RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF318 (Homo sapiens)

Ensembl gene IDs: ENSG00000171467

Ensembl transcript IDs: ENST00000361428.3, ENST00000605935.5, ENST00000606599.1, ENST00000607252.5

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCCCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTaGTTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTC +
Preference number: 1 (lower is better)
Translates to: TPISHTHLLEVRSFR*LPTGHKGTHHFRGL
Trigger: GAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR GCA 90 bp CCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTGATTaGCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: PSVIPTFWKSDPSGD*LLATRAPIISVASV
Trigger: CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR CCA 90 bp CTTCTCTACAACTTATCCCCACCCCCATCAGTCATACCCACCTTCTaGAAGTCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCA +
Preference number: 1 (lower is better)
Translates to: LLYNLSPPPSVIPTF*KSDPSGDCLLATRA
Trigger: TGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGATAAGTTGTAGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR CCA 90 bp GCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTaGGTAGGAATACAACACAGCAACTGGAGAGGTCAGCTGCCTCCA +
Preference number: 1 (lower is better)
Translates to: AFWCFSQRCINCPGN*VGIQHSNWRGQLPP
Trigger: TGGAGGCAGCTGACCTCTCCAGTTGCTGTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR TCA 90 bp GAGGAGGTAGAGGAAAGGATACATATGGGTTTGTGGAACAGGGAATaGGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCA +
Preference number: 1 (lower is better)
Translates to: EEVEERIHMGLWNRE*VQSQDKFQRSSTPS
Trigger: TGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTTTCCTCTACCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR CAA 90 bp AGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATaGGGTAGGAATACAACACAGCAACTGGAGAGGTCAGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SFLVFFPEMHQLPRK*GRNTTQQLERSAAS
Trigger: GGAGGCAGCTGACCTCTCCAGTTGCTGTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR CCA 90 bp ACTCACCATTTCCTGGCAGCTAAAATGACAGGATCTTCTCTACAACTTATCCCCCAGGTGATTGCCTACTaGCCACAAGGGCACCCATCA +
Preference number: 2 (lower is better)
Translates to: THHFLAAKMTGSSLQLIPQVIAY*PQGHPS
Trigger: TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTG...GGGGATAAGTTGTAGAGAAGATCCTGTCATTTTAGCTGCCAGGAAATGGTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR-3UTR TCA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCGTCAGATCCTTCAGGTaGTTGCCTACTGGCCACAAG +
Preference number: 2 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFVRSFR*LPTGHK
Trigger: CTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGAC...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
3UTR-3UTR GCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACACAGAGATGCATCAACTaGCCAGGAAATTGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: RTMHLKKGNRVREVQELTQRCIN*PGNWVG
Trigger: TCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTG...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR GCA 90 bp ACTAATGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGGATCCTTCAGGTGATTaGCTACTGGCCACAAGGGCA +
Preference number: 2 (lower is better)
Translates to: TNGFEASLSIEESFISSMDPSGD*LLATRA
Trigger: TGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATC...CATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCATTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
3UTR-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGCTGACTGCATCTCTTaGTGTAGGTTCCAGATGAGA +
Preference number: 2 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIADCIS*CRFQMR
Trigger: TCTCATCTGGAACCTACACCAAGAGATGCAGTCAGC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCATACAACACAGCAACTaGAGAGGTCAGCTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCIQHSN*RGQLPP
Trigger: TGGAGGCAGCTGACCTCTCCAGTTGCTGTGTTGTAT...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR CCA 90 bp ACTAATGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGTTCCTCTTCTTCTCCTaGGCTTTTGGAACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: TNGFEASLSIEESFISSMFLFFS*AFGTGR
Trigger: TCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAA...CATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCATTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
3UTR-3UTR TCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGATCATCTGGGCATCTaGTTTCTAGAAGCCAATGAT +
Preference number: 2 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCDHLGI*FLEAND
Trigger: ATCATTGGCTTCTAGAAATCAGATGCCCAGATGATC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR TCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGGTGTAGGTTCCAGATaGGATAACAAACTAGTCTTG +
Preference number: 2 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCGVGSR*DNKLVL
Trigger: CAAGACTAGTTTGTTATCTCATCTGGAACCTACACC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR GCA 90 bp ATTTATTCAATGCTAAATAAGGTGAGGAGTGGCAAGTCTAAAATACATACCCTCGATCCTTCAGGTGATTaGCTACTGGCCACAAGGGCA +
Preference number: 2 (lower is better)
Translates to: IYSMLNKVRSGKSKIHTLDPSGD*LLATRA
Trigger: TGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATC...GAGGGTATGTATTTTAGACTTGCCACTCCTCACCTTATTTAGCATTGAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACACCCACATTTCAGAAATaGCAGAGTCAAAGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: RTMHLKKGNRVREVQELTPTFQK*QSQSQN
Trigger: ATTTTGGCTTTGACTCTGCCATTTCTGAAATGTGGG...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR CCA 90 bp ACTAATGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGTTTCTACCCTCCTTCTaGAAGTCAGATCCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: TNGFEASLSIEESFISSMFLPSF*KSDPSG
Trigger: ACCTGAAGGATCTGACTTCCAGAAGGAGGGTAGAAA...CATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
3UTR-3UTR TCA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCTGGAAGCCTAAGAGATaGACAATTCTTCCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAWKPKR*TILPSF
Trigger: AAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCA...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR GCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCTGTTTTTCCCAGAGATaGATCAACTGCCCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSCFSQR*INCPGN
Trigger: ATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR CAA 90 bp GGAGTGGCAAGTCTAAAATACATACCCTCTATGTACATTCTAATCTaGTTCATCCTCTACAGGTACAACAATATACACATTCACTCACCC +
Preference number: 2 (lower is better)
Translates to: GVASLKYIPSMYILI*FILYRYNNIHIHSP
Trigger: GGGTGAGTGAATGTGTATATTGTTGTACCTGTAGAGGATGAACAAGATTAGAATGTACATAGAGGGTATGTATTTTAGACTTGCCACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR CCA 72 bp CCTTCTGGAAGTCAGATCCTTCAGGTGATTGCCTACTaGCCACAAGGGCACCCATCATTTCCGTGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: PSGSQILQVIAY*PQGHPSFPWPL
Trigger: CAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
3UTR GCA 72 bp ATACCCACCTTCTGGAAGTCAGATCCTTCAGGTGATTaGCTACTGGCCACAAGGGCACCCATCATTTCCGTG +
Preference number: 3 (lower is better)
Translates to: IPTFWKSDPSGD*LLATRAPIISV
Trigger: CACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR CCA 72 bp AACTTATCCCCACCCCCATCAGTCATACCCACCTTCTaGAAGTCAGATCCTTCAGGTGATTGCCTACTGGCC +
Preference number: 3 (lower is better)
Translates to: NLSPPPSVIPTF*KSDPSGDCLLA
Trigger: GGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGATAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR TCA 72 bp AGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTaGTTGCCTACTGGCCACAAGGGCACCCATCATTTC +
Preference number: 3 (lower is better)
Translates to: SHTHLLEVRSFR*LPTGHKGTHHF
Trigger: GAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606599.1
3UTR-3UTR CAA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCCAACTGCCCAGGAAATaGGGTAGGAATACAACACAG +
Preference number: 3 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPQLPRK*GRNTTQ
Trigger: CTGTGTTGTATTCCTACCCAATTTCCTGGGCAGTTG...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR TCA 72 bp AAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATaGGATAACAAACTAGTCTTGGATCATCTGGGCATC +
Preference number: 3 (lower is better)
Translates to: KMLTASLGVGSR*DNKLVLDHLGI
Trigger: GATGCCCAGATGATCCAAGACTAGTTTGTTATCTCATCTGGAACCTACACCAAGAGATGCAGTCAGCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR CCA 72 bp ACAGACAGTAGATTAGTGGTTGGCCAGTCAAGGAGATaGAATTGGAAATGTCCACTAATGGGTTCGAAGCTT +
Preference number: 3 (lower is better)
Translates to: TDSRLVVGQSRR*NWKCPLMGSKL
Trigger: AAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACTGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
3UTR GCA 72 bp AGGGGTGTAAACAGTAAACAAAAGAGCTACTCACGCTaGATTTCAAACAATGTTAAGGCAGGCCCATCCAAA +
Preference number: 3 (lower is better)
Translates to: RGVNSKQKSYSR*ISNNVKAGPSK
Trigger: TTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGTTTACACCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
3UTR-3UTR CAA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTATAAGCCTTACCGATTaGTCGTCTTCTAAAAGTAAG +
Preference number: 3 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVISLTD*SSSKSK
Trigger: CTTACTTTTAGAAGACGACAAATCGGTAAGGCTTAT...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGGGTGGTTTGACGGTTaGGAGGTGGGATACATGGGC +
Preference number: 4 (lower is better)
Translates to: SGDCLLATRAPIISVASVGWFDG*EVGYMG
Trigger: GCCCATGTATCCCACCTCTCAACCGTCAAACCACCC...CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTAAGAGGCAGGGGGAATaGCAGGTCCCTGGTAGTTCG +
Preference number: 4 (lower is better)
Translates to: GDCLLATRAPIISVASVVKRQGE*QVPGSS
Trigger: CGAACTACCAGGGACCTGCCATTCCCCCTGCCTCTT...AACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCCCACGGCGACAGCTCTaGCCCGGGGGCGCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPPRRQL*PGGALD
Trigger: GTCTAGGGCGCCCCCGGGTCAGAGCTGTCGCCGTGG...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TCCCCACCCCCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTGATCAACTGCTTAGTGGCTaGCTGGGGGCTTTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPPPSVIPTFWKSDPSGDQLLSG*LGAFGR
Trigger: CCTGCCGAAAGCCCCCAGTCAGCCACTAAGCAGTTG...ATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR GCA 90 bp TCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGGGCCATCTGGAGGCTaGATATGCCATGTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SGDCLLATRAPIISVASVGPSGG*ICHVVP
Trigger: AGGCACTACATGGCATATGCAGCCTCCAGATGGCCC...CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCCCGCTGTCGCCTGGATaGTCTCCGCGGCCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPPLSPG*SPRPSR
Trigger: CCGGGACGGCCGCGGAGACCATCCAGGCGACAGCGG...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTGAGGGTGATCCTGGCTaGAGCTGGTACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GDCLLATRAPIISVASVVEGDPG*SWYCWK
Trigger: TTTCCAGCAGTACCAGCTCCAGCCAGGATCACCCTC...AACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGAGAGGTGGGATACATaGGCCATCTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SGDCLLATRAPIISVASVERWDT*AIWRLH
Trigger: ATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTC...CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCCACGGCGACAGCTCTaGCCCGGGGGCGCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTPRRQL*PGGALD
Trigger: GTCTAGGGCGCCCCCGGGTCAGAGCTGTCGCCGTGG...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTCAGATCCTTCAGGTaGTTGCCTACTGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: SGDCLLATRAPIISVASVVRSFR*LPTGHK
Trigger: CTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGAC...CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGCTGCCGCTGTCGCCTaGATGGTCTCCGCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPAAAVA*MVSAAV
Trigger: GACGGCCGCGGAGACCATCCAGGCGACAGCGGCAGC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TCTGGAAGTCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCAGAAGGTGGGTGTGGATaGGACACCTCTGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SGSQILQVIAYWPQGHPSEGGCG*DTSGEW
Trigger: CCACTCTCCAGAGGTGTCCCATCCACACCCACCTTC...TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAGCGGTACATGGTTCTTaGAGCGGCGGCCACGGCGAC +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLAVHGS*SGGHGD
Trigger: GTCGCCGTGGCCGCCGCTGCAAGAACCATGTACCGC...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AATGATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATGCGGTACATGGTTCTTaGAGCGGCGGCCACGGCGAC +
Preference number: 4 (lower is better)
Translates to: NDWAFPLLLLGFWNRQSYAVHGS*SGGHGD
Trigger: GTCGCCGTGGCCGCCGCTGCAAGAACCATGTACCGC...ATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATGCTGCCGCTGTCGCCTaGATGGTCTCCGCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNAAAVA*MVSAAV
Trigger: GACGGCCGCGGAGACCATCCAGGCGACAGCGGCAGC...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTGATCCTGGCTGGAGCTaGTACTGCTGGAAAAACTCT +
Preference number: 4 (lower is better)
Translates to: GDCLLATRAPIISVASVVDPGWS*YCWKNS
Trigger: AGAGTTTTTCCAGCAGTACCAGCTCCAGCCAGGATC...AACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGACATGGTCCCACAGATaGTGTTGCAGTCTTTGCACC +
Preference number: 4 (lower is better)
Translates to: SGDCLLATRAPIISVASVTWSHR*CCSLCT
Trigger: GGTGCAAAGACTGCAACACCATCTGTGGGACCATGT...CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR CCA 90 bp GGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTCACCCATCATTTCCGTaGCCTCTGTGGTTTCTATCC +
Preference number: 4 (lower is better)
Translates to: GDCLLATRAPIISVASVVHPSFP*PLWFLS
Trigger: GGATAGAAACCACAGAGGCCACGGAAATGATGGGTG...AACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR CCA 90 bp TCTGGAAGTCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCACAGGTGATTGCCTACTaGCCACAAGGGCACCCATCA +
Preference number: 4 (lower is better)
Translates to: SGSQILQVIAYWPQGHPSQVIAY*PQGHPS
Trigger: TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTG...TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR TCA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTTACAGCTGGAGCTaGAGACGGCAGGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKALYSWS*RRQGAC
Trigger: GCAAGCTCCCTGCCGTCTTCAGCTCCAGCTGTAAAG...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGATGGCAACATGCACCTaGCTGCAACAGATGACTGAA +
Preference number: 4 (lower is better)
Translates to: SGDCLLATRAPIISVASVMATCT*LQQMTE
Trigger: TTCAGTCATCTGTTGCAGTCAGGTGCATGTTGCCAT...CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp GGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTTCTCCTTGTTGTTTATaGAGCCGCTCTAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: GDCLLATRAPIISVASVVSPCCL*SRSNSV
Trigger: GACCGAGTTAGAGCGGCTTCATAAACAACAAGGAGA...AACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGAGAGCGTCTCCGGCTaGCGCTGTCGCCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIESVSG*RCRLDG
Trigger: ACCATCCAGGCGACAGCGGCAGCCGGAGACGCTCTC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCGGAGGTATCCGAGCTaGAGCAAACTGAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKARRYPS*SKLRGP
Trigger: AGGGCCTCTCAGTTTGCTGCAGCTCGGATACCTCCG...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AATGATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATCGCTGCTGCGGTACATaGTTCTTGCAGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: NDWAFPLLLLGFWNRQSYRCCGT*FLQRRP
Trigger: TGGCCGCCGCTGCAAGAACCATGTACCGCAGCAGCG...ATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGAGGACTGTTGTCTTTaGGAATCCCAGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SDPSGDCLLATRAPIISVEDCCL*ESQEGD
Trigger: GTCCCCTTCCTGGGATTCCCAAAGACAACAGTCCTC...CACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGGATGGAATGGACACCTaGACAGGCACTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKADGMDT*TGTWAA
Trigger: TGCGGCCCAAGTGCCTGTCCAGGTGTCCATTCCATC...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TTATCCCCACCCCCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTGTCAGATCCTTCAGGTaGTTGCCTACTGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: LSPPPSVIPTFWKSDPSGVRSFR*LPTGHK
Trigger: CTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGAC...ACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR GCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCGAGAGCGTCTCCGGCTaGCGCTGTCGCCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTESVSG*RCRLDG
Trigger: ACCATCCAGGCGACAGCGGCAGCCGGAGACGCTCTC...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp CTTATCCCCACCCCCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGACATGGTCCCACAGATaGTGTTGCAGTCTTTGCACC +
Preference number: 4 (lower is better)
Translates to: LIPTPISHTHLLEVRSFRTWSHR*CCSLCT
Trigger: GGTGCAAAGACTGCAACACCATCTGTGGGACCATGT...CCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR TCA 90 bp TCTGGAAGTCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTCATAATGTTATCCTaGAGCCGACTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: SGSQILQVIAYWPQGHPSFIMLS*SRLTST
Trigger: GGTGGAGGTGAGTCGGCTTCAGGATAACATTATGAA...TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCAACTGCTTAGTGGCTaGCTGGGGGCTTTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGQLLSG*LGAFGR
Trigger: CCTGCCGAAAGCCCCCAGTCAGCCACTAAGCAGTTG...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGATCTGGCTGGGGAATaGAGCAGCAACTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGDLAGE*SSNSGA
Trigger: TGCCCCAGAGTTGCTGCTTCATTCCCCAGCCAGATC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACCGGAGGAGCGAGCGCTaGTGCGGTACATGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHRRSER*CGTWFL
Trigger: CAAGAACCATGTACCGCAGCAGCGCTCGCTCCTCCG...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGTCCCACAGATGGTGTTaGAGTCTTTGCACCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SDPSGDCLLATRAPIISVSHRWC*SLCTSD
Trigger: ATCACTGGTGCAAAGACTGCAACACCATCTGTGGGA...CACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR GCA 90 bp GGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTGAAGACTTTTGGAATTaGCCCTGTGTGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GDCLLATRAPIISVASVVEDFWN*PCVCFL
Trigger: TAAGAAGCACACACAGGGGCAATTCCAAAAGTCTTC...AACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR GCA 90 bp TACAACTTATCCCCACCCCCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTGATCCTTCAGGTGATTaGCTACTGGCCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: YNLSPPPSVIPTFWKSDPDPSGD*LLATRA
Trigger: TGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATC...AGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGATAAGTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR CCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAGAAGGTGGGTGTGGATaGGACACCTCTGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLEGGCG*DTSGEW
Trigger: CCACTCTCCAGAGGTGTCCCATCCACACCCACCTTC...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAACCTGGACAGGCACTTaGGCCGCAGGAATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLTWTGT*AAGIEP
