PALRFS
Trigger: AGAAAACCTGAGGGCGGGCCATCTTTTAGTCAGGAC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATGTAGGGCTCCTCTTTaGAGTGACTGCTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGCRAPL*SDCSEE
Trigger: TTCCTCAGAGCAGTCACTCCAAAGAGGAGCCCTACA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTTTTGGCTCCACATTTaGAGTCTTTTCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPFWLHI*SLFTFM
Trigger: CATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGTGAGCCTGGAGCTCTaGCTGCAAGCTTCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIVSLEL*LQASLQ
Trigger: CTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCAC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAATCTAGGATCCCACTaGCCCCTTTCCAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARNLGSH*PLSSSH
Trigger: ATGGCTGCTGGAAAGGGGCCAGTGGGATCCTAGATT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATTTTCACCTGCTCATaGCAATCCAGAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMIFTCS*QSRAGK
Trigger: CTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACAAAGGGAGCAGAGATaGGGGGAAAGGGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAQREQR*GERGAK
Trigger: TTTAGCACCCCTTTCCCCCCATCTCTGCTCCCTTTG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAAAATAACCCAGGCGTaGTGGCAGGCACTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPKITQA*WQALVV
Trigger: GACTACAAGTGCCTGCCACCACGCCTGGGTTATTTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGATCGAGACCATCCTaGAGATCGAGACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARRSRPS*RSRPSW
Trigger: CCAGGATGGTCTCGATCTCCAGGATGGTCTCGATCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCACTTACCCACACTTaGGCTTTCAAAAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAALTHT*AFKNVP
Trigger: TGGCACATTTTTGAAAGCCCAAGTGTGGGTAAGTGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGGGGTTTCACCATATTaGCCAGGCTGGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLGVSPY*PGWLVS
Trigger: TGAGACCAGCCAGCCTGGCCAATATGGTGAAACCCC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGCAACTTCCACCTCCTaGGTTCAAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGATSTS*VQVILL
Trigger: CAGGAGAATCACTTGAACCCAGGAGGTGGAAGTTGC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTGGTGGGTTTTAGCTaGCTTCTTTACTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLALVGFS*LLYCNL
Trigger: CAGGTTGCAGTAAAGAAGCCAGCTAAAACCCACCAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCGTCTTGGTTTTGGTaGGTTTTAGCTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPSWFW*VLAGFF
Trigger: AAAGAAGCCAGCTAAAACCCACCAAAACCAAGACGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGGACCCTCCCTGGGTaGGTGAGCAGGTATTTACAT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARWTLPG*VSRYLH
Trigger: ATGTAAATACCTGCTCACCCACCCAGGGAGGGTCCA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGGCTGCACTGTCCATaGCAGTCACCACACCAATTG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARWLHCP*QSPHQL
Trigger: CAATTGGTGTGGTGACTGCCATGGACAGTGCAGCCA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCTGAGGAACCATGGTaGCATTTTGAGTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASEEPW*HFESPV
Trigger: TACAGGAGACTCAAAATGCCACCATGGTTCCTCAGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCTAAGCCTCATCTTTaGGGAGGTGAATTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASKPHL*GGEFES
Trigger: GCTCTCAAATTCACCTCCCCAAAGATGAGGCTTAGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAGGTTCATTTTCAGGTaGAAGTGTAGGAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMRFIFR*KCRKHR
Trigger: CCTGTGCTTCCTACACTTCCACCTGAAAATGAACCT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTACCTGGGGACCTTGTaGCTCAGCCAAGTTGACACC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWYLGTL*LSQVDT
Trigger: GGTGTCAACTTGGCTGAGCCACAAGGTCCCCAGGTA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGGTCTTCAGGTGATTaGATGAAGCCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGRSSGD*MKPTHR
Trigger: TCTGTGGGTGGGCTTCATCCAATCACCTGAAGACCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp GTCGTGATCCAGTCCCCAAGAGAGAGTTCTTGGACCTaGCTCAAGAAAAGAATTCGGGCGAGTCCACAAAGT +
Preference number: 4 (lower is better)
Translates to: VVIQSPRESSWT*LKKRIRASPQS
Trigger: ACTTTGTGGACTCGCCCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGGGGACTGGATCACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 72 bp AGCTTGTCCAGATCCAGGCAAACTGAGGGGGAGAGCTaGAATGCTATTAGCAGACAAACGTCAAACATGGGG +
Preference number: 4 (lower is better)
Translates to: SLSRSRQTEGES*NAISRQTSNMG
Trigger: CCCCATGTTTGACGTTTGTCTGCTAATAGCATTCAAGCTCTCCCCCTCAGTTTGCCTGGATCTGGACAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 72 bp GCACTGTCCATGGCAGTCACCACACCAATTGTGTTTTaGGTGACTAAGTGTTACCATATGGTCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ALSMAVTTPIVF*VTKCYHMVPAS
Trigger: GGAGGCAGGGACCATATGGTAACACTTAGTCACCAAAAACACAATTGGTGTGGTGACTGCCATGGACAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTGCCTGCTCTTCTGTTaGAAAGATTCTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPCLLFC*KDSLSP
Trigger: TGGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTCCTGTCCTGTGACTaGAATTGGTCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPFLSCD*NWSLLS
Trigger: AGAAAGAAGAGACCAATTTCAGTCACAGGACAGGAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCTTTTCCTGTCCTGTaGCTGAAATTGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASFPVL*LKLVSS
Trigger: AGAAGAGACCAATTTCAGTCACAGGACAGGAAAAGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTCTTTTCCTGTCCTGTaGCTGAAATTGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSFPVL*LKLVSS
Trigger: AGAAGAGACCAATTTCAGTCACAGGACAGGAAAAGA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCCCAATCATGTGTCTaGGCCCCTTCCCATATTTCT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARPQSCV*APSHIS
Trigger: AGAAATATGGGAAGGGGCTCAGACACATGATTGGGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCCCAATCATGTGTCTaGGCCCCTTCCCATATTTCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPQSCV*APSHIS
Trigger: AGAAATATGGGAAGGGGCTCAGACACATGATTGGGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGTCACTGCACTTAAATaGCACTCCCACTGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPVTALK*HSHCVK
Trigger: CTTCACACAGTGGGAGTGTCATTTAAGTGCAGTGAC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGTCACTGCACTTAAATaGCACTCCCACTGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGVTALK*HSHCVK
Trigger: CTTCACACAGTGGGAGTGTCATTTAAGTGCAGTGAC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCACCCTGAGCTGTAGGTaGGAGCTGCCCTATACTGAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAITLSCR*ELPYTD
Trigger: ATCAGTATAGGGCAGCTCTCACCTACAGCTCAGGGT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGATGGATGAGGAGGAATaGGTGATTGCGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARMDEEE*VIAEGL
Trigger: AAGGCCTTCCGCAATCACTCATTCCTCCTCATCCAT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGAACTCTCTGATGGATaGGGAGGAATGAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPELSDG*GGMSDC
Trigger: GCAATCACTCATTCCTCCTCATCCATCAGAGAGTTC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGTGTGTTTCCTCTGGTaGCTGGAAAGGGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAVCFLW*LERVCL
Trigger: GAGACATACCCTTTCCAGTCACCAGAGGAAACACAC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGCCTCTCTCGAGTATaGAATCTCTTGTGGCTAATG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGLSRV*NLLWLM
Trigger: CATTAGCCACAAGAGATTTCATACTCGAGAGAGGCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGGCCTCTCTCGAGTATaGAATCTCTTGTGGCTAATG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPGLSRV*NLLWLM
Trigger: CATTAGCCACAAGAGATTTCATACTCGAGAGAGGCC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGTTCGAAGACCACCTaGAGGTCTTTCCACACTTGC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGSKTT*RSFHTC
Trigger: GCAAGTGTGGAAAGACCTTCAGGTGGTCTTCGAACC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGCAGCCATAGCCCATaGTGCCACAGATATTCTGTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASSHSP*CHRYSV
Trigger: GACAGAATATCTGTGGCATCATGGGCTATGGCTGCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGACATCTTCAGTGCCATaGACAGCTGCTGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWTSSVP*TAAAVG
Trigger: TCCTACGGCAGCAGCTGTTCATGGCACTGAAGATGT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATGGAAGCTGCACCTCTaGGAGGGCCCTGGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPWKLHL*EGPGPR
Trigger: TCTAGGACCAGGGCCCTCTCAGAGGTGCAGCTTCCA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTTGAGCCCAGGAGTTTaGGACCAGCATGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARLSPGV*DQHEQH
Trigger: ATGTTGCTCATGCTGGTCTCAAACTCCTGGGCTCAA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATCAGGCCTTGAAGAATaGAGAGCTGAACTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASGLEE*RAELAE
Trigger: CTCTGCCAGTTCAGCTCTTCATTCTTCAAGGCCTGA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGGTTGGAAGGAAACTaGATGTTCTCCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGLEGN*MFSRPG
Trigger: TCCTGGCCTGGAGAACATTCAGTTTCCTTCCAACCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACCACACTGAACAGGTaGCAGAAAGACCTTCAAATA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTTLNR*QKDLQI
Trigger: TATTTGAAGGTCTTTCTGTCACCTGTTCAGTGTGGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGGAAGGCAGAATGGTaGCTTGCACACATCGTTCCA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARRKAEW*LAHIVP
Trigger: TGGAACGATGTGTGCAAGTCACCATTCTGCCTTCCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGACTGTATCTTGTGCTaGCCTCCTATCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPDCILC*PPISSH
Trigger: ATGGGATGAGATAGGAGGTCAGCACAAGATACAGTC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTGAGGGGGAGAGCTTaGATGCTATTAGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLRGRA*MLLADK
Trigger: TTTGTCTGCTAATAGCATTCAAGCTCTCCCCCTCAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATTTGAACTTCCCCTCTaGCGCAAAGAGGAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAFELPL*RKEEVA
Trigger: AGCCACTTCCTCTTTGCGTCAGAGGGGAAGTTCAAA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGTGGGAATTGAACAATaGGAAAACATGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAVGIEQ*ENMDTG
Trigger: TCCTGTGTCCATGTTTTCTCATTGTTCAATTCCCAC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACAACTCAAAGCAAATaGAGACAGCCATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATTQSK*RQPFSA
Trigger: AGCTGAGAATGGCTGTCTTCATTTGCTTTGAGTTGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGCCAAAAAGCCCATTaGTCACCTGACCTCCATACA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGSQKAH*SPDLHT
Trigger: TGTATGGAGGTCAGGTGATCAATGGGCTTTTTGGCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGTGGGCAGATCACTTaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGGQIT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAAGTGATCTGCCCACC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGGTGGGCAGATCACTTaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLGGQIT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAAGTGATCTGCCCACC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGTGGCTCAGCCAAGTTaGCACCTAAAATTTACCCTC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGVAQPS*HLKFTL
Trigger: GAGGGTAAATTTTAGGTGTCAACTTGGCTGAGCCAC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGTGTGCATGAACTCTaGAGGCAGTCTGCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGVHEL*RQSAEE
Trigger: TTCTTCCGCAGACTGCCTTCAGAGTTCATGCACACC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATCTCGAAGACTGGGCCTaGGCTGATGGCAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHLEDWA*ADGSMP
Trigger: TGGCATGCTGCCATCAGCTCAGGCCCAGTCTTCGAG...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATCCTTCTTTACTGTCTaGAGCGCCCTCGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: LPHPATFNLYNNPEWQALSFFTV*SALAPS
Trigger: CGAGGGAGCGAGGGCGCTTCAGACAGTAAAGAAGGA...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGATTGCACTCCAGCCTTaGGAAAGAGCGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWIALQP*ERARLH
Trigger: GTGGAGTCTCGCTCTTTCGCAAGGCTGGAGTGCAAT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTATTTCCTGCACTGGCTaGAGTCAAAGAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPISCTG*SQRVSP
Trigger: GGGAGAAACTCTTTGACTGCAGCCAGTGCAGGAAAT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCACGTTCAGCCTGTGCTaGTCTGGTGTGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAITFSLC*SGVFPL
Trigger: CAGAGGAAACACACCAGAGCAGCACAGGCTGAACGT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACTGAGAGGAAGACCGTaGAGGCGGGCTACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPLRGRP*RRATFS
Trigger: GCTGAACGTAGCCCGCCTGCACGGTCTTCCTCTCAG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGCCTGGAGCTCTGGCTaGAAGCTTCTTTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLAWSSG*KLLCSL
Trigger: AAGACTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGCCTGGAGCTCTGGCTaGAAGCTTCTTTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIAWSSG*KLLCSL
Trigger: AAGACTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGCACTTTTTCCCAATaGTTATGTCCTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGTFSQ*LCPGVQ
Trigger: CTGGACTCCAGGACATAAGCATTGGGAAAAAGTGCC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCATATGGTTTTTCATATaGCGAGCCAGGTTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPIWFFI*RARFED
Trigger: GTCTTCGAACCTGGCTCGGCATATGAAAAACCATAT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMLPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTTCCTTCACGTCTTTaGTCACATTTCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLPSRL*SHFTFS
Trigger: TGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGCAGCAAGGCTAACTaGATGAGAAGCCTTTCACCC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGSKAN*MRSLSP
Trigger: GGGTGAAAGGCTTCTCATGCAGTTAGCCTTGCTGCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGCCTTCATTTTCACCTaGTCATGGCAATCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPAFIFT*SWQSRA
Trigger: TGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGTGCCATGAACAGCTaGTGCCGTAGGAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISAMNS*CRRKAR
Trigger: TCTTGCCTTCCTACGGCAGCAGCTGTTCATGGCACT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGAGGTTCATTGACTTaGTCAAGATCAATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPRGSLT*SRSILP
Trigger: TGGCAGGATTGATCTTGAGCAAGTCAATGAACCTCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCAGGCCAGGATGAGATaGAAGATGAGACCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIQARMR*KMRPGA
Trigger: AGCACCAGGTCTCATCTTGCATCTCATCCTGGCCTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCAGGCCAGGATGAGATaGAAGATGAGACCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLQARMR*KMRPGA
Trigger: AGCACCAGGTCTCATCTTGCATCTCATCCTGGCCTG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGATCCATCAGGTCTCCTaGCTTAGGAAGGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARIHQVS*LRKAEW
Trigger: CCATTCTGCCTTCCTAAGGCAGGAGACCTGATGGAT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGCTTCTTTACCACATaGTGTTTTATTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGFFTT*CFIGKV
Trigger: GACCTTGCCAATAAAACAGCATGTGGTAAAGAAGCC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGAGTTCTTGGACCTTaGTCAAGAAAAGAATTCGGG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARVLGP*SRKEFG
Trigger: CCCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAGGGCAAGTCCGCAGTaGAAAGCAAAAACAAGTTTA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPRASPQ*KAKTSL
Trigger: TAAACTTGTTTTTGCTTTGCACTGCGGACTTGCCCT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCAAAGGGACCATATCTGTaGAGATCGCAGGCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAKGPYL*RSQAPV
Trigger: TACAGGAGCCTGCGATCTGCACAGATATGGTCCCTT...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAATGCCAACATTTGCTaGGACATCAGAAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMNANIC*DIRSHQ
Trigger: CTGATGACTTCTGATGTCCCAGCAAATGTTGGCATT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAATGCCAACATTTGCTaGGACATCAGAAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPNANIC*DIRSHQ
Trigger: CTGATGACTTCTGATGTCCCAGCAAATGTTGGCATT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATCTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHLVGVT*SPGHPS
Trigger: AGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAG...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTAGGGCTGTCAGGGACCTaGTTGGTGTTACCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPHPATFNLYNNPEWQALGLSGT*LVLPGL
Trigger: GAGACCAGGTAACACCAACCAGGTCCCTGACAGCCC...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATCACCCCCACTCGTCCTaGGAGAAGGTCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHHPHSS*EKVTST
Trigger: TGTGGAGGTGACCTTCTCCCAGGACGAGTGGGGGTG...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGCAGGTTTGGTGAATaGTCCCACCAGGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSRFGE*SHQGSH
Trigger: ATGGCTTCCCTGGTGGGACCATTCACCAAACCTGCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGCAGGTTTGGTGAATaGTCCCACCAGGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISRFGE*SHQGSH
Trigger: ATGGCTTCCCTGGTGGGACCATTCACCAAACCTGCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGTAGGAGCAGCAACTaGATTCCCCTTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWCRSSN*IPLRLS
Trigger: GCTCAGCCTAAGGGGAATCCAGTTGCTGCTCCTACA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACATATGACTTACAGTaGAAGGATTTCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATYDLQ*KDFLHW
Trigger: CCAGTGCAGGAAATCCTTCCACTGTAAGTCATATGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGTCCTGACTAAAAGATaGCCCGCCCTCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAVLTKR*PALRFS
Trigger: AGAAAACCTGAGGGCGGGCCATCTTTTAGTCAGGAC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGTAGGGCTCCTCTTTaGAGTGACTGCTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARCRAPL*SDCSEE
Trigger: TTCCTCAGAGCAGTCACTCCAAAGAGGAGCCCTACA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACCAGTGAGGATTTTTaGCTCCACATTTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTSEDF*LHIWSL
Trigger: AAGACTCCAAATGTGGAGCCAAAAATCCTCACTGGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGAGCTTTCAAATCCTTaGGATTCTGTCACTAGCTTC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPELSNP*DSVTSF
Trigger: GAAGCTAGTGACAGAATCCCAAGGATTTGAAAGCTC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGATTTTCATCTGTTCTaGTCCCTGCTGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGADFHLF*SLLGLW
Trigger: CCAGAGACCCAGCAGGGACCAGAACAGATGAAAATC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCAAAGGGAGCAGAGATaGGGGGAAAGGGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLQREQR*GERGAK
Trigger: TTTAGCACCCCTTTCCCCCCATCTCTGCTCCCTTTG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTACAAGGTATCCTGTaGCAAAGGGAGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLQGIL*QREQRW
