Pregenerated sensors for ZNF22 (Homo sapiens)
Ensembl gene IDs: ENSG00000165512Ensembl transcript IDs: ENST00000298299.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCAAAGGAGCTACAATGTACTGACACATTACGACTCTTGTTGTTaGCAAACATTTAAGCAGGGCTATCCAAAGCTCACAGTCTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: FQRSYNVLTHYDSCC*QTFKQGYPKLTVLK Trigger: CTTCAAGACTGTGAGCTTTGGATAGCCCTGCTTAAATGTTTGTCAACAACAAGAGTCGTAATGTGTCAGTACATTGTAGCTCCTTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR TCA 90 bp | CATGTAACACAGAAAGAGTTAAATTTCAAAGGAGCTACAATGTACTaGCACATTACGACTCTTGTTGTTGACAAACATTTAAGCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: HVTQKELNFKGATMY*HITTLVVDKHLSRA Trigger: AGCCCTGCTTAAATGTTTGTCAACAACAAGAGTCGTAATGTGTCAGTACATTGTAGCTCCTTTGAAATTTAACTCTTTCTGTGTTACATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTGGGAAGTAATTTCAAATaGGGTCAAGGATGTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: QKRSRAWGCIDMNPSQLVGSNFK*GQGCHA Trigger: AGCATGACATCCTTGACCTCATTTGAAATTACTTCC...CACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTAGAAATGAGGGTAGCTaGACTCATGTAATTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PEEVKGMGMYRHESIPTCRNEGS*THVISF Trigger: GAAAGAAATTACATGAGTCCAGCTACCCTCATTTCT...ACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR-3UTR CCA 90 bp | AAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAGGAATAGAAAAACTGAGTAGTCATTaGCATGCCTGCACTTTCACA | + |
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Preference number: 2 (lower is better) Translates to: KQTTQQLPSQRTLLVGIEKLSSH*HACTFT Trigger: TGTGAAAGTGCAGGCATGCCAATGACTACTCAGTTT...TTCTATTCCTACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR-3UTR GCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAGGTCAAGGATGTCATaGTCCCTCAAAACATATTTT | + |
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Preference number: 2 (lower is better) Translates to: NLWKTNDTAVTITKNSISRSRMS*SLKTYF Trigger: AAAATATGTTTTGAGGGAGCATGACATCCTTGACCT...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR CCA 72 bp | CAGAGCACAGGAGAATGCCAGAAGAGGTCAAGGGCATaGGGATGTATCGACATGAATCCATCCCAACTTGTG | + |
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Preference number: 3 (lower is better) Translates to: QSTGECQKRSRA*GCIDMNPSQLV Trigger: CACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTGGCATTCTCCTGTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR TCA 72 bp | AGCTACAATGTACTGACACATTACGACTCTTGTTGTTaGCAAACATTTAAGCAGGGCTATCCAAAGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: SYNVLTHYDSCC*QTFKQGYPKLT Trigger: TGTGAGCTTTGGATAGCCCTGCTTAAATGTTTGTCAACAACAAGAGTCGTAATGTGTCAGTACATTGTAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTGCCCCACTTCTGCCGCTaGCGGCCTGTTTTGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QKRSRAWGCIDMNPSQLVPHFCR*RPVLRL Trigger: CAAGCGCAAAACAGGCCGGCAGCGGCAGAAGTGGGG...CACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTGACCAGCCACCACTCTaGCTCGCTGGGCGCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISDQPPL*LAGRLP Trigger: CGGGAGGCGCCCAGCGAGCCAGAGTGGTGGCTGGTC...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | CCAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTAGTGAGTCTTCACCCTaGTATTTTTGCCCCGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PEEVKGMGMYRHESIPTCSESSP*YFCPGF Trigger: AAACCCGGGGCAAAAATATCAGGGTGAAGACTCACT...ACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | CAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTGCCATTCTCATGGAAGTaGAGAAACATGTTTGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: QKRSRAWGCIDMNPSQLVPFSWK*RNMFAG Trigger: TCCGGCAAACATGTTTCTTCACTTCCATGAGAATGG...CACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | CCAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTGTGCTGAATGAGATTTaGGCTCTGTTTGAAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PEEVKGMGMYRHESIPTCVLNEI*ALFEAF Trigger: GAAAGCTTCAAACAGAGCTCAAATCTCATTCAGCAC...ACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTGGTGGGAGCTCTGGCTaGAACACCGGCCACACTCAT | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISGGSSG*NTGHTH Trigger: ATGAGTGTGGCCGGTGTTTCAGCCAGAGCTCCCACC...