RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF217 (Homo sapiens)

Ensembl gene IDs: ENSG00000171940

Ensembl transcript IDs: ENST00000302342.3, ENST00000371471.7, ENST00000431687.5, ENST00000437222.1, ENST00000540425.1

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTAAAAATCCTACAAGCCATCCCAACGCCCTCAGTCAAGGATCCTaGAGGTTCCAGGACAATCTGGAGAGGCGAGGAAGAAGGTGCCTT +
Preference number: 1 (lower is better)
Translates to: LKNPTSHPNALSQGS*RFQDNLERRGRRCL
Trigger: AAGGCACCTTCTTCCTCGCCTCTCCAGATTGTCCTGGAACCTCCAGGATCCTTGACTGAGGGCGTTGGGATGGCTTGTAGGATTTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
3UTR-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCCTGCCAGCTTCCGAATaGCTGACCTCGATATCTGCA +
Preference number: 2 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSLPASE*LTSISA
Trigger: TGCAGATATCGAGGTCAGCCATTCGGAAGCTGGCAG...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
3UTR-3UTR GCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGCTCTACAGAGAAAATaGTTGTCTGTAGACACACTC +
Preference number: 2 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSALQRK*LSVDTL
Trigger: GAGTGTGTCTACAGACAAGCATTTTCTCTGTAGAGC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
3UTR-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCTGTTTATACAACGTGTaGCTGCTCTACAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSCLYNV*LLYREN
Trigger: ATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACA...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
3UTR-3UTR CAA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTCTACAGAGAAAATGCTaGTCTGTAGACACACTCTCT +
Preference number: 3 (lower is better)
Translates to: SRLPAGSASSSLFKINVSLQRKC*SVDTLS
Trigger: AGAGAGTGTGTCTACAGACAAGCATTTTCTCTGTAG...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
3UTR GCA 72 bp AATGCTGCCAGCTTCCGAATGGCTGACCTCGATATCTaGAGCACATATCATAGAGGGTCAATACTTCCATTA +
Preference number: 3 (lower is better)
Translates to: NAASFRMADLDI*STYHRGSILPL
Trigger: TAATGGAAGTATTGACCCTCTATGATATGTGCTGCAGATATCGAGGTCAGCCATTCGGAAGCTGGCAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
3UTR-3UTR CAA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGAATACACACAGTATTaGAACAAGCAGGTTTACAAC +
Preference number: 3 (lower is better)
Translates to: SRLPAGSASSSLFKINVSEYTQY*NKQVYN
Trigger: GTTGTAAACCTGCTTGTTCAAATACTGTGTGTATTC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTCAGATTGCTGTTGCCTaGTGGCGGCCCCTTGGACCC +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSQIAVA*WRPLGP
Trigger: GGGTCCAAGGGGCCGCCACCAGGCAACAGCAATCTG...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTCAGATGGCAGGGATTTaGACTGCGCCGGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSQMAGI*TAPGKQ
Trigger: CTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTG...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGCTGAGGGATGCATCTaGCAGGCTTCTTCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSAEGCI*QASSPF
Trigger: AAACGGGGAAGAAGCCTGTCAGATGCATCCCTCAGC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTAACCCGAAGAACTGCTaGTTCACAGAGGGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSNPKNC*FTEGRP
Trigger: CGGCCTACCCTCTGTGAACCAGCAGTTCTTCGGGTT...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGCGTCCACAGACATGGTaGGCGACTCCGCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLRPQTW*ATPRRP
Trigger: GGGCCGGCGCGGAGTCGCCCACCATGTCTGTGGACG...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATCCCGTCCACAGACATaGTGGGCGACTCCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQSRPQT*WATPRR
Trigger: CCGGCGCGGAGTCGCCCACCATGTCTGTGGACGGGA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGGCCCAGGAGGGCTCTaGTTCCCCTTCGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTGPGGL*FPFADG
Trigger: GCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGGGCC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTCGTCCACAGACATGGTaGGCGACTCCGCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSRPQTW*ATPRRP
Trigger: GGGCCGGCGCGGAGTCGCCCACCATGTCTGTGGACG...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTCCCGTCCACAGACATaGTGGGCGACTCCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIASRPQT*WATPRR
Trigger: CCGGCGCGGAGTCGCCCACCATGTCTGTGGACGGGA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGGTCTTCTGAATGTGTaGAGGTCTGGCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSGLLNV*RSGCRT