Trigger: CCATCTCTGCTCCCTTTGCCACAGGATACCTTGTAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCACTGCACTCCACCCTaGGCAACCCTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWHCTPP*ATLSQK
Trigger: TTTTTGAGACAGGGTTGCCCAGGGTGGAGTGCAGTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAAATAACCCAGGCGTaGTGGCAGGCACTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKITQA*WQALVV
Trigger: GACTACAAGTGCCTGCCACCACGCCTGGGTTATTTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGATCGAGACCATCCTaGAGATCGAGACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIRSRPS*RSRPSW
Trigger: CCAGGATGGTCTCGATCTCCAGGATGGTCTCGATCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGATCGAGACCATCCTaGAGATCGAGACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRSRPS*RSRPSW
Trigger: CCAGGATGGTCTCGATCTCCAGGATGGTCTCGATCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTATGCAAGATGAGACCTaGTGCTCAGGGCAATCAGAA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPMQDET*CSGQSE
Trigger: TTCTGATTGCCCTGAGCACCAGGTCTCATCTTGCAT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGTTCCCTATTCAAGATaGAGTCACTCTGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPVPYSR*SHSGSN
Trigger: GTTTGAACCAGAGTGACTCCATCTTGAATAGGGAAC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGTTCCCTATTCAAGATaGAGTCACTCTGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPVPYSR*SHSGSN
Trigger: GTTTGAACCAGAGTGACTCCATCTTGAATAGGGAAC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAAACTGTCATGGCACTaGTGGGAGTGTCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPKLSWH*WECLLA
Trigger: TGCTAACAGACACTCCCACCAGTGCCATGACAGTTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCAAGAGAGAGTTCTTaGACCTTGCTCAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPRESS*TLLKKR
Trigger: TCTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCAAGAGAGAGTTCTTaGACCTTGCTCAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPRESS*TLLKKR
Trigger: TCTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACCTCCAAGACACCTTaGCATTTTCTTCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTSKTP*HFLLAF
Trigger: AAAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCCCAGCATTAGTAGCTaGGACCTCTCCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLPSISS*DLSTEA
Trigger: TGCTTCTGTGGAGAGGTCCCAGCTACTAATGCTGGG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGCAACTTCCACCTCCTaGGTTCAAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAATSTS*VQVILL
Trigger: CAGGAGAATCACTTGAACCCAGGAGGTGGAAGTTGC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAAACTGTCATGGCACTaGTGGGAGGGTAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLKLSWH*WEGSSE
Trigger: CTCACTGCTACCCTCCCACCAGTGCCATGACAGTTT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAACTGTAAACTGTCATaGCACTGGTGGGAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGANCKLS*HWWEGS
Trigger: GCTACCCTCCCACCAGTGCCATGACAGTTTACAGTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGGACCCTCCCTGGGTaGGTGAGCAGGTATTTACAT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWWTLPG*VSRYLH
Trigger: ATGTAAATACCTGCTCACCCACCCAGGGAGGGTCCA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGAAACATTCACCAGATaGGTAACTGGGCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAETFTR*VTGQPR
Trigger: CCTTGGCTGCCCAGTTACCCATCTGGTGAATGTTTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCCAGGCAGCCCCTTTaGAAAACAGTTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARPRQPL*KTVWHF
Trigger: GAAATGCCAAACTGTTTTCCAAAGGGGCTGCCTGGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATCCATCAGGCAGGACTaGCTTCACAGGCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSIRQD*LHRQAA
Trigger: GGCTGCCTGCCTGTGAAGCCAGTCCTGCCTGATGGA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTTTCCCTCACGCCATaGCAAAAGCATCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALSLTP*QKHLHQ
Trigger: CTGATGGAGATGCTTTTGCCATGGCGTGAGGGAAAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGGTCGCTCTGTCTTCTaGGCACCATTTCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLGRSVF*APFQLT
Trigger: TGTGAGCTGAAATGGTGCCCAGAAGACAGAGCGACC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATAGCAATCTTCCCACCTaGGCCTCCCGAAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYSNLPT*ASRSGG
Trigger: CCCACCACTTCGGGAGGCCCAGGTGGGAAGATTGCT...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPEVISK*LKLPAF
Trigger: AAATGCTGGTAATTTCAGTCACTTGCTGATGACTTC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTGAGCAGAGCTGCTCCTaGGAGGTGAAGCAAGGGACC +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFEQSCS*EVKQGT
Trigger: GGTCCCTTGCTTCACCTCTCAGGAGCAGCTCTGCTC...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGTAGTCATAGTGGTGTaGACTCATTCTGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAVVIVV*THSEVF
Trigger: AAACACTTCAGAATGAGTTCACACCACTATGACTAC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCCCCAATCATGTGTCTaGGCCCCTTCCCATATTTCT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWPQSCV*APSHIS
Trigger: AGAAATATGGGAAGGGGCTCAGACACATGATTGGGG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTCTCTGATGTAGGCTaGAGCCCCCAATCATGTGTC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIFSDVG*SPQSCV
Trigger: GACACATGATTGGGGGCTTCAGCCTACATCAGAGAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGACACTCCCACTGTGTaGAGACTCTGCCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPDTPTV*RLCPRW
Trigger: CCAACGTGGGCAGAGTCTTCACACAGTGGGAGTGTC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGTGCAGACGGTAGGCTaGCAGGCGTCGGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPVQTVG*QASESF
Trigger: AAAGCTTTCCGACGCCTGTCAGCCTACCGTCTGCAC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGATGATGATCAAACCCTaGGCTGTAGGTGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLMMIKP*AVGESC
Trigger: GCAGCTCTCACCTACAGCTCAGGGTTTGATCATCAT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCATGCAACCTCATATaGCGAGTAAAGTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASCNLI*RVKFDL
Trigger: GAGATCAAACTTTACTCGTCATATGAGGTTGCATGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGTCAGGAGATTGCCTaGAGCCTTCACGACATTCAT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASQEIA*SLHDIH
Trigger: ATGAATGTCGTGAAGGCTTCAGGCAATCTCCTGACT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAATGAACAATAAAGGCTaGCCTATAGGCAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAMNNKG*PIGKVL
Trigger: AAGGACTTTGCCTATAGGTCAGCCTTTATTGTTCAT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCATGCTTCTTCTTATaGACAATAAAGGCTGACCTA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAACFFL*TIKADL
Trigger: TAGGTCAGCCTTTATTGTTCATAAGAAGAAGCATGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGCATGCTTCTTCTTATaGACAATAAAGGCTGACCTA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPACFFL*TIKADL
Trigger: TAGGTCAGCCTTTATTGTTCATAAGAAGAAGCATGC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGAACTCTCTGATGGATaGGGAGGAATGAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAELSDG*GGMSDC
Trigger: GCAATCACTCATTCCTCCTCATCCATCAGAGAGTTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGTGTGTTTCCTCTGGTaGCTGGAAAGGGTATGTCTC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIVCFLW*LERVCL
Trigger: GAGACATACCCTTTCCAGTCACCAGAGGAAACACAC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATTGTGGAAGGAGACCTaGATAGGGGAGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPLWKET*IGEPQA
Trigger: AGCCTGCGGCTCCCCTATTCAGGTCTCCTTCCACAA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCCTCTGCTCTTCTCTaGTTCACTTTGTCCACTACA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPSALL*FTLSTT
Trigger: TGTAGTGGACAAAGTGAATCAGAGAAGAGCAGAGGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGCTGCAGTAAGCTGTaGTCCTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGCSKL*SCHCTP
Trigger: TGGAGTGCAGTGGCAGGATCACAGCTTACTGCAGCC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTGAGCCCAGGAGTTTaGGACCAGCATGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILSPGV*DQHEQH
Trigger: ATGTTGCTCATGCTGGTCTCAAACTCCTGGGCTCAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCAGGCCTTGAAGAATaGAGAGCTGAACTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISGLEE*RAELAE
Trigger: CTCTGCCAGTTCAGCTCTTCATTCTTCAAGGCCTGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCAAAGAAAACACAACTaGAGGCCCCATGTACCCTCC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIQRKHN*RPHVPS
Trigger: GGAGGGTACATGGGGCCTTCAGTTGTGTTTTCTTTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCAAAGAAAACACAACTaGAGGCCCCATGTACCCTCC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLQRKHN*RPHVPS
Trigger: GGAGGGTACATGGGGCCTTCAGTTGTGTTTTCTTTG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGACTGTATCTTGTGCTaGCCTCCTATCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGADCILC*PPISSH
Trigger: ATGGGATGAGATAGGAGGTCAGCACAAGATACAGTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCAACTAAAACCTGGCTaGTATAAAATCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPQLKPG*YKISLL
Trigger: CAGCAAGGAGATTTTATATCAGCCAGGTTTTAGTTG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGGGTTTGCACAGTTTaGACTTCCCCTCTGACGCAA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWRVCTV*TSPLTQ
Trigger: TTGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAGAAAGTAAAGTGGTaGAAGGACAGCTACTCCATA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKKVKW*KDSYSI
Trigger: TATGGAGTAGCTGTCCTTTCACCACTTTACTTTCTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAACCCATGTCACAGTaGTTGATTTACTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKPMSQ*LIYCVR
Trigger: TCTCACACAGTAAATCAATCACTGTGACATGGGTTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTGCACATATGTCATATaGACCCCAATTATGACTGCA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPCTYVI*TPIMTA
Trigger: TGCAGTCATAATTGGGGTTCATATGACATATGTGCA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAAGGAGACGGGAAACTaGAGTACCACAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWKETGN*STTGRR
Trigger: TCTCCTTCCTGTGGTACTTCAGTTTCCCGTCTCCTT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAAGGAGACGGGAAACTaGAGTACCACAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIKETGN*STTGRR
Trigger: TCTCCTTCCTGTGGTACTTCAGTTTCCCGTCTCCTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTCTCGAAGACTGGGCCTaGGCTGATGGCAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFLEDWA*ADGSMP
Trigger: TGGCATGCTGCCATCAGCTCAGGCCCAGTCTTCGAG...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCCTTCTTTACTGTCTaGAGCGCCCTCGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYSFFTV*SALAPS
Trigger: CGAGGGAGCGAGGGCGCTTCAGACAGTAAAGAAGGA...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTCAGCAGTCAACAATaGCAACATTTGCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLSSQQ*QHLLGH
Trigger: ATGTCCCAGCAAATGTTGGCATTGTTGACTGCTGAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTAGCAGGAGTATCGGATTaGCCAGCCAGGAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: LPHPATFNLYNNPEWQALAGVSD*PARKSR
Trigger: ACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGC...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGCTGTAGGTGAGAGCTaGCCTATACTGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPAVGES*PILIQF
Trigger: GAATTGAATCAGTATAGGGCAGCTCTCACCTACAGC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAATTTCCTGCACTGGCTaGAGTCAAAGAGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAISCTG*SQRVSP
Trigger: GGGAGAAACTCTTTGACTGCAGCCAGTGCAGGAAAT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGTGGAAGGATTTCCTaGACTGGCTGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASGRIS*TGCSQR
Trigger: TCTTTGACTGCAGCCAGTGCAGGAAATCCTTCCACT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCTGCAGTCAGGAGATTaGCTGAAGCCTTCACGACAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILQSGD*LKPSRH
Trigger: ATGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCTGCAGTCAGGAGATTaGCTGAAGCCTTCACGACAT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLQSGD*LKPSRH
Trigger: ATGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGGCACTTTTTCCCAATaGTTATGTCCTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARGTFSQ*LCPGVQ
Trigger: CTGGACTCCAGGACATAAGCATTGGGAAAAAGTGCC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTTTTCCCACATATGCTaGATTTGTGGCACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMFSHIC*ICGTFS
Trigger: GGAAAAAGTGCCACAAATGCAGCATATGTGGGAAAA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTGATTCTTGCTTTTTaGTTCAACACAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLILAF*FNTSGW
Trigger: CCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGCTCAAGATCAATCCTaGCAAGAAAAGGCACACCAT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPAQDQS*QEKAHH
Trigger: ATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACAAGATGAGACCTGGTaGTCAGGGCAATCAGAAACT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAQDETW*SGQSET
Trigger: AGTTTCTGATTGCCCTGAGCACCAGGTCTCATCTTG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATGCTGGGTGGTTAAGTaGACACAACCTTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGCWVVK*TQPSKI
Trigger: AATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTGCTGGGTGGTTAAGTaGACACAACCTTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPCWVVK*TQPSKI
Trigger: AATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCATCCATCAGGTCTCCTaGCTTAGGAAGGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIIHQVS*LRKAEW
Trigger: CCATTCTGCCTTCCTAAGGCAGGAGACCTGATGGAT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGAGGTCACTTTCATTaGCATCTTGGTTTTGACCGG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPRGHFH*HLGFDR
Trigger: CCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCAAGGGCTGCTGGTTaGCTATTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPRAAG*LFLWLF
Trigger: AAATAACCATAAAAATAGGCAACCAGCAGCCCTTGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAATAGCCATTTGTATTaGTCCTGTTACCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLANSHLY*SCYQKA
Trigger: CGCTTTCTGGTAACAGGAGCAATACAAATGGCTATT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAATAGCCATTTGTATTaGTCCTGTTACCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPNSHLY*SCYQKA
Trigger: CGCTTTCTGGTAACAGGAGCAATACAAATGGCTATT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTTACCATATGGTCCCTaGCTCCTCAGGATTCCATCA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARLPYGP*LLRIPS
Trigger: TGATGGAATCCTGAGGAGGCAGGGACCATATGGTAA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGCTCACAGCAACCTCTaGCTCCTGTGTTCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLAHSNL*LLCSSY
Trigger: ATAGCTTGAACACAGGAGGCAGAGGTTGCTGTGAGC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGACTGGGCCTGAGCTaGATAGGCAGCATGCCACCT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPRLGLS*IGSMPP
Trigger: AGGTGGCATGCTGCCTATCCAGCTCAGGCCCAGTCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTCTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFLVGVT*SPGHPS
Trigger: AGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAG...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTGTCAGGGACCTGGTTaGTGTTACCTGGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYCQGPG*CYLVSR
Trigger: CCGGGAGACCAGGTAACACCAACCAGGTCCCTGACA...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAAGGATTTCCTGCACTaGCTGCAGTCAAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPKDFLH*LQSKSF
Trigger: GAAACTCTTTGACTGCAGCCAGTGCAGGAAATCCTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTGTAGGGCTCCTCTTTaGAGTGACTGCTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAICRAPL*SDCSEE
Trigger: TTCCTCAGAGCAGTCACTCCAAAGAGGAGCCCTACA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGTTTCCTCTGGTGACTaGAAAGGGTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAVSSGD*KGYVSQ
Trigger: TTGGGAGACATACCCTTTCCAGTCACCAGAGGAAAC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACATATGCTGCATTTGTaGCACTTTTTCCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAHMLHL*HFFPML
Trigger: AAGCATTGGGAAAAAGTGCCACAAATGCAGCATATG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTATTTTCACCTGCTCATaGCAATCCAGAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPIFTCS*QSRAGK
Trigger: CTTACCTGCTCTGGATTGCCATGAGCAGGTGAAAAT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAAAGGGACTTTTCCATaGTTACAACACCAACTGACA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAKGTFP*LQHQLT
Trigger: TGTCAGTTGGTGTTGTAACCATGGAAAAGTCCCTTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAAAGGGACTTTTCCATaGTTACAACACCAACTGACA +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPKGTFP*LQHQLT
Trigger: TGTCAGTTGGTGTTGTAACCATGGAAAAGTCCCTTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAAAGGGACTTTTCCATaGTTACAACACCAACTGACA +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMKGTFP*LQHQLT
Trigger: TGTCAGTTGGTGTTGTAACCATGGAAAAGTCCCTTT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAAATATCCCTATACTaGGGCAGGAACTTTACAAGG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKISLY*GRNFTR
Trigger: CCTTGTAAAGTTCCTGCCCCAGTATAGGGATATTTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGGAACCAAGAGAGGTaGGGCCACGGGTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPRNQER*GHGFRG
Trigger: GCCTCTAAACCCGTGGCCCCACCTCTCTTGGTTCCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGTGTGTGTTTGTGGGTaGCTTCCAGTCAACATTTCA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPVCVCG*LPVNIS
Trigger: TGAAATGTTGACTGGAAGCCACCCACAAACACACAC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGCAGGTGTGTGTTTGTaGGTGGCTTCCAGTCAACAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIAGVCL*VASSQH
Trigger: ATGTTGACTGGAAGCCACCCACAAACACACACCTGC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGCAGGTGTGTGTTTGTaGGTGGCTTCCAGTCAACAT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWAGVCL*VASSQH
Trigger: ATGTTGACTGGAAGCCACCCACAAACACACACCTGC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGCCCCAAGGGCTGCTaGTTGCCTATTTTTATGGTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASPKGC*LPIFMV
Trigger: AACCATAAAAATAGGCAACCAGCAGCCCTTGGGGCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACAAAGAGGAAGTGGCTaGGCTTTCTTATCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGQRGSG*AFLSAC
Trigger: ACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCCTTTGTAGGGACATaGATGAAGGTGGAAATAATC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASFVGT*MKVEII
Trigger: GATTATTTCCACCTTCATCCATGTCCCTACAAAGGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAATGCCTTAACCGTCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLNALTV*ECSPVG
Trigger: ACCTACTGGGCTGCATTCCCAGACGGTTAAGGCATT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTGGTGGGTTTTAGCTaGCTTCTTTACTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLVGFS*LLYCNL
Trigger: CAGGTTGCAGTAAAGAAGCCAGCTAAAACCCACCAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTAGTGGCTTCTACTTaGCCTTTTCTACCAGAATTA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLVAST*PFLPEL