Trigger: AGGCTCAATTCCTGCGGCCCAAGTGCCTGTCCAGGT...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAACAGGTCAAGGGCCTaGTGTGTTCCCTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGNRSRA*CVPSRP
Trigger: GGGCCTAGAGGGAACACACCAGGCCCTTGACCTGTT...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp ACTAATGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGGTCCCAAGAAGGGACTaGGAGGCCCTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TNGFEASLSIEESFISSMVPRRD*EALPPG
Trigger: CCCAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGAC...CATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCATTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAACTCCAACCAGCTCCTaGCTCAAGCTCCTACTTCGC +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFETPTSS*LKLLLR
Trigger: GCGAAGTAGGAGCTTGAGTCAGGAGCTGGTTGGAGT...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGCTGTGCTGAGGCCATaGTGGCTACAGGCAACACTG +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPAVLRP*WLQATL
Trigger: CAGTGTTGCCTGTAGCCATCATGGCCTCAGCACAGC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACAGGAGCGAGCGCTGCTaGGGTACATGGTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHRSERC*GTWFLQ
Trigger: CTGCAAGAACCATGTACCGCAGCAGCGCTCGCTCCT...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTCGGAGGTATCCGAGCTaGAGCAAACTGAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIRRYPS*SKLRGP
Trigger: AGGGCCTCTCAGTTTGCTGCAGCTCGGATACCTCCG...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp GGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTCTTTGCACCAGTGATTaGCAGCATCATAATACTCAT +
Preference number: 4 (lower is better)
Translates to: GDCLLATRAPIISVASVVLCTSD*QHHNTH
Trigger: ATGAGTATTATGATGCTGGCAATCACTGGTGCAAAG...AACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTCGTCTTTAGGCCGGTaGGAAGAGACGGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPSSLGR*EETEER
Trigger: TCGCTCCTCCGTCTCTTCCCACCGGCCTAAAGACGA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAATCCACAGGAGAAGGTaGGTGTGGATGGGACACCTC +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLIHRRR*VWMGHL
Trigger: GAGGTGTCCCATCCACACCCACCTTCTCCTGTGGAT...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAATCCACAGGAGAAGGTaGGTGTGGATGGGACACCTC +
Preference number: 4 (lower is better)
Translates to: DWAFPLLLLGFWNRQSYKIHRRR*VWMGHL
Trigger: GAGGTGTCCCATCCACACCCACCTTCTCCTGTGGAT...TTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTAAGAGGCAGGGGGAATaGCAGGTCCCTGGTAGTTCG +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIKRQGE*QVPGSS
Trigger: CGAACTACCAGGGACCTGCCATTCCCCCTGCCTCTT...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGAGAGGTGGGATACATaGGCCATCTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGERWDT*AIWRLH
Trigger: ATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTGCTTAGTGGCTGACTaGGGGCTTTCGGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPCLVAD*GLSAGL
Trigger: CAAGCCTGCCGAAAGCCCCCAGTCAGCCACTAAGCA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAACAGGTGATTGCCTACTaGCCACAAGGGCACCCATCA +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFEQVIAY*PQGHPS
Trigger: TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTG...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCTGGAAGTCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCTACCCTCCTTCTaGAAGTCAGATCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SGSQILQVIAYWPQGHPSFLPSF*KSDPSG
Trigger: ACCTGAAGGATCTGACTTCCAGAAGGAGGGTAGAAA...TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTACAGATTATCCACTGGTaGCCCCAGCCGATCACTAAG +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLQIIHW*PQPITK
Trigger: CTTAGTGATCGGCTGGGGTCACCAGTGGATAATCTG...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGGATGTAAAACTTGGGTaGTCCCCTCCCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKADVKLG*SPPMLF
Trigger: AAACAGCATGGGAGGGGATCACCCAAGTTTTACATC...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAACTCCAACCAGCTCCTaGCTCAAGCTCCTACTTCGC +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTTPTSS*LKLLLR
Trigger: GCGAAGTAGGAGCTTGAGTCAGGAGCTGGTTGGAGT...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCTTTACAGCTGGAGCTaGAGACGGCAGGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCLYSWS*RRQGAC
Trigger: GCAAGCTCCCTGCCGTCTTCAGCTCCAGCTGTAAAG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGAGTGGGTATTGCTATaGTGTGCCTCCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGEWVLL*CASLLS
Trigger: AGAGAGCAGGGAGGCACATCATAGCAATACCCACTC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGTATTGTGCATATGAGTaGAGAAATCAAACATGGTCC +
Preference number: 4 (lower is better)
Translates to: SGDCLLATRAPIISVASVYCAYE*RNQTWS
Trigger: GGACCATGTTTGATTTCTTCACTCATATGCACAATA...CACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS-3UTR TCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAAAGATAGCATTTGCTTaGGCAGCAGACGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLKIAFA*AADGAA
Trigger: AGCTGCCCCGTCTGCTGCTCAAGCAAATGCTATCTT...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTGGCAGCTGGCTGTGCTaGGGCCATGATGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVGSWLC*GHDGYR
Trigger: CCTGTAGCCATCATGGCCTCAGCACAGCCAGCTGCC...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTTCACTGAACACACTTaGGAGGGGTGGTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIFTEHT*EGWWRT
Trigger: CGTCCTCCACCACCCCTCTCAAGTGTGTTCAGTGAA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCAGGAGCGAGCGCTGCTaGGGTACATGGTTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTRSERC*GTWFLQ
Trigger: CTGCAAGAACCATGTACCGCAGCAGCGCTCGCTCCT...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTACCCATTGGTAGAGGTTaGCCTGAGGTTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLPIGRG*PEVPSR
Trigger: CCTTGAAGGAACCTCAGGGCAACCTCTACCAATGGG...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTGCAATTGACTAATCTCTaGTACTCCAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SDPSGDCLLATRAPIISVQLTNL*YSNIQP
Trigger: GGGCTGGATATTGGAGTAGCAGAGATTAGTCAATTG...CACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTACTGGAGAGTGGGTATTaGTATGATGTGCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLLESGY*YDVPPC
Trigger: GCAGGGAGGCACATCATAGCAATACCCACTCTCCAG...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCGCAGAGACTCTTTCTaGTTAGGCTTATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKARRDSF*LGLSGV
Trigger: GACTCCTGATAAGCCTAAGCAGAAAGAGTCTCTGCG...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTACGCTTTATGGCATCTTaGTTGGCCTCACTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLRFMAS*LASLWV
Trigger: GACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCG...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGTCGTCTTTAGGCCGGTaGGAAGAGACGGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMSSLGR*EETEER
Trigger: TCGCTCCTCCGTCTCTTCCCACCGGCCTAAAGACGA...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACAGACCCCGAGAGCACTaGGAGCTTCGAGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHRPREH*ELRVKT
Trigger: TGTCTTCACTCGAAGCTCCCAGTGCTCTCGGGGTCT...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGAACTCTCAAGCTGCATaGAGGGCTCCATTATGTCCA +
Preference number: 4 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKANSQAA*RAPLCP
Trigger: TGGACATAATGGAGCCCTCCATGCAGCTTGAGAGTT...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTGGCTAGCTCTCTCATaGGGCAGCAGGAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPWLALS*GSRKSV
Trigger: CACAGACTTCCTGCTGCCCCATGAGAGAGCTAGCCA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCACCTGGACAGGCACTTaGGCCGCAGGAATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFTWTGT*AAGIEP
Trigger: AGGCTCAATTCCTGCGGCCCAAGTGCCTGTCCAGGT...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTATGCTTGGCCTCACTCTaGGTCTTTGAAGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLCLASL*VFEAQG
Trigger: ACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCA...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGGTCCCAAGAAGGGACTaGGAGGCCCTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKVPRRD*EALPPG
Trigger: CCCAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGAC...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAACCAGCCCTATTGTCTTaGGCAAGTCATGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFEPALLS*ASHGSS
Trigger: CGAAGATCCATGACTTGCTCAAGACAATAGGGCTGG...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGATGGCTTCTTGCCATaGAGTCGTTCCTGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCDGFLP*SRSWVR
Trigger: ACGCACCCAGGAACGACTTCATGGCAAGAAGCCATC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCGATGGCTTCTTGCCATaGAGTCGTTCCTGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTDGFLP*SRSWVR
Trigger: ACGCACCCAGGAACGACTTCATGGCAAGAAGCCATC...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAACTGCAACAGATGACTaGAACCCACTACCAACCACC +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLTATDD*NPLPTT
Trigger: GGTGGTTGGTAGTGGGTTTCAGTCATCTGTTGCAGT...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTAGGTACAGGGTGGTTTaGCGGTTGAGAGGTGGGATA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIRYRVV*RLRGGI
Trigger: TATCCCACCTCTCAACCGTCAAACCACCCTGTACCT...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGAGGTACAGGGTGGTTTaGCGGTTGAGAGGTGGGATA +
Preference number: 4 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGRYRVV*RLRGGI
Trigger: TATCCCACCTCTCAACCGTCAAACCACCCTGTACCT...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTCAACTGCTTAGTGGCTaGCTGGGGGCTTTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVQLLSG*LGAFGR
Trigger: CCTGCCGAAAGCCCCCAGTCAGCCACTAAGCAGTTG...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACCCTTGGAGGGGACCTTaGCACTGGAGCTTTAACCAA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHPWRGP*HWSFNQ
Trigger: TTGGTTAAAGCTCCAGTGTCAAGGTCCCCTCCAAGG...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGGGAAGTACAGGAGTTaGCATGCCAATAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGGKYRS*HANKGC
Trigger: ACACCCCTTATTGGCATGTCAACTCCTGTACTTCCC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCCCATTGGTAGAGGTTaGCCTGAGGTTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGPIGRG*PEVPSR
Trigger: CCTTGAAGGAACCTCAGGGCAACCTCTACCAATGGG...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAATCGTTCCTGGGTGCGTaGAGCCAATTGACTAATCTC +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFESFLGA*SQLTNL
Trigger: GAGATTAGTCAATTGGCTGCACGCACCCAGGAACGA...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCGCCTCTTCTGCCTCTTaGCGTAGCTCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAASSAS*RSSAMS
Trigger: GGACATTGCAGAGCTACGGCAAGAGGCAGAAGAGGC...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATGCCTCTTCTGCCTCTTaGCGTAGCTCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNASSAS*RSSAMS
Trigger: GGACATTGCAGAGCTACGGCAAGAGGCAGAAGAGGC...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGAAGCCATAGGTGCTaGCTGTGCTTTTTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIGSHRC*LCFLGL
Trigger: TAGGCCCAAAAAGCACAGGCAGCACCTATGGCTTCC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGCGCTGCTGCGGTACATaGTTCTTGCAGCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKRCCGT*FLQRRP
Trigger: TGGCCGCCGCTGCAAGAACCATGTACCGCAGCAGCG...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACAAGCCGTCGCCGTTCTaGTGTGCTAACACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHKPSPF*CANTEV
Trigger: CACTTCTGTGTTAGCACACCAGAACGGCGACGGCTT...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCCTGACAATCCAGGGATaGAACAGCCAGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPLTIQG*NSQYHH
Trigger: GTGGTGGTACTGGCTGTTCCATCCCTGGATTGTCAG...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGATCCTGGCTGGAGCTaGTACTGCTGGAAAAACTCT +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGDPGWS*YCWKNS
Trigger: AGAGTTTTTCCAGCAGTACCAGCTCCAGCCAGGATC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGAGGGTGATCCTGGCTaGAGCTGGTACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCEGDPG*SWYCWK
Trigger: TTTCCAGCAGTACCAGCTCCAGCCAGGATCACCCTC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGAAGCTAAACCACTGCCATCCTaGCTAGCTCTCTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: WVRSFSFHRGVFHFLYEAKPLPS*LALSWG
Trigger: GCCCCATGAGAGAGCTAGCCAGGATGGCAGTGGTTT...AGCTTCATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTCTGCTCTCTAGTCTGTaGGGATCTGAGGAACGTCGA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEILLSSL*GSEERR
Trigger: TCGACGTTCCTCAGATCCCCACAGACTAGAGAGCAG...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACATTGACGGTTGAGAGGTaGGATACATGGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTLTVER*DTWAIW
Trigger: CCAGATGGCCCATGTATCCCACCTCTCAACCGTCAA...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAGATGGAATGGACACCTaGACAGGCACTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRDGMDT*TGTWAA
Trigger: TGCGGCCCAAGTGCCTGTCCAGGTGTCCATTCCATC...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp ACTAATGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGTGCTTAGTGGCTGACTaGGGGCTTTCGGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TNGFEASLSIEESFISSMCLVAD*GLSAGL
Trigger: CAAGCCTGCCGAAAGCCCCCAGTCAGCCACTAAGCA...CATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTCTCATCAGAAGGAATaGCAGCTGGCTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEISHQKE*QLAVLR
Trigger: CCTCAGCACAGCCAGCTGCCATTCCTTCTGATGAGA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATGGTTCTACACCAGGTaGTCCTGGCTCTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRWFYTR*SWLSQV
Trigger: GACCTGGGAGAGCCAGGACCACCTGGTGTAGAACCA...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTGGGGATCTATGTGCTaGGCTTACCCGAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIWGSMC*AYPSSA
Trigger: TGCACTACTCGGGTAAGCCCAGCACATAGATCCCCA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTATCCCCACCCCCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTAAATCTGAAGACTTTTaGAATTGCCCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSPPPSVIPTFWKSDPSGKSEDF*NCPCVC
Trigger: GCACACACAGGGGCAATTCCAAAAGTCTTCAGATTT...ACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR TCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATGAGTGGGTATTGCTATaGTGTGCCTCCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNEWVLL*CASLLS
Trigger: AGAGAGCAGGGAGGCACATCATAGCAATACCCACTC...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCCTGACTGCAACAGATaGCTGAAACCCACTACCAAC +
Preference number: 4 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGPDCNR*LKPTTN
Trigger: GTTGGTAGTGGGTTTCAGTCATCTGTTGCAGTCAGG...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCGGGTGGTTTGACGGTTaGGAGGTGGGATACATGGGC +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSGWFDG*EVGYMG
Trigger: GCCCATGTATCCCACCTCTCAACCGTCAAACCACCC...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACACTCACTCTGGGTCTTTaGAGCCCAAGGTCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTLTLGL*SPRSVV
Trigger: TACAACAGACCTTGGGCTTCAAAGACCCAGAGTGAG...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAACCAACATGCTCAGAATaGGGGAAAAACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFEPTCSE*GKNHCH
Trigger: ATGGCAGTGGTTTTTCCCGCATTCTGAGCATGTTGG...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp GATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAAGGGAGCTTGCCTTCTaGCTCATAACTTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: DWAFPLLLLGFWNRQSYKRELAF*LITSLS
Trigger: TGAGAGTGAAGTTATGAGGCAGAAGGCAAGCTCCCT...TTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp GATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGTAATGATGGCTTCTTaGCATGAAGTCGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DWAFPLLLLGFWNRQSYKVMMAS*HEVVPG
Trigger: CCCAGGAACGACTTCATGGCAAGAAGCCATCATTAC...TTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGCTGGAGAGTGGGTATTaGTATGATGTGCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMLESGY*YDVPPC
Trigger: GCAGGGAGGCACATCATAGCAATACCCACTCTCCAG...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACTCTGGAGGCTGCATATaGCATGTAGTGCCTATAGGC +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHSGGCI*HVVPIG
Trigger: GCCTATAGGCACTACATGGCATATGCAGCCTCCAGA...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGACGCTTTAGCTCACTCTaGCGTCGCCGTTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRRFSSL*RRRSVS
Trigger: AGAGACAGAACGGCGACGGCAGAGTGAGCTAAAGCG...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCGGGGGCAGAAATGTCTaGTGCAGTCCTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTGGRNV*CSPSFW
Trigger: CCAAAAGGAAGGACTGCAGCAGACATTTCTGCCCCC...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCAAGCCGTCGCCGTTCTaGTGTGCTAACACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTKPSPF*CANTEV
Trigger: CACTTCTGTGTTAGCACACCAGAACGGCGACGGCTT...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGAGACCCCGAGAGCACTaGGAGCTTCGAGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLRPREH*ELRVKT
Trigger: TGTCTTCACTCGAAGCTCCCAGTGCTCTCGGGGTCT...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAAGAGGCCCTTCCTCCTaGGAAATATATCGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFERGPSS*EIYRSR
Trigger: TCTTGAGCGATATATTTCCCAGGAGGAAGGGCCTCT...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCATAACGGGGTCTTTTaGCCTCCCGGCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTHNGVF*PPGSFL
Trigger: AAGAAAGGAGCCGGGAGGCCAAAAGACCCCGTTATG...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAGAGAAACCTAGGACTTaGGCTTCTTCTACGCTGTCG +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTEKPRT*ASSTLS
Trigger: CGACAGCGTAGAAGAAGCCCAAGTCCTAGGTTTCTC...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACACCTCTCGCTTTCGTCTaGCAAGATCCAGTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTPLAFV*QDPVLE
Trigger: TTCGAGAACTGGATCTTGCCAGACGAAAGCGAGAGG...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGAGGACTGTTGTCTTTaGGAATCCCAGGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCEDCCL*ESQEGD
Trigger: GTCCCCTTCCTGGGATTCCCAAAGACAACAGTCCTC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGTGGCTAGCTCTCTCATaGGGCAGCAGGAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLWLALS*GSRKSV
Trigger: CACAGACTTCCTGCTGCCCCATGAGAGAGCTAGCCA...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGAAGCTCTGCTCTCTAGTCTGTaGGGATCTGAGGAACGTCGA +
Preference number: 4 (lower is better)
Translates to: WVRSFSFHRGVFHFLYEALLSSL*GSEERR
Trigger: TCGACGTTCCTCAGATCCCCACAGACTAGAGAGCAG...AGCTTCATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGGATACATGGGCCATCTaGAGGCTGCATATGCCATGT +
Preference number: 4 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGDTWAI*RLHMPC