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR GCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTGTCATGCCCCACTTCTaGCGCTGCCGGCCTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISVMPHF*RCRPVL Trigger: CAAAACAGGCCGGCAGCGGCAGAAGTGGGGCATGAC...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | CCAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTATCCATCCCAACTTGTaGAAAACAAACGACACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PEEVKGMGMYRHESIPTCIHPNL*KTNDTA Trigger: TGCTGTGTCGTTTGTTTTCCACAAGTTGGGATGGAT...ACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTGGCCTTTCCTTGGCTTaGGCTCCGAGAAATACCCGC | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIGLSLA*APRNTR Trigger: GCGGGTATTTCTCGGAGCTCAAGCCAAGGAAAGGCC...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR GCA 90 bp | AAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAGGAATAGAAGCTGCCGGCCTGTTTTaGGCTTGTTCTCATAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KQTTQQLPSQRTLLVGIEAAGLF*ACSHRP Trigger: AGGCCTATGAGAACAAGCGCAAAACAGGCCGGCAGC...TTCTATTCCTACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | AAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAGGAATAGAAATAAGGTGGGAGCTCTaGCTGAAACACCGGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: KQTTQQLPSQRTLLVGIEIRWEL*LKHRPH Trigger: GTGTGGCCGGTGTTTCAGCCAGAGCTCCCACCTTAT...TTCTATTCCTACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| 3UTR CAA 72 bp | TTGTTTATTCATGTAGATCTAAAAGGCTGGCTCAGTTaGTCAGAGCACAGGAGAATGCCAGAAGAGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LFIHVDLKGWLS*SEHRRMPEEVK Trigger: CTTGACCTCTTCTGGCATTCTCCTGTGCTCTGACAAACTGAGCCAGCCTTTTAGATCTACATGAATAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTGGGCTCATTAGAGTCTaGCACTTGGCACCATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISGLIRV*HLAPFS Trigger: TGAGAATGGTGCCAAGTGTCAGACTCTAATGAGCCC...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTGGGGATGTATCGACATaGATCCATCCCAACTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIGDVST*IHPNLW Trigger: CCACAAGTTGGGATGGATTCATGTCGATACATCCCC...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR GCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTGGCTTCTCTTCTTTATaGACCTTCATGTGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIGFSSL*TFMCCL Trigger: GAGGCAGCACATGAAGGTGCATAAAGAAGAGAAGCC...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAAGAGGTCAAGGGCATaGGGATGTATCGACATGAAT | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISKRSRA*GCIDMN Trigger: ATTCATGTCGATACATCCCCATGCCCTTGACCTCTT...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTGTAGATCTAAAAGGCTaGCTCAGTTTGTCAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISVDLKG*LSLSEH Trigger: GTGCTCTGACAAACTGAGCCAGCCTTTTAGATCTAC...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTGGAGCTACAATGTACTaGCACATTACGACTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISGATMY*HITTLV Trigger: AACAAGAGTCGTAATGTGTCAGTACATTGTAGCTCC...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAAACTGAGTAGTCATTaGCATGCCTGCACTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISKLSSH*HACTFT Trigger: TGTGAAAGTGCAGGCATGCCAATGACTACTCAGTTT...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | AACTTGTGGAAAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTTTAGAGTCTGACACTTaGCACCATTCTCATGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: NLWKTNDTAVTITKNSISLESDT*HHSHGS Trigger: ACTTCCATGAGAATGGTGCCAAGTGTCAGACTCTAA...ACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTTTCCACAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTGATTTGAGCTCTGTTTaGAGCTTTCTCCACACTCAT | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIDLSSV*SFLHTH Trigger: ATGAGTGTGGAGAAAGCTTCAAACAGAGCTCAAATC...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | AAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAGGAATAGAATTCCAAGAGGGTAAGTaGGTCTTCACCCTGATATTT | + |