Trigger: TGTTCTGCAGCCAGACCTTCACACATTCAGAAGACC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTCGGACTGAGATACTCTaGTTCAACCCGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSRTEIL*FNPKNC
Trigger: GCAGTTCTTCGGGTTGAAGCAGAGTATCTCAGTCCG...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAATGCTCTCGGCCGCGTaGACCTGGACGACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQMLSAA*TWTTSL
Trigger: CAACGAGGTCGTCCAGGTGCACGCGGCCGAGAGCAT...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGAGTGGGCTTCTCCTTaGTACTGGGTAACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSEWASP*YWVTWD
Trigger: ATCCCAAGTTACCCAGTAGCAAGGAGAAGCCCACTC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCAGATTGCTGTTGCCTaGTGGCGGCCCCTTGGACCC +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTQIAVA*WRPLGP
Trigger: GGGTCCAAGGGGCCGCCACCAGGCAACAGCAATCTG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGGTTCTGTTCGCACTTaGCTTTTATCAAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSGSVRT*LLSSGL
Trigger: CAGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCTGCCGAGGGTGGGCTaGGAAGGAGCTACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTLPRVG*EGATGR
Trigger: TCTTCCAGTAGCTCCTTCTCAGCCCACCCTCGGCAG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTGAACACGTCCCCGGCTaGCTCCCGTCCACAGACATG +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAEHVPG*LPSTDM
Trigger: CATGTCTGTGGACGGGAGGCAGCCGGGGACGTGTTC...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATCGGCCGCGTGCACCTaGACGACCTCGTTGATCGTT +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQSAACT*TTSLIV
Trigger: AACGATCAACGAGGTCGTCCAGGTGCACGCGGCCGA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATTTTCCCAGCAACGCTaGCGGGCATCCGGTACGTCG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQFSQQR*RASGTS
Trigger: CGACGTACCGGATGCCCGCCAGCGTTGCTGGGAAAA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTACTGGTGGCGGCCCCTTaGACCCCCACATTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLLVAAP*TPTFCC
Trigger: ACAGCAGAATGTGGGGGTCCAAGGGGCCGCCACCAG...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAATTGCTGTTGCCTGGTaGCGGCCCCTTGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLIAVAW*RPLGPP
Trigger: TGGGGGTCCAAGGGGCCGCCACCAGGCAACAGCAAT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGTCAGGAACCTTGGTTTaGGAGGCAGCGCCTGCGACG +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTSGTLV*EAAPAT
Trigger: CGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGA...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGCTGGTGGTAGGTTCTaGAAGCTTTGCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTAGGRF*KLCRTR
Trigger: CCGAGTGCGGCAAAGCTTTCAGAACCTACCACCAGC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTTTTTACCATCGTTCTTaGCTTCAGCAGCAACATCGG +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSFYHRS*LQQQHR
Trigger: CCGATGTTGCTGCTGAAGTCAAGAACGATGGTAAAA...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGCTGCCGAGGGTGGGCTaGGAAGGAGCTACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLLPRVG*EGATGR
Trigger: TCTTCCAGTAGCTCCTTCTCAGCCCACCCTCGGCAG...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGTGTAAGGAGAGGAGATaGTCTCGGCCGCGTGCACCT +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTCKERR*SRPRAP
Trigger: AGGTGCACGCGGCCGAGAGCATCTCCTCTCCTTACA...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTCACTTGGCCTGTATCTaGAGTCAGCTGCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLHLACI*SQLRSP
Trigger: CGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTG...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAGGCCCAGGAGGGCTCTaGTTCCCCTTCGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQGPGGL*FPFADG
Trigger: GCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGGGCC...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGGGATTTCCAAACCCTaGGGCTCCGGCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFGISKP*GSGSSA
Trigger: GGCCGAGGAGCCGGAGCCGCAGGGTTTGGAAATCCC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371471.7
CDS-3UTR CCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACTCGGCCGCGTGCACCTaGACGACCTCGTTGATCGTT +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNSAACT*TTSLIV
Trigger: AACGATCAACGAGGTCGTCCAGGTGCACGCGGCCGA...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCGGCATTCCTCCTTGTaGAGAGTCTGTCTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTRHSSL*RVCLRA