Trigger: ACATGGCATATGCAGCCTCCAGATGGCCCATGTATC...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAAGAGAGGATCTTTGTaGCCATCCTTCTCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGKRGSL*PSFSLR
Trigger: ACGAAGGGAGAAGGATGGCCACAAAGATCCTCTCTT...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTTTGATTCCTTGTTaGAGGAGGAGTTTGAGAACG +
Preference number: 4 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKALLIPC*RRSLRT
Trigger: CGTTCTCAAACTCCTCCTCCAACAAGGAATCAAAAG...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCACATGGTCCCACAGATaGTGTTGCAGTCTTTGCACC +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPTWSHR*CCSLCT
Trigger: GGTGCAAAGACTGCAACACCATCTGTGGGACCATGT...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTCTGGCTTGCTCATTGTaGCTGAACATGACTTGCGGA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEILACSL*LNMTCG
Trigger: TCCGCAAGTCATGTTCAGCCACAATGAGCAAGCCAG...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGATTCTGTGTGGTCCTaGATGGCACCAACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGDSVWS*MAPTVV
Trigger: AACTACAGTTGGTGCCATCCAGGACCACACAGAATC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCACACTGGATTCTGTGTaGTCCTGGATGGCACCAACT +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPTLDSV*SWMAPT
Trigger: AGTTGGTGCCATCCAGGACCACACAGAATCCAGTGT...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGCTGACTGCATCTCTTaGTGTAGGTTCCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGADCIS*CRFQMR
Trigger: TCTCATCTGGAACCTACACCAAGAGATGCAGTCAGC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATGATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATTTCCTCTTCTTCTCCTaGGCTTTTGGAACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NDWAFPLLLLGFWNRQSYFLFFS*AFGTGR
Trigger: TCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAA...ATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
3UTR CAA 72 bp GTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATaGGGTAGGAATACAACACAGCAACTGGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VFFPEMHQLPRK*GRNTTQQLERS
Trigger: TGACCTCTCCAGTTGCTGTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAGGTCATTGCCAACAGTaGTCCTTAAGCTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGGHCQQ*SLSSFP
Trigger: TGGAAAAGAGCTTAAGGATCACTGTTGGCAATGACC...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTGTGCGTGCAGCCAATTaGCTAATCTCTGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: QSRRWNWKCPLMGSKLLFVRAAN*LISATP
Trigger: TGGAGTAGCAGAGATTAGTCAATTGGCTGCACGCAC...AAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACATGGCAACATGCACCTaGCTGCAACAGATGACTGAA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHMATCT*LQQMTE
Trigger: TTCAGTCATCTGTTGCAGTCAGGTGCATGTTGCCAT...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTCTCCTTGTTGTTTATaGAGCCGCTCTAACTCGGTC +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPSPCCL*SRSNSV
Trigger: GACCGAGTTAGAGCGGCTTCATAAACAACAAGGAGA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACTTCATAATGTTATCCTaGAGCCGACTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHFIMLS*SRLTST
Trigger: GGTGGAGGTGAGTCGGCTTCAGGATAACATTATGAA...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCCCACGAAGCCAGGGCTaGGAGTCTGAGATACAACTG +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSPRSQG*ESEIQL
Trigger: CAGTTGTATCTCAGACTCTCAGCCCTGGCTTCGTGG...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGACACAGTTTATCTTTTTaGACTCCAGAGGTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGHSLSF*TPEVRV
Trigger: CACACGGACCTCTGGAGTTCAAAAAGATAAACTGTG...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAGAAAAACTCTCAAGCTaGATGGAGGGCTCCATTATG +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLEKLSS*MEGSIM
Trigger: CATAATGGAGCCCTCCATGCAGCTTGAGAGTTTTTC...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCCCAACATGCTCAGAATaGGGGAAAAACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPPTCSE*GKNHCH
Trigger: ATGGCAGTGGTTTTTCCCGCATTCTGAGCATGTTGG...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAAGACGGCAGGGAGCTTaGCTTCTGCCTCATAACTTC +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRRRQGA*LLPHNF
Trigger: GAAGTTATGAGGCAGAAGGCAAGCTCCCTGCCGTCT...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATAAGACGGCAGGGAGCTTaGCTTCTGCCTCATAACTTC +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSIRRQGA*LLPHNF
Trigger: GAAGTTATGAGGCAGAAGGCAAGCTCCCTGCCGTCT...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTCGTTCCTGGGTGCGTaGAGCCAATTGACTAATCTC +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCSFLGA*SQLTNL
Trigger: GAGATTAGTCAATTGGCTGCACGCACCCAGGAACGA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGTAATGATGGCTTCTTaGCATGAAGTCGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIVMMAS*HEVVPG
Trigger: CCCAGGAACGACTTCATGGCAAGAAGCCATCATTAC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp CAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTTCTGGAGGCTGCATATaGCATGTAGTGCCTATAGGC +
Preference number: 4 (lower is better)
Translates to: QSRRWNWKCPLMGSKLLFSGGCI*HVVPIG
Trigger: GCCTATAGGCACTACATGGCATATGCAGCCTCCAGA...AAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTGGGCCATCTGGAGGCTaGATATGCCATGTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIGPSGG*ICHVVP
Trigger: AGGCACTACATGGCATATGCAGCCTCCAGATGGCCC...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCTCTACAACTTATCCCCACCCCCATCAGTCATACCCACCTTCTGGAAGTCAGACTTTGCACCAGTGATTaGCAGCATCATAATACTCAT +
Preference number: 4 (lower is better)
Translates to: SLQLIPTPISHTHLLEVRLCTSD*QHHNTH
Trigger: ATGAGTATTATGATGCTGGCAATCACTGGTGCAAAG...TCTGACTTCCAGAAGGTGGGTATGACTGATGGGGGTGGGGATAAGTTGTAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR GCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTCCCACAGATGGTGTTaGAGTCTTTGCACCAGTGAT +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEISHRWC*SLCTSD
Trigger: ATCACTGGTGCAAAGACTGCAACACCATCTGTGGGA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACCCAAGGGCTGGTATGTaGAACAACAGTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHPRAGM*NNSFPR
Trigger: TCTGGGAAAACTGTTGTTGCACATACCAGCCCTTGG...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTGGCTGAACATGACTTaGGGAGTACTGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIWLNMT*GVLWME
Trigger: TTCCATCCACAGTACTCCGCAAGTCATGTTCAGCCA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAAGCCAAGATAGCATTTaGTTGAGCAGCAGACGGGGC +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRSQDSI*LSSRRG
Trigger: GCCCCGTCTGCTGCTCAAGCAAATGCTATCTTGGCT...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCCATAGGTGCTGCCTGTaGTTTTTGGGCCTACATGTT +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPHRCCL*FLGLHV
Trigger: AACATGTAGGCCCAAAAAGCACAGGCAGCACCTATG...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATAGATCCTTCAGGTGATTaGCTACTGGCCACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSIDPSGD*LLATRA
Trigger: TGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATC...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGTGCTAACACAGAAGTaGTCATTGCCAACAGTGATC +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFEVLTQK*SLPTVI
Trigger: GATCACTGTTGGCAATGACCACTTCTGTGTTAGCAC...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAAGAGGCCCTTCCTCCTaGGAAATATATCGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTRGPSS*EIYRSR
Trigger: TCTTGAGCGATATATTTCCCAGGAGGAAGGGCCTCT...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATCCTCTCGCTTTCGTCTaGCAAGATCCAGTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNPLAFV*QDPVLE
Trigger: TTCGAGAACTGGATCTTGCCAGACGAAAGCGAGAGG...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGCTGACAATCCAGGGATaGAACAGCCAGTACCACCAC +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLLTIQG*NSQYHH
Trigger: GTGGTGGTACTGGCTGTTCCATCCCTGGATTGTCAG...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAAACTCTCAAGCTGCATaGAGGGCTCCATTATGTCCA +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTNSQAA*RAPLCP
Trigger: TGGACATAATGGAGCCCTCCATGCAGCTTGAGAGTT...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACTGGAGCTGGTACTGCTaGAAAAACTCTCAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHWSWYC*KNSQAA
Trigger: TGCAGCTTGAGAGTTTTTCCAGCAGTACCAGCTCCA...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCAAACCACTGCCATCCTaGCTAGCTCTCTCATGGGGC +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSKPLPS*LALSWG
Trigger: GCCCCATGAGAGAGCTAGCCAGGATGGCAGTGGTTT...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCTGGATGGGACACCTCTaGAGAGTGGGTATTGCTATG +
Preference number: 4 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTWMGHL*RVGIAM
Trigger: CATAGCAATACCCACTCTCCAGAGGTGTCCCATCCA...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATATTGACGGTTGAGAGGTaGGATACATGGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSILTVER*DTWAIW
Trigger: CCAGATGGCCCATGTATCCCACCTCTCAACCGTCAA...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTATCAGGAGTCACAGTaGGGATCACACGAAGATTGG +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPYQESQ*GSHEDW
Trigger: CCAATCTTCGTGTGATCCCCACTGTGACTCCTGATA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGGCTACAGGCAACACTaGGTTCAAAATGTTAGGACC +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPGYRQH*VQNVRT
Trigger: GGTCCTAACATTTTGAACCCAGTGTTGCCTGTAGCC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAACAGAGAACAGGGTCTaGTCTCGGTCACTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRTENRV*SRSLSL
Trigger: GAGTGAGAGTGACCGAGACCAGACCCTGTTCTCTGT...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGATGCTATTTTCCCCATTaGCCAATGGACCACCACTTA +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGCYFPH*PMDHHL
Trigger: TAAGTGGTGGTCCATTGGCCAATGGGGAAAATAGCA...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGCTGCCTGTGCTTTTTaGGCCTACATGTTCTACAAC +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPAACAF*AYMFYN
Trigger: GTTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACTGTGGGGTCCAATGCTaGTACTTACTCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHCGVQC*YLLPHQ
Trigger: TTGATGAGGGAGTAAGTACCAGCATTGGACCCCACA...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAGAATCATCTATGCTGTaGGGTCCAATGCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLESSML*GPMLVL
Trigger: AAGTACCAGCATTGGACCCCACAGCATAGATGATTC...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTGTTTTTGGTTTCTCTaGGCTCTCCCAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCCFWFL*ALPGLW
Trigger: CCAGAGACCTGGGAGAGCCCAGAGAAACCAAAAACA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCTGACACAAGACAGTTaGGGATCTATGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCLTQDS*GSMCWA
Trigger: AGCCCAGCACATAGATCCCCAACTGTCTTGTGTCAG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAAGAAAAAGATGGGATTaGTTCGAAGTCAGCGGGATC +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLRKRWD*FEVSGI
Trigger: GATCCCGCTGACTTCGAACCAATCCCATCTTTTTCT...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACTTTAGAAGGGTCACCTaGCTCAGAGAGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHFRRVT*LREWRT
Trigger: TGTTCTCCACTCTCTGAGCCAGGTGACCCTTCTAAA...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATCACCCATCATTTCCGTaGCCTCTGTGGTTTCTATCC +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNHPSFP*PLWFLS
Trigger: GGATAGAAACCACAGAGGCCACGGAAATGATGGGTG...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AATGATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATGGCCAGTCAAGGAGATaGAATTGGAAATGTCCACTA +
Preference number: 4 (lower is better)
Translates to: NDWAFPLLLLGFWNRQSYGQSRR*NWKCPL
Trigger: TAGTGGACATTTCCAATTCCATCTCCTTGACTGGCC...ATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATACTGGGAGCTTCGAGTaGAGACAGAATCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNTGSFE*RQNHQS
Trigger: TGACTGATGATTCTGTCTTCACTCGAAGCTCCCAGT...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCGCAACAGCTCATCATaGCAACTGATATGGGGACTA +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCRNSSS*QLIWGL
Trigger: TAGTCCCCATATCAGTTGTCATGATGAGCTGTTGCG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAGTATGGAGTAGCCTTTaGGTTTTTCTCGATTCCGTT +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLVWSSL*VFLDSV
Trigger: AACGGAATCGAGAAAAACTCAAAGGCTACTCCATAC...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp GATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGTATGGAGTAGCCTTTaGGTTTTTCTCGATTCCGTT +
Preference number: 4 (lower is better)
Translates to: DWAFPLLLLGFWNRQSYKVWSSL*VFLDSV
Trigger: AACGGAATCGAGAAAAACTCAAAGGCTACTCCATAC...TTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATATCTGGTCCTGAAATATaGCCCACTGGATGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSISGPEI*PTGWSD
Trigger: GTCTGACCATCCAGTGGGTCATATTTCAGGACCAGA...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATAACTGCAACAGATGACTaGAACCCACTACCAACCACC +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSITATDD*NPLPTT
Trigger: GGTGGTTGGTAGTGGGTTTCAGTCATCTGTTGCAGT...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGACCTGACTGCAACAGATaGCTGAAACCCACTACCAAC +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRPDCNR*LKPTTN
Trigger: GTTGGTAGTGGGTTTCAGTCATCTGTTGCAGTCAGG...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGATGTATATCTAACAGTTaGGGAGGTGGTTCTACACCA +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGCISNS*GGGSTP
Trigger: TGGTGTAGAACCACCTCCTCAACTGTTAGATATACA...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTCTAATTTTGCCTTTGTaGAAGAGCAAGCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEILILPL*KSKPVD
Trigger: GTCCACAGGCTTGCTCTTTCACAAAGGCAAAATTAG...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCCTCCAGAGGTCCGTGTaGCAAAGTCAACAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSLQRSV*QSQQGL
Trigger: CAGACCTTGTTGACTTTGTCACACGGACCTCTGGAG...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATGGTGATCCCCTCCCATaGTGTTTATCTTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNGDPLP*CLSSLC
Trigger: ACACAGTGAAGATAAACAGCATGGGAGGGGATCACC...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGACTTCCTCAGGCCGATaGAAAGAATATCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLTSSGR*KEYPGS
Trigger: GGAGCCAGGATATTCTTTGCATCGGCCTGAGGAAGT...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTACAATTGACTAATCTCTaGTACTCCAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLQLTNL*YSNIQP
Trigger: GGGCTGGATATTGGAGTAGCAGAGATTAGTCAATTG...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTCTCCCTTCGTTTCTTaGGCAGCATTTCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPSPFVS*AAFLLV
Trigger: AACAAGGAGAAATGCTGCGCAAGAAACGAAGGGAGA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTCCCACAGATGGTGTTaGAGTCTTTGCACCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLLLGFWNRQSYKALICNSHRWC*SLCTSD
Trigger: ATCACTGGTGCAAAGACTGCAACACCATCTGTGGGA...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACGGCCACCAGAGTTTTTaGAATGGGCTTTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHGHQSF*NGLFRV
Trigger: AACTCTGAAAAGCCCATTGCAAAAACTCTGGTGGCC...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCAGAGATGCATCAACTaGCCAGGAAATTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCQRCIN*PGNWVG
Trigger: TCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGATGTTTTTCCCAGAGATaGATCAACTGCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGCFSQR*INCPGN
Trigger: ATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACGGGTTAGCAGGACAATaGATCTCAAGAAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHGLAGQ*ISRKAT
Trigger: TGTTGCCTTTCTTGAGATGCATTGTCCTGCTAACCC...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCCATAACGGGGTCTTTTaGCCTCCCGGCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSHNGVF*PPGSFL
Trigger: AAGAAAGGAGCCGGGAGGCCAAAAGACCCCGTTATG...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGGAGAAACCTAGGACTTaGGCTTCTTCTACGCTGTCG +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLEKPRT*ASSTLS
Trigger: CGACAGCGTAGAAGAAGCCCAAGTCCTAGGTTTCTC...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGTGGAGCTGGTACTGCTaGAAAAACTCTCAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMWSWYC*KNSQAA
Trigger: TGCAGCTTGAGAGTTTTTCCAGCAGTACCAGCTCCA...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAGATACATGGGCCATCTaGAGGCTGCATATGCCATGT +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRDTWAI*RLHMPC
Trigger: ACATGGCATATGCAGCCTCCAGATGGCCCATGTATC...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGAAGCTTATCAGGAGTCACAGTaGGGATCACACGAAGATTGG +
Preference number: 4 (lower is better)
Translates to: WVRSFSFHRGVFHFLYEAYQESQ*GSHEDW
Trigger: CCAATCTTCGTGTGATCCCCACTGTGACTCCTGATA...AGCTTCATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGAAGAGAGGATCTTTGTaGCCATCCTTCTCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMKRGSL*PSFSLR
Trigger: ACGAAGGGAGAAGGATGGCCACAAAGATCCTCTCTT...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGGCGGAGTACTGTGGATaGAATAGGCAGGTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKAEYCG*NRQVGS
Trigger: CGACCCAACCTGCCTATTCCATCCACAGTACTCCGC...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACCTACTAGTGTCACTCTaGAAGGAACTAGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHLLVSL*KELEVH
Trigger: ATGGACCTCTAGTTCCTTCCAGAGTGACACTAGTAG...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACCAAGCACCAAGGTTTTaGGAGAATCTAACGGAAACC +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHQAPRF*ENLTET
Trigger: GGTTTCCGTTAGATTCTCCCAAAACCTTGGTGCTTG...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGCGCAACAGCTCATCATaGCAACTGATATGGGGACTA +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLRNSSS*QLIWGL
Trigger: TAGTCCCCATATCAGTTGTCATGATGAGCTGTTGCG...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTCTTGTTTTCAATCTCTaGGGCAAAAGCAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEILVFNL*GKSSNS
Trigger: GCTATTGCTGCTTTTGCCTCAGAGATTGAAAACAAG...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTCCAGCCCTATTGTCTTaGGCAAGTCATGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIPALLS*ASHGSS
Trigger: CGAAGATCCATGACTTGCTCAAGACAATAGGGCTGG...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTGTGCGTGCAGCCAATTaGCTAATCTCTGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVVRAAN*LISATP
Trigger: TGGAGTAGCAGAGATTAGTCAATTGGCTGCACGCAC...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTCTGGTCCTGAAATATaGCCCACTGGATGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVISGPEI*PTGWSD
Trigger: GTCTGACCATCCAGTGGGTCATATTTCAGGACCAGA...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAATTATATCTTATGAGTaGTGGAATGGACACCTGGAC +
Preference number: 4 (lower is better)
Translates to: SGWPVKEMELEMSTNGFEIISYE*WNGHLD
Trigger: GTCCAGGTGTCCATTCCATCACTCATAAGATATAAT...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTTAATTCCCAAGATCTaGGCCACTTTGTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEILIPKI*ATLSSS