Trigger: TAATTCTGGTAGAAAAGGCCAAGTAGAAGCCACTAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCCCAGGCAGCCCCTTTaGAAAACAGTTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLPRQPL*KTVWHF
Trigger: GAAATGCCAAACTGTTTTCCAAAGGGGCTGCCTGGG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCTTTCCCTCACGCCATaGCAAAAGCATCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLSLTP*QKHLHQ
Trigger: CTGATGGAGATGCTTTTGCCATGGCGTGAGGGAAAG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGGTTCATTTTCAGGTaGAAGTGTAGGAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGRFIFR*KCRKHR
Trigger: CCTGTGCTTCCTACACTTCCACCTGAAAATGAACCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTAGCAATCTTCCCACCTaGGCCTCCCGAAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFSNLPT*ASRSGG
Trigger: CCCACCACTTCGGGAGGCCCAGGTGGGAAGATTGCT...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATGCTGCTCCTGAGAGGTaGAGCAAGGGACCATATCTG +
Preference number: 4 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHAAPER*SKGPYL
Trigger: CAGATATGGTCCCTTGCTTCACCTCTCAGGAGCAGC...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTGCCTGCTCTTCTGTTaGAAAGATTCTCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLCLLFC*KDSLSP
Trigger: TGGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATCTTTTCCTGTCCTGTaGCTGAAATTGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGSFPVL*LKLVSS
Trigger: AGAAGAGACCAATTTCAGTCACAGGACAGGAAAAGA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAAGACTATTACTTCCTaGTACTTCAGAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAKTITS*YFRVFS
Trigger: GGAAAAGACTCTGAAGTATCAGGAAGTAATAGTCTT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTAAGACTATTACTTCCTaGTACTTCAGAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPKTITS*YFRVFS
Trigger: GGAAAAGACTCTGAAGTATCAGGAAGTAATAGTCTT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGTCACTGCACTTAAATaGCACTCCCACTGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLVTALK*HSHCVK
Trigger: CTTCACACAGTGGGAGTGTCATTTAAGTGCAGTGAC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGAGCTGCCCTATACTaGTTCAATTCAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPRAALY*FNSRNF
Trigger: GAAATTTCTTGAATTGAATCAGTATAGGGCAGCTCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGTCAGGAGATTGCCTaGAGCCTTCACGACATTCAT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSQEIA*SLHDIH
Trigger: ATGAATGTCGTGAAGGCTTCAGGCAATCTCCTGACT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGTCAGGAGATTGCCTaGAGCCTTCACGACATTCAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISQEIA*SLHDIH
Trigger: ATGAATGTCGTGAAGGCTTCAGGCAATCTCCTGACT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAACGTTTCTCACCAGTaGGGATTTTTGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARNVSHQ*GFLAPH
Trigger: ATGTGGAGCCAAAAATCCTCACTGGTGAGAAACGTT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGCCTCTCTCGAGTATaGAATCTCTTGTGGCTAATG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGLSRV*NLLWLM
Trigger: CATTAGCCACAAGAGATTTCATACTCGAGAGAGGCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTTTCACCCTTTTACTaGGTCCTTGGATCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALSPFY*VLGSVV
Trigger: AACCACAGATCCAAGGACTCAGTAAAAGGGTGAAAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGCGTTTATATCTGCTaGGGCCGAGGATCCTATAGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISVYIC*GRGSYR
Trigger: TCTATAGGATCCTCGGCCTCAGCAGATATAAACGCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTATTCCATACTCTACTaGAAAAGACATCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPYSILY*KRHLPG
Trigger: ACCTGGAAGATGTCTTTTTCAGTAGAGTATGGAATA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGATGCAGAGGTTCATTaGCTTGCTCAAGATCAATCC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARDAEVH*LAQDQS
Trigger: GGATTGATCTTGAGCAAGTCAATGAACCTCTGCATC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTCAGAAACTGTCAACTaGAGCCAAACAGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARSETVN*SQTAQN
Trigger: GTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTGA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTACCACACTGAACAGGTaGCAGAAAGACCTTCAAATA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPTTLNR*QKDLQI
Trigger: TATTTGAAGGTCTTTCTGTCACCTGTTCAGTGTGGT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTACTCATAAAGCAGTGTaGATTATCGTTGTTCCACGC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPTHKAV*IIVVPR
Trigger: GCGTGGAACAACGATAATTCACACTGCTTTATGAGT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCCAATTTTTGCAGGTaGGGAAATGGAAGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARPNFCR*GNGSLE
Trigger: TTCAAGGCTTCCATTTCCTCACCTGCAAAAATTGGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTATAGTGTTACTTCCTaGTGTTGCCATGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPYSVTS*CCHGIF
Trigger: AAAAATGCCATGGCAACATCAGGAAGTAACACTATA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTATAGTGTTACTTCCTaGTGTTGCCATGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPYSVTS*CCHGIF
Trigger: AAAAATGCCATGGCAACATCAGGAAGTAACACTATA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGCAATTACCAGAACTaGGGGTTCCTCTCCTTTTTA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPSNYQN*GFLSFL
Trigger: TAAAAAGGAGAGGAACCCTCAGTTCTGGTAATTGCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTGGTTCAAATACCTCTaGCACTTTTACCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIWFKYL*HFYPAP
Trigger: AGGGGCTGGGTAAAAGTGTCAGAGGTATTTGAACCA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTACAACTCAAAGCAAATaGAGACAGCCATTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPTTQSK*RQPFSA
Trigger: AGCTGAGAATGGCTGTCTTCATTTGCTTTGAGTTGT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACCATGGTGGCATTTTaGGTCTCCTGTAATTACTGC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATMVAF*VSCNYC
Trigger: GCAGTAATTACAGGAGACTCAAAATGCCACCATGGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGTCTGATGGGGTTATaGGAGAAATGCCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGLMGL*EKCPGR
Trigger: CCTCCCTGGGCATTTCTCTCATAACCCCATCAGACC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGGACAGACAACTCAATaGAGTCTCAGAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLGQTTQ*SLREPF
Trigger: GAATGGCTCTCTGAGACTTCATTGAGTTGTCTGTCC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGTGGCTCAGCCAAGTTaGCACCTAAAATTTACCCTC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWVAQPS*HLKFTL
Trigger: GAGGGTAAATTTTAGGTGTCAACTTGGCTGAGCCAC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGCCAGGAAGTCACGTaGTTCTATTTCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSQEVT*FYFIGR
Trigger: CCTCCCTATGAAATAGAAGCACGTGACTTCCTGGCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGCCAGGAAGTCACGTaGTTCTATTTCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISQEVT*FYFIGR
Trigger: CCTCCCTATGAAATAGAAGCACGTGACTTCCTGGCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATGCAGGAGTATCGGATTaGCCAGCCAGGAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYAGVSD*PARKSR
Trigger: ACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGC...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATTGATCCTTCTGCCTaGTCTTCTGTTGAAAAGATT +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMIDPSA*SSVEKI
Trigger: AATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGCTGTAGGTGAGAGCTaGCCTATACTGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAAVGES*PILIQF
Trigger: GAATTGAATCAGTATAGGGCAGCTCTCACCTACAGC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGTGGAAGGATTTCCTaGACTGGCTGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISGRIS*TGCSQR
Trigger: TCTTTGACTGCAGCCAGTGCAGGAAATCCTTCCACT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGCACTTTTTCCCAATaGTTATGTCCTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGTFSQ*LCPGVQ
Trigger: CTGGACTCCAGGACATAAGCATTGGGAAAAAGTGCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTATATGGTTTTTCATATaGCGAGCCAGGTTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPIWFFI*RARFED
Trigger: GTCTTCGAACCTGGCTCGGCATATGAAAAACCATAT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAACCTTCCAAGATTTTaGAAATTGCCTGGCACAATA +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMNLPRF*KLPGTI
Trigger: TATTGTGCCAGGCAATTTGCAAAATCTTGGAAGGTT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAACCTTCCAAGATTTTaGAAATTGCCTGGCACAATA +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPNLPRF*KLPGTI
Trigger: TATTGTGCCAGGCAATTTGCAAAATCTTGGAAGGTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCTTCTGCTGATGAAATaGAGGCTTTTCCCAATCTTG +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLLLMK*RLFPIL
Trigger: CAAGATTGGGAAAAGCCTGCATTTCATCAGCAGAAG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTTCTGCTGATGAAATaGAGGCTTTTCCCAATCTTG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLLLMK*RLFPIL
Trigger: CAAGATTGGGAAAAGCCTGCATTTCATCAGCAGAAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGGCAGAATGGTGACTTaGACACATCGTTCCAATACA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARGRMVT*THRSNT
Trigger: TGTATTGGAACGATGTGTGCAAGTCACCATTCTGCC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAATTTGCCCTTCCCAATaGACAATCACTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAICPSQ*TITLIN
Trigger: ATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAAT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTCAGCAGGCCAGCTTTaGAACATCCTAACAAGGAGA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSAGQL*NILTRR
Trigger: TCTCCTTGTTAGGATGTTGCAAAGCTGGCCTGCTGA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATCCTGTACCCATCCAATaGACATCTGGGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYPVPIQ*TSGLWQ
Trigger: CTGCCAGAGCCCAGATGTGCATTGGATGGGTACAGG...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGCATGCCACCTGCCTaGAGGCATCACTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSMPPA*RHHSCS
Trigger: TGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATAGCATGCCACCTGCCTaGAGGCATCACTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHSMPPA*RHHSCS
Trigger: TGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCT...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAATTTCTTCTTAGCATaGGTTTCTCGGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGANFFLA*VSRCRR
Trigger: CCGTCTGCACCGAGAAACCCATGCTAAGAAGAAATT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAAGGATTTCCTGCACTaGCTGCAGTCAAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARKDFLH*LQSKSF
Trigger: GAAACTCTTTGACTGCAGCCAGTGCAGGAAATCCTT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTTTGGCTCCACATTTaGAGTCTTTTCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPFWLHI*SLFTFM
Trigger: CATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTTTGGCTCCACATTTaGAGTCTTTTCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPFWLHI*SLFTFM
Trigger: CATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTACCAGTGAGGATTTTTaGCTCCACATTTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPTSEDF*LHIWSL
Trigger: AAGACTCCAAATGTGGAGCCAAAAATCCTCACTGGT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGTTTCCTCTGGTGACTaGAAAGGGTATGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLVSSGD*KGYVSQ
Trigger: TTGGGAGACATACCCTTTCCAGTCACCAGAGGAAAC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACAAAACAGAAAGGGCTaGGCCCTTTATCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGQNRKG*ALYQSY
Trigger: GTAACTTTGATAAAGGGCCCAGCCCTTTCTGTTTTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAACCACAAAGGGCAGTaGTCTCTCTCTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLNHKGQ*SLSSEL
Trigger: CAACTCTGAAGAGAGAGACCACTGCCCTTTGTGGTT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLACKDPR*QDFHLF
Trigger: GAACAGATGAAAATCCTGCCATCTTGGATCTTTACA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGACCAGATCTCATACATaGAGAGGGGTATGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARTRSHT*RGVCEA
Trigger: AGCTTCACATACCCCTCTCCATGTATGAGATCTGGT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGACATCTTCCAGGTTaGTTTCTTCTCATTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARHLPG*FLLISR
Trigger: TCTTGAAATGAGAAGAAACCAACCTGGAAGATGTCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAGACATCTTCCAGGTTaGTTTCTTCTCATTTCAAGA +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMRHLPG*FLLISR
Trigger: TCTTGAAATGAGAAGAAACCAACCTGGAAGATGTCT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTACAAGGTATCCTGTaGCAAAGGGAGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILQGIL*QREQRW
Trigger: CCATCTCTGCTCCCTTTGCCACAGGATACCTTGTAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGTGTGTGTTTGTGGGTaGCTTCCAGTCAACATTTCA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARVCVCG*LPVNIS
Trigger: TGAAATGTTGACTGGAAGCCACCCACAAACACACAC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGTGTGTGTTTGTGGGTaGCTTCCAGTCAACATTTCA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAVCVCG*LPVNIS
Trigger: TGAAATGTTGACTGGAAGCCACCCACAAACACACAC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGCACTTACCCACACTTaGGCTTTCAAAAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARALTHT*AFKNVP
Trigger: TGGCACATTTTTGAAAGCCCAAGTGTGGGTAAGTGC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGCCCCAAGGGCTGCTaGTTGCCTATTTTTATGGTT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISPKGC*LPIFMV
Trigger: AACCATAAAAATAGGCAACCAGCAGCCCTTGGGGCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACCAAGAGAGAGTTCTTaGACCTTGCTCAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGPRESS*TLLKKR
Trigger: TCTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCAAAGAGGAAGTGGCTaGGCTTTCTTATCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARQRGSG*AFLSAC
Trigger: ACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCGTCTTGGTTTTGGTaGGTTTTAGCTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPSWFW*VLAGFF
Trigger: AAAGAAGCCAGCTAAAACCCACCAAAACCAAGACGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCACCGTCTTGGTTTTaGTGGGTTTTAGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISPSWF*WVLAGF
Trigger: GAAGCCAGCTAAAACCCACCAAAACCAAGACGGTGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTCTCATCACCGTCTTaGTTTTGGTGGGTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPFSSPS*FWWVLA
Trigger: AGCTAAAACCCACCAAAACCAAGACGGTGATGAGAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACTGTCATGGCACTGGTaGGAGGGTAGCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPLSWHW*EGSSED
Trigger: ATCCTCACTGCTACCCTCCCACCAGTGCCATGACAG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCTAAGTGTTACCATATaGTCCCTGCCTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILSVTI*SLPPQD
Trigger: ATCCTGAGGAGGCAGGGACCATATGGTAACACTTAG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCTAAGTGTTACCATATaGTCCCTGCCTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLSVTI*SLPPQD
Trigger: ATCCTGAGGAGGCAGGGACCATATGGTAACACTTAG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATACTCTGAGGAACCATaGTGGCATTTTGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAYSEEP*WHFESP
Trigger: AGGAGACTCAAAATGCCACCATGGTTCCTCAGAGTA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGATTACTTTTACTGTATaGATCAGGGAACTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QISVGQTIQDPALAALSMITFTV*IRELVW
Trigger: CCACACTAGTTCCCTGATCCATACAGTAAAAGTAAT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGAACAGAACAAACCTaGGCCTGGCTCAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWRTEQT*AWLSNN
Trigger: GTTGTTACTGAGCCAGGCCCAGGTTTGTTCTGTTCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp TTCCTTCACGTCTTTGCTCACATTTCACCTTCTCAGTaGAGGCCCTCCCTGACCAGACTATCTAAAATCACG +
Preference number: 4 (lower is better)
Translates to: FLHVFAHISPSQ*RPSLTRLSKIT
Trigger: CGTGATTTTAGATAGTCTGGTCAGGGAGGGCCTCAACTGAGAAGGTGAAATGTGAGCAAAGACGTGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 72 bp ATTCAGATTCAAACCACATCACTCCTCAACTCAAAATaGTCCAAAAGCTCCCTGCCTCCCTCTGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IQIQTTSLLNSK*SKSSLPPSEPA
Trigger: AGCTGGCTCAGAGGGAGGCAGGGAGCTTTTGGACAATTTTGAGTTGAGGAGTGATGTGGTTTGAATCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 72 bp AATCTCCCACCTTTCAACAATTCTAGCCACGTCTCTTaGTTCCTGCTTTGCACTTTGCTCCACATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NLPPFNNSSHVS*FLLCTLLHMRW
Trigger: CCACCTCATGTGGAGCAAAGTGCAAAGCAGGAACAAAGAGACGTGGCTAGAATTGTTGAAAGGTGGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATCTTTTCCTGTCCTGTaGCTGAAATTGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASFPVL*LKLVSS
Trigger: AGAAGAGACCAATTTCAGTCACAGGACAGGAAAAGA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGTAGTCATAGTGGTGTaGACTCATTCTGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPVVIVV*THSEVF
Trigger: AAACACTTCAGAATGAGTTCACACCACTATGACTAC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAATGAACAATAAAGGCTaGCCTATAGGCAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGMNNKG*PIGKVL
Trigger: AAGGACTTTGCCTATAGGTCAGCCTTTATTGTTCAT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAACGTTTCTCACCAGTaGGGATTTTTGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAINVSHQ*GFLAPH
Trigger: ATGTGGAGCCAAAAATCCTCACTGGTGAGAAACGTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAACATCTTCAGTGCCATaGACAGCTGCTGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPTSSVP*TAAAVG
Trigger: TCCTACGGCAGCAGCTGTTCATGGCACTGAAGATGT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCAGAAACTGTCAACTaGAGCCAAACAGCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISETVN*SQTAQN
Trigger: GTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCCCAATTTTTGCAGGTaGGGAAATGGAAGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLPNFCR*GNGSLE
Trigger: TTCAAGGCTTCCATTTCCTCACCTGCAAAAATTGGG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCCAATTTTTGCAGGTaGGGAAATGGAAGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPNFCR*GNGSLE
Trigger: TTCAAGGCTTCCATTTCCTCACCTGCAAAAATTGGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGCAATTACCAGAACTaGGGGTTCCTCTCCTTTTTA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASNYQN*GFLSFL
Trigger: TAAAAAGGAGAGGAACCCTCAGTTCTGGTAATTGCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGTGGGAATTGAACAATaGGAAAACATGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAVGIEQ*ENMDTG
Trigger: TCCTGTGTCCATGTTTTCTCATTGTTCAATTCCCAC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTCATAGGTGGGAATTaGACAATGAGAAAACATGGA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLIGGN*TMRKHG
Trigger: TCCATGTTTTCTCATTGTTCAATTCCCACCTATGAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTATAGGGTAACTTCCTaGTGTTGCCATGGCAACTGT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIYRVTS*CCHGNC
Trigger: ACAGTTGCCATGGCAACATCAGGAAGTTACCCTATA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAGCTGGGATTACAGTaGGTCCATATCTCAACAACT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKLGLQ*VHISTT
