Pregenerated sensors for ZNF25-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000226447Ensembl transcript IDs: ENST00000412789.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCACGGAGTTCAATCACTTTAACAAAACTGCCCATCAGTGTTCCTTaGAGCACCTCACGGTGGATTTCTGTCTTCAAGCCCAGACGTGCA | + |
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Preference number: 5 (lower is better) Translates to: PRSSITLTKLPISVP*STSRWISVFKPRRA Trigger: TGCACGTCTGGGCTTGAAGACAGAAATCCACCGTGAGGTGCTCCAAGGAACACTGATGGGCAGTTTTGTTAAAGTGATTGAACTCCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412789.1 |
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| CDS CAA 90 bp | CCCACGGAGTTCAATCACTTTAACAAAACTGCCCATCAGTGTTCCTaGGAGCACCTCACGGTGGATTTCTGTCTTCAAGCCCAGACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PTEFNHFNKTAHQCS*EHLTVDFCLQAQTC Trigger: GCACGTCTGGGCTTGAAGACAGAAATCCACCGTGAGGTGCTCCAAGGAACACTGATGGGCAGTTTTGTTAAAGTGATTGAACTCCGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412789.1 |
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| CDS CAA 72 bp | TATATGGAATCTGTGACTGTTCTTCCAAGCGGGGACTaGAGGAGTCTGAGCTTGATAAAGAGAGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: YMESVTVLPSGD*RSLSLIKRASW Trigger: CCAGCTGGCTCTCTTTATCAAGCTCAGACTCCTCAAGTCCCCGCTTGGAAGAACAGTCACAGATTCCATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412789.1 |
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| CDS CCA 72 bp | TCAATCACTTTAACAAAACTGCCCATCAGTGTTCCTTaGAGCACCTCACGGTGGATTTCTGTCTTCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SITLTKLPISVP*STSRWISVFKP Trigger: GGGCTTGAAGACAGAAATCCACCGTGAGGTGCTCCAAGGAACACTGATGGGCAGTTTTGTTAAAGTGATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412789.1 |
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| CDS TCA 72 bp | AAGAACAGTTTTATTCCTTATGCGTTTGCACAATTGTaGAAGCTAGCATTCCTAAGAGGAAGCGGTTACAGG | + |
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Preference number: 6 (lower is better) Translates to: KNSFIPYAFAQL*KLAFLRGSGYR Trigger: CCTGTAACCGCTTCCTCTTAGGAATGCTAGCTTTCACAATTGTGCAAACGCATAAGGAATAAAACTGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412789.1 |
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