Trigger: TGAACTGGACAAAGTGGCTCAGATCTTGGGAATTAA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTAGTAGAAGAGGTGTCTaGACTTTTGGTTCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEISRRGV*TFGSRE
Trigger: CTCTCTAGAACCAAAAGTTCAGACACCTCTTCTACT...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCCTGGCAATGAACCATaGATAAGCCTTACCGATTTG +
Preference number: 4 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAPGNEP*ISLTDL
Trigger: CAAATCGGTAAGGCTTATTCATGGTTCATTGCCAGG...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCATCTGCTCCTGGCAATaGACCATGAATAAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAICSWQ*TMNKPY
Trigger: GTAAGGCTTATTCATGGTTCATTGCCAGGAGCAGAT...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGTCTCCCTTCGTTTCTTaGGCAGCATTTCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMSPFVS*AAFLLV
Trigger: AACAAGGAGAAATGCTGCGCAAGAAACGAAGGGAGA...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATATGGTGTTGCAGTCTTTaGACCAGTGATTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSIWCCSL*TSDCQH
Trigger: ATGCTGGCAATCACTGGTGCAAAGACTGCAACACCA...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAAACTCAGAGCCTTTTaGAGGAACAGTTATCTTGTC +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGKLRAF*RNSYLV
Trigger: GACAAGATAACTGTTCCTGCAAAAGGCTCTGAGTTT...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGACAACTCCTCTTGGGATaGACTGCTGTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRQLLLG*TAVQRR
Trigger: TCTCCTTTGAACAGCAGTGCATCCCAAGAGGAGTTG...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACTTGTTTCATAAGGCCTaGTTTGGCACAACCTTGTCA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHLFHKA*FGTTLS
Trigger: TGACAAGGTTGTGCCAAAGCAGGCCTTATGAAACAA...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTGCTGTGGGGTCCAATaGTGGTACTTACTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVICCGVQ*WYLLPH
Trigger: ATGAGGGAGTAAGTACCAGCATTGGACCCCACAGCA...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTAGTTGGGGATCTATGTaGTGGGCTTACCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVISWGSM*WAYPSS
Trigger: ACTACTCGGGTAAGCCCAGCACATAGATCCCCAACT...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATTGTCTTCAATTACCTaGTCCCTTGGAGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRLSSIT*SLGGDL
Trigger: AAGGTCCCCTCCAAGGGAGCAGGTAATTGAAGACAA...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp ATGCTAAATAAGGTGAGGAGTGGCAAGTCTAAAATACATACCCTCTATGTACATGGGGGCAGAAATGTCTaGTGCAGTCCTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: MLNKVRSGKSKIHTLYVHGGRNV*CSPSFW
Trigger: CCAAAAGGAAGGACTGCAGCAGACATTTCTGCCCCC...ATGTACATAGAGGGTATGTATTTTAGACTTGCCACTCCTCACCTTATTTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACGTCTTGAGCAAGTCATaGATCTTCGCATATTCTGGA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHVLSKS*IFAYSG
Trigger: TCCAGAATATGCGAAGATCCATGACTTGCTCAAGAC...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGGTCTTGAGCAAGTCATaGATCTTCGCATATTCTGGA +
Preference number: 4 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGVLSKS*IFAYSG
Trigger: TCCAGAATATGCGAAGATCCATGACTTGCTCAAGAC...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTGGATGGGACACCTCTaGAGAGTGGGTATTGCTATG +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIWMGHL*RVGIAM
Trigger: CATAGCAATACCCACTCTCCAGAGGTGTCCCATCCA...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACATAACCTTTTGCTTCTaGGAAGCACGGTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHITFCF*EARFFS
Trigger: TGAGAAGAACCGTGCTTCCCAGAAGCAAAAGGTTAT...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACACTTTTGATTCCTTGTTaGAGGAGGAGTTTGAGAACG +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTLLIPC*RRSLRT
Trigger: CGTTCTCAAACTCCTCCTCCAACAAGGAATCAAAAG...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCTGTCAGTGCGCTTTATaGCATCTTGCTTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSCQCAL*HLAWPH
Trigger: GTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACA...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCAGACTCTTTAACCACTaGCAGAGGTTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCRLFNH*QRFSSG
Trigger: ACCACTGCTAAACCTCTGCCAGTGGTTAAAGAGTCT...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAACTGTTAACTCTGGATaGACATCTTGTAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTTVNSG*TSCSSS
Trigger: ACTGGAGCTACAAGATGTCCATCCAGAGTTAACAGT...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTAAACCCAGAAAAAGATaGGATTGGTTCGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIKPRKR*DWFEVS
Trigger: GCTGACTTCGAACCAATCCCATCTTTTTCTGGGTTT...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTTGCCACCTCTGTGGTaGATGCATTCGATATTTCTA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEILPPLW*MHSIFL
Trigger: TAGAAATATCGAATGCATCCACCACAGAGGTGGCAA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGAATTGCCACCTCTGTaGTGGATGCATTCGATATTT +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIELPPL*WMHSIF
Trigger: AAATATCGAATGCATCCACCACAGAGGTGGCAATTC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATAGGTCATTGCCAACAGTaGTCCTTAAGCTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSIGHCQQ*SLSSFP
Trigger: TGGAAAAGAGCTTAAGGATCACTGTTGGCAATGACC...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTACTGGGAGCTTCGAGTaGAGACAGAATCATCAGTCA +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVITGSFE*RQNHQS
Trigger: TGACTGATGATTCTGTCTTCACTCGAAGCTCCCAGT...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTGCTCATCATGACAACTaGTATGGGGACTATAATCAG +
Preference number: 4 (lower is better)
Translates to: QSRRWNWKCPLMGSKLLFAHHDN*YGDYNQ
Trigger: CTGATTATAGTCCCCATATCAGTTGTCATGATGAGC...AAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCGATGTAAAACTTGGGTaGTCCCCTCCCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSDVKLG*SPPMLF
Trigger: AAACAGCATGGGAGGGGATCACCCAAGTTTTACATC...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGTTCCAAATTTTTCTCTaGGAGGACTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGFQIFL*EDCCLW
Trigger: CCAAAGACAACAGTCCTCTCAGAGAAAAATTTGGAA...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGATATTGTGCATATGAGTaGAGAAATCAAACATGGTCC +
Preference number: 4 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGYCAYE*RNQTWS
Trigger: GGACCATGTTTGATTTCTTCACTCATATGCACAATA...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTTCTCATTGTGTTGGTaGCCCTTCACATGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVFSLCW*PFTCCS
Trigger: GGAGCAACATGTGAAGGGTCACCAACACAATGAGAA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAAGATACAACTGGGTTTaGTTTTACTGGAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RTMHLKKGNRVREVQELTRYNWV*FYWSQD
Trigger: ATCTTGGCTCCAGTAAAATCAAACCCAGTTGTATCT...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGCCAGGGCTGAGAGTCTaGGATACAACTGGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKPGLRV*DTTGFD
Trigger: ATCAAACCCAGTTGTATCTCAGACTCTCAGCCCTGG...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCACCAAACCCTCATCTTaGTGCAACTCCTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSTKPSS*CNSSWD
Trigger: ATCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGGT...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCCTGTGGACTCAATTTaGTCACTACTTTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCPVDSI*SLLYLE
Trigger: CTCCAAGTAAAGTAGTGATCAAATTGAGTCCACAGG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGACTCCTGGGATTAGGTaGGTTTCGTTCACCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKTPGIR*VSFTLC
Trigger: ACAGAGGGTGAACGAAACTCACCTAATCCCAGGAGT...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCTGTTCAGGCATTCCCTaGGGGACCATATTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSCSGIP*GTILSS
Trigger: TGAAGACAATATGGTCCCTCAGGGAATGCCTGAACA...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCGGTGTAGGTTCCAGATaGGATAACAAACTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAGVGSR*DNKLVL
Trigger: CAAGACTAGTTTGTTATCTCATCTGGAACCTACACC...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTGGTGATCCCCTCCCATaGTGTTTATCTTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVGDPLP*CLSSLC
Trigger: ACACAGTGAAGATAAACAGCATGGGAGGGGATCACC...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGACTTCCTCAGGCCGATaGAAAGAATATCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKTSSGR*KEYPGS
Trigger: GGAGCCAGGATATTCTTTGCATCGGCCTGAGGAAGT...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp ACTAATGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGGAAAAACTCTCAAGCTaGATGGAGGGCTCCATTATG +
Preference number: 4 (lower is better)
Translates to: TNGFEASLSIEESFISSMEKLSS*MEGSIM
Trigger: CATAATGGAGCCCTCCATGCAGCTTGAGAGTTTTTC...CATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCATTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCAGGGAGCTTGCCTTCTaGCTCATAACTTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSRELAF*LITSLS
Trigger: TGAGAGTGAAGTTATGAGGCAGAAGGCAAGCTCCCT...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCTCTTCAATAACCTTTTaGTTCTGGGAAGCACGGTTC +
Preference number: 4 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFSSITF*FWEARF
Trigger: GAACCGTGCTTCCCAGAAGCAAAAGGTTATTGAAGA...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTGGTGTTGCAGTCTTTaGACCAGTGATTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVWCCSL*TSDCQH
Trigger: ATGCTGGCAATCACTGGTGCAAAGACTGCAACACCA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGATTTTGATAGGCTTTaGCTTCCCAGCTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPDFDRL*LPSFSF
Trigger: AAAACTGAAGCTGGGAAGGCAAAGCCTATCAAAATC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCCTCTTCCCCTCCAAATaGTTTGGAGATGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSLFPSK*FGDDVW
Trigger: CCAGACATCATCTCCAAAGCATTTGGAGGGGAAGAG...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp CAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTGAAGACTTTTGGAATTaGCCCTGTGTGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: QSRRWNWKCPLMGSKLLFEDFWN*PCVCFL
Trigger: TAAGAAGCACACACAGGGGCAATTCCAAAAGTCTTC...AAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAGTGCTAACACAGAAGTaGTCATTGCCAACAGTGATC +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRVLTQK*SLPTVI
Trigger: GATCACTGTTGGCAATGACCACTTCTGTGTTAGCAC...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGATAACCTTTTGCTTCTaGGAAGCACGGTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMITFCF*EARFFS
Trigger: TGAGAAGAACCGTGCTTCCCAGAAGCAAAAGGTTAT...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCTTATGGCATCTTGCTTaGCCTCACTCTGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSLWHLA*PHSGSL
Trigger: CAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAA...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCCAGGCATCCAAGGGCTaGTATGTGCAACAACAGTTT +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSQASKG*YVQQQF
Trigger: AAACTGTTGTTGCACATACCAGCCCTTGGATGCCTG...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGAAGCTAAATCTGAAGACTTTTaGAATTGCCCCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: WVRSFSFHRGVFHFLYEAKSEDF*NCPCVC
Trigger: GCACACACAGGGGCAATTCCAAAAGTCTTCAGATTT...AGCTTCATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTCCATACTTCTCCTGGGCTTTTaGAACAGGCAGAGCTATAAA +
Preference number: 4 (lower is better)
Translates to: KEMELEMSTNGFEASLSILLLGF*NRQSYK
Trigger: TTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAG...TATGGAAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp ACTAATGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGATAGTTGCGAGTTCCTaGTGTAAAACTTGGGTGATC +
Preference number: 4 (lower is better)
Translates to: TNGFEASLSIEESFISSMIVASS*CKTWVI
Trigger: GATCACCCAAGTTTTACATCAGGAACTCGCAACTAT...CATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGCTTGTTTTCAATCTCTaGGGCAAAAGCAGCAATAGC +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLLVFNL*GKSSNS
Trigger: GCTATTGCTGCTTTTGCCTCAGAGATTGAAAACAAG...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGTTAATTCCCAAGATCTaGGCCACTTTGTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLLIPKI*ATLSSS
Trigger: TGAACTGGACAAAGTGGCTCAGATCTTGGGAATTAA...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp ACTCACCATTTCCTGGCAGCTAAAATGACAGGATCTTCTCTACAACTTATCCCCTATTGTGCATATGAGTaGAGAAATCAAACATGGTCC +
Preference number: 4 (lower is better)
Translates to: THHFLAAKMTGSSLQLIPYCAYE*RNQTWS
Trigger: GGACCATGTTTGATTTCTTCACTCATATGCACAATA...GGGGATAAGTTGTAGAGAAGATCCTGTCATTTTAGCTGCCAGGAAATGGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTATTTGTTCAGGTAAATaGGATGGCTCACTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIICSGK*DGSLFS
Trigger: TGAAAAGAGTGAGCCATCTCATTTACCTGAACAAAT...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGTTTTGGCTTGTTCACTaGACACACTTGAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKFWLVH*THLRGV
Trigger: CACCCCTCTCAAGTGTGTTCAGTGAACAAGCCAAAA...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTTGGAAGCCTAAGAGATaGACAATTCTTCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIWKPKR*TILPSF
Trigger: AAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCA...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCTTCCCAAATCCAAAATaGTTGGGCTTTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFFPNPK*LGFSSS
Trigger: AGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAA...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR TCA 90 bp TGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGAAGCTCTTTCATTTCCTCTATaGAGCTCAAGGTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: WVRSFSFHRGVFHFLYEALSFPL*SSRSQN
Trigger: ATTCTGTGACCTTGAGCTTCATAGAGGAAATGAAAG...AGCTTCATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR GCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGCGCAGAGACTCTTTCTaGTTAGGCTTATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKRRDSF*LGLSGV
Trigger: GACTCCTGATAAGCCTAAGCAGAAAGAGTCTCTGCG...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATCTTCAATAACCTTTTaGTTCTGGGAAGCACGGTTC +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRSSITF*FWEARF
Trigger: GAACCGTGCTTCCCAGAAGCAAAAGGTTATTGAAGA...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGACAGTTATCTTGTCAGTaGGCTTTATGGCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRQLSCQ*ALWHLA
Trigger: AGCAAGATGCCATAAAGCGCACTGACAAGATAACTG...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCCCAGCTTCAGTTTTaGCATCCTCTTTGTCCTTAC +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVSQLQF*HPLCPY
Trigger: GTAAGGACAAAGAGGATGGCAAAACTGAAGCTGGGA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCAGTCTTCTAGGGCCTTaGTTTCTATTGTCACTGTTA +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCSLLGP*FLLSLL
Trigger: TAACAGTGACAATAGAAAGCAAGGCCCTAGAAGACT...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCAGCTTGTTTGGTTATTaGCATTATCCTGTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFSLFGY*HYPVWF
Trigger: GAACCACACAGGATAATGCCAATAACCAAACAAGCT...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCCAAAGTGTCTGTCTTTaGGGTAATTGTTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPQSVCL*GNCFIR
Trigger: CCTTATGAAACAATTACCCCAAAGACAGACACTTTG...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCAAGCTCACTCTTCTCTaGAGATATATCCCTACTAGT +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCKLTLL*RYIPTS
Trigger: ACTAGTAGGGATATATCTCCAGAGAAGAGTGAGCTT...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATGGCTTTCCTTATCCTaGTTAACAGATTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRWLSLS*LTDSLR
Trigger: CCTCAGAGAATCTGTTAACCAGGATAAGGAAAGCCA...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCAATCATTAGCAAGTTaGGCTGTTTTACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCQSLAS*AVLLLP
Trigger: AGGGAGAAGTAAAACAGCCCAACTTGCTAATGATTG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAACCTGGCTCAGAGAGTaGAGAACACAGTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRTWLRE*RTQFIF
Trigger: AAAGATAAACTGTGTTCTCCACTCTCTGAGCCAGGT...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCGCTCATCATGACAACTaGTATGGGGACTATAATCAG +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSAHHDN*YGDYNQ
Trigger: CTGATTATAGTCCCCATATCAGTTGTCATGATGAGC...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTATAGTTGCGAGTTCCTaGTGTAAAACTTGGGTGATC +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIIVASS*CKTWVI
Trigger: GATCACCCAAGTTTTACATCAGGAACTCGCAACTAT...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGTCTTCACACACTTTCTaGCACAAGACAGTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKSSHTF*HKTVGD
Trigger: ATCCCCAACTGTCTTGTGTCAGAAAGTGTGTGAAGA...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCGATCATCTGGGCATCTaGTTTCTAGAAGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSDHLGI*FLEAND
Trigger: ATCATTGGCTTCTAGAAATCAGATGCCCAGATGATC...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTGTGGAACAGGGAATaGGTTCAATCTCAAGACAAG +
Preference number: 4 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVILWNRE*VQSQDK
Trigger: CTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAA...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGACTTTGCACCAGTGATTaGCAGCATCATAATACTCAT +
Preference number: 4 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRLCTSD*QHHNTH
Trigger: ATGAGTATTATGATGCTGGCAATCACTGGTGCAAAG...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp ATTTATTCAATGCTAAATAAGGTGAGGAGTGGCAAGTCTAAAATACATACCCTCTGGTGTTGCAGTCTTTaGACCAGTGATTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: IYSMLNKVRSGKSKIHTLWCCSL*TSDCQH
Trigger: ATGCTGGCAATCACTGGTGCAAAGACTGCAACACCA...GAGGGTATGTATTTTAGACTTGCCACTCCTCACCTTATTTAGCATTGAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR GCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCACAACTGAAACTCCTTaGTCTTGTGGACTACCTGTT +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSTTETP*SCGLPV
Trigger: AACAGGTAGTCCACAAGAGCAAGGAGTTTCAGTTGT...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR GCA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCAAGAGCTACTCACGCTaGATTTCAAACAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAKSYSR*ISNNVK
Trigger: CTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTT...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCTCGCATATTCTGGATTaGTCTCTTCTAGTGATTCTA +
Preference number: 4 (lower is better)
Translates to: TVNKRATHAAFQTMLRQASHILD*SLLVIL
Trigger: TAGAATCACTAGAAGAGACCAATCCAGAATATGCGA...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp CAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAGCTTCTCTTTTCGCATATTCTGGATTaGTCTCTTCTAGTGATTCTA +
Preference number: 4 (lower is better)
Translates to: QSRRWNWKCPLMGSKLLFSHILD*SLLVIL
Trigger: TAGAATCACTAGAAGAGACCAATCCAGAATATGCGA...AAAGAGAAGCTTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTGATTTACGGAGCTCTTaGCTTTCCTTATCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVDLRSS*LSLSWL