Trigger: AGTTGTTGAGATATGGACTCACTGTAATCCCAGCTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACCCTCCCTGGGTGGGTaGGCAGGTATTTACATGATA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPPSLGG*AGIYMI
Trigger: TATCATGTAAATACCTGCTCACCCACCCAGGGAGGG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGAAGCTGTGGGTTTGTaGACTAGATCAAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIEAVGL*TRSRLG
Trigger: TCCAAGTCTTGATCTAGTTCACAAACCCACAGCTTC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAATTCTGAATGGTCTTaGACATCATGCACTGCACCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGANSEWS*TSCTAP
Trigger: AGGTGCAGTGCATGATGTTCAAGACCATTCAGAATT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGCTGAGACAGGAGATTaGGGATGTGGACATTTTGTT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWAETGD*GCGHFV
Trigger: AACAAAATGTCCACATCCTCAATCTCCTGTCTCAGC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGCTGAGACAGGAGATTaGGGATGTGGACATTTTGTT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLAETGD*GCGHFV
Trigger: AACAAAATGTCCACATCCTCAATCTCCTGTCTCAGC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGTGTGCATGAACTCTaGAGGCAGTCTGCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGVHEL*RQSAEE
Trigger: TTCTTCCGCAGACTGCCTTCAGAGTTCATGCACACC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGATCCAGCACTCCCTCTaGTCTTCTCTGATTCACTTT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWIQHSL*SSLIHF
Trigger: AAAGTGAATCAGAGAAGAGCAGAGGGAGTGCTGGAT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAAGGGACATCTTCAGTaGCATGAACAGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPKGHLQ*HEQLLP
Trigger: CGGCAGCAGCTGTTCATGGCACTGAAGATGTCCCTT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGAGGTTCATTGACTTaGTCAAGATCAATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARGSLT*SRSILP
Trigger: TGGCAGGATTGATCTTGAGCAAGTCAATGAACCTCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACAGAGGTAATTTTGTaGAAGATATTTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATEVIL*KIFSAW
Trigger: CCATGCAGAAAATATCTTGCACAAAATTACCTCTGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGGCTTTCAAAAATGTaGCAGCTTTCTGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGLSKM*QLSECE
Trigger: CTCACACTCAGAAAGCTGGCACATTTTTGAAAGCCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTTCTGCTGATGAAATaGAGGCTTTTCCCAATCTTG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALLLMK*RLFPIL
Trigger: CAAGATTGGGAAAAGCCTGCATTTCATCAGCAGAAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGGCAGAATGGTGACTTaGACACATCGTTCCAATACA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLGRMVT*THRSNT
Trigger: TGTATTGGAACGATGTGTGCAAGTCACCATTCTGCC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGGCTTCTTTACCACATaGTGTTTTATTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARGFFTT*CFIGKV
Trigger: GACCTTGCCAATAAAACAGCATGTGGTAAAGAAGCC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGAGGTCACTTTCATTaGCATCTTGGTTTTGACCGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIRGHFH*HLGFDR
Trigger: CCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGAGTTCTTGGACCTTaGTCAAGAAAAGAATTCGGG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARRVLGP*SRKEFG
Trigger: CCCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGAGTTCTTGGACCTTaGTCAAGAAAAGAATTCGGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARVLGP*SRKEFG
Trigger: CCCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTAACCTGCACATTGTaGACATGTACCCTAAAAGTA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLTCTL*TCTLKV
Trigger: TACTTTTAGGGTACATGTGCACAATGTGCAGGTTAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGCTGGCTTCTTTACTaGAACCTGCTTTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASWLLY*NLLYQQ
Trigger: TTGCTGATAAAGCAGGTTGCAGTAAAGAAGCCAGCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATCATGGATTCATCCCTaGAGTAGGTTCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASWIHP*SRFIFR
Trigger: CCTGAAAATGAACCTACTGCAGGGATGAATCCATGA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCAAATGCCAACATTTGCTaGGACATCAGAAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAANANIC*DIRSHQ
Trigger: CTGATGACTTCTGATGTCCCAGCAAATGTTGGCATT...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAATGCCAACATTTGCTaGGACATCAGAAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGANANIC*DIRSHQ
Trigger: CTGATGACTTCTGATGTCCCAGCAAATGTTGGCATT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATCCTGGCAGCCTGCACTaGAGTATAGCTTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHPGSLH*SIAFIL
Trigger: GAGGATGAAAGCTATACTCCAGTGCAGGCTGCCAGG...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACCTGGCAGCCTGCACTaGAGTATAGCTTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPPGSLH*SIAFIL
Trigger: GAGGATGAAAGCTATACTCCAGTGCAGGCTGCCAGG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTGTTTGTTTTACTCTaGAGGTCATCTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPLFVLL*RSSPVG
Trigger: TCCTACAGGAGATGACCTCCAGAGTAAAACAAACAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAATTTCTTCTTAGCATaGGTTTCTCGGTGCAGACGG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLNFFLA*VSRCRR
Trigger: CCGTCTGCACCGAGAAACCCATGCTAAGAAGAAATT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGACCAGTGAGGATTTTTaGCTCCACATTTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARTSEDF*LHIWSL
Trigger: AAGACTCCAAATGTGGAGCCAAAAATCCTCACTGGT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACAAAACAGAAAGGGCTaGGCCCTTTATCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAQNRKG*ALYQSY
Trigger: GTAACTTTGATAAAGGGCCCAGCCCTTTCTGTTTTG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAGAGCTTTCAAATCCTTaGGATTCTGTCACTAGCTTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAELSNP*DSVTSF
Trigger: GAAGCTAGTGACAGAATCCCAAGGATTTGAAAGCTC...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTTCTGTTAAACAGATaGACCGCTGCTGCCTATGCA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWFLLNR*TAAAYA
Trigger: TGCATAGGCAGCAGCGGTCCATCTGTTTAACAGAAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGAGTCCTTGGATCTGTaGTTAACCCTTATAAAATAT +
Preference number: 4 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPESLDL*LTLIKY
Trigger: ATATTTTATAAGGGTTAACCACAGATCCAAGGACTC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAAAATATCCCTATACTaGGGCAGGAACTTTACAAGG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGKISLY*GRNFTR
Trigger: CCTTGTAAAGTTCCTGCCCCAGTATAGGGATATTTT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGTGTGTGTTTGTGGGTaGCTTCCAGTCAACATTTCA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWVCVCG*LPVNIS
Trigger: TGAAATGTTGACTGGAAGCCACCCACAAACACACAC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGCACTTACCCACACTTaGGCTTTCAAAAATGTGCCA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIALTHT*AFKNVP
Trigger: TGGCACATTTTTGAAAGCCCAAGTGTGGGTAAGTGC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCAAGAGAGAGTTCTTaGACCTTGCTCAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARPRESS*TLLKKR
Trigger: TCTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGACCTCCAAGACACCTTaGCATTTTCTTCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARTSKTP*HFLLAF
Trigger: AAAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCAAAGAGGAAGTGGCTaGGCTTTCTTATCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWQRGSG*AFLSAC
Trigger: ACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCAAAGAGGAAGTGGCTaGGCTTTCTTATCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIQRGSG*AFLSAC
Trigger: ACAAGCTGATAAGAAAGCCCAGCCACTTCCTCTTTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCTGAGGAACCATGGTaGCATTTTGAGTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISEEPW*HFESPV
Trigger: TACAGGAGACTCAAAATGCCACCATGGTTCCTCAGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTACTCTGAGGAACCATaGTGGCATTTTGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWYSEEP*WHFESP
Trigger: AGGAGACTCAAAATGCCACCATGGTTCCTCAGAGTA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACTAGTGGCTTCTACTTaGCCTTTTCTACCAGAATTA +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGLVAST*PFLPEL
Trigger: TAATTCTGGTAGAAAAGGCCAAGTAGAAGCCACTAG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTCTAAGCCTCATCTTTaGGGAGGTGAATTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWSKPHL*GGEFES
Trigger: GCTCTCAAATTCACCTCCCCAAAGATGAGGCTTAGA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTCATCAGCAAGTGACTaGAATTACCAGCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARSSASD*NYQHFC
Trigger: ACAGAAATGCTGGTAATTTCAGTCACTTGCTGATGA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAAREVISK*LKLPAF
Trigger: AAATGCTGGTAATTTCAGTCACTTGCTGATGACTTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTCCTGTCCTGTGACTaGAATTGGTCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWFLSCD*NWSLLS
Trigger: AGAAAGAAGAGACCAATTTCAGTCACAGGACAGGAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTCCTGTCCTGTGACTaGAATTGGTCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIFLSCD*NWSLLS
Trigger: AGAAAGAAGAGACCAATTTCAGTCACAGGACAGGAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATCATGCAACCTCATATaGCGAGTAAAGTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASCNLI*RVKFDL
Trigger: GAGATCAAACTTTACTCGTCATATGAGGTTGCATGA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGGTATGTCTCCCAATaGACTCTTTCCCACACCACT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGYVSQ*TLSHTT
Trigger: AGTGGTGTGGGAAAGAGTTCATTGGGAGACATACCC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGACTCATAAAGCAGTGTaGATTATCGTTGTTCCACGC +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWTHKAV*IIVVPR
Trigger: GCGTGGAACAACGATAATTCACACTGCTTTATGAGT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACAACTAAAACCTGGCTaGTATAAAATCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAQLKPG*YKISLL
Trigger: CAGCAAGGAGATTTTATATCAGCCAGGTTTTAGTTG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTCATAGGTGGGAATTaGACAATGAGAAAACATGGA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALIGGN*TMRKHG
Trigger: TCCATGTTTTCTCATTGTTCAATTCCCACCTATGAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAAGCTGGGATTACAGTaGGTCCATATCTCAACAACT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIKLGLQ*VHISTT
Trigger: AGTTGTTGAGATATGGACTCACTGTAATCCCAGCTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGACTTGGAATTGACTaGGTGATTGTAACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARLGID*VIVTLC
Trigger: ACACAGAGTTACAATCACTCAGTCAATTCCAAGTCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACACTGGACAGCCTTGTaGATAATTCTTCTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAHWTAL*IILLSF
Trigger: AAAAGAGAGAAGAATTATTCACAAGGCTGTCCAGTG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGTAGATGGTGTGCATaGACTCTGAAGGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSRWCA*TLKAVC
Trigger: GCAGACTGCCTTCAGAGTTCATGCACACCATCTACT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAACAATGCCAACATTTaGTGGGACATCAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGANNANI*WDIRSH
Trigger: ATGACTTCTGATGTCCCAGCAAATGTTGGCATTGTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATTTTCCCACATATGCTaGATTTGTGGCACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAFSHIC*ICGTFS
Trigger: GGAAAAAGTGCCACAAATGCAGCATATGTGGGAAAA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCATATGGTTTTTCATATaGCGAGCCAGGTTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIIWFFI*RARFED
Trigger: GTCTTCGAACCTGGCTCGGCATATGAAAAACCATAT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGAGGTTCATTGACTTaGTCAAGATCAATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIRGSLT*SRSILP
Trigger: TGGCAGGATTGATCTTGAGCAAGTCAATGAACCTCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGAGGTTCATTGACTTaGTCAAGATCAATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWRGSLT*SRSILP
Trigger: TGGCAGGATTGATCTTGAGCAAGTCAATGAACCTCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAACCTTCCAAGATTTTaGAAATTGCCTGGCACAATA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPNLPRF*KLPGTI
Trigger: TATTGTGCCAGGCAATTTGCAAAATCTTGGAAGGTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCAAGGGCTGCTGGTTaGCTATTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPRAAG*LFLWLF
Trigger: AAATAACCATAAAAATAGGCAACCAGCAGCCCTTGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTAACCTGCACATTGTaGACATGTACCCTAAAAGTA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALTCTL*TCTLKV
Trigger: TACTTTTAGGGTACATGTGCACAATGTGCAGGTTAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGGGCAAGTCCGCAGTaGAAAGCAAAAACAAGTTTA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRASPQ*KAKTSL
Trigger: TAAACTTGTTTTTGCTTTGCACTGCGGACTTGCCCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAATTCTTCTCTCTTTTaGAAAACCCATGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGNSSLF*KTHVTV
Trigger: CACTGTGACATGGGTTTTGCAAAAGAGAGAAGAATT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGAAGAATTCTCTCTTaGCTGAGAGAGAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGRILS*LRESLG
Trigger: CCCCAGACTCTCTCTCAGGCAAGAGAGAATTCTTCC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATAAGGGACCATATCTGTaGAGATCGCAGGCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYKGPYL*RSQAPV
Trigger: TACAGGAGCCTGCGATCTGCACAGATATGGTCCCTT...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTCTAGGATCTGTGCCTTaGAGAGAACGTCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFLGSVP*RERQAS
Trigger: TGAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAG...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTAAAAGGGCAGGCATCTaGGCAGCAGGAGTATCGGAT +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFKRAGI*AAGVSD
Trigger: ATCCGATACTCCTGCTGCCCAGATGCCTGCCCTTTT...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATTGTTTGTTTTACTCTaGAGGTCATCTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALFVLL*RSSPVG
Trigger: TCCTACAGGAGATGACCTCCAGAGTAAAACAAACAA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCACATATGACTTACAGTaGAAGGATTTCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAITYDLQ*KDFLHW
Trigger: CCAGTGCAGGAAATCCTTCCACTGTAAGTCATATGT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGACATATGACTTACAGTaGAAGGATTTCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWTYDLQ*KDFLHW
Trigger: CCAGTGCAGGAAATCCTTCCACTGTAAGTCATATGT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACATATGCTGCATTTGTaGCACTTTTTCCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAHMLHL*HFFPML
Trigger: AAGCATTGGGAAAAAGTGCCACAAATGCAGCATATG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCAAAACAGAAAGGGCTaGGCCCTTTATCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIQNRKG*ALYQSY
Trigger: GTAACTTTGATAAAGGGCCCAGCCCTTTCTGTTTTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATGTAAAGATCCAAGATaGCAGGATTTTCATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGCKDPR*QDFHLF
Trigger: GAACAGATGAAAATCCTGCCATCTTGGATCTTTACA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGTTCCCTATTCAAGATaGAGTCACTCTGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIVPYSR*SHSGSN
Trigger: GTTTGAACCAGAGTGACTCCATCTTGAATAGGGAAC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCAGGCAATGATAGACTaGATTAAGAAAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARQAMID*IKKMWH
Trigger: GTGCCACATTTTCTTAATCCAGTCTATCATTGCCTG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACATACAATAATCCAGAATaGCAGGCATTATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVTEPGSKTRSGTFLCSTYNNPE*QALFSP
Trigger: TGGGGAGAATAATGCCTGCCATTCTGGATTATTGTA...TGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp GGTGTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCTCATCAGCAAGTGACTaGAATTACCAGCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: GVSYHTQPPLIFTIIQNGSSASD*NYQHFC
Trigger: ACAGAAATGCTGGTAATTTCAGTCACTTGCTGATGA...GCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWEVISK*LKLPAF
Trigger: AAATGCTGGTAATTTCAGTCACTTGCTGATGACTTC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VSYHTQPPLIFTIIQNGREVISK*LKLPAF
Trigger: AAATGCTGGTAATTTCAGTCACTTGCTGATGACTTC...CCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIEVISK*LKLPAF
Trigger: AAATGCTGGTAATTTCAGTCACTTGCTGATGACTTC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACAGAACAACCCAAGAAGGCAGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SKTRSGTFLCSTEQPKKAEVISK*LKLPAF
Trigger: AAATGCTGGTAATTTCAGTCACTTGCTGATGACTTC...TGCCTTCTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGAGCTGCCCTATACTaGTTCAATTCAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARRAALY*FNSRNF
Trigger: GAAATTTCTTGAATTGAATCAGTATAGGGCAGCTCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTCATGCAACCTCATATaGCGAGTAAAGTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSCNLI*RVKFDL
Trigger: GAGATCAAACTTTACTCGTCATATGAGGTTGCATGA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCATGCAACCTCATATaGCGAGTAAAGTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISCNLI*RVKFDL
Trigger: GAGATCAAACTTTACTCGTCATATGAGGTTGCATGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGTCAGGAGATTGCCTaGAGCCTTCACGACATTCAT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSQEIA*SLHDIH
Trigger: ATGAATGTCGTGAAGGCTTCAGGCAATCTCCTGACT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGCAAGGCTAACTGCATaGGAAGCCTTTCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPARLTA*EAFHPF
Trigger: AAAAGGGTGAAAGGCTTCTCATGCAGTTAGCCTTGC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATATTCCATACTCTACTaGAAAAGACATCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAYSILY*KRHLPG
Trigger: ACCTGGAAGATGTCTTTTTCAGTAGAGTATGGAATA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTATAGTGTTACTTCCTaGTGTTGCCATGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARYSVTS*CCHGIF
Trigger: AAAAATGCCATGGCAACATCAGGAAGTAACACTATA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCAACTAAAACCTGGCTaGTATAAAATCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIQLKPG*YKISLL
Trigger: CAGCAAGGAGATTTTATATCAGCCAGGTTTTAGTTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGACACCAAGAGGTTATaGAAAAGTTTACTACTCACA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARDTKRL*KSLLLT
Trigger: TGTGAGTAGTAAACTTTTTCATAACCTCTTGGTGTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAAGAAAGTAAAGTGGTaGAAGGACAGCTACTCCATA +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWKKVKW*KDSYSI
Trigger: TATGGAGTAGCTGTCCTTTCACCACTTTACTTTCTT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAAACCCATGTCACAGTaGTTGATTTACTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIKPMSQ*LIYCVR
Trigger: TCTCACACAGTAAATCAATCACTGTGACATGGGTTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GGTGTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGATGGATAGAAGCATaGGGATATCGATTACTTACC +
Preference number: 4 (lower is better)
Translates to: GVSYHTQPPLIFTIIQNGRWIEA*GYRLLT