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Preference number: 4 (lower is better) Translates to: KQTTQQLPSQRTLLVGIEFQEGK*VFTLIF Trigger: AAATATCAGGGTGAAGACTCACTTACCCTCTTGGAA...TTCTATTCCTACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTTACGACTCTTGTTGTTaGCAAACATTTAAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIYDSCC*QTFKQG Trigger: GCCCTGCTTAAATGTTTGTCAACAACAAGAGTCGTA...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTGAGTCTACTGAAGCTTaGGTCAAATCGAATAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIESTEA*VKSNSH Trigger: ATGACTATTCGATTTGACTCAAGCTTCAGTAGACTC...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | AAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAGGAATAGAAGGAAGTAATTTCAAATaGGGTCAAGGATGTCATGCT | + |
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Preference number: 4 (lower is better) Translates to: KQTTQQLPSQRTLLVGIEGSNFK*GQGCHA Trigger: AGCATGACATCCTTGACCTCATTTGAAATTACTTCC...TTCTATTCCTACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | AAACAAACGACACAGCAGTTACCATCACAAAGAACTCTATTAGTAGGAATAGAATTTACAGGCTTCTTCTaGACTAGTGTTTCATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KQTTQQLPSQRTLLVGIEFTGFF*TSVSFP Trigger: AGGAAATGAAACACTAGTTCAGAAGAAGCCTGTAAA...TTCTATTCCTACTAATAGAGTTCTTTGTGATGGTAACTGCTGTGTCGTTTGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR TCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTGTGTTGAAAAAGAGTTaGACTCTGACTGAAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIVLKKS*TLTETL Trigger: AAGAGTTTCAGTCAGAGTTCAACTCTTTTTCAACAC...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CCA 90 bp | ACTCTATTAGTAGGAATAGAAGACTTGAGGTCCAATTCAGTTCTCATTTGGATTAGAAATGAGGGTAGCTaGACTCATGTAATTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLLVGIEDLRSNSVLIWIRNEGS*THVISF Trigger: GAAAGAAATTACATGAGTCCAGCTACCCTCATTTCT...AATCCAAATGAGAACTGAATTGGACCTCAAGTCTTCTATTCCTACTAATAGAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CAA 90 bp | CAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTGAGGCCTTTCCTTGGCTaGAGCTCCGAGAAATACCCG | + |
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Preference number: 5 (lower is better) Translates to: QKRSRAWGCIDMNPSQLVRPFLG*SSEKYP Trigger: CGGGTATTTCTCGGAGCTCAAGCCAAGGAAAGGCCT...CACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CAA 90 bp | CCAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTAAAGGCTGGCTCAGTTaGTCAGAGCACAGGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: PEEVKGMGMYRHESIPTCKGWLS*SEHRRM Trigger: CATTCTCCTGTGCTCTGACAAACTGAGCCAGCCTTT...ACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS TCA 90 bp | TTTATAGGGTTTGTCATCCAAGCTTCTTCTGAGTCTACTGAAGCTTaGGTCAAATCGAATAGTCATGCCCCACTTCTGCCGCTGCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: FIGFVIQASSESTEA*VKSNSHAPLLPLPA Trigger: GGCCGGCAGCGGCAGAAGTGGGGCATGACTATTCGATTTGACTCAAGCTTCAGTAGACTCAGAAGAAGCTTGGATGACAAACCCTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS-3UTR CAA 90 bp | CAGAAGAGGTCAAGGGCATGGGGATGTATCGACATGAATCCATCCCAACTTGTGAGTGAAGAAACATGTTaGCCGGACTCCTTAAAACAA | + |
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Preference number: 5 (lower is better) Translates to: QKRSRAWGCIDMNPSQLVSEETC*PDSLKQ Trigger: TTGTTTTAAGGAGTCCGGCAAACATGTTTCTTCACT...CACAAGTTGGGATGGATTCATGTCGATACATCCCCATGCCCTTGACCTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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| CDS TCA 72 bp | TTTGTCATCCAAGCTTCTTCTGAGTCTACTGAAGCTTaGGTCAAATCGAATAGTCATGCCCCACTTCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: FVIQASSESTEA*VKSNSHAPLLP Trigger: CGGCAGAAGTGGGGCATGACTATTCGATTTGACTCAAGCTTCAGTAGACTCAGAAGAAGCTTGGATGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298299.4 |
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