Trigger: TAACCAGGATAAGGAAAGCCAAGAGCTCCGTAAATC...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTTCCAAACAGGTTTGTaGGTTAGCAGGACAATGCAT +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVFQTGL*VSRTMH
Trigger: ATGCATTGTCCTGCTAACCCACAAACCTGTTTGGAA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTTCCAAATTTTTCTCTaGGAGGACTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVFQIFL*EDCCLW
Trigger: CCAAAGACAACAGTCCTCTCAGAGAAAAATTTGGAA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCATTATATCTTATGAGTaGTGGAATGGACACCTGGAC +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSIISYE*WNGHLD
Trigger: GTCCAGGTGTCCATTCCATCACTCATAAGATATAAT...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp AAATACATACCCTCTATGTACATTCTAATCTTGTTCATCCTCTACAGGTACAACTCCTGGCAGCTAAAATaGCAGGATCTTCTCTACAAC +
Preference number: 4 (lower is better)
Translates to: KYIPSMYILILFILYRYNSWQLK*QDLLYN
Trigger: GTTGTAGAGAAGATCCTGTCATTTTAGCTGCCAGGA...GTTGTACCTGTAGAGGATGAACAAGATTAGAATGTACATAGAGGGTATGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR CCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTAGCTTGTTTGGTTATTaGCATTATCCTGTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVSLFGY*HYPVWF
Trigger: GAACCACACAGGATAATGCCAATAACCAAACAAGCT...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTACCTCTTCTTTTAACTaGAGTTTGATGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVTSSFN*SLMPVF
Trigger: GAACACTGGCATCAAACTCCAGTTAAAAGAAGAGGT...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGGAAAGAGCAAGCCTGTaGACTCAATTTGATCACTAC +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKERASL*TQFDHY
Trigger: GTAGTGATCAAATTGAGTCCACAGGCTTGCTCTTTC...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR TCA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCCTTTTAACTGGAGTTTaGTGCCAGTGTTCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSLLTGV*CQCSFY
Trigger: ATAAAAGGAACACTGGCATCAAACTCCAGTTAAAAG...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CCA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGCCCACATTTCAGAAATaGCAGAGTCAAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKPTFQK*QSQSQN
Trigger: ATTTTGGCTTTGACTCTGCCATTTCTGAAATGTGGG...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp CTGCGGCCGCTGCGCGGGCCGCCCCCGCCGTCGTCTTTAGGCCGGTaGGAAGAGACGGAGGAGCGAGCGCTGCTGCGGTACATGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LRPLRGPPPPSSLGR*EETEERALLRYMVL
Trigger: AAGAACCATGTACCGCAGCAGCGCTCGCTCCTCCGTCTCTTCCCACCGGCCTAAAGACGACGGCGGGGGCGGCCCGCGCAGCGGCCGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 90 bp AGTATGGCCTCCCATTGTGCTCTGCATGCCCGCCAGGGGACAGGATaGTGTGGCAGCGCTCACATTTCAGGCAGAAGCGGTGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SMASHCALHARQGTG*CGSAHISGRSGASS
Trigger: AGAACTGGCACCGCTTCTGCCTGAAATGTGAGCGCTGCCACAGCATCCTGTCCCCTGGCGGGCATGCAGAGCACAATGGGAGGCCATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607252.5
CDS CCA 90 bp CTCAGAATGCGGGAAAAACCACTGCCATCCTGGCTAGCTCTCTCATaGGGCAGCAGGAAGTCTGTGTGTCGCTCAGGTCCCTCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LRMREKPLPSWLALS*GSRKSVCRSGPSAF
Trigger: GAAGGCTGAGGGACCTGAGCGACACACAGACTTCCTGCTGCCCCATGAGAGAGCTAGCCAGGATGGCAGTGGTTTTTCCCGCATTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp CTCTGCCGTCGCCGTTCTGTCTCTAGGACCACAGCCAAGCCAGCTTaGCGGTCCAGATTCCGCCGCTCCTCATATAATGGGTTTTCATCC +
Preference number: 5 (lower is better)
Translates to: LCRRRSVSRTTAKPA*RSRFRRSSYNGFSS
Trigger: GGATGAAAACCCATTATATGAGGAGCGGCGGAATCTGGACCGCCAAGCTGGCTTGGCTGTGGTCCTAGAGACAGAACGGCGACGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 90 bp GAAGGTGGGTGTGGATGGGACACCTCTGGAGAGTGGGTATTGCTATaGTGTGCCTCCCTGCTCTCTAGTCTGTGGGGATCTGAGGAACGT +
Preference number: 5 (lower is better)
Translates to: EGGCGWDTSGEWVLL*CASLLSSLWGSEER
Trigger: ACGTTCCTCAGATCCCCACAGACTAGAGAGCAGGGAGGCACATCATAGCAATACCCACTCTCCAGAGGTGTCCCATCCACACCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp GAAGGGATGGGTGCCCAGAGTAGAGAGGGTGATCCTGGCTGGAGCTaGTACTGCTGGAAAAACTCTCAAGCTGCATGGAGGGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: EGMGAQSREGDPGWS*YCWKNSQAAWRAPL
Trigger: TAATGGAGCCCTCCATGCAGCTTGAGAGTTTTTCCAGCAGTACCAGCTCCAGCCAGGATCACCCTCTCTACTCTGGGCACCCATCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp CTTGAGAGGGGTGGTGGAGGACGTACTAACACAGAGAACAGGGTCTaGTCTCGGTCACTCTCACTCACCCCAGGAGCTGTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: LERGGGGRTNTENRV*SRSLSLTPGAVSSE
Trigger: TTCTGATGAGACAGCTCCTGGGGTGAGTGAGAGTGACCGAGACCAGACCCTGTTCTCTGTGTTAGTACGTCCTCCACCACCCCTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 90 bp ATCAGTCAGGTCATCCCTGTCCATGTCTTCCAGATTATCCACTGGTaGCCCCAGCCGATCACTAAGCCGTCGCCGTTCTGGTGTGCTAAC +
Preference number: 5 (lower is better)
Translates to: ISQVIPVHVFQIIHW*PQPITKPSPFWCAN
Trigger: GTTAGCACACCAGAACGGCGACGGCTTAGTGATCGGCTGGGGTCACCAGTGGATAATCTGGAAGACATGGACAGGGATGACCTGACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 90 bp CACCCCAGGAGCTGTCTCATCAGAAGGAATGGCAGCTGGCTGTGCTaGGGCCATGATGGCTACAGGCAACACTGGGTTCAAAATGTTAGG +
Preference number: 5 (lower is better)
Translates to: HPRSCLIRRNGSWLC*GHDGYRQHWVQNVR
Trigger: CCTAACATTTTGAACCCAGTGTTGCCTGTAGCCATCATGGCCTCAGCACAGCCAGCTGCCATTCCTTCTGATGAGACAGCTCCTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 90 bp GATGGGACACCTCTGGAGAGTGGGTATTGCTATGATGTGCCTCCCTaGTCTCTAGTCTGTGGGGATCTGAGGAACGTCGATCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: DGTPLESGYCYDVPP*SLVCGDLRNVDQLR
Trigger: TCTCAGCTGATCGACGTTCCTCAGATCCCCACAGACTAGAGAGCAGGGAGGCACATCATAGCAATACCCACTCTCCAGAGGTGTCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 90 bp CACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTTCTATCCCTaGCTTTCTGGGGGCAGAAATGTCTGCTGCAGTCCTTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: HKGTHHFRGLCGFYP*LSGGRNVCCSPSFW
Trigger: CCAAAAGGAAGGACTGCAGCAGACATTTCTGCCCCCAGAAAGGCAGGGATAGAAACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000605935.5
ENST00000606599.1
ENST00000607252.5
CDS CCA 90 bp GGCCCTTCCTCCTGGGAAATATATCGCTCAAGACCCCGAGAGCACTaGGAGCTTCGAGTGAAGACAGAATCATCAGTCAGGTCATCCCTG +
Preference number: 5 (lower is better)
Translates to: GPSSWEIYRSRPREH*ELRVKTESSVRSSL
Trigger: CAGGGATGACCTGACTGATGATTCTGTCTTCACTCGAAGCTCCCAGTGCTCTCGGGGTCTTGAGCGATATATTTCCCAGGAGGAAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp TCCTCATCAAGTTGTCCCAAGAAGGGACTGAGAGGCCCTTCCTCCTaGGAAATATATCGCTCAAGACCCCGAGAGCACTGGGAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: SSSSCPKKGLRGPSS*EIYRSRPREHWELR
Trigger: TCGAAGCTCCCAGTGCTCTCGGGGTCTTGAGCGATATATTTCCCAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGACAACTTGATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp GAATCAGCCAACATGCTCAGAATGCGGGAAAAACCACTGCCATCCTaGCTAGCTCTCTCATGGGGCAGCAGGAAGTCTGTGTGTCGCTCA +
Preference number: 5 (lower is better)
Translates to: ESANMLRMREKPLPS*LALSWGSRKSVCRS
Trigger: TGAGCGACACACAGACTTCCTGCTGCCCCATGAGAGAGCTAGCCAGGATGGCAGTGGTTTTTCCCGCATTCTGAGCATGTTGGCTGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp CTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATTTCCGTaGCCTCTGTGGTTTCTATCCCTGCCTTTCTGGGGGCAGAAATGT +
Preference number: 5 (lower is better)
Translates to: LQVIAYWPQGHPSFP*PLWFLSLPFWGQKC
Trigger: ACATTTCTGCCCCCAGAAAGGCAGGGATAGAAACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000605935.5
ENST00000606599.1
ENST00000607252.5
CDS-3UTR CAA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGACACAGCCAAGCCAGCTaGGCGGTCCAGATTCCGCCG +
Preference number: 5 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGHSQAS*AVQIPP
Trigger: CGGCGGAATCTGGACCGCCAAGCTGGCTTGGCTGTG...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 90 bp ACAGGCACTTGGGCCGCAGGAATTGAGCCTCGCAGAGACTCTTTCTaGTTAGGCTTATCAGGAGTCACAGTGGGGATCACACGAAGATTG +
Preference number: 5 (lower is better)
Translates to: TGTWAAGIEPRRDSF*LGLSGVTVGITRRL
Trigger: CAATCTTCGTGTGATCCCCACTGTGACTCCTGATAAGCCTAAGCAGAAAGAGTCTCTGCGAGGCTCAATTCCTGCGGCCCAAGTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 90 bp TTCTCCTCCTTTGGTTTCTCACTAAGTTTGCGCTTTAGCTCACTCTaGCGTCGCCGTTCTGTCTCTAGGACCACAGCCAAGCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: FSSFGFSLSLRFSSL*RRRSVSRTTAKPAW
Trigger: CCAAGCTGGCTTGGCTGTGGTCCTAGAGACAGAACGGCGACGGCAGAGTGAGCTAAAGCGCAAACTTAGTGAGAAACCAAAGGAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp AATATCCTGGCTCCGATGCTGTTAGGACACCTGACAATCCAGGGATaGAACAGCCAGTACCACCACCATCAACTCCAACCAGCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: NILAPMLLGHLTIQG*NSQYHHHQLQPAPD
Trigger: GTCAGGAGCTGGTTGGAGTTGATGGTGGTGGTACTGGCTGTTCCATCCCTGGATTGTCAGGTGTCCTAACAGCATCGGAGCCAGGATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp CATATGCCATGTAGTGCCTATAGGCATCAAAAGAGGCAGGGGGAATaGCAGGTCCCTGGTAGTTCGGAGGTATCCGAGCTGCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: HMPCSAYRHQKRQGE*QVPGSSEVSELQQT
Trigger: AGTTTGCTGCAGCTCGGATACCTCCGAACTACCAGGGACCTGCCATTCCCCCTGCCTCTTTTGATGCCTATAGGCACTACATGGCATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp GTGGTTCAGGTACAGGGTGGTTTGACGGTTGAGAGGTGGGATACATaGGCCATCTGGAGGCTGCATATGCCATGTAGTGCCTATAGGCAT +
Preference number: 5 (lower is better)
Translates to: VVQVQGGLTVERWDT*AIWRLHMPCSAYRH
Trigger: ATGCCTATAGGCACTACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTACCTGAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp TTATCCTGTGTGGTTCAGGTACAGGGTGGTTTGACGGTTGAGAGGTaGGATACATGGGCCATCTGGAGGCTGCATATGCCATGTAGTGCC +
Preference number: 5 (lower is better)
Translates to: LSCVVQVQGGLTVER*DTWAIWRLHMPCSA
Trigger: GGCACTACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTACCTGAACCACACAGGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 90 bp GTCAGTGCGCTTTATGGCATCTTGCTTGGCCTCACTCTGGGTCTTTaGAGCCCAAGGTCTGTTGTAGGGATCCAGTGTCTGTGTGTGCTT +
Preference number: 5 (lower is better)
Translates to: VSALYGILLGLTLGL*SPRSVVGIQCLCVL
Trigger: AAGCACACACAGACACTGGATCCCTACAACAGACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 90 bp GGCACAACCTTGTCAGAGGCTGTAGGAAGCCATAGGTGCTGCCTGTaGTTTTTGGGCCTACATGTTCTACAACTGACCATTTCCCTAGGG +
Preference number: 5 (lower is better)
Translates to: GTTLSEAVGSHRCCL*FLGLHVLQLTISLG
Trigger: CCCTAGGGAAATGGTCAGTTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGCACCTATGGCTTCCTACAGCCTCTGACAAGGTTGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp GTACAGGGTGGTTTGACGGTTGAGAGGTGGGATACATGGGCCATCTaGAGGCTGCATATGCCATGTAGTGCCTATAGGCATCAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: VQGGLTVERWDTWAI*RLHMPCSAYRHQKR
Trigger: CCTCTTTTGATGCCTATAGGCACTACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp TCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTGATTGCCTACTaGCCACAAGGGCACCCATCATTTCCGTGGCCTCTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: SYPPSGSQILQVIAY*PQGHPSFPWPLWFL
Trigger: TAGAAACCACAGAGGCCACGGAAATGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS-3UTR CAA 90 bp TCTGGAAGTCAGATCCTTCAGGTGATTGCCTACTGGCCACAAGGGCACCCATCATCTCTGAGAGGACTGTaGTCTTTGGGAATCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SGSQILQVIAYWPQGHPSSLRGL*SLGIPG
Trigger: TCCTGGGATTCCCAAAGACAACAGTCCTCTCAGAGA...TGATGGGTGCCCTTGTGGCCAGTAGGCAATCACCTGAAGGATCTGACTTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS TCA 90 bp GGGAAATATATCGCTCAAGACCCCGAGAGCACTGGGAGCTTCGAGTaGAGACAGAATCATCAGTCAGGTCATCCCTGTCCATGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: GKYIAQDPESTGSFE*RQNHQSGHPCPCLP
Trigger: TGGAAGACATGGACAGGGATGACCTGACTGATGATTCTGTCTTCACTCGAAGCTCCCAGTGCTCTCGGGGTCTTGAGCGATATATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 90 bp TCTGCCTCTTGCCGTAGCTCTGCAATGTCCTTCATAATGTTATCCTaGAGCCGACTCACCTCCACCAAGAGAGGATCTTTGTGGCCATCC +
Preference number: 5 (lower is better)
Translates to: SASCRSSAMSFIMLS*SRLTSTKRGSLWPS
Trigger: GGATGGCCACAAAGATCCTCTCTTGGTGGAGGTGAGTCGGCTTCAGGATAACATTATGAAGGACATTGCAGAGCTACGGCAAGAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 90 bp ATAATACTCATAAGCAGCAGTGGGCTGATCCAACTGCTTAGTGGCTaGCTGGGGGCTTTCGGCAGGCTTGGGGCTCTTAGTACGAAACTT +
Preference number: 5 (lower is better)
Translates to: IILISSSGLIQLLSG*LGAFGRLGALSTKL
Trigger: AAGTTTCGTACTAAGAGCCCCAAGCCTGCCGAAAGCCCCCAGTCAGCCACTAAGCAGTTGGATCAGCCCACTGCTGCTTATGAGTATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 90 bp AGGACCCACGAAGCCAGGGCTGAGAGTCTGAGATACAACTGGGTTTaGTTTTACTGGAGCCAAGATAGCATTTGCTTGAGCAGCAGACGG +
Preference number: 5 (lower is better)
Translates to: RTHEARAESLRYNWV*FYWSQDSICLSSRR
Trigger: CCGTCTGCTGCTCAAGCAAATGCTATCTTGGCTCCAGTAAAATCAAACCCAGTTGTATCTCAGACTCTCAGCCCTGGCTTCGTGGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp GGATTATATCTTATGAGTGATGGAATGGACACCTGGACAGGCACTTaGGCCGCAGGAATTGAGCCTCGCAGAGACTCTTTCTGCTTAGGC +
Preference number: 5 (lower is better)
Translates to: GLYLMSDGMDTWTGT*AAGIEPRRDSFCLG
Trigger: GCCTAAGCAGAAAGAGTCTCTGCGAGGCTCAATTCCTGCGGCCCAAGTGCCTGTCCAGGTGTCCATTCCATCACTCATAAGATATAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS-3UTR CAA 90 bp TTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCCTCCTTCTGTGCGGTACATGGTTCTaGCAGCGGCGGCCACGGCGA +
Preference number: 5 (lower is better)
Translates to: FGTGRAIKRLFVISTLLLCGTWF*QRRPRR
Trigger: TCGCCGTGGCCGCCGCTGCAAGAACCATGTACCGCA...CAGAAGGAGGGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGAGGAAGGGGACCCCATaGGTAGAGGTTGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGRKGTP*VEVALR
Trigger: CCTCAGGGCAACCTCTACCAATGGGGTCCCCTTCCT...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp TGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGGGTGCGTGCAGCCAATaGACTAATCTCTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: WAFPLLLLGFWNRQSYKAGACSQ*TNLCYS
Trigger: GGAGTAGCAGAGATTAGTCAATTGGCTGCACGCACC...CGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp GATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAACTTGGGCCGCAGGAATaGAGCCTCGCAGAGACTCTT +
Preference number: 5 (lower is better)
Translates to: DWAFPLLLLGFWNRQSYKLGPQE*SLAETL
Trigger: AAGAGTCTCTGCGAGGCTCAATTCCTGCGGCCCAAG...TTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS TCA 90 bp TTTCTTTTGTTCGGTAGTCCTCATCAAGTTGTCCCAAGAAGGGACTaGGAGGCCCTTCCTCCTGGGAAATATATCGCTCAAGACCCCGAG +
Preference number: 5 (lower is better)
Translates to: FLLFGSPHQVVPRRD*EALPPGKYIAQDPE
Trigger: CTCGGGGTCTTGAGCGATATATTTCCCAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGACAACTTGATGAGGACTACCGAACAAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 90 bp AGGGACCATATTGTCTTCAATTACCTGCTCCCTTGGAGGGGACCTTaGCACTGGAGCTTTAACCAAATTCAGAGGGTCGCCACTGTCATC +
Preference number: 5 (lower is better)
Translates to: RDHIVFNYLLPWRGP*HWSFNQIQRVATVI
Trigger: GATGACAGTGGCGACCCTCTGAATTTGGTTAAAGCTCCAGTGTCAAGGTCCCCTCCAAGGGAGCAGGTAATTGAAGACAATATGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp GAGATCTTCTCTGGATTATATCTTATGAGTGATGGAATGGACACCTaGACAGGCACTTGGGCCGCAGGAATTGAGCCTCGCAGAGACTCT +
Preference number: 5 (lower is better)
Translates to: EIFSGLYLMSDGMDT*TGTWAAGIEPRRDS
Trigger: AGAGTCTCTGCGAGGCTCAATTCCTGCGGCCCAAGTGCCTGTCCAGGTGTCCATTCCATCACTCATAAGATATAATCCAGAGAAGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp ACTCAGAGCCTTTTGCAGGAACAGTTATCTTGTCAGTGCGCTTTATaGCATCTTGCTTGGCCTCACTCTGGGTCTTTGAAGCCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TQSLLQEQLSCQCAL*HLAWPHSGSLKPKV
Trigger: GACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACAAGATAACTGTTCCTGCAAAAGGCTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTGCGGTACATGGTTCTaGCAGCGGCGGCCACGGCGA +
Preference number: 5 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVCGTWF*QRRPRR
Trigger: TCGCCGTGGCCGCCGCTGCAAGAACCATGTACCGCA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCAGGAAGGGGACCCCATaGGTAGAGGTTGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: TVNKRATHAAFQTMLRQARKGTP*VEVALR
Trigger: CCTCAGGGCAACCTCTACCAATGGGGTCCCCTTCCT...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTCTTGGGCCGCAGGAATaGAGCCTCGCAGAGACTCTT +
Preference number: 5 (lower is better)
Translates to: FSKLSGVFPRDASTAQEILGPQE*SLAETL
Trigger: AAGAGTCTCTGCGAGGCTCAATTCCTGCGGCCCAAG...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTACAATTACCTGCTCCCTaGGAGGGGACCTTGACACTG +
Preference number: 5 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLQLPAP*EGTLTL
Trigger: CAGTGTCAAGGTCCCCTCCAAGGGAGCAGGTAATTG...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 90 bp CCTAGGACTTGGGCTTCTTCTACGCTGTCGATAGTTGCGAGTTCCTaGTGTAAAACTTGGGTGATCCCCTCCCATGCTGTTTATCTTCAC +
Preference number: 5 (lower is better)
Translates to: PRTWASSTLSIVASS*CKTWVIPSHAVYLH
Trigger: GTGAAGATAAACAGCATGGGAGGGGATCACCCAAGTTTTACATCAGGAACTCGCAACTATCGACAGCGTAGAAGAAGCCCAAGTCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 90 bp GAAGGGTCACCTGGCTCAGAGAGTGGAGAACACAGTTTATCTTTTTaGACTCCAGAGGTCCGTGTGACAAAGTCAACAAGGTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: EGSPGSESGEHSLSF*TPEVRVTKSTRSGR
Trigger: CCTTCCAGACCTTGTTGACTTTGTCACACGGACCTCTGGAGTTCAAAAAGATAAACTGTGTTCTCCACTCTCTGAGCCAGGTGACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 90 bp GCCATGAAGTCGTTCCTGGGTGCGTGCAGCCAATTGACTAATCTCTaGTACTCCAATATCCAGCCCTATTGTCTTGAGCAAGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: AMKSFLGACSQLTNL*YSNIQPYCLEQVMD
Trigger: ATCCATGACTTGCTCAAGACAATAGGGCTGGATATTGGAGTAGCAGAGATTAGTCAATTGGCTGCACGCACCCAGGAACGACTTCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp AGCCGATCACTAAGCCGTCGCCGTTCTGGTGTGCTAACACAGAAGTaGTCATTGCCAACAGTGATCCTTAAGCTCTTTTCCAAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SRSLSRRRSGVLTQK*SLPTVILKLFSKES
Trigger: TGACTCTTTGGAAAAGAGCTTAAGGATCACTGTTGGCAATGACCACTTCTGTGTTAGCACACCAGAACGGCGACGGCTTAGTGATCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp TTGCAGGAACAGTTATCTTGTCAGTGCGCTTTATGGCATCTTGCTTaGCCTCACTCTGGGTCTTTGAAGCCCAAGGTCTGTTGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: LQEQLSCQCALWHLA*PHSGSLKPKVCCRD
Trigger: ATCCCTACAACAGACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACAAGATAACTGTTCCTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp TTCTTCACACACTTTCTGACACAAGACAGTTGGGGATCTATGTGCTaGGCTTACCCGAGTAGTGCAGAAATCAACAGGCATATCCCCCAG +
Preference number: 5 (lower is better)
Translates to: FFTHFLTQDSWGSMC*AYPSSAEINRHIPQ
Trigger: CTGGGGGATATGCCTGTTGATTTCTGCACTACTCGGGTAAGCCCAGCACATAGATCCCCAACTGTCTTGTGTCAGAAAGTGTGTGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCAGGTACAGGGTGGTTaGACGGTTGAGAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGQVQGG*TVERWD
Trigger: ATCCCACCTCTCAACCGTCAAACCACCCTGTACCTG...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGATCACACGAAGATaGGGACGGCTACGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIGITRR*GRLRVA
Trigger: AGCTACTCGTAGCCGTCCCAATCTTCGTGTGATCCC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCGGGCTTTCGGCAGGCTaGGGGCTCTTAGTACGAAAC +
Preference number: 5 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAGLSAG*GLLVRN