Trigger: GGTAAGTAATCGATATCCTCATGCTTCTATCCATCT...GCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp TCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACAGAACAACCCAAGAAGGCAAACAATGCCAACATTTaGTGGGACATCAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SKTRSGTFLCSTEQPKKANNANI*WDIRSH
Trigger: ATGACTTCTGATGTCCCAGCAAATGTTGGCATTGTT...TGCCTTCTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp GGTGTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAACAATGCCAACATTTaGTGGGACATCAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GVSYHTQPPLIFTIIQNGNNANI*WDIRSH
Trigger: ATGACTTCTGATGTCCCAGCAAATGTTGGCATTGTT...GCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAACAATGCCAACATTTaGTGGGACATCAGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLNNANI*WDIRSH
Trigger: ATGACTTCTGATGTCCCAGCAAATGTTGGCATTGTT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATAGCCAGGAAGTCACGTaGTTCTATTTCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYSQEVT*FYFIGR
Trigger: CCTCCCTATGAAATAGAAGCACGTGACTTCCTGGCT...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGATTGATCCTTCTGCCTaGTCTTCTGTTGAAAAGATT +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARIDPSA*SSVEKI
Trigger: AATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAAT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGCCTTCATTTTCACCTaGTCATGGCAATCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPAFIFT*SWQSRA
Trigger: TGCTCTGGATTGCCATGAGCAGGTGAAAATGAAGGC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAACCTTCCAAGATTTTaGAAATTGCCTGGCACAATA +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARNLPRF*KLPGTI
Trigger: TATTGTGCCAGGCAATTTGCAAAATCTTGGAAGGTT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAATAGCCATTTGTATTaGTCCTGTTACCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAINSHLY*SCYQKA
Trigger: CGCTTTCTGGTAACAGGAGCAATACAAATGGCTATT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATTTCAACTCATTCAGTaGAGGTTATGTTTGCATTCG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAFQLIQ*RLCLHS
Trigger: CGAATGCAAACATAACCTGCACTGAATGAGTTGAAA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTGTTTGTTTTACTCTaGAGGTCATCTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAILFVLL*RSSPVG
Trigger: TCCTACAGGAGATGACCTCCAGAGTAAAACAAACAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTTTTGGCTCCACATTTaGAGTCTTTTCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: KIQKRSGEESDLWELAARFWLHI*SLFTFM
Trigger: CATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCATATGCTGCATTTGTaGCACTTTTTCCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIHMLHL*HFFPML
Trigger: AAGCATTGGGAAAAAGTGCCACAAATGCAGCATATG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAAAATATCCCTATACTaGGGCAGGAACTTTACAAGG +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIKISLY*GRNFTR
Trigger: CCTTGTAAAGTTCCTGCCCCAGTATAGGGATATTTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACACATGCTGTTTTATTaGCAAGGTCTTTATGACTGT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAHMLFY*QGLYDC
Trigger: ACAGTCATAAAGACCTTGCCAATAAAACAGCATGTG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAAAGGTGTGGTAGCTaGCATACAAGTATTTACTCT +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKRCGS*HTSIYS
Trigger: AGAGTAAATACTTGTATGCCAGCTACCACACCTTTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTATTCTCACTCATAGGTaGGAATTGAACAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: LILAFCFNTSGWASEGAPILTHR*ELNNEK
Trigger: TTTCTCATTGTTCAATTCCCACCTATGAGTGAGAAT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGCCCCGAGGGCTGCTaGTTGTCTATTTTATGGTTT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSPEGC*LSILWF
Trigger: AAACCATAAAATAGACAACCAGCAGCCCTCGGGGCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTTCAGAACTAGAGGCTaGTTATCCCAGAAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLFRTRG*LSQKSL
Trigger: TAGACTTTTCTGGGATAACCAGCCTCTAGTTCTGAA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGAACAGAACAAACCTaGGCCTGGCTCAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPRTEQT*AWLSNN
Trigger: GTTGTTACTGAGCCAGGCCCAGGTTTGTTCTGTTCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAAGACTATTACTTCCTaGTACTTCAGAGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIKTITS*YFRVFS
Trigger: GGAAAAGACTCTGAAGTATCAGGAAGTAATAGTCTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR TCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCAATTGTGTTTTTGGTaGCTAAGTGTTACCATATGG +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLQLCFW*LSVTIW
Trigger: CCATATGGTAACACTTAGTCACCAAAAACACAATTG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGATCAAGACTTGGAATTaGCTGAGTGATTGTAACTCT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWIKTWN*LSDCNS
Trigger: AGAGTTACAATCACTCAGTCAATTCCAAGTCTTGAT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTAGCCAGGAAGTCACGTaGTTCTATTTCATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFSQEVT*FYFIGR
Trigger: CCTCCCTATGAAATAGAAGCACGTGACTTCCTGGCT...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGCTCAAGATCAATCCTaGCAAGAAAAGGCACACCAT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPAQDQS*QEKAHH
Trigger: ATGGTGTGCCTTTTCTTGGCAGGATTGATCTTGAGC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACAGAGGTAATTTTGTaGAAGATATTTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATEVIL*KIFSAW
Trigger: CCATGCAGAAAATATCTTGCACAAAATTACCTCTGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGGGCTTTCAAAAATGTaGCAGCTTTCTGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPGLSKM*QLSECE
Trigger: CTCACACTCAGAAAGCTGGCACATTTTTGAAAGCCC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATGCTGGGTGGTTAAGTaGACACAACCTTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPCWVVK*TQPSKI
Trigger: AATCTTGGAAGGTTGTGTGCACTTAACCACCCAGCA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGATTTGCCCTTCCCAATaGACAATCACTCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWICPSQ*TITLIN
Trigger: ATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAAT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAATTCTTCTCTCTTTTaGAAAACCCATGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWNSSLF*KTHVTV
Trigger: CACTGTGACATGGGTTTTGCAAAAGAGAGAAGAATT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGACATCTTCCAGGTTaGTTTCTTCTCATTTCAAGA +
Preference number: 4 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRHLPG*FLLISR
Trigger: TCTTGAAATGAGAAGAAACCAACCTGGAAGATGTCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCACATGCTGTTTTATTaGCAAGGTCTTTATGACTGT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWHMLFY*QGLYDC
Trigger: ACAGTCATAAAGACCTTGCCAATAAAACAGCATGTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCACATGCTGTTTTATTaGCAAGGTCTTTATGACTGT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIHMLFY*QGLYDC
Trigger: ACAGTCATAAAGACCTTGCCAATAAAACAGCATGTG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CCA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAAAAGGTGTGGTAGCTaGCATACAAGTATTTACTCT +
Preference number: 4 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWKRCGS*HTSIYS
Trigger: AGAGTAAATACTTGTATGCCAGCTACCACACCTTTT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCTTCAGGCAAAAGGTaGTTAACTAACACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISSGKR*LTNTQS
Trigger: ACTTTGAGTGTTAGTTAACCACCTTTTGCCTGAAGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp ATAAGTCACCATAACAACCACTTATTTTTCAGGAACTaGGGGCAGATCCTGTCCAGTTCAAACCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: ISHHNNHLFFRN*GQILSSSNQLR
Trigger: TCTCAACTGGTTTGAACTGGACAGGATCTGCCCCAAGTTCCTGAAAAATAAGTGGTTGTTATGGTGACTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR GCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTCTCAGCAGTCAACAATaGCAACATTTGCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFLSSQQ*QHLLGH
Trigger: ATGTCCCAGCAAATGTTGGCATTGTTGACTGCTGAG...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTTCAGGTACCTTTCTATaGAGCACAGAACAACCCAAG +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFSGTFL*STEQPK
Trigger: CTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGA...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAACCAGTGAGGATTTTTaGCTCCACATTTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPTSEDF*LHIWSL
Trigger: AAGACTCCAAATGTGGAGCCAAAAATCCTCACTGGT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTAATGCCAACATTTGCTaGGACATCAGAAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFNANIC*DIRSHQ
Trigger: CTGATGACTTCTGATGTCCCAGCAAATGTTGGCATT...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CCA 90 bp TACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTACAATAATCCAGAATaGCAGGCATTATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: YHTQPPLIFTIIQNGRHYYNNPE*QALFSP
Trigger: TGGGGAGAATAATGCCTGCCATTCTGGATTATTGTA...ATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
3UTR CAA 72 bp AAGGAGGAGCTTATAATTTCCTATAAAGTGCATGTCTaGGTGACTGTGCGTCAGTATATAGAGAACATCCTC +
Preference number: 4 (lower is better)
Translates to: KEELIISYKVHV*VTVRQYIENIL
Trigger: GAGGATGTTCTCTATATACTGACGCACAGTCACCAAGACATGCACTTTATAGGAAATTATAAGCTCCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 72 bp TCAATAAACTACCATCACTCAAAACTGGTTCGGATGTaGAAACTGATGACACTGCAGACACCAAGAGGTTAT +
Preference number: 4 (lower is better)
Translates to: SINYHHSKLVRM*KLMTLQTPRGY
Trigger: ATAACCTCTTGGTGTCTGCAGTGTCATCAGTTTCAACATCCGAACCAGTTTTGAGTGATGGTAGTTTATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGACACCAAGAGGTTATaGAAAAGTTTACTACTCACA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPDTKRL*KSLLLT
Trigger: TGTGAGTAGTAAACTTTTTCATAACCTCTTGGTGTC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR TCA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTAGATGGATAGAAGCATaGGGATATCGATTACTTACC +
Preference number: 4 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFRWIEA*GYRLLT
Trigger: GGTAAGTAATCGATATCCTCATGCTTCTATCCATCT...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR GCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAATTGATCCTTCTGCCTaGTCTTCTGTTGAAAAGATT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPIDPSA*SSVEKI
Trigger: AATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAAT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATCTTCAGGCAAAAGGTaGTTAACTAACACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPSSGKR*LTNTQS
Trigger: ACTTTGAGTGTTAGTTAACCACCTTTTGCCTGAAGA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAATTACTTTTACTGTATaGATCAGGGAACTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPITFTV*IRELVW
Trigger: CCACACTAGTTCCCTGATCCATACAGTAAAAGTAAT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CCA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAATTCTCACTCATAGGTaGGAATTGAACAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPILTHR*ELNNEK
Trigger: TTTCTCATTGTTCAATTCCCACCTATGAGTGAGAAT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
3UTR CAA 72 bp TGGTTAAGTGCACACAACCTTCCAAGATTTTGCAAATaGCCTGGCACAATATTTCTCACAATTTCTACTCAT +
Preference number: 4 (lower is better)
Translates to: WLSAHNLPRFCK*PGTIFLTISTH
Trigger: ATGAGTAGAAATTGTGAGAAATATTGTGCCAGGCAATTTGCAAAATCTTGGAAGGTTGTGTGCACTTAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
3UTR CAA 72 bp ATTCTTCTGCTGATGAAATGCAGGCTTTTCCCAATCTaGCTACCTAAACAATACTTCAGTGAAGTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: ILLLMKCRLFPI*LPKQYFSEVLK
Trigger: TTTTAAGACTTCACTGAAGTATTGTTTAGGTAGCAAGATTGGGAAAAGCCTGCATTTCATCAGCAGAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CCA 90 bp ATGGTCTCCTGGAGCTGGGCTGTCAGGGACCTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCTCTCGGGAAAAGGGCAGGCATCTGG +
Preference number: 5 (lower is better)
Translates to: MVSWSWAVRDLVGVT*SPGHPSLGKRAGIW
Trigger: CCAGATGCCTGCCCTTTTCCCGAGAGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000617032.1
ENST00000634579.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS GCA 90 bp AGGGACCATATCTGTGCAGATCGCAGGGCTCCTGTACCCATCCAATaGACATCTGGGCTCTGGGCAGGGCCCGGGTCCCTCCAGGATGTC +
Preference number: 5 (lower is better)
Translates to: RDHICADRRAPVPIQ*TSGLWAGPGSLQDV
Trigger: GACATCCTGGAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCCTGCGATCTGCACAGATATGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000634579.1
ENST00000634915.1
ENST00000635479.2
CDS GCA 90 bp AGCGCCCTCGCTCCCTCGAAGACTGGGCCTGAGCTGATGGCAGCATaGCACCTGCCTGGAGGCATCACTCCTGTTCAGGGACTAACCAGA +
Preference number: 5 (lower is better)
Translates to: SALAPSKTGPELMAA*HLPGGITPVQGLTR
Trigger: TCTGGTTAGTCCCTGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCATCAGCTCAGGCCCAGTCTTCGAGGGAGCGAGGGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCACACGCCAAGCGCTaGAGCCCAGCATCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPHAKR*SPASCS
Trigger: AGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS TCA 90 bp TTACTGTCTGAAGCGCCCTCGCTCCCTCGAAGACTGGGCCTGAGCTaGTGGCAGCATGCCACCTGCCTGGAGGCATCACTCCTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LLSEAPSLPRRLGLS*WQHATCLEASLLFR
Trigger: CCTGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCATCAGCTCAGGCCCAGTCTTCGAGGGAGCGAGGGCGCTTCAGACAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS GCA 90 bp AAGGGACCATATCTGTGCAGATCGCAGGCTCCTGTACCCATCCAATaGACATCTGGGCTCTGGCAGGGCCCGGGTCCCTCCAGGATGTCC +
Preference number: 5 (lower is better)
Translates to: KGPYLCRSQAPVPIQ*TSGLWQGPGPSRMS
Trigger: GGACATCCTGGAGGGACCCGGGCCCTGCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCTGCGATCTGCACAGATATGGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTGTCAGGGACCTGGTaGGTGTTACCTGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLSGTW*VLPGLP
Trigger: CGGGAGACCAGGTAACACCAACCAGGTCCCTGACAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS TCA 90 bp CTTCTTTACTGTCTGAAGCGCCCTCGCTCCCTCGAAGACTGGGCCTaGGCTGATGGCAGCATGCCACCTGCCTGGAGGCATCACTCCTGT +
Preference number: 5 (lower is better)
Translates to: LLYCLKRPRSLEDWA*ADGSMPPAWRHHSC
Trigger: ACAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCATCAGCTCAGGCCCAGTCTTCGAGGGAGCGAGGGCGCTTCAGACAGTAAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS CCA 90 bp ATATCTGTGCAGATCGCAGGCTCCTGTACCCATCCAATGCACATCTaGGCTCTGGCAGGGCCCGGGTCCCTCCAGGATGTCCCATCAAGG +
Preference number: 5 (lower is better)
Translates to: ISVQIAGSCTHPMHI*ALAGPGSLQDVPSR
Trigger: CCTTGATGGGACATCCTGGAGGGACCCGGGCCCTGCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCTGCGATCTGCACAGATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS GCA 90 bp GTCCTGAGAGGAAGACCGTGCAGGCGGGCTACGTTCAGCCTGTGCTaGTCTGGTGTGTTTCCTCTGGTGACTGGAAAGGGTATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: VLRGRPCRRATFSLC*SGVFPLVTGKGMSP
Trigger: GGGAGACATACCCTTTCCAGTCACCAGAGGAAACACACCAGAGCAGCACAGGCTGAACGTAGCCCGCCTGCACGGTCTTCCTCTCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CCA 90 bp CCTCGAAGACTGGGCCTGAGCTGGATAGGCAGCATGCCACCTGCCTaGAGGCATCACTCCTGTTCAGGGACTAACCAGAAGAGTGCGAAC +
Preference number: 5 (lower is better)
Translates to: PRRLGLSWIGSMPPA*RHHSCSGTNQKSAN
Trigger: GTTCGCACTCTTCTGGTTAGTCCCTGAACAGGAGTGATGCCTCCAGGCAGGTGGCATGCTGCCTATCCAGCTCAGGCCCAGTCTTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000474600.1
ENST00000634579.1
ENST00000634815.1
ENST00000634915.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAGGCTGGAGAATCGCTaGAGCCTGGGAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPRLENR*SLGKWR
Trigger: CCTCCACTTTCCCAGGCTCAAGCGATTCTCCAGCCT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS GCA 90 bp CATCTGGGCAGCAGGAGTATCGGATTGCCCAGCCAGGAAGTCACGTaGTTCTATTTCATAGGGAGGCTCCAGGTGGTCCCCCAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: HLGSRSIGLPSQEVT*FYFIGRLQVVPQSR
Trigger: TCTGCTCTGGGGGACCACCTGGAGCCTCCCTATGAAATAGAAGCACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCTGCCCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000617032.1
ENST00000634579.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS GCA 90 bp GTCATCTCCTGTAGGAGCAGCAACTGGATTCCCCTTAGGCTGAGCTaGCTGCATGTTCAGGCCCCATGGCTCCCTTGCTTCCAACCAGGA +
Preference number: 5 (lower is better)
Translates to: VISCRSSNWIPLRLS*LHVQAPWLPCFQPG
Trigger: TCCTGGTTGGAAGCAAGGGAGCCATGGGGCCTGAACATGCAGGCAGCTCAGCCTAAGGGGAATCCAGTTGCTGCTCCTACAGGAGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS GCA 90 bp AGGATACCTGCTAAAGGGTCCGTGGCTCAGGGTCCCGTTCTCAGCTaGTCAGGTACCATGGGAAGAAAGGAAGGCTTCCCCTGCACTCCT +
Preference number: 5 (lower is better)
Translates to: RIPAKGSVAQGPVLS*SGTMGRKEGFPCTP
Trigger: AGGAGTGCAGGGGAAGCCTTCCTTTCTTCCCATGGTACCTGAGCAGCTGAGAACGGGACCCTGAGCCACGGACCCTTTAGCAGGTATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474600.1
ENST00000634815.1
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGCCGAGATCATGCCATaGCACTCCAGCCTTGCGAAA +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPAEIMP*HSSLAK
Trigger: TTTCGCAAGGCTGGAGTGCAATGGCATGATCTCGGC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATTTCACCTTCTCAGTaGAGGCCCTCCCTGACCAGA +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRISPSQ*RPSLTR
Trigger: TCTGGTCAGGGAGGGCCTCAACTGAGAAGGTGAAAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCACATTTCAGTCAGTCTaGGTCAGCAGGGGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPTFQSV*VSRGGA
Trigger: TGCCCCACCCCTGCTGACCAAGACTGACTGAAATGT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGGCAGCCCTGGACTTaGGAAGGCAGCACTGACGCC +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARQPWT*EGSTDA
Trigger: GGCGTCAGTGCTGCCTTCCAAAGTCCAGGGCTGCCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS GCA 90 bp TGTGTCCTGAGAGGAAGACCGTGCAGGCGGGCTACGTTCAGCCTGTaGTGCTCTGGTGTGTTTCCTCTGGTGACTGGAAAGGGTATGTCT +
Preference number: 5 (lower is better)
Translates to: CVLRGRPCRRATFSL*CSGVFPLVTGKGMS
Trigger: AGACATACCCTTTCCAGTCACCAGAGGAAACACACCAGAGCAGCACAGGCTGAACGTAGCCCGCCTGCACGGTCTTCCTCTCAGGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTGTCAGGGACCTGGTaGGTGTTACCTGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLSGTW*VLPGLP
Trigger: CGGGAGACCAGGTAACACCAACCAGGTCCCTGACAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTTCCCTCAGAAACACTaGTCGCAGGACATCCTGATG +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRFPQKH*SQDILM
Trigger: CATCAGGATGTCCTGCGACAAGTGTTTCTGAGGGAA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTGCCTGCTCTTCTGTaGAAAAGATTCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLPALL*KRFSEP
Trigger: GGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAAGACTCTGCCCACGTaGGTGATGAGAGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPKTLPT*VMRAKA
Trigger: AGCCTTAGCTCTCATCACCAACGTGGGCAGAGTCTT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTCATGCCGCGCACAGTaGGAACTCCACCGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSCRAQ*ELHRKA
Trigger: AGCCTTCCGGTGGAGTTCCAACTGTGCGCGGCATGA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGGCCACAGGCCAAACTaGAAGACAAATCTAGGATCC +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRGHRPN*KTNLGS