Trigger: AGCGCGCAGACAGACTCTCCACAAGGAGGAATGCCG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTGCCAGCTGCCAAGCCTaGAAGGTGGTGAACGGATCG +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCASCQA*KVVNGS
Trigger: CGATCCGTTCACCACCTTCCAGGCTTGGCAGCTGGC...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATGCTACTGGGTAACTTaGGATCCGCGTCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQCYWVT*DPRPRR
Trigger: CCTCCGTGGACGCGGATCCCAAGTTACCCAGTAGCA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTTTTTCCCAGCAACGCTaGCGGGCATCCGGTACGTCG +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCFSQQR*RASGTS
Trigger: CGACGTACCGGATGCCCGCCAGCGTTGCTGGGAAAA...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAATTGCTGTTGCCTGGTaGCGGCCCCTTGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREIAVAW*RPLGPP
Trigger: TGGGGGTCCAAGGGGCCGCCACCAGGCAACAGCAAT...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTCAGGAACCTTGGTTTaGGAGGCAGCGCCTGCGACG +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLSGTLV*EAAPAT
Trigger: CGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACGTCGAGCTGGATGCTaGACTACCAGCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQRRAGC*TTSRHT
Trigger: TGTGTGCCTGCTGGTAGTCCAGCATCCAGCTCGACG...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR TCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGTGAACGGATCGAGCTaGGGGATGCATCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLVNGSS*GMHLTG
Trigger: GCCTGTCAGATGCATCCCTCAGCTCGATCCGTTCAC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAATCTTTGTGTGCTGGTaGGAGGACAGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLIFVCW*EDSAAQ
Trigger: CTGGGCAGCGCTGTCCTCTCACCAGCACACAAAGAT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTATGAGGTTATTTGCCTaGGTTTCAACTGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSMRLFA*VSTADL
Trigger: GAGATCAGCAGTTGAAACTCAGGCAAATAACCTCAT...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTGCTAGAGTCTATCCCTaGAGTCAGAGGGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCARVYP*SQRGLA
Trigger: GGCAAGGCCCCTCTGACTTCAGGGATAGACTCTAGC...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTCAGCTTCCGAATGGCTaGCCTCGATATCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLQLPNG*PRYLQH
Trigger: GTGCTGCAGATATCGAGGTCAGCCATTCGGAAGCTG...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTAGCCTTGCTGCAGTTTaGTTCTGGCCCCCGATTTGC +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLSLAAV*FWPPIC
Trigger: GCAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCT...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAAGCCTTGCTGCAGTTTaGTTCTGGCCCCCGATTTGC +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQSLAAV*FWPPIC
Trigger: GCAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCT...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCTCTCCAAGCCTTGCTaGAGTTTGCTTCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCLSKPC*SLLLAP
Trigger: GGGGGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTATGCTCTCGGCCGCGTaGACCTGGACGACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFMLSAA*TWTTSL
Trigger: CAACGAGGTCGTCCAGGTGCACGCGGCCGAGAGCAT...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGTGTGCACCTTGCGGTaGTCAATTAGACTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSVCTLR*SIRLSL
Trigger: TAAAGAAAGTCTAATTGAGCACCGCAAGGTGCACAC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATGTGGAGAGTCTGTCTaGGCGCTGCTGGTACCGAAA +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQCGESV*ALLVPK
Trigger: TTTCGGTACCAGCAGCGCGCAGACAGACTCTCCACA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCCTTTGGTAGCCAGCTaGCAAGCCTGGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAPLVAS*QAWKVV
Trigger: CACCACCTTCCAGGCTTGGCAGCTGGCTACCAAAGG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCACTTGGCCTGTATCTaGAGTCAGCTGCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAHLACI*SQLRSP
Trigger: CGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTTGCTCCAGTCTCTGGTaGATCATTAAAACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSCSSLW*IIKTSG
Trigger: TCCAGAAGTTTTAATGATGCACCAGAGACTGGAGCA...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTTCAGGATTGTATTTATaGTCCAGTCTCTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSSGLYL*SSLWCI