Trigger: GTTTCGTACTAAGAGCCCCAAGCCTGCCGAAAGCCC...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGAAGCTGGGCTTTCGGCAGGCTaGGGGCTCTTAGTACGAAAC +
Preference number: 5 (lower is better)
Translates to: WVRSFSFHRGVFHFLYEAGLSAG*GLLVRN
Trigger: GTTTCGTACTAAGAGCCCCAAGCCTGCCGAAAGCCC...AGCTTCATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS GCA 90 bp CAAACATGGTCCCACAGATGGTGTTGCAGTCTTTGCACCAGTGATTaGCAGCATCATAATACTCATAAGCAGCAGTGGGCTGATCCAACT +
Preference number: 5 (lower is better)
Translates to: QTWSHRWCCSLCTSD*QHHNTHKQQWADPT
Trigger: AGTTGGATCAGCCCACTGCTGCTTATGAGTATTATGATGCTGGCAATCACTGGTGCAAAGACTGCAACACCATCTGTGGGACCATGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361428.3
ENST00000605935.5
ENST00000606599.1
CDS GCA 90 bp GAACCAGAAACTCAGAGCCTTTTGCAGGAACAGTTATCTTGTCAGTaGGCTTTATGGCATCTTGCTTGGCCTCACTCTGGGTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: EPETQSLLQEQLSCQ*ALWHLAWPHSGSLK
Trigger: CTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACAAGATAACTGTTCCTGCAAAAGGCTCTGAGTTTCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAAGAGGACTGTTGTCTTaGGGAATCCCAGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: RTMHLKKGNRVREVQELTRGLLS*GIPGRG
Trigger: TCCCCTTCCTGGGATTCCCAAAGACAACAGTCCTCT...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCAGGTACAGGGTGGTTaGACGGTTGAGAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCQVQGG*TVERWD
Trigger: ATCCCACCTCTCAACCGTCAAACCACCCTGTACCTG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCGGGATCACACGAAGATaGGGACGGCTACGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFGITRR*GRLRVA
Trigger: AGCTACTCGTAGCCGTCCCAATCTTCGTGTGATCCC...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAGATGGAATAGGCAGGTaGGGTCGGATCTTAGTCTGT +
Preference number: 5 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLDGIGR*GRILVC
Trigger: ACAGACTAAGATCCGACCCAACCTGCCTATTCCATC...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACGTGGCTGAACATGACTaGCGGAGTACTGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHVAEHD*RSTVDG
Trigger: TCCATCCACAGTACTCCGCAAGTCATGTTCAGCCAC...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGAGCTGGCTTGCTCATaGTGGCTGAACATGACTTGC +
Preference number: 5 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIELACS*WLNMTC
Trigger: GCAAGTCATGTTCAGCCACAATGAGCAAGCCAGCTC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 90 bp AGTCTGTGTGGAAGTTGTCACAACAGGCATCCAAGGGCTGGTATGTaGAACAACAGTTTTCCCAGAGAGCTTGATTTTGATAGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SLCGSCHNRHPRAGM*NNSFPRELDFDRLC
Trigger: GCAAAGCCTATCAAAATCAAGCTCTCTGGGAAAACTGTTGTTGCACATACCAGCCCTTGGATGCCTGTTGTGACAACTTCCACACAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 90 bp ATTTTCTTCACACACTTTCTGACACAAGACAGTTGGGGATCTATGTaGTGGGCTTACCCGAGTAGTGCAGAAATCAACAGGCATATCCCC +
Preference number: 5 (lower is better)
Translates to: IFFTHFLTQDSWGSM*WAYPSSAEINRHIP
Trigger: GGGGATATGCCTGTTGATTTCTGCACTACTCGGGTAAGCCCAGCACATAGATCCCCAACTGTCTTGTGTCAGAAAGTGTGTGAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 90 bp GGAGCTTTAACCAAATTCAGAGGGTCGCCACTGTCATCATCTACTTaGAGAATTGCCACCTCTGTGGTGGATGCATTCGATATTTCTAGC +
Preference number: 5 (lower is better)
Translates to: GALTKFRGSPLSSST*RIATSVVDAFDISS
Trigger: GCTAGAAATATCGAATGCATCCACCACAGAGGTGGCAATTCTGCAAGTAGATGATGACAGTGGCGACCCTCTGAATTTGGTTAAAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp ACTCTGGAAGGAACTAGAGGTCCATATGGCCAAAGTGTCTGTCTTTaGGGTAATTGTTTCATAAGGCCTGCTTTGGCACAACCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: TLEGTRGPYGQSVCL*GNCFIRPALAQPCQ
Trigger: CTGACAAGGTTGTGCCAAAGCAGGCCTTATGAAACAATTACCCCAAAGACAGACACTTTGGCCATATGGACCTCTAGTTCCTTCCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp TCAAGCTCACTCTTCTCTGGAGATATATCCCTACTAGTGTCACTCTaGAAGGAACTAGAGGTCCATATGGCCAAAGTGTCTGTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: SSSLFSGDISLLVSL*KELEVHMAKVSVFG
Trigger: CCCAAAGACAGACACTTTGGCCATATGGACCTCTAGTTCCTTCCAGAGTGACACTAGTAGGGATATATCTCCAGAGAAGAGTGAGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TGGGTTCGAAGCTTCTCTTTCCATAGAGGAGTCTTTCATTTCCTCTATGAAGCTAGAGGACTGTTGTCTTaGGGAATCCCAGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: WVRSFSFHRGVFHFLYEARGLLS*GIPGRG
Trigger: TCCCCTTCCTGGGATTCCCAAAGACAACAGTCCTCT...AGCTTCATAGAGGAAATGAAAGACTCCTCTATGGAAAGAGAAGCTTCGAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCAGCTCCCAAGGGGCTTaGGTACGGATTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCSSQGA*VRILPL
Trigger: TAAAGGCAGAATCCGTACCAAAGCCCCTTGGGAGCT...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCAGCTCCCAAGGGGCTTaGGTACGGATTCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFSSQGA*VRILPL
Trigger: TAAAGGCAGAATCCGTACCAAAGCCCCTTGGGAGCT...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACGCGCAGCATTTCTCCTaGTTGTTTATGAAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHAQHFS*LFMKPL
Trigger: GAGCGGCTTCATAAACAACAAGGAGAAATGCTGCGC...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAATGGGCTTTTCAGAGTaGCTAACTATAGGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGMGFSE*LTIGAA
Trigger: CGCTGCTCCTATAGTTAGCAACTCTGAAAAGCCCAT...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGGGCCACCAGAGTTTTaGCAATGGGCTTTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPGPPEF*QWAFQS
Trigger: ACTCTGAAAAGCCCATTGCAAAAACTCTGGTGGCCC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGATGCTGCCTGTGCTTTTaGGGCCTACATGTTCTACAA +
Preference number: 5 (lower is better)
Translates to: RATHAAFQTMLRQAHPNGCCLCF*GLHVLQ
Trigger: TTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGCA...TCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 90 bp ACTGGGTTCAAAATGTTAGGACCCACGAAGCCAGGGCTGAGAGTCTaGGATACAACTGGGTTTGATTTTACTGGAGCCAAGATAGCATTT +
Preference number: 5 (lower is better)
Translates to: TGFKMLGPTKPGLRV*DTTGFDFTGAKIAF
Trigger: AAATGCTATCTTGGCTCCAGTAAAATCAAACCCAGTTGTATCTCAGACTCTCAGCCCTGGCTTCGTGGGTCCTAACATTTTGAACCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 90 bp TTTTCAGAGTTGCTAACTATAGGAGCAGCGACCAAACCCTCATCTTaGTGCAACTCCTCTTGGGATGCACTGCTGTTCAAAGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: FSELLTIGAATKPSS*CNSSWDALLFKGEV
Trigger: TACTTCTCCTTTGAACAGCAGTGCATCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGGTCGCTGCTCCTATAGTTAGCAACTCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCGTAGTCCTCATCAAGTaGTCCCAAGAAGGGACTGAG +
Preference number: 5 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAVVLIK*SQEGTE
Trigger: CTCAGTCCCTTCTTGGGACAACTTGATGAGGACTAC...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTCTCTGAGAGGACTGTaGTCTTTGGGAATCCCAGGA +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCSLRGL*SLGIPG
Trigger: TCCTGGGATTCCCAAAGACAACAGTCCTCTCAGAGA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACTCCAGCCCTATTGTCTaGAGCAAGTCATGGATCTTC +
Preference number: 5 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHSSPIV*SKSWIF
Trigger: GAAGATCCATGACTTGCTCAAGACAATAGGGCTGGA...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTCACAGAATCAGGAGTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGTCCAGCCCTATTGTCTaGAGCAAGTCATGGATCTTC +
Preference number: 5 (lower is better)
Translates to: VTESGVKFHPLPKSKMIGSSPIV*SKSWIF
Trigger: GAAGATCCATGACTTGCTCAAGACAATAGGGCTGGA...CCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGACTCCTGATTCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp AATGATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATCTCTTCAATAACCTTTaGCTTCTGGGAAGCACGGTT +
Preference number: 5 (lower is better)
Translates to: NDWAFPLLLLGFWNRQSYLFNNL*LLGSTV
Trigger: AACCGTGCTTCCCAGAAGCAAAAGGTTATTGAAGAG...ATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp TCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTACCGCGCAGCATTTCTCCTaGTTGTTTATGAAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SWAFGTGRAIKRLFVISTAQHFS*LFMKPL
Trigger: GAGCGGCTTCATAAACAACAAGGAGAAATGCTGCGC...GGTAGAAATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATACCAAGAGAGGATCTTaGTGGCCATCCTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: LLLLGFWNRQSYKALICNTKRGS*WPSFSL
Trigger: AAGGGAGAAGGATGGCCACAAAGATCCTCTCTTGGT...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTGCGCTTTATGGCATCTaGCTTGGCCTCACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIALYGI*LGLTLG
Trigger: ACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGC...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAGCAGGAACAGTTATCTaGTCAGTGCGCTTTATGGCA +
Preference number: 5 (lower is better)
Translates to: RTMHLKKGNRVREVQELTAGTVI*SVRFMA
Trigger: TGCCATAAAGCGCACTGACAAGATAACTGTTCCTGC...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGGTTTCTCACTAAGTTaGCGCTTTAGCTCACTCTGC +
Preference number: 5 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPGFSLS*RFSSLC
Trigger: GCAGAGTGAGCTAAAGCGCAAACTTAGTGAGAAACC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACATTAAGAGGAGCTGGCTaGCTCATTGTGGCTGAACAT +
Preference number: 5 (lower is better)
Translates to: RTMHLKKGNRVREVQELTLRGAG*LIVAEH
Trigger: ATGTTCAGCCACAATGAGCAAGCCAGCTCCTCTTAA...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTGGTTCTAGAGAGGTaGCTATTTTCCCCATTGGCC +
Preference number: 5 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPLVLER*LFSPLA
Trigger: GGCCAATGGGGAAAATAGCAACCTCTCTAGAACCAA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCGACCAAACCCTCATCTaGATGCAACTCCTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: TVNKRATHAAFQTMLRQADQTLI*MQLLLG
Trigger: TCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGGTC...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTTCATAAGGCCTGCTTaGGCACAACCTTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCFIRPA*AQPCQR
Trigger: CCTCTGACAAGGTTGTGCCAAAGCAGGCCTTATGAA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTCAGAAAAAGATGGGATaGGTTCGAAGTCAGCGGGAT +
Preference number: 5 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIQKKMG*VRSQRD
Trigger: ATCCCGCTGACTTCGAACCAATCCCATCTTTTTCTG...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CCCCCATCAGTCATACCCACCTTCTGGAAGTCAGATCCTTCAGGTGATTGCCTAATGTACATTCTAATCTaGTTCATCCTCTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: PPSVIPTFWKSDPSGDCLMYILI*FILYRY
Trigger: GTACCTGTAGAGGATGAACAAGATTAGAATGTACAT...TAGGCAATCACCTGAAGGATCTGACTTCCAGAAGGTGGGTATGACTGATGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606599.1
CDS TCA 90 bp TGTAGGGATCCAGTGTCTGTGTGTGCTTCTTATTGTGCATATGAGTaGAGAAATCAAACATGGTCCCACAGATGGTGTTGCAGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: CRDPVSVCASYCAYE*RNQTWSHRWCCSLC
Trigger: GCAAAGACTGCAACACCATCTGTGGGACCATGTTTGATTTCTTCACTCATATGCACAATAAGAAGCACACACAGACACTGGATCCCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTGGTGCGTGCAGCCAATaGACTAATCTCTGCTACTCC +
Preference number: 5 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIGACSQ*TNLCYS
Trigger: GGAGTAGCAGAGATTAGTCAATTGGCTGCACGCACC...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAAACGGCTACGAGTAGCTaGTTTGGTTATTGGCATTAT +
Preference number: 5 (lower is better)
Translates to: SGWPVKEMELEMSTNGFETATSS*FGYWHY
Trigger: ATAATGCCAATAACCAAACAAGCTACTCGTAGCCGT...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACACTCTTCAATAACCTTTaGCTTCTGGGAAGCACGGTT +
Preference number: 5 (lower is better)
Translates to: RTMHLKKGNRVREVQELTLFNNL*LLGSTV
Trigger: AACCGTGCTTCCCAGAAGCAAAAGGTTATTGAAGAG...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATTTCTCCCTTCGTTTCTaGCGCAGCATTTCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LLLLGFWNRQSYKALICNFSLRF*RSISPC
Trigger: ACAAGGAGAAATGCTGCGCAAGAAACGAAGGGAGAA...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGAACCAAGAGAGGATCTTaGTGGCCATCCTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRTKRGS*WPSFSL
Trigger: AAGGGAGAAGGATGGCCACAAAGATCCTCTCTTGGT...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCCCAGCTTCAGTTTaGCCATCCTCTTTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPFPASV*PSSLSL
Trigger: TAAGGACAAAGAGGATGGCAAAACTGAAGCTGGGAA...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCCAGAGAGCTTGATTTaGATAGGCTTTGCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCPESLI*IGFAFP
Trigger: TGGGAAGGCAAAGCCTATCAAAATCAAGCTCTCTGG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGCAAGATAGCATTTGCTaGAGCAGCAGACGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKQDSIC*SSRRGS
Trigger: GCTGCCCCGTCTGCTGCTCAAGCAAATGCTATCTTG...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCTTGCTATTTTCCCCATaGGCCAATGGACCACCACTT +
Preference number: 5 (lower is better)
Translates to: TVNKRATHAAFQTMLRQALLFSP*ANGPPL
Trigger: AAGTGGTGGTCCATTGGCCAATGGGGAAAATAGCAA...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTTGATGCAACTCCTCTaGGGATGCACTGCTGTTCAA +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCLMQLL*GCTAVQ
Trigger: TTGAACAGCAGTGCATCCCAAGAGGAGTTGCATCAA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCCCAGTGCTTCTGTTTTaGGTTTCTCTGGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSPVLLF*VSLGSP
Trigger: GGGAGAGCCCAGAGAAACCAAAAACAGAAGCACTGG...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCTCTGACACAAGACAGTaGGGGATCTATGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSSDTRQ*GIYVLG
Trigger: GCCCAGCACATAGATCCCCAACTGTCTTGTGTCAGA...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACATCAAGCACCAAGGTTTaGGGAGAATCTAACGGAAAC +
Preference number: 5 (lower is better)
Translates to: RTMHLKKGNRVREVQELTSSTKV*GESNGN
Trigger: GTTTCCGTTAGATTCTCCCAAAACCTTGGTGCTTGA...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCAACTGCCCAGGAAATaGGGTAGGAATACAACACAG +
Preference number: 5 (lower is better)
Translates to: TVNKRATHAAFQTMLRQAQLPRK*GRNTTQ
Trigger: CTGTGTTGTATTCCTACCCAATTTCCTGGGCAGTTG...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 90 bp GAATTACACCCTATAGGTGATACAGAATTTTCTTCACACACTTTCTaGCACAAGACAGTTGGGGATCTATGTGCTGGGCTTACCCGAGTA +
Preference number: 5 (lower is better)
Translates to: ELHPIGDTEFSSHTF*HKTVGDLCAGLTRV
Trigger: TACTCGGGTAAGCCCAGCACATAGATCCCCAACTGTCTTGTGTCAGAAAGTGTGTGAAGAAAATTCTGTATCACCTATAGGGTGTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 90 bp ACTTTTGGAATTGCCCCTGTGTGTGCTTCTTATTGTGCATATGAGTaGAGAAATCAAACATGGTCCCACAGATGGTGTTGCAGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: TFGIAPVCASYCAYE*RNQTWSHRWCCSLC
Trigger: GCAAAGACTGCAACACCATCTGTGGGACCATGTTTGATTTCTTCACTCATATGCACAATAAGAAGCACACACAGGGGCAATTCCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS TCA 90 bp GAAGACTTTTGGAATTGCCCCTGTGTGTGCTTCTTATTGTGCATATaGGTGAAGAAATCAAACATGGTCCCACAGATGGTGTTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: EDFWNCPCVCFLLCI*VKKSNMVPQMVLQS
Trigger: AGACTGCAACACCATCTGTGGGACCATGTTTGATTTCTTCACTCATATGCACAATAAGAAGCACACACAGGGGCAATTCCAAAAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS CCA 90 bp ATCTCTGCTACTCCAATATCCAGCCCTATTGTCTTGAGCAAGTCATaGATCTTCGCATATTCTGGATTGGTCTCTTCTAGTGATTCTAGC +
Preference number: 5 (lower is better)
Translates to: ISATPISSPIVLSKS*IFAYSGLVSSSDSS
Trigger: GCTAGAATCACTAGAAGAGACCAATCCAGAATATGCGAAGATCCATGACTTGCTCAAGACAATAGGGCTGGATATTGGAGTAGCAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 90 bp CACATGTATCTGTTTCCATGGTTCAAATTAGAATCATCTATGCTGTaGGGTCCAATGCTGGTACTTACTCCCTCATCAACTATCCCCTCA +
Preference number: 5 (lower is better)
Translates to: HMYLFPWFKLESSML*GPMLVLTPSSTIPS
Trigger: TGAGGGGATAGTTGATGAGGGAGTAAGTACCAGCATTGGACCCCACAGCATAGATGATTCTAATTTGAACCATGGAAACAGATACATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGACACAGAAGTGGTCATaGCCAACAGTGATCCTTAAG +
Preference number: 5 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMTQKWS*PTVILK
Trigger: CTTAAGGATCACTGTTGGCAATGACCACTTCTGTGT...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTCTACCATAGTCCCCTaGTTTTCAATCTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCSTIVP*FSISEA
Trigger: TGCCTCAGAGATTGAAAACAAGGGGACTATGGTAGA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCTCTACCATAGTCCCCTaGTTTTCAATCTCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFSTIVP*FSISEA
Trigger: TGCCTCAGAGATTGAAAACAAGGGGACTATGGTAGA...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp AGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGGTTCGAATTCGCATATTCTGGATaGGTCTCTTCTAGTGATTCT +
Preference number: 5 (lower is better)
Translates to: SGWPVKEMELEMSTNGFEFAYSG*VSSSDS
Trigger: AGAATCACTAGAAGAGACCAATCCAGAATATGCGAA...TTCGAACCCATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATTCTCCCTTCGTTTCTaGCGCAGCATTTCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRFSLRF*RSISPC
Trigger: ACAAGGAGAAATGCTGCGCAAGAAACGAAGGGAGAA...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATGATTGGGCTTTTCCTCTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATTCTCATTGTTTACTTTaGATTCCTTGTTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NDWAFPLLLLGFWNRQSYSHCLL*IPCWRR
Trigger: CCTCCTCCAACAAGGAATCAAAAGTAAACAATGAGA...ATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAGAGGAAAAGCCCAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp TTCAGCAAGCTTTCTGGTGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGAAACTCAGAGCCTTTaGCAGGAACAGTTATCTTGT +
Preference number: 5 (lower is better)
Translates to: FSKLSGVFPRDASTAQEIETQSL*QEQLSC
Trigger: ACAAGATAACTGTTCCTGCAAAAGGCTCTGAGTTTC...AATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACACCAGAAAGCTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCTCCCCTCCAAATGCTTaGGAGATGATGTCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSSPPNA*EMMSGG
Trigger: ACCTCCAGACATCATCTCCAAAGCATTTGGAGGGGA...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATACAGGTCCTTAGCATaGGCTGTGGCTAAGCATGAA +
Preference number: 5 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRYRSLA*AVAKHE
Trigger: TTCATGCTTAGCCACAGCCAATGCTAAGGACCTGTA...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCAGATTTACGGAGCTCTaGGCTTTCCTTATCCTGGTT +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCRFTEL*AFLILV
Trigger: AACCAGGATAAGGAAAGCCAAGAGCTCCGTAAATCT...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp GTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTCAGAGATCTTCTACCCCGACTGTTCAGCCTCTTaGTCAATCATTAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: VEQGMSSISRQVSEIFYPDCSAS*SIISKL
Trigger: CAACTTGCTAATGATTGACAAAGAGGCTGAACAGTC...GGGGTAGAAGATCTCTGAAACTTGTCTTGAGATTGAACTCATTCCCTGTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTGTCTCTGGCCTCTTCTaGTTTTCATCCCAAACAGCC +
Preference number: 5 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIVSGLF*FSSQTA
Trigger: GGCTGTTTGGGATGAAAACAAGAAGAGGCCAGAGAC...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGGGCCTTGCTTTCTATaGTCACTGTTAACTCTGGAT +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCGPCFL*SLLTLD