Trigger: GGATCCTAGATTTGTCTTCAAGTTTGGCCTGTGGCC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGAGAGCTCAGTGCATTaGACAGTCAGGGTTTGCACA +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRESSVH*TVRVCT
Trigger: TGTGCAAACCCTGACTGTCAAATGCACTGAGCTCTC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCATTCAGGATCCTGCTTaGGCTGCACTGTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPIQDPA*AALSMA
Trigger: TGCCATGGACAGTGCAGCCAAAGCAGGATCCTGAAT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCAAGAGGTGGCCTTTaGACATCAGAGGGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPRGGL*TSEGQK
Trigger: TTTTTGGCCCTCTGATGTCAAAAGGCCACCTCTTGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCTCAGCAGGCCAGCTTaGCAACATCCTAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPLSRPA*QHPNKE
Trigger: CTCCTTGTTAGGATGTTGCAAAGCTGGCCTGCTGAG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS TCA 90 bp GGCGGGCTACGTTCAGCCTGTGCTGCTCTGGTGTGTTTCCTCTGGTaGCTGGAAAGGGTATGTCTCCCAATGAACTCTTTCCCACACCAC +
Preference number: 5 (lower is better)
Translates to: GGLRSACAALVCFLW*LERVCLPMNSFPHH
Trigger: GTGGTGTGGGAAAGAGTTCATTGGGAGACATACCCTTTCCAGTCACCAGAGGAAACACACCAGAGCAGCACAGGCTGAACGTAGCCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CCA 90 bp AAGGGTCCGTGGCTCAGGGTCCCGTTCTCAGCTGCTCAGGTACCATaGGAAGAAAGGAAGGCTTCCCCTGCACTCCTCTATATTGACAGT +
Preference number: 5 (lower is better)
Translates to: KGPWLRVPFSAAQVP*EERKASPALLYIDS
Trigger: ACTGTCAATATAGAGGAGTGCAGGGGAAGCCTTCCTTTCTTCCCATGGTACCTGAGCAGCTGAGAACGGGACCCTGAGCCACGGACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474600.1
ENST00000634815.1
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAAGCAGGAGTATCGGATaGCCCAGCCAGGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASRSIG*PSQEVT
Trigger: CGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCACACACGTCCTTTTaGTTCCCTTTCAGTCCACTA +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPHTSF*FPFSPL
Trigger: TAGTGGACTGAAAGGGAACAAAAAGGACGTGTGTGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAGGCAGAATGGTGACTaGCACACATCGTTCCAATAC +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRRQNGD*HTSFQY
Trigger: GTATTGGAACGATGTGTGCAAGTCACCATTCTGCCT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGAGAGCTCAGTGCATTaGACAGTCAGGGTTTGCACA +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPESSVH*TVRVCT
Trigger: TGTGCAAACCCTGACTGTCAAATGCACTGAGCTCTC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCTCTTTGTTCCTGCTTaGCACTTTGCTCCACATGAG +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRLFVPA*HFAPHE
Trigger: CTCATGTGGAGCAAAGTGCAAAGCAGGAACAAAGAG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTGGGGTTTCACCATATaGGCCAGGCTGGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMWGFTI*ARLAGL
Trigger: GAGACCAGCCAGCCTGGCCAATATGGTGAAACCCCA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCATTGCACTCCAGCCTaGCGAAAGAGCGAGACTCCA +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPHCTPA*RKSETP
Trigger: TGGAGTCTCGCTCTTTCGCAAGGCTGGAGTGCAATG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACATTGCACTCCAGCCTaGCGAAAGAGCGAGACTCCA +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAHCTPA*RKSETP
Trigger: TGGAGTCTCGCTCTTTCGCAAGGCTGGAGTGCAATG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTCTAGGATCTGTGCCTaGGAGAGAACGTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPSRICA*ERTSGL
Trigger: GAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAGA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCTAGGATCTGTGCCTaGGAGAGAACGTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASRICA*ERTSGL
Trigger: GAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTCTAGGATCTGTGCCTaGGAGAGAACGTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPSRICA*ERTSGL
Trigger: GAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAGA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGAGATCAGAGCAGGTTaGGTGAATGGTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPEIRAG*VNGPTR
Trigger: CCTGGTGGGACCATTCACCAAACCTGCTCTGATCTC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGAGATCAGAGCAGGTTaGGTGAATGGTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPEIRAG*VNGPTR
Trigger: CCTGGTGGGACCATTCACCAAACCTGCTCTGATCTC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTGGCTGCAAGCTTCTTaGCAGTCTTCGAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPWLQAS*QSSRGI
Trigger: GATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCCA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCACACGCCAAGCGCTaGAGCCCAGCATCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARPHAKR*SPASCS
Trigger: AGAGCAGGATGCTGGGCTCAAGCGCTTGGCGTGTGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCTTTTACTGAGTCCTaGGATCTGTGGTTAACCCTT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPFTES*DLWLTL
Trigger: AAGGGTTAACCACAGATCCAAGGACTCAGTAAAAGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACC +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPTCSFG*NLIAST
Trigger: GGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTGGCTTCCAGAGTGCTaGGTCTGGCTATGGAGATGG +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMWLPEC*VWLWRW
Trigger: CCATCTCCATAGCCAGACCAAGCACTCTGGAAGCCA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTGGCTTCCAGAGTGCTaGGTCTGGCTATGGAGATGG +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPWLPEC*VWLWRW
Trigger: CCATCTCCATAGCCAGACCAAGCACTCTGGAAGCCA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACATTTCAGTCAGTCTaGGTCAGCAGGGGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATFQSV*VSRGGA
Trigger: TGCCCCACCCCTGCTGACCAAGACTGACTGAAATGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGCCCAAGGGCTGCTGGTaGCCTATTTTTATGGTTATT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRPKGCW*PIFMVI
Trigger: AATAACCATAAAAATAGGCAACCAGCAGCCCTTGGG...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTCTAGCCACGTCTCTTaGTTCCTGCTTTGCACTTTG +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSSHVS*FLLCTL
Trigger: CAAAGTGCAAAGCAGGAACAAAGAGACGTGGCTAGA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGTCAGTCAAGTGTCCTaGCCTTTTATTAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPVSQVS*PFIKRG
Trigger: GCCCCTCTTAATAAAAGGCAAGGACACTTGACTGAC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGATTCTCATCACCGTCTaGGTTTTGGTGGGTTTTAGC +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRILITV*VLVGFS
Trigger: GCTAAAACCCACCAAAACCAAGACGGTGATGAGAAT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS CCA 90 bp ATATTCCTCTGGGAAGGTAGGAAAGGATACCTGCTAAAGGGTCCGTaGCTCAGGGTCCCGTTCTCAGCTGCTCAGGTACCATGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: IFLWEGRKGYLLKGP*LRVPFSAAQVPWEE
Trigger: TTCTTCCCATGGTACCTGAGCAGCTGAGAACGGGACCCTGAGCCACGGACCCTTTAGCAGGTATCCTTTCCTACCTTCCCAGAGGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474600.1
ENST00000634815.1
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAGCAGGAGTATCGGATaGCCCAGCCAGGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGSRSIG*PSQEVT
Trigger: CGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTGTCAGGGACCTGGTaGGTGTTACCTGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALSGTW*VLPGLP
Trigger: CGGGAGACCAGGTAACACCAACCAGGTCCCTGACAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCGTCACCTCCACATCCTaGAAAGTCATGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPVTSTS*KVMVSW
Trigger: CCAGGAGACCATGACTTTCAAGGATGTGGAGGTGAC...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGTCACCTCCACATCCTaGAAAGTCATGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPVTSTS*KVMVSW
Trigger: CCAGGAGACCATGACTTTCAAGGATGTGGAGGTGAC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAAGACTCTGCCCACGTaGGTGATGAGAGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPKTLPT*VMRAKA
Trigger: AGCCTTAGCTCTCATCACCAACGTGGGCAGAGTCTT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTCATGCCGCGCACAGTaGGAACTCCACCGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARSCRAQ*ELHRKA
Trigger: AGCCTTCCGGTGGAGTTCCAACTGTGCGCGGCATGA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCACTGCAGTCAGGAGATaGCCTGAAGCCTTCACGACA +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPTAVRR*PEAFTT
Trigger: TGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAGT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTCTGTAATCTCAACTTaGTGTCCTGAGAGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPSVIST*CPERKT
Trigger: GGTCTTCCTCTCAGGACACAAAGTTGAGATTACAGA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGACTTTCATTGCCATCTaGGTTTTGACCGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRTFIAI*VLTGFF
Trigger: AAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTATAAAGTGCATGTCTaGGTGACTGTGCGTCAGTAT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRYKVHV*VTVRQY
Trigger: ATACTGACGCACAGTCACCAAGACATGCACTTTATA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCAGGGTTTGCACAGTTaGAACTTCCCCTCTGACGCA +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMQGLHS*NFPSDA
Trigger: TGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCTG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACAGGGTTTGCACAGTTaGAACTTCCCCTCTGACGCA +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAQGLHS*NFPSDA
Trigger: TGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGGTCTCAGCCTCATTTaGTTACAGGAAAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPGLSLI*LQERGP
Trigger: GGGACCCCTTTCCTGTAACAAAATGAGGCTGAGACC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGTCTAGTGGCTTCTACTaGGCCTTTTCTACCAGAATT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRSSGFY*AFSTRI
Trigger: AATTCTGGTAGAAAAGGCCAAGTAGAAGCCACTAGA...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACATGTCTGGAGCAGTaGCTACTCCCTGTACACCAG +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATCLEQ*LLPVHQ
Trigger: CTGGTGTACAGGGAGTAGCAACTGCTCCAGACATGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGACATGTCTGGAGCAGTaGCTACTCCCTGTACACCAG +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMTCLEQ*LLPVHQ
Trigger: CTGGTGTACAGGGAGTAGCAACTGCTCCAGACATGT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTCAGCAGGCCAGCTTaGCAACATCCTAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLSRPA*QHPNKE
Trigger: CTCCTTGTTAGGATGTTGCAAAGCTGGCCTGCTGAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACGGAAGAATTCTCTCTaGCCTGAGAGAGAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLARKNSL*PERESG
Trigger: CCCAGACTCTCTCTCAGGCAAGAGAGAATTCTTCCG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS TCA 90 bp TGCATTTGTGGCACTTTTTCCCAATGCTTATGTCCTGGAGTCCAGTaGGCCTGGAGCTCTGGCTGCAAGCTTCTTTGCAGTCTTCGAGGG +
Preference number: 5 (lower is better)
Translates to: CICGTFSQCLCPGVQ*AWSSGCKLLCSLRG
Trigger: CCCTCGAAGACTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCACTGGACTCCAGGACATAAGCATTGGGAAAAAGTGCCACAAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGCCGAGATCATGCCATaGCACTCCAGCCTTGCGAAA +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGAEIMP*HSSLAK
Trigger: TTTCGCAAGGCTGGAGTGCAATGGCATGATCTCGGC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATCTAGGATCTGTGCCTaGGAGAGAACGTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGSRICA*ERTSGL
Trigger: GAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAGA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGCAGGAGTATCGGATaGCCCAGCCAGGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARSRSIG*PSQEVT
Trigger: CGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGAGATCAGAGCAGGTTaGGTGAATGGTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPEIRAG*VNGPTR
Trigger: CCTGGTGGGACCATTCACCAAACCTGCTCTGATCTC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTCCCTCAGAAACACTaGTCGCAGGACATCCTGATG +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPFPQKH*SQDILM
Trigger: CATCAGGATGTCCTGCGACAAGTGTTTCTGAGGGAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTGCCTGCTCTTCTGTaGAAAAGATTCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLPALL*KRFSEP
Trigger: GGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCATGCCGCGCACAGTaGGAACTCCACCGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISCRAQ*ELHRKA
Trigger: AGCCTTCCGGTGGAGTTCCAACTGTGCGCGGCATGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGATGGCTGCAAGCTTCTTaGCAGTCTTCGAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGWLQAS*QSSRGI
Trigger: GATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCCA...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMSRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGGGGGAGGGATAGCATaGGGAGATATACCTAATGCT +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAGGGIA*GDIPNA
Trigger: AGCATTAGGTATATCTCCCAATGCTATCCCTCCCCC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCAAGAGGTGGCCTTTaGACATCAGAGGGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPRGGL*TSEGQK
Trigger: TTTTTGGCCCTCTGATGTCAAAAGGCCACCTCTTGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATGCAGTGAGCCAAGATaGCCTCCACTCCAGCTCGAG +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGACSEPR*PPLQLE
Trigger: CTCGAGCTGGAGTGGAGGCAATCTTGGCTCACTGCA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS TCA 90 bp AGTTACTCCACAATGCCTATAATTAAGGGTTCTCTAGCAGGGGACTaGGAACCCACCCCCACTGTCACTGTCAGGTCCCAGGCTAATCTC +
Preference number: 5 (lower is better)
Translates to: SYSTMPIIKGSLAGD*EPTPTVTVRSQANL
Trigger: GAGATTAGCCTGGGACCTGACAGTGACAGTGGGGGTGGGTTCTCAGTCCCCTGCTAGAGAACCCTTAATTATAGGCATTGTGGAGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CCA 90 bp TTTTTCCCAATGCTTATGTCCTGGAGTCCAGTGAGCCTGGAGCTCTaGCTGCAAGCTTCTTTGCAGTCTTCGAGGGGCATCTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: FFPMLMSWSPVSLEL*LQASLQSSRGISSL
Trigger: AAGTGAAGAGATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCACTGGACTCCAGGACATAAGCATTGGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CCA 90 bp CCACATATGCTGCATTTGTGGCACTTTTTCCCAATGCTTATGTCCTaGAGTCCAGTGAGCCTGGAGCTCTGGCTGCAAGCTTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: PHMLHLWHFFPMLMS*SPVSLELWLQASLQ
Trigger: CTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCACTGGACTCCAGGACATAAGCATTGGGAAAAAGTGCCACAAATGCAGCATATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GGTGTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGCAGGAGTATCGGATaGCCCAGCCAGGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: GVSYHTQPPLIFTIIQNGSRSIG*PSQEVT
Trigger: CGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCT...GCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGTCACCTCCACATCCTaGAAAGTCATGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPVTSTS*KVMVSW
Trigger: CCAGGAGACCATGACTTTCAAGGATGTGGAGGTGAC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCCACACACGTCCTTTTaGTTCCCTTTCAGTCCACTA +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMPHTSF*FPFSPL
Trigger: TAGTGGACTGAAAGGGAACAAAAAGGACGTGTGTGG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCACACACGTCCTTTTaGTTCCCTTTCAGTCCACTA +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPHTSF*FPFSPL
Trigger: TAGTGGACTGAAAGGGAACAAAAAGGACGTGTGTGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAAGACTCTGCCCACGTaGGTGATGAGAGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPKTLPT*VMRAKA
Trigger: AGCCTTAGCTCTCATCACCAACGTGGGCAGAGTCTT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGAGTTTCTCCCCACTTaGGTCTCCCAAATGATGATC +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPEFLPT*VSQMMI
Trigger: GATCATCATTTGGGAGACCAAAGTGGGGAGAAACTC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTACTGCAGTCAGGAGATaGCCTGAAGCCTTCACGACA +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPTAVRR*PEAFTT
Trigger: TGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAGT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTGGCTGCAAGCTTCTTaGCAGTCTTCGAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARWLQAS*QSSRGI
Trigger: GATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCCA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACC +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTCSFG*NLIAST
Trigger: GGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCAAGACATCTTCCAGGTaGGTTTCTTCTCATTTCAAG +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPKTSSR*VSSHFK
Trigger: CTTGAAATGAGAAGAAACCAACCTGGAAGATGTCTT...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGACATTTCAGTCAGTCTaGGTCAGCAGGGGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARTFQSV*VSRGGA
Trigger: TGCCCCACCCCTGCTGACCAAGACTGACTGAAATGT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCAGGCAGAATGGTGACTaGCACACATCGTTCCAATAC +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPRQNGD*HTSFQY
Trigger: GTATTGGAACGATGTGTGCAAGTCACCATTCTGCCT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCCAAGAGAGAGTTCTaGGACCTTGCTCAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPKREF*DLAQEK
Trigger: CTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCCAAGAGAGAGTTCTaGGACCTTGCTCAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPKREF*DLAQEK
Trigger: CTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACAGGGTTTGCACAGTTaGAACTTCCCCTCTGACGCA +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGQGLHS*NFPSDA
Trigger: TGCGTCAGAGGGGAAGTTCAAACTGTGCAAACCCTG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTTGACAGTCAGGGTTaGCACAGTTTGAACTTCCCC +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAFDSQG*HSLNFP
Trigger: GGGGAAGTTCAAACTGTGCAAACCCTGACTGTCAAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTTGACAGTCAGGGTTaGCACAGTTTGAACTTCCCC +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPFDSQG*HSLNFP
Trigger: GGGGAAGTTCAAACTGTGCAAACCCTGACTGTCAAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAACGTCAGCGGACTTTaGGAAGACATATACCTCAGG +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMNVSGL*EDIYLR
Trigger: CCTGAGGTATATGTCTTCCAAAAGTCCGCTGACGTT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTGGGGTTTCACCATATaGGCCAGGCTGGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIWGFTI*ARLAGL
Trigger: GAGACCAGCCAGCCTGGCCAATATGGTGAAACCCCA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAGGTCTCAGCCTCATTTaGTTACAGGAAAGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGGLSLI*LQERGP
Trigger: GGGACCCCTTTCCTGTAACAAAATGAGGCTGAGACC...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTTGTGGCCTGGATCTaGTGCCAATCTCCTATCTCA +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPFVAWI*CQSPIS
Trigger: TGAGATAGGAGATTGGCACAAGATCCAGGCCACAAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCATCACCGTCTTGGTTTaGGTGGGTTTTAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPITVLV*VGFSWL
Trigger: AAGCCAGCTAAAACCCACCAAAACCAAGACGGTGAT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCCGAGGGCTGCTGGTaGTCTATTTTATGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPEGCW*SILWFL
Trigger: AAGAAACCATAAAATAGACAACCAGCAGCCCTCGGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTATTCAGGATCCTGCTTaGGCTGCACTGTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPIQDPA*AALSMA
Trigger: TGCCATGGACAGTGCAGCCAAAGCAGGATCCTGAAT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGAAAAAGTATAAATTATaGTCAGTGCAGCAGGGTCCT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGRKKYKL*SVQQGP
Trigger: AGGACCCTGCTGCACTGACAATAATTTATACTTTTT...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GGCTCCAAAGGACATGGTGCTGCACTTCCCCAGCGTCACATCCTAGCAGGCAGGGAAAAGTCTAATTATTaGCCCTTCCCAATGCACAAT +
Preference number: 5 (lower is better)
Translates to: GSKGHGAALPQRHILAGREKSNY*PFPMHN
Trigger: ATTGTGCATTGGGAAGGGCAAATAATTAGACTTTTC...CCTGCCTGCTAGGATGTGACGCTGGGGAAGTGCAGCACCATGTCCTTTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATCCAGTTCAAACCAGTaGAGACTGCCAACCCTTCAA +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLASSSNQ*RLPTLQ
Trigger: TTGAAGGGTTGGCAGTCTCAACTGGTTTGAACTGGA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTGCAGTGAGCCAAGATaGCCTCCACTCCAGCTCGAG +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWCSEPR*PPLQLE
Trigger: CTCGAGCTGGAGTGGAGGCAATCTTGGCTCACTGCA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGGAAGCAGCTTCACTaGTACCCAGGAGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGARKQLH*YPGGAG
Trigger: ACCTGCACCTCCTGGGTACAAGTGAAGCTGCTTCCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCGATGTGGACATTTTGTaGAGGAAAGAAATAGGACAG +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPDVDIL*RKEIGQ
Trigger: CTGTCCTATTTCTTTCCTCAACAAAATGTCCACATC...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCCACCATGCCCAGCCCTaGAAATTTAAATTTCAATGT +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPHHAQP*KFKFQC
Trigger: ACATTGAAATTTAAATTTCAAGGGCTGGGCATGGTG...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACAACAATGCCAACATTaGCTGGGACATCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAQQCQH*LGHQKS
Trigger: TGACTTCTGATGTCCCAGCAAATGTTGGCATTGTTG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GTGAGCTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGTCTAGGATCTGTGCCTaGGAGAGAACGTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: VSYHTQPPLIFTIIQNGRSRICA*ERTSGL
Trigger: GAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAGA...CCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp CAGCAGTTACAGAGCCAGGATCTAAAACCAGGTCAGGTACCTTTCTATGCAGCAGTCACCTCCACATCCTaGAAAGTCATGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QQLQSQDLKPGQVPFYAAVTSTS*KVMVSW
Trigger: CCAGGAGACCATGACTTTCAAGGATGTGGAGGTGAC...TGCTGCATAGAAAGGTACCTGACCTGGTTTTAGATCCTGGCTCTGTAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGTCACCTCCACATCCTaGAAAGTCATGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARVTSTS*KVMVSW
Trigger: CCAGGAGACCATGACTTTCAAGGATGTGGAGGTGAC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCTCATTCTGAAGTGTTaGCCACAGCCATGTTTAAGG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPLILKC*PQPCLR
Trigger: CCTTAAACATGGCTGTGGCAAACACTTCAGAATGAG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGACTGCAGTCAGGAGATaGCCTGAAGCCTTCACGACA +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARTAVRR*PEAFTT
Trigger: TGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAGT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAACTGCAGTCAGGAGATaGCCTGAAGCCTTCACGACA +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGATAVRR*PEAFTT
Trigger: TGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAGT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTGGCTGCAAGCTTCTTaGCAGTCTTCGAGGGGCATC +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIWLQAS*QSSRGI
Trigger: GATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCCA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCACATATGCTGCATTaGTGGCACTTTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPHMLH*WHFFPM
Trigger: CATTGGGAAAAAGTGCCACAAATGCAGCATATGTGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AGCCCAGCAGTCCACTCCTCCACCATAGGTCTGAGTTCAGCTCCACAAGGTCCCTACTGCGTATCCCATTaGTTTGTCATCTGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: SPAVHSSTIGLSSAPQGPYCVSH*FVICKD
Trigger: ATCTTTACAGATGACAAACAAATGGGATACGCAGTA...GGGACCTTGTGGAGCTGAACTCAGACCTATGGTGGAGGAGTGGACTGCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCTTTTACTGAGTCCTaGGATCTGTGGTTAACCCTT +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPFTES*DLWLTL
Trigger: AAGGGTTAACCACAGATCCAAGGACTCAGTAAAAGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCACATTTCAGTCAGTCTaGGTCAGCAGGGGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAITFQSV*VSRGGA
Trigger: TGCCCCACCCCTGCTGACCAAGACTGACTGAAATGT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGAGAGTTCTTGGACCTaGCTCAAGAAAAGAATTCGG +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPESSWT*LKKRIR
Trigger: CCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCTC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATACCTCCAAGACACCTaGGCATTTTCTTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAYLQDT*AFSSCL
Trigger: AAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGTA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGAGAGCTCAGTGCATTaGACAGTCAGGGTTTGCACA +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPESSVH*TVRVCT
Trigger: TGTGCAAACCCTGACTGTCAAATGCACTGAGCTCTC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTATTCTCATCACCGTCTaGGTTTTGGTGGGTTTTAGC +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPILITV*VLVGFS
Trigger: GCTAAAACCCACCAAAACCAAGACGGTGATGAGAAT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTATTTTTCAGGAACTaGGGGCAGATCCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPLFFRN*GQILSS
Trigger: ACTGGACAGGATCTGCCCCAAGTTCCTGAAAAATAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAGGAAGCAGCTTCACTaGTACCCAGGAGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWRKQLH*YPGGAG
Trigger: ACCTGCACCTCCTGGGTACAAGTGAAGCTGCTTCCT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGGCAGCCCTGGACTTaGGAAGGCAGCACTGACGCC +
Preference number: 5 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPRQPWT*EGSTDA
Trigger: GGCGTCAGTGCTGCCTTCCAAAGTCCAGGGCTGCCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTGTGGCTCAGCCAAGTaGACACCTAAAATTTACCCT +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPCGSAK*TPKIYP
Trigger: AGGGTAAATTTTAGGTGTCAACTTGGCTGAGCCACA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTGTGGCTCAGCCAAGTaGACACCTAAAATTTACCCT +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPCGSAK*TPKIYP
Trigger: AGGGTAAATTTTAGGTGTCAACTTGGCTGAGCCACA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS TCA 90 bp TCAACAATGCCAACATTTGCTGGGACATCAGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTTCGACTCCCGCCGCCGAGCGACAAT +
Preference number: 5 (lower is better)
Translates to: STMPTFAGTSEVISK*LKLPAFRLPPPSDN
Trigger: ATTGTCGCTCGGCGGCGGGAGTCGAAATGCTGGTAATTTCAGTCACTTGCTGATGACTTCTGATGTCCCAGCAAATGTTGGCATTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474600.1
ENST00000634815.1
CDS-3UTR CAA 90 bp CTACCACACCCAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTAAGCAGGAGTATCGGATaGCCCAGCCAGGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: LPHPATFNLYNNPEWQALSRSIG*PSQEVT
Trigger: CGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCT...TAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTGGGTGTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCACTGTCAGGGACCTGGTaGGTGTTACCTGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPLSGTW*VLPGLP
Trigger: CGGGAGACCAGGTAACACCAACCAGGTCCCTGACAG...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATCTGTCAGGGACCTGGTaGGTGTTACCTGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHLSGTW*VLPGLP
Trigger: CGGGAGACCAGGTAACACCAACCAGGTCCCTGACAG...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp TCTAAAACCAGGTCAGGTACCTTTCTATGCAGCACAGAACAACCCAAGAAGGCAGTCACCTCCACATCCTaGAAAGTCATGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SKTRSGTFLCSTEQPKKAVTSTS*KVMVSW
Trigger: CCAGGAGACCATGACTTTCAAGGATGTGGAGGTGAC...TGCCTTCTTGGGTTGTTCTGTGCTGCATAGAAAGGTACCTGACCTGGTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTGCCTGCTCTTCTGTaGAAAAGATTCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARLPALL*KRFSEP
Trigger: GGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCAG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTGCCTGCTCTTCTGTaGAAAAGATTCTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALPALL*KRFSEP
Trigger: GGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTATGGGATTTTCACATaGATCCTTCTGCCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPYGIFT*ILLPAL
Trigger: AAGAGCAGGCAGAAGGATCAATGTGAAAATCCCATA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTATGGGATTTTCACATaGATCCTTCTGCCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPYGIFT*ILLPAL
Trigger: AAGAGCAGGCAGAAGGATCAATGTGAAAATCCCATA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTGAGTTTCTCCCCACTTaGGTCTCCCAAATGATGATC +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPEFLPT*VSQMMI
Trigger: GATCATCATTTGGGAGACCAAAGTGGGGAGAAACTC...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTACTTGTTCCTTCGGGTaGAATCTGATTGCTAGCACC +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPTCSFG*NLIAST
Trigger: GGTGCTAGCAATCAGATTCAACCCGAAGGAACAAGT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTAGGCAGAATGGTGACTaGCACACATCGTTCCAATAC +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPRQNGD*HTSFQY
Trigger: GTATTGGAACGATGTGTGCAAGTCACCATTCTGCCT...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTACTTTCATTGCCATCTaGGTTTTGACCGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPTFIAI*VLTGFF
Trigger: AAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGT...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCACTTTCATTGCCATCTaGGTTTTGACCGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPTFIAI*VLTGFF
Trigger: AAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGT...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCCAAGAGAGAGTTCTaGGACCTTGCTCAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPKREF*DLAQEK
Trigger: CTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTTCCTGCTTTGCACTTaGCTCCACATGAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARFLLCT*LHMRWD
Trigger: ATCCCACCTCATGTGGAGCAAAGTGCAAAGCAGGAA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAAACGTCAGCGGACTTTaGGAAGACATATACCTCAGG +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGNVSGL*EDIYLR
Trigger: CCTGAGGTATATGTCTTCCAAAAGTCCGCTGACGTT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGAATCACCGTCTTGGTTTaGGTGGGTTTTAGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGITVLV*VGFSWL
Trigger: AAGCCAGCTAAAACCCACCAAAACCAAGACGGTGAT...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCCGAGGGCTGCTGGTaGTCTATTTTATGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPEGCW*SILWFL
Trigger: AAGAAACCATAAAATAGACAACCAGCAGCCCTCGGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGCCCGCTTGCTTTTGGTaGCTTGCTCTTTGTTATTTT +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMPACFW*LALCYF
Trigger: AAAATAACAAAGAGCAAGCAACCAAAAGCAAGCGGG...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCGGAAGAATTCTCTCTaGCCTGAGAGAGAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLRKNSL*PERESG
Trigger: CCCAGACTCTCTCTCAGGCAAGAGAGAATTCTTCCG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTTCTGTCAGGGACCTGGTaGGTGTTACCTGGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: ATFNLYNNPEWQALFSPFLSGTW*VLPGLP
Trigger: CGGGAGACCAGGTAACACCAACCAGGTCCCTGACAG...AAATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTCCCTCAGAAACACTaGTCGCAGGACATCCTGATG +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWFPQKH*SQDILM
Trigger: CATCAGGATGTCCTGCGACAAGTGTTTCTGAGGGAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTCCCTCAGAAACACTaGTCGCAGGACATCCTGATG +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIFPQKH*SQDILM
Trigger: CATCAGGATGTCCTGCGACAAGTGTTTCTGAGGGAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTCTGTAATCTCAACTTaGTGTCCTGAGAGGAAGACC +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPSVIST*CPERKT
Trigger: GGTCTTCCTCTCAGGACACAAAGTTGAGATTACAGA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGCCACAGGCCAAACTaGAAGACAAATCTAGGATCC +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWGHRPN*KTNLGS
Trigger: GGATCCTAGATTTGTCTTCAAGTTTGGCCTGTGGCC...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAGCGTATCCCATTTGTTaGTCATCTGTAAAGATCCAA +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAAYPIC*SSVKIQ
Trigger: TTGGATCTTTACAGATGACAAACAAATGGGATACGC...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTGCGTATCCCATTTGTTaGTCATCTGTAAAGATCCAA +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPAYPIC*SSVKIQ
Trigger: TTGGATCTTTACAGATGACAAACAAATGGGATACGC...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGGCGTATCCCATTTGTTaGTCATCTGTAAAGATCCAA +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMAYPIC*SSVKIQ
Trigger: TTGGATCTTTACAGATGACAAACAAATGGGATACGC...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCTTTTACTGAGTCCTaGGATCTGTGGTTAACCCTT +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPFTES*DLWLTL
Trigger: AAGGGTTAACCACAGATCCAAGGACTCAGTAAAAGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAGCAGGCACATGCACTaGTTCCTTCGGGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISRHMH*FLRVES
Trigger: AGATTCAACCCGAAGGAACAAGTGCATGTGCCTGCT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGAAGACATCTTCCAGGTaGGTTTCTTCTCATTTCAAG +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMKTSSR*VSSHFK
Trigger: CTTGAAATGAGAAGAAACCAACCTGGAAGATGTCTT...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAATAATTTCTGTTCTTTaGGCCGGGCACAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAIISVL*AGHSGS
Trigger: TGAGCCACTGTGCCCGGCCAAAAGAACAGAAATTAT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCACCAAGATTTTGCAAATaGCCTGGCACAATATTTCTC +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAPRFCK*PGTIFL
Trigger: GAGAAATATTGTGCCAGGCAATTTGCAAAATCTTGG...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTCCAAGATTTTGCAAATaGCCTGGCACAATATTTCTC +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPPRFCK*PGTIFL
Trigger: GAGAAATATTGTGCCAGGCAATTTGCAAAATCTTGG...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCCCAAGATTTTGCAAATaGCCTGGCACAATATTTCTC +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPPRFCK*PGTIFL
Trigger: GAGAAATATTGTGCCAGGCAATTTGCAAAATCTTGG...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAGGCAGAATGGTGACTaGCACACATCGTTCCAATAC +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARRQNGD*HTSFQY
Trigger: GTATTGGAACGATGTGTGCAAGTCACCATTCTGCCT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTCCCAAGGGCTGCTGGTaGCCTATTTTTATGGTTATT +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPPKGCW*PIFMVI
Trigger: AATAACCATAAAAATAGGCAACCAGCAGCCCTTGGG...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCCAAGAGAGAGTTCTaGGACCTTGCTCAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPKREF*DLAQEK
Trigger: CTTTTCTTGAGCAAGGTCCAAGAACTCTCTCTTGGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTACCTCCAAGACACCTaGGCATTTTCTTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPYLQDT*AFSSCL
Trigger: AAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGTA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATCTAGCCACGTCTCTTaGTTCCTGCTTTGCACTTTG +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGASSHVS*FLLCTL
Trigger: CAAAGTGCAAAGCAGGAACAAAGAGACGTGGCTAGA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAAGGCTGGAGAATCGCTaGAGCCTGGGAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPRLENR*SLGKWR
Trigger: CCTCCACTTTCCCAGGCTCAAGCGATTCTCCAGCCT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGGGGGAGGGATAGCATaGGGAGATATACCTAATGCT +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIGGGIA*GDIPNA
Trigger: AGCATTAGGTATATCTCCCAATGCTATCCCTCCCCC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCAACTCATAGGTGGGAATaGAACAATGAGAAAACATGG +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLATHRWE*NNEKTW
Trigger: CCATGTTTTCTCATTGTTCAATTCCCACCTATGAGT...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGCCAAGAAAAGGCACACCATGCCTGGAACCCAGATCTGATGACTCCAAGACCCTTTTGGAAACATTATTaGCCCTTAGCCATGTTGTGG +
Preference number: 5 (lower is better)
Translates to: CQEKAHHAWNPDLMTPRPFWKHY*PLAMLW
Trigger: CCACAACATGGCTAAGGGCAAATAATGTTTCCAAAA...GGGTCTTGGAGTCATCAGATCTGGGTTCCAGGCATGGTGTGCCTTTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGATCTCTGTGGGTCAGACCATTCAGGATCCTGCTTTGGCTGCACTGTCCATGTTTTGGAAACATTATTaGCCCTTAGCCATGTTGTGG +
Preference number: 5 (lower is better)
Translates to: QISVGQTIQDPALAALSMFWKHY*PLAMLW
Trigger: CCACAACATGGCTAAGGGCAAATAATGTTTCCAAAA...CATGGACAGTGCAGCCAAAGCAGGATCCTGAATGGTCTGACCCACAGAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGCCACCTTTAATCTTTACAATAATCCAGAATGGCAGGCATTATTCTCCCCATTCTAGGATCTGTGCCTaGGAGAGAACGTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: QPPLIFTIIQNGRHYSPHSRICA*ERTSGL
Trigger: GAGGCCTGACGTTCTCTCCAAGGCACAGATCCTAGA...ATGGGGAGAATAATGCCTGCCATTCTGGATTATTGTAAAGATTAAAGGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTATGGGATTTTCACATaGATCCTTCTGCCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPYGIFT*ILLPAL
Trigger: AAGAGCAGGCAGAAGGATCAATGTGAAAATCCCATA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACTCATTCTGAAGTGTTaGCCACAGCCATGTTTAAGG +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGALILKC*PQPCLR
Trigger: CCTTAAACATGGCTGTGGCAAACACTTCAGAATGAG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCTCATTCTGAAGTGTTaGCCACAGCCATGTTTAAGG +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARLILKC*PQPCLR
Trigger: CCTTAAACATGGCTGTGGCAAACACTTCAGAATGAG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCACACACGTCCTTTTaGTTCCCTTTCAGTCCACTA +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPHTSF*FPFSPL
Trigger: TAGTGGACTGAAAGGGAACAAAAAGGACGTGTGTGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGAGTTTCTCCCCACTTaGGTCTCCCAAATGATGATC +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIEFLPT*VSQMMI
Trigger: GATCATCATTTGGGAGACCAAAGTGGGGAGAAACTC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGCCACATATGCTGCATTaGTGGCACTTTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARPHMLH*WHFFPM
Trigger: CATTGGGAAAAAGTGCCACAAATGCAGCATATGTGG...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCACCACATATGCTGCATTaGTGGCACTTTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAPHMLH*WHFFPM
Trigger: CATTGGGAAAAAGTGCCACAAATGCAGCATATGTGG...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGATAATTTCTGTTCTTTaGGCCGGGCACAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWIISVL*AGHSGS
Trigger: TGAGCCACTGTGCCCGGCCAAAAGAACAGAAATTAT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGAGAGTTCTTGGACCTaGCTCAAGAAAAGAATTCGG +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARESSWT*LKKRIR
Trigger: CCGAATTCTTTTCTTGAGCAAGGTCCAAGAACTCTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp CAGAAACTGTCAACTGAAGCCAAACAGCTCAGAACCACCCACAGCCGGGTTCCTTTTACTAATAGCCATTaGTATTGCTCCTGTTACCAG +