Trigger: ATCCAGAGTTAACAGTGACAATAGAAAGCAAGGCCC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TGTTTTTCCCAGAGATGCATCAACTGCCCAGGAAATTGGGTAGGAATACAACACACACAGTTTATCTTTTaGAACTCCAGAGGTCCGTGT +
Preference number: 5 (lower is better)
Translates to: CFSQRCINCPGNWVGIQHTQFIF*NSRGPC
Trigger: ACACGGACCTCTGGAGTTCAAAAAGATAAACTGTGT...GTGTTGTATTCCTACCCAATTTCCTGGGCAGTTGATGCATCTCTGGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACAGTAAACAAAAGAGCTACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCACTGTCATCATCTACTaGCAGAATTGCCACCTCTGT +
Preference number: 5 (lower is better)
Translates to: TVNKRATHAAFQTMLRQATVIIY*QNCHLC
Trigger: ACAGAGGTGGCAATTCTGCAAGTAGATGATGACAGT...GGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGTAGCTCTTTTGTTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGTAGATTAGTGGTTGGCCAGTCAAGGAGATGGAATTGGAAATGTCCACTAATGGCAGGAAAGTTTCTTTaGTTCGGTAGTCCTCATCAA +
Preference number: 5 (lower is better)
Translates to: SRLVVGQSRRWNWKCPLMAGKFL*FGSPHQ
Trigger: TTGATGAGGACTACCGAACAAAAGAAACTTTCCTGC...CATTAGTGGACATTTCCAATTCCATCTCCTTGACTGGCCAACCACTAATCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp CTTCTTCTCCTGGGCTTTTGGAACAGGCAGAGCTATAAAGCGCTTATTTGTAATCTACGAGTAGCTTGTTaGGTTATTGGCATTATCCTG +
Preference number: 5 (lower is better)
Translates to: LLLLGFWNRQSYKALICNLRVAC*VIGIIL
Trigger: CAGGATAATGCCAATAACCAAACAAGCTACTCGTAG...ATTACAAATAAGCGCTTTATAGCTCTGCCTGTTCCAAAAGCCCAGGAGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp GTCAAATTCCACCCTCTTCCCAAATCCAAAATGATTGGGCTTTTCCTCTTCTTCTGTTGGAGGAGGAGTTaGAGAACGATGACACTTTTT +
Preference number: 5 (lower is better)
Translates to: VKFHPLPKSKMIGLFLFFCWRRS*RTMTLF
Trigger: AAAAAGTGTCATCGTTCTCAAACTCCTCCTCCAACA...GAAGAAGAGGAAAAGCCCAATCATTTTGGATTTGGGAAGAGGGTGGAATTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605935.5
CDS-3UTR CAA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACATCTCATTGTTTACTTTaGATTCCTTGTTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RTMHLKKGNRVREVQELTSHCLL*IPCWRR
Trigger: CCTCCTCCAACAAGGAATCAAAAGTAAACAATGAGA...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTTTATGGCATCTTGCTaGGCCTCACTCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVFMASC*ASLWVF
Trigger: AAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGTATTTCTCATTGTGTaGGTGACCCTTCACATGTTG +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCVFLIV*VTLHML
Trigger: CAACATGTGAAGGGTCACCAACACAATGAGAAATAC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AGGACAATGCATCTCAAGAAAGGCAACAGAGTAAGGGAAGTACAGGAGTTGACAGTTTTGCCATCCTCTTaGTCCTTACTACTTTCTAGA +
Preference number: 5 (lower is better)
Translates to: RTMHLKKGNRVREVQELTVLPSS*SLLLSR
Trigger: TCTAGAAAGTAGTAAGGACAAAGAGGATGGCAAAAC...TGTCAACTCCTGTACTTCCCTTACTCTGTTGCCTTTCTTGAGATGCATTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCGAGATACAACTGGGTTaGATTTTACTGGAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCEIQLG*ILLEPR
Trigger: TCTTGGCTCCAGTAAAATCAAACCCAGTTGTATCTC...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTATTTCCAAACAGGTTaGTGGGTTAGCAGGACAATG +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCYFQTG*WVSRTM
Trigger: CATTGTCCTGCTAACCCACAAACCTGTTTGGAAATA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp ACTCACGCTGCATTTCAAACAATGTTAAGGCAGGCCCATCCAAATGGAAGCCTAATAAGCCTTACCGATTaGTCGTCTTCTAAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: THAAFQTMLRQAHPNGSLISLTD*SSSKSK
Trigger: CTTACTTTTAGAAGACGACAAATCGGTAAGGCTTAT...TAGGCTTCCATTTGGATGGGCCTGCCTTAACATTGTTTGAAATGCAGCGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 90 bp TCAATTTATTGGACTGTTCAGCCTCTTTGTCAATCATTAGCAAGTTaGGCTGTTTTACTTCTCCCTCCCACATGTATCTGTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: SIYWTVQPLCQSLAS*AVLLLPPTCICFHG
Trigger: ACCATGGAAACAGATACATGTGGGAGGGAGAAGTAAAACAGCCCAACTTGCTAATGATTGACAAAGAGGCTGAACAGTCCAATAAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCACACAGAAGTGGTCATaGCCAACAGTGATCCTTAAG +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSTQKWS*PTVILK
Trigger: CTTAAGGATCACTGTTGGCAATGACCACTTCTGTGT...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCTTCGCATATTCTGGATaGGTCTCTTCTAGTGATTCT +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCFAYSG*VSSSDS
Trigger: AGAATCACTAGAAGAGACCAATCCAGAATATGCGAA...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCAATTTCTCAGAGACCTaGTCATCCTCCTTTACTTCT +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCNFSET*SSSFTS
Trigger: AGAAGTAAAGGAGGATGACAAGGTCTCTGAGAAATT...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCGAGGTGTCTGAACTTTaGGTTCTAGAGAGGTTGCTA +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSEVSEL*VLERLL
Trigger: TAGCAACCTCTCTAGAACCAAAAGTTCAGACACCTC...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp TCCATGAACATTTACTTTAAGATGCTGACTGCATCTCTTGGTGTAGGTTCCAGATCAATCATTAGCAAGTaGGGCTGTTTTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SMNIYFKMLTASLGVGSRSIISK*GCFTSP
Trigger: GGGAGAAGTAAAACAGCCCAACTTGCTAATGATTGA...TCTGGAACCTACACCAAGAGATGCAGTCAGCATCTTAAAGTAAATGTTCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCGGTGTATCTTGTGGGTaGAGTAAAGACCTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSGVSCG*SKDLAS
Trigger: AGAAGCTAGGTCTTTACTCAACCCACAAGATACACC...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCGCAGGAAAGTTTCTTTaGTTCGGTAGTCCTCATCAA +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSAGKFL*FGSPHQ
Trigger: TTGATGAGGACTACCGAACAAAAGAAACTTTCCTGC...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTCTACGAGTAGCTTGTTaGGTTATTGGCATTATCCTG +
Preference number: 5 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVILRVAC*VIGIIL
Trigger: CAGGATAATGCCAATAACCAAACAAGCTACTCGTAG...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTACGGCTACGAGTAGCTaGTTTGGTTATTGGCATTAT +
Preference number: 5 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVITATSS*FGYWHY
Trigger: ATAATGCCAATAACCAAACAAGCTACTCGTAGCCGT...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTTGTTGGAGGAGGAGTTaGAGAACGATGACACTTTTT +
Preference number: 5 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVCWRRS*RTMTLF
Trigger: AAAAAGTGTCATCGTTCTCAAACTCCTCCTCCAACA...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCTCAAGACAAGTTTCAGAGATCTTCTACCCCTTCACAACACAAATGGCTGCCAAAAGAAGATGATGTaGGTGATTCCTTCTTTACCT +
Preference number: 5 (lower is better)
Translates to: NLKTSFRDLLPLHNTNGCQKKMM*VIPSLP
Trigger: AGGTAAAGAAGGAATCACCAACATCATCTTCTTTTG...GCAGCCATTTGTGTTGTGAAGGGGTAGAAGATCTCTGAAACTTGTCTTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTGCCTGTGGACTCAATTaGATCACTACTTTACTTGGA +
Preference number: 5 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIACGLN*ITTLLG
Trigger: TCCAAGTAAAGTAGTGATCAAATTGAGTCCACAGGC...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGCCAAAATACAATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTCCGAGTGACTCTTGTTaGTCTAATTGGGAAGATTCT +
Preference number: 5 (lower is better)
Translates to: KPKYNQSTLCGEPVRHVIPSDSC*SNWEDS
Trigger: AGAATCTTCCCAATTAGACAAACAAGAGTCACTCGG...AATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATTGTATTTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AATCAAAGCACACTATGTGGTGAGCCAGTTAGACATGTGATTTTAATGACAAAGCCTGTCATCAATTTATaGGACTGTTCAGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: NQSTLCGEPVRHVILMTKPVINL*DCSASL
Trigger: CAAAGAGGCTGAACAGTCCAATAAATTGATGACAGG...CTTTGTCATTAAAATCACATGTCTAACTGGCTCACCACATAGTGTGCTTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp AAGGATACATATGGGTTTGTGGAACAGGGAATGAGTTCAATCTCAAGACAAGTTCTTTCTCTCTTGAGTTaGAGACTTCTGTACCTAGAA +
Preference number: 5 (lower is better)
Translates to: KDTYGFVEQGMSSISRQVLSLLS*RLLYLE
Trigger: TTCTAGGTACAGAAGTCTCAAACTCAAGAGAGAAAG...AACTTGTCTTGAGATTGAACTCATTCCCTGTTCCACAAACCCATATGTATCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS-3UTR CAA 90 bp CATCCAAATGGAAGCCTAAGAGATGAACAATTCTTCCAAGTTTTCCATTTCAGCTCTTTTAACTGGAGTTaGATGCCAGTGTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: HPNGSLRDEQFFQVFHFSSFNWS*MPVFLL
Trigger: TAAAAGGAACACTGGCATCAAACTCCAGTTAAAAGA...GCTGAAATGGAAAACTTGGAAGAATTGTTCATCTCTTAGGCTTCCATTTGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp CTGCGCGGGCCGCCCCCGCCGTCGTCTTTAGGCCGGTaGGAAGAGACGGAGGAGCGAGCGCTGCTGCGGTAC +
Preference number: 6 (lower is better)
Translates to: LRGPPPPSSLGR*EETEERALLRY
Trigger: GTACCGCAGCAGCGCTCGCTCCTCCGTCTCTTCCCACCGGCCTAAAGACGACGGCGGGGGCGGCCCGCGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 72 bp GACGGAGGAGCGAGCGCTGCTGCGGTACATGGTTCTTaGAGCGGCGGCCACGGCGACAGCTCTGACCCGGGG +
Preference number: 6 (lower is better)
Translates to: DGGASAAAVHGS*SGGHGDSSDPG
Trigger: CCCCGGGTCAGAGCTGTCGCCGTGGCCGCCGCTGCAAGAACCATGTACCGCAGCAGCGCTCGCTCCTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp TTGTGCTCTGCATGCCCGCCAGGGGACAGGATGCTGTaGCAGCGCTCACATTTCAGGCAGAAGCGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: LCSACPPGDRML*QRSHFRQKRCQ
Trigger: CTGGCACCGCTTCTGCCTGAAATGTGAGCGCTGCCACAGCATCCTGTCCCCTGGCGGGCATGCAGAGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607252.5
CDS GCA 72 bp TCCCATTGTGCTCTGCATGCCCGCCAGGGGACAGGATaGTGTGGCAGCGCTCACATTTCAGGCAGAAGCGGT +
Preference number: 6 (lower is better)
Translates to: SHCALHARQGTG*CGSAHISGRSG
Trigger: ACCGCTTCTGCCTGAAATGTGAGCGCTGCCACAGCATCCTGTCCCCTGGCGGGCATGCAGAGCACAATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607252.5
CDS CCA 72 bp CGGGAAAAACCACTGCCATCCTGGCTAGCTCTCTCATaGGGCAGCAGGAAGTCTGTGTGTCGCTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: REKPLPSWLALS*GSRKSVCRSGP
Trigger: GGGACCTGAGCGACACACAGACTTCCTGCTGCCCCATGAGAGAGCTAGCCAGGATGGCAGTGGTTTTTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp CGCCGTTCTGTCTCTAGGACCACAGCCAAGCCAGCTTaGCGGTCCAGATTCCGCCGCTCCTCATATAATGGG +
Preference number: 6 (lower is better)
Translates to: RRSVSRTTAKPA*RSRFRRSSYNG
Trigger: CCCATTATATGAGGAGCGGCGGAATCTGGACCGCCAAGCTGGCTTGGCTGTGGTCCTAGAGACAGAACGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp GGTGGTGGAGGACGTACTAACACAGAGAACAGGGTCTaGTCTCGGTCACTCTCACTCACCCCAGGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: GGGGRTNTENRV*SRSLSLTPGAV
Trigger: GACAGCTCCTGGGGTGAGTGAGAGTGACCGAGACCAGACCCTGTTCTCTGTGTTAGTACGTCCTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 72 bp GTCATCCCTGTCCATGTCTTCCAGATTATCCACTGGTaGCCCCAGCCGATCACTAAGCCGTCGCCGTTCTGG +
Preference number: 6 (lower is better)
Translates to: VIPVHVFQIIHW*PQPITKPSPFW
Trigger: CCAGAACGGCGACGGCTTAGTGATCGGCTGGGGTCACCAGTGGATAATCTGGAAGACATGGACAGGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp ATAAGCAGCAGTGGGCTGATCCAACTGCTTAGTGGCTaGCTGGGGGCTTTCGGCAGGCTTGGGGCTCTTAGT +
Preference number: 6 (lower is better)
Translates to: ISSSGLIQLLSG*LGAFGRLGALS
Trigger: ACTAAGAGCCCCAAGCCTGCCGAAAGCCCCCAGTCAGCCACTAAGCAGTTGGATCAGCCCACTGCTGCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 72 bp GTGGGTGTGGATGGGACACCTCTGGAGAGTGGGTATTaGTATGATGTGCCTCCCTGCTCTCTAGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: VGVDGTPLESGY*YDVPPCSLVCG
Trigger: CCCACAGACTAGAGAGCAGGGAGGCACATCATAGCAATACCCACTCTCCAGAGGTGTCCCATCCACACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp ATCCTGTGTGGTTCAGGTACAGGGTGGTTTGACGGTTaGGAGGTGGGATACATGGGCCATCTGGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: ILCGSGTGWFDG*EVGYMGHLEAA
Trigger: TGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTACCTGAACCACACAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 72 bp AACGGCGGTCAGCTGAGGAGCGTAATGATGGCTTCTTaGCATGAAGTCGTTCCTGGGTGCGTGCAGCCAATT +
Preference number: 6 (lower is better)
Translates to: NGGQLRSVMMAS*HEVVPGCVQPI
Trigger: AATTGGCTGCACGCACCCAGGAACGACTTCATGGCAAGAAGCCATCATTACGCTCCTCAGCTGACCGCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp AGTTGTCCCAAGAAGGGACTGAGAGGCCCTTCCTCCTaGGAAATATATCGCTCAAGACCCCGAGAGCACTGG +
Preference number: 6 (lower is better)
Translates to: SCPKKGLRGPSS*EIYRSRPREHW
Trigger: CCAGTGCTCTCGGGGTCTTGAGCGATATATTTCCCAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp GTACAGGGTGGTTTGACGGTTGAGAGGTGGGATACATaGGCCATCTGGAGGCTGCATATGCCATGTAGTGCC +
Preference number: 6 (lower is better)
Translates to: VQGGLTVERWDT*AIWRLHMPCSA
Trigger: GGCACTACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp GTGGTTCAGGTACAGGGTGGTTTGACGGTTGAGAGGTaGGATACATGGGCCATCTGGAGGCTGCATATGCCA +
Preference number: 6 (lower is better)
Translates to: VVQVQGGLTVER*DTWAIWRLHMP
Trigger: TGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTACCTGAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp ATCGCTCAAGACCCCGAGAGCACTGGGAGCTTCGAGTaGAGACAGAATCATCAGTCAGGTCATCCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: IAQDPESTGSFE*RQNHQSGHPCP
Trigger: TGGACAGGGATGACCTGACTGATGATTCTGTCTTCACTCGAAGCTCCCAGTGCTCTCGGGGTCTTGAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp TGTGGATGGGACACCTCTGGAGAGTGGGTATTGCTATaGTGTGCCTCCCTGCTCTCTAGTCTGTGGGGATCT +
Preference number: 6 (lower is better)
Translates to: CGWDTSGEWVLL*CASLLSSLWGS
Trigger: AGATCCCCACAGACTAGAGAGCAGGGAGGCACATCATAGCAATACCCACTCTCCAGAGGTGTCCCATCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp AGCTGTCTCATCAGAAGGAATGGCAGCTGGCTGTGCTaGGGCCATGATGGCTACAGGCAACACTGGGTTCAA +
Preference number: 6 (lower is better)
Translates to: SCLIRRNGSWLC*GHDGYRQHWVQ
Trigger: TTGAACCCAGTGTTGCCTGTAGCCATCATGGCCTCAGCACAGCCAGCTGCCATTCCTTCTGATGAGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 72 bp CCTCTGGAGAGTGGGTATTGCTATGATGTGCCTCCCTaGTCTCTAGTCTGTGGGGATCTGAGGAACGTCGAT +
Preference number: 6 (lower is better)
Translates to: PLESGYCYDVPP*SLVCGDLRNVD
Trigger: ATCGACGTTCCTCAGATCCCCACAGACTAGAGAGCAGGGAGGCACATCATAGCAATACCCACTCTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp CTTATGAGTGATGGAATGGACACCTGGACAGGCACTTaGGCCGCAGGAATTGAGCCTCGCAGAGACTCTTTC +
Preference number: 6 (lower is better)
Translates to: LMSDGMDTWTGT*AAGIEPRRDSF
Trigger: GAAAGAGTCTCTGCGAGGCTCAATTCCTGCGGCCCAAGTGCCTGTCCAGGTGTCCATTCCATCACTCATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 72 bp AGAGGTGGGATACATGGGCCATCTGGAGGCTGCATATaGCATGTAGTGCCTATAGGCATCAAAAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RGGIHGPSGGCI*HVVPIGIKRGR
Trigger: CCTGCCTCTTTTGATGCCTATAGGCACTACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp GGTTTGACGGTTGAGAGGTGGGATACATGGGCCATCTaGAGGCTGCATATGCCATGTAGTGCCTATAGGCAT +
Preference number: 6 (lower is better)
Translates to: GLTVERWDTWAI*RLHMPCSAYRH
Trigger: ATGCCTATAGGCACTACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp TCGGAGGTATCCGAGCTGCAGCAAACTGAGAGGCCCTaGGCATGTGAAACTGAGATAAAGCAGCAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SEVSELQQTERP*ACETEIKQQCV
Trigger: CACACACTGCTGCTTTATCTCAGTTTCACATGCCAAGGGCCTCTCAGTTTGCTGCAGCTCGGATACCTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp AGAGGAGCTGGCTTGCTCATTGTGGCTGAACATGACTaGCGGAGTACTGTGGATGGAATAGGCAGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: RGAGLLIVAEHD*RSTVDGIGRLG
Trigger: ACCCAACCTGCCTATTCCATCCACAGTACTCCGCAAGTCATGTTCAGCCACAATGAGCAAGCCAGCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp TGTCAGTGCGCTTTATGGCATCTTGCTTGGCCTCACTCTGGGTCTTaGAAGCCCAAGGTCTGTTGTAGGGATCCAGTGTCTGTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: CQCALWHLAWPHSGS*KPKVCCRDPVSVCA
Trigger: AGCACACACAGACACTGGATCCCTACAACAGACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp ACCTTGTCAGAGGCTGTAGGAAGCCATAGGTGCTGCCTGTGCTTTTaGGGCCTACATGTTCTACAACTGACCATTTCCCTAGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: TLSEAVGSHRCCLCF*GLHVLQLTISLGPP
Trigger: TGGTGGCCCTAGGGAAATGGTCAGTTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGCACCTATGGCTTCCTACAGCCTCTGACAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp GTTTGGTTATTGGCATTATCCTGTGTGGTTCAGGTACAGGGTGGTTaGACGGTTGAGAGGTGGGATACATGGGCCATCTGGAGGCTGCAT +
Preference number: 6 (lower is better)
Translates to: VWLLALSCVVQVQGG*TVERWDTWAIWRLH
Trigger: ATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCGTCAAACCACCCTGTACCTGAACCACACAGGATAATGCCAATAACCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 90 bp GTGGCTGAACATGACTTGCGGAGTACTGTGGATGGAATAGGCAGGTaGGGTCGGATCTTAGTCTGTGTGGAAGTTGTCACAACAGGCATC +
Preference number: 6 (lower is better)
Translates to: VAEHDLRSTVDGIGR*GRILVCVEVVTTGI
Trigger: GATGCCTGTTGTGACAACTTCCACACAGACTAAGATCCGACCCAACCTGCCTATTCCATCCACAGTACTCCGCAAGTCATGTTCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 72 bp CTTTATGGCATCTTGCTTGGCCTCACTCTGGGTCTTTaGAGCCCAAGGTCTGTTGTAGGGATCCAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: LYGILLGLTLGL*SPRSVVGIQCL
Trigger: CAGACACTGGATCCCTACAACAGACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 72 bp CGGTTGAGAGGTGGGATACATGGGCCATCTGGAGGCTaGATATGCCATGTAGTGCCTATAGGCATCAAAAGA +
Preference number: 6 (lower is better)
Translates to: RLRGGIHGPSGG*ICHVVPIGIKR
Trigger: TCTTTTGATGCCTATAGGCACTACATGGCATATGCAGCCTCCAGATGGCCCATGTATCCCACCTCTCAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 72 bp TTTGGTTTCTCACTAAGTTTGCGCTTTAGCTCACTCTaGCGTCGCCGTTCTGTCTCTAGGACCACAGCCAAG +
Preference number: 6 (lower is better)
Translates to: FGFSLSLRFSSL*RRRSVSRTTAK
Trigger: CTTGGCTGTGGTCCTAGAGACAGAACGGCGACGGCAGAGTGAGCTAAAGCGCAAACTTAGTGAGAAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp CAGTTCTCGAAACTCAGGGTCGAGAAACCTAGGACTTaGGCTTCTTCTACGCTGTCGATAGTTGCGAGTTCC +
Preference number: 6 (lower is better)
Translates to: QFSKLRVEKPRT*ASSTLSIVASS
Trigger: GGAACTCGCAACTATCGACAGCGTAGAAGAAGCCCAAGTCCTAGGTTTCTCGACCCTGAGTTTCGAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp GCTTTATGGCATCTTGCTTGGCCTCACTCTGGGTCTTaGAAGCCCAAGGTCTGTTGTAGGGATCCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: ALWHLAWPHSGS*KPKVCCRDPVS
Trigger: AGACACTGGATCCCTACAACAGACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp AGTCACAGTGGGGATCACACGAAGATTGGGACGGCTACGAGTAGCTaGTTTGGTTATTGGCATTATCCTGTGTGGTTCAGGTACAGGGTG +
Preference number: 6 (lower is better)
Translates to: SHSGDHTKIGTATSS*FGYWHYPVWFRYRV
Trigger: CACCCTGTACCTGAACCACACAGGATAATGCCAATAACCAAACAAGCTACTCGTAGCCGTCCCAATCTTCGTGTGATCCCCACTGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 90 bp AAGGTGTTAAGAGGAGCTGGCTTGCTCATTGTGGCTGAACATGACTaGCGGAGTACTGTGGATGGAATAGGCAGGTTGGGTCGGATCTTA +
Preference number: 6 (lower is better)
Translates to: KVLRGAGLLIVAEHD*RSTVDGIGRLGRIL
Trigger: TAAGATCCGACCCAACCTGCCTATTCCATCCACAGTACTCCGCAAGTCATGTTCAGCCACAATGAGCAAGCCAGCTCCTCTTAACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 72 bp TTCGGTAGTCCTCATCAAGTTGTCCCAAGAAGGGACTaGGAGGCCCTTCCTCCTGGGAAATATATCGCTCAA +
Preference number: 6 (lower is better)
Translates to: FGSPHQVVPRRD*EALPPGKYIAQ
Trigger: TTGAGCGATATATTTCCCAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGACAACTTGATGAGGACTACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp CCCGGCTCCTTTCTTCAGATCGTATGGAGTAGCCTTTaGGTTTTTCTCGATTCCGTTCTGTTCCCCGCAACA +
Preference number: 6 (lower is better)
Translates to: PGSFLQIVWSSL*VFLDSVLFPAT