Preference number: 5 (lower is better)
Translates to: QKLSTEAKQLRTTHSRVPFTNSH*YCSCYQ
Trigger: CTGGTAACAGGAGCAATACAAATGGCTATTAGTAAA...AGGAACCCGGCTGTGGGTGGTTCTGAGCTGTTTGGCTTCAGTTGACAGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp GCCTGCCATGGCGTTTGTAAACTGTCATGGCACTGGTGGGAGTGTCTGTTAGCATTTACTAATAGCCATTaGTATTGCTCCTGTTACCAG +
Preference number: 5 (lower is better)
Translates to: ACHGVCKLSWHWWECLLAFTNSH*YCSCYQ
Trigger: CTGGTAACAGGAGCAATACAAATGGCTATTAGTAAA...TGCTAACAGACACTCCCACCAGTGCCATGACAGTTTACAAACGCCATGGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTACCTCCAAGACACCTaGGCATTTTCTTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARYLQDT*AFSSCL
Trigger: AAGGCAAGAAGAAAATGCCAAGGTGTCTTGGAGGTA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTTGACAGTCAGGGTTaGCACAGTTTGAACTTCCCC +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIFDSQG*HSLNFP
Trigger: GGGGAAGTTCAAACTGTGCAAACCCTGACTGTCAAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGTCAGTCAAGTGTCCTaGCCTTTTATTAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLVSQVS*PFIKRG
Trigger: GCCCCTCTTAATAAAAGGCAAGGACACTTGACTGAC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTCCAGTTCAAACCAGTaGAGACTGCCAACCCTTCAA +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLSSSNQ*RLPTLQ
Trigger: TTGAAGGGTTGGCAGTCTCAACTGGTTTGAACTGGA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp CTTAACCGTCTGGGAATGCAGCCCAGTAGGTCTCAGCCTCATTTTGTTACAGGACCCGCTTGCTTTTGGTaGCTTGCTCTTTGTTATTTT +
Preference number: 5 (lower is better)
Translates to: LNRLGMQPSRSQPHFVTGPACFW*LALCYF
Trigger: AAAATAACAAAGAGCAAGCAACCAAAAGCAAGCGGG...TCCTGTAACAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS TCA 90 bp TTTCACATTGATCCTTCTGCCTGCTCTTCTGTTGAAAAGATTCTCTaGGCCCAATTCCCTCAGAAACACTTGTCGCAGGACATCCTGATG +
Preference number: 5 (lower is better)
Translates to: FHIDPSACSSVEKIL*AQFPQKHLSQDILM
Trigger: CATCAGGATGTCCTGCGACAAGTGTTTCTGAGGGAATTGGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAATGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS GCA 90 bp TGGGTCCTCAGAAGTATCTTCTCAGCAGTCAACAATGCCAACATTTaGTGGGACATCAGAAGTCATCAGCAAGTGACTGAAATTACCAGC +
Preference number: 5 (lower is better)
Translates to: WVLRSIFSAVNNANI*WDIRSHQQVTEITS
Trigger: GCTGGTAATTTCAGTCACTTGCTGATGACTTCTGATGTCCCAGCAAATGTTGGCATTGTTGACTGCTGAGAAGATACTTCTGAGGACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000474600.1
ENST00000617032.1
ENST00000634579.1
ENST00000634815.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTCTGTAATCTCAACTTaGTGTCCTGAGAGGAAGACC +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAISVIST*CPERKT
Trigger: GGTCTTCCTCTCAGGACACAAAGTTGAGATTACAGA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCCCACATATGCTGCATTaGTGGCACTTTTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIPHMLH*WHFFPM
Trigger: CATTGGGAAAAAGTGCCACAAATGCAGCATATGTGG...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATACACTAAGGGTACCTaGTATGTAGCTTCACCAACT +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAYTKGT*YVASPT
Trigger: AGTTGGTGAAGCTACATACAAGGTACCCTTAGTGTA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGCCCAAGGGCTGCTGGTaGCCTATTTTTATGGTTATT +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLPKGCW*PIFMVI
Trigger: AATAACCATAAAAATAGGCAACCAGCAGCCCTTGGG...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATATAAAGTGCATGTCTaGGTGACTGTGCGTCAGTAT +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAYKVHV*VTVRQY
Trigger: ATACTGACGCACAGTCACCAAGACATGCACTTTATA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTATAAAGTGCATGTCTaGGTGACTGTGCGTCAGTAT +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARYKVHV*VTVRQY
Trigger: ATACTGACGCACAGTCACCAAGACATGCACTTTATA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTTATTTTTCAGGAACTaGGGGCAGATCCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLLFFRN*GQILSS
Trigger: ACTGGACAGGATCTGCCCCAAGTTCCTGAAAAATAA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGAACCCATGGATTCCTTaGTGTCTGCTTCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARNPWIP*CLLPFH
Trigger: ATGAAAAGGAAGCAGACACAAAGGAATCCATGGGTT...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS TCA 90 bp CATGTGTCTGAGCCCCTTCCCATATTTCTTGTAGTCATAGTGGTGTaGACTCATTCTGAAGTGTTTGCCACAGCCATGTTTAAGGGATTC +
Preference number: 5 (lower is better)
Translates to: HVSEPLPIFLVVIVV*THSEVFATAMFKGF
Trigger: GAATCCCTTAAACATGGCTGTGGCAAACACTTCAGAATGAGTTCACACCACTATGACTACAAGAAATATGGGAAGGGGCTCAGACACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCAAAGACATCTTCCAGGTaGGTTTCTTCTCATTTCAAG +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAKTSSR*VSSHFK
Trigger: CTTGAAATGAGAAGAAACCAACCTGGAAGATGTCTT...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTACACTAAGGGTACCTaGTATGTAGCTTCACCAACT +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIYTKGT*YVASPT
Trigger: AGTTGGTGAAGCTACATACAAGGTACCCTTAGTGTA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGTACACTAAGGGTACCTaGTATGTAGCTTCACCAACT +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLYTKGT*YVASPT
Trigger: AGTTGGTGAAGCTACATACAAGGTACCCTTAGTGTA...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TTGATTCTTGCTTTTTGCTTCAACACAAGTGGGTGGGCCAGTGAGGGAGCTCCTTTTACTAATAGCCATTaGTATTGCTCCTGTTACCAG +
Preference number: 5 (lower is better)
Translates to: LILAFCFNTSGWASEGAPFTNSH*YCSCYQ
Trigger: CTGGTAACAGGAGCAATACAAATGGCTATTAGTAAA...AGGAGCTCCCTCACTGGCCCACCCACTTGTGTTGAAGCAAAAAGCAAGAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGATGTGGACATTTTGTaGAGGAAAGAAATAGGACAG +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARDVDIL*RKEIGQ
Trigger: CTGTCCTATTTCTTTCCTCAACAAAATGTCCACATC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGGAGGATGTGGACATTTaGTTGAGGAAAGAAATAGGA +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAAREDVDI*LRKEIG
Trigger: TCCTATTTCTTTCCTCAACAAAATGTCCACATCCTC...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGAACCCATGGATTCCTTaGTGTCTGCTTCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWNPWIP*CLLPFH
Trigger: ATGAAAAGGAAGCAGACACAAAGGAATCCATGGGTT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS TCA 90 bp AAAGAGTTTCTCCCCACTTTGGTCTCCCAAATGATGATCAAACCCTaGGCTGTAGGTGAGAGCTGCCCTATACTGATTCAATTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: KEFLPTLVSQMMIKP*AVGESCPILIQFKK
Trigger: TTTCTTGAATTGAATCAGTATAGGGCAGCTCTCACCTACAGCTCAGGGTTTGATCATCATTTGGGAGACCAAAGTGGGGAGAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp ATATCCCTATACTGGGGCAGGAACTTTACAAGGTATCCTGTGGCAAAGGGAGCATTTTTGGCTCCACATTaGGAGTCTTTTCACTTTCAT +
Preference number: 5 (lower is better)
Translates to: ISLYWGRNFTRYPVAKGAFLAPH*ESFHFH
Trigger: ATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAAA...TGCTCCCTTTGCCACAGGATACCTTGTAAAGTTCCTGCCCCAGTATAGGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp AAAATTCAGAAACGGAGTGGGGAGGAGTCTGATTTATGGGAACTGGCAGCAAGGTACTGCGTATCCCATTaGTTTGTCATCTGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: KIQKRSGEESDLWELAARYCVSH*FVICKD
Trigger: ATCTTTACAGATGACAAACAAATGGGATACGCAGTA...CCTTGCTGCCAGTTCCCATAAATCAGACTCCTCCCCACTCCGTTTCTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCAAGACATCTTCCAGGTaGGTTTCTTCTCATTTCAAG +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIKTSSR*VSSHFK
Trigger: CTTGAAATGAGAAGAAACCAACCTGGAAGATGTCTT...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGACTCATAGGTGGGAATaGAACAATGAGAAAACATGG +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWTHRWE*NNEKTW
Trigger: CCATGTTTTCTCATTGTTCAATTCCCACCTATGAGT...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATTTGTGGCCTGGATCTaGTGCCAATCTCCTATCTCA +
Preference number: 5 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPFVAWI*CQSPIS
Trigger: TGAGATAGGAGATTGGCACAAGATCCAGGCCACAAA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCGAGGATGTGGACATTTaGTTGAGGAAAGAAATAGGA +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIEDVDI*LRKEIG
Trigger: TCCTATTTCTTTCCTCAACAAAATGTCCACATCCTC...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGCACCATGCCCAGCCCTaGAAATTTAAATTTCAATGT +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWHHAQP*KFKFQC
Trigger: ACATTGAAATTTAAATTTCAAGGGCTGGGCATGGTG...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TGTGACACCACCACACAATATCAGAGCCTTCATTTTCACCTGCTCATGGCAATCTTTTTGGCTCCACATTaGGAGTCTTTTCACTTTCAT +
Preference number: 5 (lower is better)
Translates to: CDTTTQYQSLHFHLLMAIFLAPH*ESFHFH
Trigger: ATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAAA...GATTGCCATGAGCAGGTGAAAATGAAGGCTCTGATATTGTGTGGTGGTGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS-3UTR CAA 90 bp TACCCCATCACTTACCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGTTTTTGGCTCCACATTaGGAGTCTTTTCACTTTCAT +
Preference number: 5 (lower is better)
Translates to: YPITYPKSSNQCCSLFLWFLAPH*ESFHFH
Trigger: ATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAAA...CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGTAAGTGATGGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp TATTTGCCCTTCCCAATGCACAATCACTCTGATAAATGGCCTTGGGTGCCTTTGGCAAAATTATGCAATTaGGAGAGTACTGTATCTCCT +
Preference number: 5 (lower is better)
Translates to: YLPFPMHNHSDKWPWVPLAKLCN*ESTVSP
Trigger: AGGAGATACAGTACTCTCCAAATTGCATAATTTTGC...CAAAGGCACCCAAGGCCATTTATCAGAGTGATTGTGCATTGGGAAGGGCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAACTTTCATTGCCATCTaGGTTTTGACCGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPTFIAI*VLTGFF
Trigger: AAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGT...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCATTTACTAATAGCCATTaGTATTGCTCCTGTTACCAG +
Preference number: 5 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPFTNSH*YCSCYQ
Trigger: CTGGTAACAGGAGCAATACAAATGGCTATTAGTAAA...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS-3UTR CAA 90 bp GACAACTCAATGAAGTCTCAGAGAGCCATTCTAAGAACCCATGTTCTATTTCCAGCAAAATTATGCAATTaGGAGAGTACTGTATCTCCT +
Preference number: 5 (lower is better)
Translates to: DNSMKSQRAILRTHVLFPAKLCN*ESTVSP
Trigger: AGGAGATACAGTACTCTCCAAATTGCATAATTTTGC...TGGAAATAGAACATGGGTTCTTAGAATGGCTCTCTGAGACTTCATTGAGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396077.8
ENST00000635479.2
CDS GCA 72 bp ATCTGTGCAGATCGCAGGGCTCCTGTACCCATCCAATaGACATCTGGGCTCTGGGCAGGGCCCGGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: ICADRRAPVPIQ*TSGLWAGPGSL
Trigger: GAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCCTGCGATCTGCACAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000634579.1
ENST00000634915.1
ENST00000635479.2
CDS CCA 72 bp AGGGCTCCTGTACCCATCCAATGCACATCTGGGCTCTaGGCAGGGCCCGGGTCCCTCCAGGATGTCCCATCA +
Preference number: 6 (lower is better)
Translates to: RAPVPIQCTSGL*AGPGSLQDVPS
Trigger: TGATGGGACATCCTGGAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000634579.1
ENST00000634915.1
ENST00000635479.2
CDS CCA 72 bp TGGAGCTGGGCTGTCAGGGACCTGGTTGGTGTTACCTaGTCTCCCGGGCACCCCTCTCTCGGGAAAAGGGCA +
Preference number: 6 (lower is better)
Translates to: WSWAVRDLVGVT*SPGHPSLGKRA
Trigger: TGCCCTTTTCCCGAGAGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAGGTCCCTGACAGCCCAGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000617032.1
ENST00000634579.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS GCA 72 bp TATCTGTGCAGATCGCAGGCTCCTGTACCCATCCAATaGACATCTGGGCTCTGGCAGGGCCCGGGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: YLCRSQAPVPIQ*TSGLWQGPGPS
Trigger: GGAGGGACCCGGGCCCTGCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCTGCGATCTGCACAGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS CCA 72 bp AAGTCATGGTCTCCTGGAGCTGGGCTGTCAGGGACCTaGTTGGTGTTACCTGGTCTCCCGGGCACCCCTCTC +
Preference number: 6 (lower is better)
Translates to: KSWSPGAGLSGT*LVLPGLPGTPL
Trigger: GAGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCATGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000617032.1
ENST00000634579.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS CCA 72 bp CAGGCTCCTGTACCCATCCAATGCACATCTGGGCTCTaGCAGGGCCCGGGTCCCTCCAGGATGTCCCATCAA +
Preference number: 6 (lower is better)
Translates to: QAPVPIQCTSGL*QGPGPSRMSHQ
Trigger: TTGATGGGACATCCTGGAGGGACCCGGGCCCTGCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617032.1
ENST00000635138.1
CDS GCA 72 bp GGAAGACCGTGCAGGCGGGCTACGTTCAGCCTGTGCTaGTCTGGTGTGTTTCCTCTGGTGACTGGAAAGGGT +
Preference number: 6 (lower is better)
Translates to: GRPCRRATFSLC*SGVFPLVTGKG
Trigger: ACCCTTTCCAGTCACCAGAGGAAACACACCAGAGCAGCACAGGCTGAACGTAGCCCGCCTGCACGGTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS GCA 72 bp GCTAAAGGGTCCGTGGCTCAGGGTCCCGTTCTCAGCTaGTCAGGTACCATGGGAAGAAAGGAAGGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: AKGSVAQGPVLS*SGTMGRKEGFP
Trigger: GGGGAAGCCTTCCTTTCTTCCCATGGTACCTGAGCAGCTGAGAACGGGACCCTGAGCCACGGACCCTTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474600.1
ENST00000634815.1
CDS GCA 72 bp TGTAGGAGCAGCAACTGGATTCCCCTTAGGCTGAGCTaGCTGCATGTTCAGGCCCCATGGCTCCCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: CRSSNWIPLRLS*LHVQAPWLPCF
Trigger: GAAGCAAGGGAGCCATGGGGCCTGAACATGCAGGCAGCTCAGCCTAAGGGGAATCCAGTTGCTGCTCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS GCA 72 bp AGAGGAAGACCGTGCAGGCGGGCTACGTTCAGCCTGTaGTGCTCTGGTGTGTTTCCTCTGGTGACTGGAAAG +
Preference number: 6 (lower is better)
Translates to: RGRPCRRATFSL*CSGVFPLVTGK
Trigger: CTTTCCAGTCACCAGAGGAAACACACCAGAGCAGCACAGGCTGAACGTAGCCCGCCTGCACGGTCTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS GCA 72 bp AGCAGGAGTATCGGATTGCCCAGCCAGGAAGTCACGTaGTTCTATTTCATAGGGAGGCTCCAGGTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: SRSIGLPSQEVT*FYFIGRLQVVP
Trigger: GGGGACCACCTGGAGCCTCCCTATGAAATAGAAGCACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000617032.1
ENST00000634579.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS CCA 72 bp TGGGAAGGTAGGAAAGGATACCTGCTAAAGGGTCCGTaGCTCAGGGTCCCGTTCTCAGCTGCTCAGGTACCA +
Preference number: 6 (lower is better)
Translates to: WEGRKGYLLKGP*LRVPFSAAQVP
Trigger: TGGTACCTGAGCAGCTGAGAACGGGACCCTGAGCCACGGACCCTTTAGCAGGTATCCTTTCCTACCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474600.1
ENST00000634815.1
CDS TCA 72 bp AGAAATGTTTTCTCCACAGCGGGAGCACCCTGGGGCTaGCTGCAGTCAGGAGATTGCCTGAAGCCTTCACGA +
Preference number: 6 (lower is better)
Translates to: RNVFSTAGAPWG*LQSGDCLKPSR
Trigger: TCGTGAAGGCTTCAGGCAATCTCCTGACTGCAGTCAGCCCCAGGGTGCTCCCGCTGTGGAGAAAACATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CCA 72 bp ATGCTTATGTCCTGGAGTCCAGTGAGCCTGGAGCTCTaGCTGCAAGCTTCTTTGCAGTCTTCGAGGGGCATC +
Preference number: 6 (lower is better)
Translates to: MLMSWSPVSLEL*LQASLQSSRGI
Trigger: GATGCCCCTCGAAGACTGCAAAGAAGCTTGCAGCCAGAGCTCCAGGCTCACTGGACTCCAGGACATAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CCA 72 bp AGGGCGGTTGAGAGTCTGTGGCCTGGCAGCCTGCACTaGAGTATAGCTTTCATCCTCTTCTTCCTTCTTTAC +
Preference number: 6 (lower is better)
Translates to: RAVESLWPGSLH*SIAFILFFLLY
Trigger: GTAAAGAAGGAAGAAGAGGATGAAAGCTATACTCCAGTGCAGGCTGCCAGGCCACAGACTCTCAACCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000474600.1
ENST00000617032.1
ENST00000634579.1
ENST00000634815.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS CAA 90 bp CGAGGGGCATCTCTTCACTTGGTTTTAGCTTCTGTAATCTCAACTTaGTGTCCTGAGAGGAAGACCGTGCAGGCGGGCTACGTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: RGASLHLVLASVIST*CPERKTVQAGYVQP
Trigger: AGGCTGAACGTAGCCCGCCTGCACGGTCTTCCTCTCAGGACACAAAGTTGAGATTACAGAAGCTAAAACCAAGTGAAGAGATGCCCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS TCA 72 bp CGTTCAGCCTGTGCTGCTCTGGTGTGTTTCCTCTGGTaGCTGGAAAGGGTATGTCTCCCAATGAACTCTTTC +
Preference number: 6 (lower is better)
Translates to: RSACAALVCFLW*LERVCLPMNSF
Trigger: GAAAGAGTTCATTGGGAGACATACCCTTTCCAGTCACCAGAGGAAACACACCAGAGCAGCACAGGCTGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS TCA 72 bp CCAACATTTGCTGGGACATCAGAAGTCATCAGCAAGTaGCTGAAATTACCAGCATTTCGACTCCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: PTFAGTSEVISK*LKLPAFRLPPP
Trigger: CGGCGGCGGGAGTCGAAATGCTGGTAATTTCAGTCACTTGCTGATGACTTCTGATGTCCCAGCAAATGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474600.1
ENST00000634815.1
CDS TCA 72 bp GAGCACCCTGGGGCTGACTGCAGTCAGGAGATTGCCTaGAGCCTTCACGACATTCATCTTGTTTGTAGAATT +
Preference number: 6 (lower is better)
Translates to: EHPGADCSQEIA*SLHDIHLVCRI
Trigger: AATTCTACAAACAAGATGAATGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAGTCAGCCCCAGGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS TCA 72 bp CTCCCCACTTTGGTCTCCCAAATGATGATCAAACCCTaGGCTGTAGGTGAGAGCTGCCCTATACTGATTCAA +
Preference number: 6 (lower is better)
Translates to: LPTLVSQMMIKP*AVGESCPILIQ
Trigger: TTGAATCAGTATAGGGCAGCTCTCACCTACAGCTCAGGGTTTGATCATCATTTGGGAGACCAAAGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CAA 72 bp TCTCTTCACTTGGTTTTAGCTTCTGTAATCTCAACTTaGTGTCCTGAGAGGAAGACCGTGCAGGCGGGCTAC +
Preference number: 6 (lower is better)
Translates to: SLHLVLASVIST*CPERKTVQAGY
Trigger: GTAGCCCGCCTGCACGGTCTTCCTCTCAGGACACAAAGTTGAGATTACAGAAGCTAAAACCAAGTGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS TCA 72 bp GAGCCCCTTCCCATATTTCTTGTAGTCATAGTGGTGTaGACTCATTCTGAAGTGTTTGCCACAGCCATGTTT +
Preference number: 6 (lower is better)
Translates to: EPLPIFLVVIVV*THSEVFATAMF
Trigger: AAACATGGCTGTGGCAAACACTTCAGAATGAGTTCACACCACTATGACTACAAGAAATATGGGAAGGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CAA 72 bp GGGATTTTCACATTGATCCTTCTGCCTGCTCTTCTGTaGAAAAGATTCTCTGAGCCCAATTCCCTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: GIFTLILLPALL*KRFSEPNSLRN
Trigger: GTTTCTGAGGGAATTGGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAATGTGAAAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS CAA 90 bp TACTTGTATGGGATTTTCACATTGATCCTTCTGCCTGCTCTTCTGTaGAAAAGATTCTCTGAGCCCAATTCCCTCAGAAACACTTGTCGC +
Preference number: 6 (lower is better)
Translates to: YLYGIFTLILLPALL*KRFSEPNSLRNTCR
Trigger: GCGACAAGTGTTTCTGAGGGAATTGGGCTCAGAGAATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAATGTGAAAATCCCATACAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2
CDS GCA 72 bp AGAAGTATCTTCTCAGCAGTCAACAATGCCAACATTTaGTGGGACATCAGAAGTCATCAGCAAGTGACTGAA +
Preference number: 6 (lower is better)
Translates to: RSIFSAVNNANI*WDIRSHQQVTE
Trigger: TTCAGTCACTTGCTGATGACTTCTGATGTCCCAGCAAATGTTGGCATTGTTGACTGCTGAGAAGATACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000460529.1
ENST00000474600.1
ENST00000617032.1
ENST00000634579.1
ENST00000634815.1
ENST00000634915.1
ENST00000635138.1
ENST00000635479.2
CDS TCA 72 bp TTCCTCCTCATGCAACCTCATATGACGAGTAAAGTTTaGTCTCCATCTAAAGGTTTTCCTACATTTGGTACA +
Preference number: 6 (lower is better)
Translates to: FLLMQPHMTSKV*SPSKGFPTFGT
Trigger: TGTACCAAATGTAGGAAAACCTTTAGATGGAGATCAAACTTTACTCGTCATATGAGGTTGCATGAGGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396077.8
ENST00000425708.6
ENST00000634579.1
ENST00000635479.2