Trigger: TGTTGCGGGGAACAGAACGGAATCGAGAAAAACTCAAAGGCTACTCCATACGATCTGAAGAAAGGAGCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp TGGGCTTCTTCTACGCTGTCGATAGTTGCGAGTTCCTaGTGTAAAACTTGGGTGATCCCCTCCCATGCTGTT +
Preference number: 6 (lower is better)
Translates to: WASSTLSIVASS*CKTWVIPSHAV
Trigger: AACAGCATGGGAGGGGATCACCCAAGTTTTACATCAGGAACTCGCAACTATCGACAGCGTAGAAGAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp GCTGATGGCAACATGCACCTGACTGCAACAGATGACTaGAACCCACTACCAACCACCTCTGGTCCTGAAATA +
Preference number: 6 (lower is better)
Translates to: ADGNMHLTATDD*NPLPTTSGPEI
Trigger: TATTTCAGGACCAGAGGTGGTTGGTAGTGGGTTTCAGTCATCTGTTGCAGTCAGGTGCATGTTGCCATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp ATTGTCTTCAATTACCTGCTCCCTTGGAGGGGACCTTaGCACTGGAGCTTTAACCAAATTCAGAGGGTCGCC +
Preference number: 6 (lower is better)
Translates to: IVFNYLLPWRGP*HWSFNQIQRVA
Trigger: GGCGACCCTCTGAATTTGGTTAAAGCTCCAGTGTCAAGGTCCCCTCCAAGGGAGCAGGTAATTGAAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 72 bp GGAACAGTTATCTTGTCAGTGCGCTTTATGGCATCTTaGTTGGCCTCACTCTGGGTCTTTGAAGCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: GTVILSVRFMAS*LASLWVFEAQG
Trigger: ACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACAAGATAACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 72 bp ACAACCTTGTCAGAGGCTGTAGGAAGCCATAGGTGCTaGCTGTGCTTTTTGGGCCTACATGTTCTACAACTG +
Preference number: 6 (lower is better)
Translates to: TTLSEAVGSHRC*LCFLGLHVLQL
Trigger: CAGTTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGCACCTATGGCTTCCTACAGCCTCTGACAAGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp CTAAGCCGTCGCCGTTCTGGTGTGCTAACACAGAAGTaGTCATTGCCAACAGTGATCCTTAAGCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: LSRRRSGVLTQK*SLPTVILKLFS
Trigger: GGAAAAGAGCTTAAGGATCACTGTTGGCAATGACCACTTCTGTGTTAGCACACCAGAACGGCGACGGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp CAGGAAAGTTTCTTTTGTTCGGTAGTCCTCATCAAGTaGTCCCAAGAAGGGACTGAGAGGCCCTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: QESFFCSVVLIK*SQEGTERPFLL
Trigger: CAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGACAACTTGATGAGGACTACCGAACAAAAGAAACTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp CTTGCCATGAAGTCGTTCCTGGGTGCGTGCAGCCAATaGACTAATCTCTGCTACTCCAATATCCAGCCCTAT +
Preference number: 6 (lower is better)
Translates to: LAMKSFLGACSQ*TNLCYSNIQPY
Trigger: ATAGGGCTGGATATTGGAGTAGCAGAGATTAGTCAATTGGCTGCACGCACCCAGGAACGACTTCATGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp GGGGATCACACGAAGATTGGGACGGCTACGAGTAGCTaGTTTGGTTATTGGCATTATCCTGTGTGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: GDHTKIGTATSS*FGYWHYPVWFR
Trigger: CCTGAACCACACAGGATAATGCCAATAACCAAACAAGCTACTCGTAGCCGTCCCAATCTTCGTGTGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp ACAGTTATCTTGTCAGTGCGCTTTATGGCATCTTGCTaGGCCTCACTCTGGGTCTTTGAAGCCCAAGGTCTG +
Preference number: 6 (lower is better)
Translates to: TVILSVRFMASC*ASLWVFEAQGL
Trigger: CAGACCTTGGGCTTCAAAGACCCAGAGTGAGGCCAAGCAAGATGCCATAAAGCGCACTGACAAGATAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp GAGGCTGTAGGAAGCCATAGGTGCTGCCTGTGCTTTTaGGGCCTACATGTTCTACAACTGACCATTTCCCTA +
Preference number: 6 (lower is better)
Translates to: EAVGSHRCCLCF*GLHVLQLTISL
Trigger: TAGGGAAATGGTCAGTTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGCACCTATGGCTTCCTACAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp ACAGTGGGGATCACACGAAGATTGGGACGGCTACGAGTAGCTTGTTaGGTTATTGGCATTATCCTGTGTGGTTCAGGTACAGGGTGGTTT +
Preference number: 6 (lower is better)
Translates to: TVGITRRLGRLRVAC*VIGIILCGSGTGWF
Trigger: AAACCACCCTGTACCTGAACCACACAGGATAATGCCAATAACCAAACAAGCTACTCGTAGCCGTCCCAATCTTCGTGTGATCCCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp CTCATCAGAGATCTTCTCTGGATTATATCTTATGAGTaGTGGAATGGACACCTGGACAGGCACTTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: LIRDLLWIISYE*WNGHLDRHLGR
Trigger: GCGGCCCAAGTGCCTGTCCAGGTGTCCATTCCATCACTCATAAGATATAATCCAGAGAAGATCTCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 72 bp TCGTTCCTGGGTGCGTGCAGCCAATTGACTAATCTCTaGTACTCCAATATCCAGCCCTATTGTCTTGAGCAA +
Preference number: 6 (lower is better)
Translates to: SFLGACSQLTNL*YSNIQPYCLEQ
Trigger: TTGCTCAAGACAATAGGGCTGGATATTGGAGTAGCAGAGATTAGTCAATTGGCTGCACGCACCCAGGAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS GCA 72 bp TCCCACAGATGGTGTTGCAGTCTTTGCACCAGTGATTaGCAGCATCATAATACTCATAAGCAGCAGTGGGCT +
Preference number: 6 (lower is better)
Translates to: SHRWCCSLCTSD*QHHNTHKQQWA
Trigger: AGCCCACTGCTGCTTATGAGTATTATGATGCTGGCAATCACTGGTGCAAAGACTGCAACACCATCTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361428.3
ENST00000605935.5
ENST00000606599.1
CDS GCA 72 bp TTGTCAGAGGCTGTAGGAAGCCATAGGTGCTGCCTGTaGTTTTTGGGCCTACATGTTCTACAACTGACCATT +
Preference number: 6 (lower is better)
Translates to: LSEAVGSHRCCL*FLGLHVLQLTI
Trigger: AATGGTCAGTTGTAGAACATGTAGGCCCAAAAAGCACAGGCAGCACCTATGGCTTCCTACAGCCTCTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 72 bp ACACACTTTCTGACACAAGACAGTTGGGGATCTATGTaGTGGGCTTACCCGAGTAGTGCAGAAATCAACAGG +
Preference number: 6 (lower is better)
Translates to: THFLTQDSWGSM*WAYPSSAEINR
Trigger: CCTGTTGATTTCTGCACTACTCGGGTAAGCCCAGCACATAGATCCCCAACTGTCTTGTGTCAGAAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 72 bp ACCAAATTCAGAGGGTCGCCACTGTCATCATCTACTTaGAGAATTGCCACCTCTGTGGTGGATGCATTCGAT +
Preference number: 6 (lower is better)
Translates to: TKFRGSPLSSST*RIATSVVDAFD
Trigger: ATCGAATGCATCCACCACAGAGGTGGCAATTCTGCAAGTAGATGATGACAGTGGCGACCCTCTGAATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp CACTTTCTGACACAAGACAGTTGGGGATCTATGTGCTaGGCTTACCCGAGTAGTGCAGAAATCAACAGGCAT +
Preference number: 6 (lower is better)
Translates to: HFLTQDSWGSMC*AYPSSAEINRH
Trigger: ATGCCTGTTGATTTCTGCACTACTCGGGTAAGCCCAGCACATAGATCCCCAACTGTCTTGTGTCAGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp CGTCGCCGTTCTGGTGTGCTAACACAGAAGTGGTCATaGCCAACAGTGATCCTTAAGCTCTTTTCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: RRRSGVLTQKWS*PTVILKLFSKE
Trigger: CTCTTTGGAAAAGAGCTTAAGGATCACTGTTGGCAATGACCACTTCTGTGTTAGCACACCAGAACGGCGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp AGCAGCGACCAAACCCTCATCTTGATGCAACTCCTCTaGGGATGCACTGCTGTTCAAAGGAGAAGTAGAAGA +
Preference number: 6 (lower is better)
Translates to: SSDQTLILMQLL*GCTAVQRRSRR
Trigger: TCTTCTACTTCTCCTTTGAACAGCAGTGCATCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGGTCGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp GTTGCTAACTATAGGAGCAGCGACCAAACCCTCATCTaGATGCAACTCCTCTTGGGATGCACTGCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: VANYRSSDQTLI*MQLLLGCTAVQ
Trigger: TTGAACAGCAGTGCATCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGGTCGCTGCTCCTATAGTTAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp AGGGCCACCAGAGTTTTTGCAATGGGCTTTTCAGAGTaGCTAACTATAGGAGCAGCGACCAAACCCTCATCT +
Preference number: 6 (lower is better)
Translates to: RATRVFAMGFSE*LTIGAATKPSS
Trigger: AGATGAGGGTTTGGTCGCTGCTCCTATAGTTAGCAACTCTGAAAAGCCCATTGCAAAAACTCTGGTGGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp AACCAAATTCAGAGGGTCGCCACTGTCATCATCTACTaGCAGAATTGCCACCTCTGTGGTGGATGCATTCGA +
Preference number: 6 (lower is better)
Translates to: NQIQRVATVIIY*QNCHLCGGCIR
Trigger: TCGAATGCATCCACCACAGAGGTGGCAATTCTGCAAGTAGATGATGACAGTGGCGACCCTCTGAATTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp TTCTGCTTAGGCTTATCAGGAGTCACAGTGGGGATCACACGAAGATaGGGACGGCTACGAGTAGCTTGTTTGGTTATTGGCATTATCCTG +
Preference number: 6 (lower is better)
Translates to: FCLGLSGVTVGITRR*GRLRVACLVIGIIL
Trigger: CAGGATAATGCCAATAACCAAACAAGCTACTCGTAGCCGTCCCAATCTTCGTGTGATCCCCACTGTGACTCCTGATAAGCCTAAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 90 bp AGATCGATGCAGGAAAGTTTCTTTTGTTCGGTAGTCCTCATCAAGTaGTCCCAAGAAGGGACTGAGAGGCCCTTCCTCCTGGGAAATATA +
Preference number: 6 (lower is better)
Translates to: RSMQESFFCSVVLIK*SQEGTERPFLLGNI
Trigger: TATATTTCCCAGGAGGAAGGGCCTCTCAGTCCCTTCTTGGGACAACTTGATGAGGACTACCGAACAAAAGAAACTTTCCTGCATCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 90 bp CTTTTCAGAGTTGCTAACTATAGGAGCAGCGACCAAACCCTCATCTaGATGCAACTCCTCTTGGGATGCACTGCTGTTCAAAGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: LFRVANYRSSDQTLI*MQLLLGCTAVQRRS
Trigger: ACTTCTCCTTTGAACAGCAGTGCATCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGGTCGCTGCTCCTATAGTTAGCAACTCTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 72 bp TCCGTTCTGTTCCCCGCAACAGCTCATCATGACAACTaGTATGGGGACTATAATCAGATCGATGCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: SVLFPATAHHDN*YGDYNQIDAGK
Trigger: CTTTCCTGCATCGATCTGATTATAGTCCCCATATCAGTTGTCATGATGAGCTGTTGCGGGGAACAGAACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp GAAGCCAGGGCTGAGAGTCTGAGATACAACTGGGTTTaGTTTTACTGGAGCCAAGATAGCATTTGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: EARAESLRYNWV*FYWSQDSICLS
Trigger: GCTCAAGCAAATGCTATCTTGGCTCCAGTAAAATCAAACCCAGTTGTATCTCAGACTCTCAGCCCTGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 72 bp TTGCTAACTATAGGAGCAGCGACCAAACCCTCATCTTaGTGCAACTCCTCTTGGGATGCACTGCTGTTCAAA +
Preference number: 6 (lower is better)
Translates to: LLTIGAATKPSS*CNSSWDALLFK
Trigger: TTTGAACAGCAGTGCATCCCAAGAGGAGTTGCATCAAGATGAGGGTTTGGTCGCTGCTCCTATAGTTAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS GCA 72 bp GGTTTCTATCCCTGCCTTTCTGGGGGCAGAAATGTCTaGTGCAGTCCTTCCTTTTGGAAATCTGAAGACTTT +
Preference number: 6 (lower is better)
Translates to: GFYPCLSGGRNV*CSPSFWKSEDF
Trigger: AAAGTCTTCAGATTTCCAAAAGGAAGGACTGCAGCAGACATTTCTGCCCCCAGAAAGGCAGGGATAGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000605935.5
ENST00000606599.1
ENST00000607252.5
CDS CCA 72 bp TGTTTATCTTCACTGTGTCATCATAACGGGGTCTTTTaGCCTCCCGGCTCCTTTCTTCAGATCGTATGGAGT +
Preference number: 6 (lower is better)
Translates to: CLSSLCHHNGVF*PPGSFLQIVWS
Trigger: ACTCCATACGATCTGAAGAAAGGAGCCGGGAGGCCAAAAGACCCCGTTATGATGACACAGTGAAGATAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp AAGATTGGGACGGCTACGAGTAGCTTGTTTGGTTATTaGCATTATCCTGTGTGGTTCAGGTACAGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: KIGTATSSLFGY*HYPVWFRYRVV
Trigger: AACCACCCTGTACCTGAACCACACAGGATAATGCCAATAACCAAACAAGCTACTCGTAGCCGTCCCAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp CCCCAACTCCAGGGAACTACATTTAGAAGGGTCACCTaGCTCAGAGAGTGGAGAACACAGTTTATCTTTTTG +
Preference number: 6 (lower is better)
Translates to: PQLQGTTFRRVT*LREWRTQFIFL
Trigger: CAAAAAGATAAACTGTGTTCTCCACTCTCTGAGCCAGGTGACCCTTCTAAATGTAGTTCCCTGGAGTTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp ACCAGAAACTCAGAGCCTTTTGCAGGAACAGTTATCTaGTCAGTGCGCTTTATGGCATCTTGCTTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: TRNSEPFAGTVI*SVRFMASCLAS
Trigger: TGAGGCCAAGCAAGATGCCATAAAGCGCACTGACAAGATAACTGTTCCTGCAAAAGGCTCTGAGTTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp TTAGCATTGGCTGTGGCTAAGCATGAATTTCGCTTCTCTAATTTTTaGGCTTGTTCACTGAACACACTTGAGAGGGGTGGTGGAGGACGT +
Preference number: 6 (lower is better)
Translates to: LALAVAKHEFRFSNF*ACSLNTLERGGGGR
Trigger: ACGTCCTCCACCACCCCTCTCAAGTGTGTTCAGTGAACAAGCCAAAAAATTAGAGAAGCGAAATTCATGCTTAGCCACAGCCAATGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp GGAACTAGAGGTCCATATGGCCAAAGTGTCTGTCTTTaGGGTAATTGTTTCATAAGGCCTGCTTTGGCACAA +
Preference number: 6 (lower is better)
Translates to: GTRGPYGQSVCL*GNCFIRPALAQ
Trigger: TTGTGCCAAAGCAGGCCTTATGAAACAATTACCCCAAAGACAGACACTTTGGCCATATGGACCTCTAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp CTCTTCTCTGGAGATATATCCCTACTAGTGTCACTCTaGAAGGAACTAGAGGTCCATATGGCCAAAGTGTCT +
Preference number: 6 (lower is better)
Translates to: LFSGDISLLVSL*KELEVHMAKVS
Trigger: AGACACTTTGGCCATATGGACCTCTAGTTCCTTCCAGAGTGACACTAGTAGGGATATATCTCCAGAGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp ATCACACGAAGATTGGGACGGCTACGAGTAGCTTGTTaGGTTATTGGCATTATCCTGTGTGGTTCAGGTACA +
Preference number: 6 (lower is better)
Translates to: ITRRLGRLRVAC*VIGIILCGSGT
Trigger: TGTACCTGAACCACACAGGATAATGCCAATAACCAAACAAGCTACTCGTAGCCGTCCCAATCTTCGTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp CCCTCAGAGAGTTGGTCTTCTAATTTCTCAGAGACCTaGTCATCCTCCTTTACTTCTTTCACAGCCTTTGCC +
Preference number: 6 (lower is better)
Translates to: PSESWSSNFSET*SSSFTSFTAFA
Trigger: GGCAAAGGCTGTGAAAGAAGTAAAGGAGGATGACAAGGTCTCTGAGAAATTAGAAGACCAACTCTCTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp AGCCCTATTGTCTTGAGCAAGTCATGGATCTTCGCATATTCTGGATaGGTCTCTTCTAGTGATTCTAGCTTTACAGCTGGAGCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: SPIVLSKSWIFAYSG*VSSSDSSFTAGAED
Trigger: GTCTTCAGCTCCAGCTGTAAAGCTAGAATCACTAGAAGAGACCAATCCAGAATATGCGAAGATCCATGACTTGCTCAAGACAATAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS TCA 72 bp GGATCCAGTGTCTGTGTGTGCTTCTTATTGTGCATATaGGTGAAGAAATCAAACATGGTCCCACAGATGGTG +
Preference number: 6 (lower is better)
Translates to: GSSVCVCFLLCI*VKKSNMVPQMV
Trigger: CACCATCTGTGGGACCATGTTTGATTTCTTCACTCATATGCACAATAAGAAGCACACACAGACACTGGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS TCA 72 bp ATTGCCCCTGTGTGTGCTTCTTATTGTGCATATGAGTaGAGAAATCAAACATGGTCCCACAGATGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: IAPVCASYCAYE*RNQTWSHRWCC
Trigger: GCAACACCATCTGTGGGACCATGTTTGATTTCTTCACTCATATGCACAATAAGAAGCACACACAGGGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS TCA 72 bp TGGAATTGCCCCTGTGTGTGCTTCTTATTGTGCATATaGGTGAAGAAATCAAACATGGTCCCACAGATGGTG +
Preference number: 6 (lower is better)
Translates to: WNCPCVCFLLCI*VKKSNMVPQMV
Trigger: CACCATCTGTGGGACCATGTTTGATTTCTTCACTCATATGCACAATAAGAAGCACACACAGGGGCAATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605935.5
ENST00000606599.1
CDS GCA 72 bp TTCTCTAGCCCCTCCTCACTAACAACTGAAACTCCTTaGTCTTGTGGACTACCTGTTAAACACATAGCTGAT +
Preference number: 6 (lower is better)
Translates to: FSSPSSLTTETP*SCGLPVKHIAD
Trigger: ATCAGCTATGTGTTTAACAGGTAGTCCACAAGAGCAAGGAGTTTCAGTTGTTAGTGAGGAGGGGCTAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CCA 72 bp TGGACTGTTCAGCCTCTTTGTCAATCATTAGCAAGTTaGGCTGTTTTACTTCTCCCTCCCACATGTATCTGT +
Preference number: 6 (lower is better)
Translates to: WTVQPLCQSLAS*AVLLLPPTCIC
Trigger: ACAGATACATGTGGGAGGGAGAAGTAAAACAGCCCAACTTGCTAATGATTGACAAAGAGGCTGAACAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp GGGGACTATAATCAGATCGATGCAGGAAAGTTTCTTTaGTTCGGTAGTCCTCATCAAGTTGTCCCAAGAAGG +
Preference number: 6 (lower is better)
Translates to: GDYNQIDAGKFL*FGSPHQVVPRR
Trigger: CCTTCTTGGGACAACTTGATGAGGACTACCGAACAAAAGAAACTTTCCTGCATCGATCTGATTATAGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp TCGGCAGGCTTGGGGCTCTTAGTACGAAACTTCTCATaGTTTACTTTTGATTCCTTGTTGGAGGAGGAGTTT +
Preference number: 6 (lower is better)
Translates to: SAGLGLLVRNFS*FTFDSLLEEEF
Trigger: AAACTCCTCCTCCAACAAGGAATCAAAAGTAAACAATGAGAAGTTTCGTACTAAGAGCCCCAAGCCTGCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp GCTGTGGCTAAGCATGAATTTCGCTTCTCTAATTTTTaGGCTTGTTCACTGAACACACTTGAGAGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: AVAKHEFRFSNF*ACSLNTLERGG
Trigger: ACCACCCCTCTCAAGTGTGTTCAGTGAACAAGCCAAAAAATTAGAGAAGCGAAATTCATGCTTAGCCACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp TCTGTGTGTCGCTCAGGTCCCTCAGCCTTCAAATCCAAATTATCCTaGTGGCATAGAAAACTTCCAAATTTTTCTCTGAGAGGACTGTTG +
Preference number: 6 (lower is better)
Translates to: SVCRSGPSAFKSKLS*WHRKLPNFSLRGLL
Trigger: CAACAGTCCTCTCAGAGAAAAATTTGGAAGTTTTCTATGCCACAAGGATAATTTGGATTTGAAGGCTGAGGGACCTGAGCGACACACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp ACTCCAATATCCAGCCCTATTGTCTTGAGCAAGTCATaGATCTTCGCATATTCTGGATTGGTCTCTTCTAGT +
Preference number: 6 (lower is better)
Translates to: TPISSPIVLSKS*IFAYSGLVSSS
Trigger: ACTAGAAGAGACCAATCCAGAATATGCGAAGATCCATGACTTGCTCAAGACAATAGGGCTGGATATTGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CCA 72 bp CTGTTTCCATGGTTCAAATTAGAATCATCTATGCTGTaGGGTCCAATGCTGGTACTTACTCCCTCATCAACT +
Preference number: 6 (lower is better)
Translates to: LFPWFKLESSML*GPMLVLTPSST
Trigger: AGTTGATGAGGGAGTAAGTACCAGCATTGGACCCCACAGCATAGATGATTCTAATTTGAACCATGGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp GTCTTGAGCAAGTCATGGATCTTCGCATATTCTGGATaGGTCTCTTCTAGTGATTCTAGCTTTACAGCTGGA +
Preference number: 6 (lower is better)
Translates to: VLSKSWIFAYSG*VSSSDSSFTAG
Trigger: TCCAGCTGTAAAGCTAGAATCACTAGAAGAGACCAATCCAGAATATGCGAAGATCCATGACTTGCTCAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp CTAATCTCTGCTACTCCAATATCCAGCCCTATTGTCTaGAGCAAGTCATGGATCTTCGCATATTCTGGATTG +
Preference number: 6 (lower is better)
Translates to: LISATPISSPIV*SKSWIFAYSGL
Trigger: CAATCCAGAATATGCGAAGATCCATGACTTGCTCAAGACAATAGGGCTGGATATTGGAGTAGCAGAGATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361428.3
ENST00000605935.5
CDS CAA 72 bp GGCTTTGCCTTCCCAGCTTCAGTTTTGCCATCCTCTTaGTCCTTACTACTTTCTAGAATCTCTTCTTTAGAG +
Preference number: 6 (lower is better)
Translates to: GFAFPASVLPSS*SLLLSRISSLE
Trigger: CTCTAAAGAAGAGATTCTAGAAAGTAGTAAGGACAAAGAGGATGGCAAAACTGAAGCTGGGAAGGCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp TGTCTCTATCTCACTTTCTCTACAATCCTCAGATTTACGGAGCTCTaGGCTTTCCTTATCCTGGTTAACAGATTCTCTGAGGTGGATTTC +
Preference number: 6 (lower is better)
Translates to: CLYLTFSTILRFTEL*AFLILVNRFSEVDF
Trigger: GAAATCCACCTCAGAGAATCTGTTAACCAGGATAAGGAAAGCCAAGAGCTCCGTAAATCTGAGGATTGTAGAGAAAGTGAGATAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp CCAGAGAGCTTGATTTTGATAGGCTTTGCCTTCCCAGCTTCAGTTTaGCCATCCTCTTTGTCCTTACTACTTTCTAGAATCTCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: PESLILIGFAFPASV*PSSLSLLLSRISSL
Trigger: TAAAGAAGAGATTCTAGAAAGTAGTAAGGACAAAGAGGATGGCAAAACTGAAGCTGGGAAGGCAAAGCCTATCAAAATCAAGCTCTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp ATCAATTTATTGGACTGTTCAGCCTCTTTGTCAATCATTAGCAAGTaGGGCTGTTTTACTTCTCCCTCCCACATGTATCTGTTTCCATGG +
Preference number: 6 (lower is better)
Translates to: INLLDCSASLSIISK*GCFTSPSHMYLFPW
Trigger: CCATGGAAACAGATACATGTGGGAGGGAGAAGTAAAACAGCCCAACTTGCTAATGATTGACAAAGAGGCTGAACAGTCCAATAAATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 90 bp ATTTTGATAGGCTTTGCCTTCCCAGCTTCAGTTTTGCCATCCTCTTaGTCCTTACTACTTTCTAGAATCTCTTCTTTAGAGATACTTGGG +
Preference number: 6 (lower is better)
Translates to: ILIGFAFPASVLPSS*SLLLSRISSLEILG
Trigger: CCCAAGTATCTCTAAAGAAGAGATTCTAGAAAGTAGTAAGGACAAAGAGGATGGCAAAACTGAAGCTGGGAAGGCAAAGCCTATCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp GTTTTCATCCACATATTTCTTGTATTTCTCATTGTGTaGGTGACCCTTCACATGTTGCTCCCCAGAAATTGG +
Preference number: 6 (lower is better)
Translates to: VFIHIFLVFLIV*VTLHMLLPRNW
Trigger: CCAATTTCTGGGGAGCAACATGTGAAGGGTCACCAACACAATGAGAAATACAAGAAATATGTGGATGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361428.3
CDS CAA 72 bp CTTCCTGTCATCAATTTATTGGACTGTTCAGCCTCTTaGTCAATCATTAGCAAGTTGGGCTGTTTTACTTCT +
Preference number: 6 (lower is better)
Translates to: LPVINLLDCSAS*SIISKLGCFTS
Trigger: AGAAGTAAAACAGCCCAACTTGCTAATGATTGACAAAGAGGCTGAACAGTCCAATAAATTGATGACAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361428.3