Trigger: GATGCACCAGAGACTGGAGCATAAATACAATCCTGA...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGGCAGGGATTTGGACTaGGCCGGGAAAGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLGRDLD*AGKADL
Trigger: CAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAGTCTCTTCCCGGAGGTaGCCACGGGCTGTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREVSSRR*PRAVVL
Trigger: AAGAACGACAGCCCGTGGGCACCTCCGGGAAGAGAC...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGTCTCTTCCCGGAGGTaGCCACGGGCTGTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSVSSRR*PRAVVL
Trigger: AAGAACGACAGCCCGTGGGCACCTCCGGGAAGAGAC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAAACCCGAAGAACTGCTaGTTCACAGAGGGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQNPKNC*FTEGRP
Trigger: CGGCCTACCCTCTGTGAACCAGCAGTTCTTCGGGTT...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCGGCATTCCTCCTTGTaGAGAGTCTGTCTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIARHSSL*RVCLRA
Trigger: AGCGCGCAGACAGACTCTCCACAAGGAGGAATGCCG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGAGGGCGCTTCGCCGTaGGAGTGTTTGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLEGASP*ECLHFS
Trigger: AGAGAAGTGCAAACACTCCCACGGCGAAGCGCCCTC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTGCTACTGGGTAACTTaGGATCCGCGTCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLCYWVT*DPRPRR
Trigger: CCTCCGTGGACGCGGATCCCAAGTTACCCAGTAGCA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCTCCGGTCCTTCTTGTaGACCCTGGAGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIALRSFL*TLECKT
Trigger: GGTCTTGCACTCCAGGGTCCACAAGAAGGACCGGAG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTACTCCGGTCCTTCTTGTaGACCCTGGAGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLLRSFL*TLECKT
Trigger: GGTCTTGCACTCCAGGGTCCACAAGAAGGACCGGAG...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGTGGCGGCCCCTTaGACCCCCACATTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQLVAAP*TPTFCC
Trigger: ACAGCAGAATGTGGGGGTCCAAGGGGCCGCCACCAG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTACGGGCTGTCGTTCTTaGCGGGGTAGTCGATGGAAC +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCTGCRS*RGSRWN
Trigger: GTTCCATCGACTACCCCGCCAAGAACGACAGCCCGT...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTACGGGCTGTCGTTCTTaGCGGGGTAGTCGATGGAAC +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIATGCRS*RGSRWN
Trigger: GTTCCATCGACTACCCCGCCAAGAACGACAGCCCGT...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTAGCCTCTTCTGTAATTaGCCCCGGGCTGGTCAACGT +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLSLFCN*PRAGQR
Trigger: ACGTTGACCAGCCCGGGGCCAATTACAGAAGAGGCT...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACACACAAGTGTAAAGTaGCCCGGAGCCACCATAGGG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQHTSVK*PGATIG
Trigger: CCCTATGGTGGCTCCGGGCCACTTTACACTTGTGTG...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGCGTCGAGCTGGATGCTaGACTACCAGCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLRRAGC*TTSRHT
Trigger: TGTGTGCCTGCTGGTAGTCCAGCATCCAGCTCGACG...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR TCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTAGCGGTCCCTTTCATTaGCAAGGCATCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLSGPFH*QGILHL
Trigger: GAGATGGAGGATGCCTTGTCAATGAAAGGGACCGCT...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTACCTGGACGACCTCGTTaGTCGTTGCTGGACTACTCT +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLPGRPR*SLLDYS
Trigger: AGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGG...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCCTGGACGACCTCGTTaGTCGTTGCTGGACTACTCT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCPGRPR*SLLDYS
Trigger: AGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGTGAACGGATCGAGCTaGGGGATGCATCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSVNGSS*GMHLTG
Trigger: GCCTGTCAGATGCATCCCTCAGCTCGATCCGTTCAC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTAGTCGATGGAACCATTaGTGTTACTGCTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLSRWNH*CYCCRG
Trigger: CCCTCGGCAGCAGTAACATCAATGGTTCCATCGACT...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAAGTCGATGGAACCATTaGTGTTACTGCTGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQSRWNH*CYCCRG
Trigger: CCCTCGGCAGCAGTAACATCAATGGTTCCATCGACT...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCAGCTTCCGAATGGCTaGCCTCGATATCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAQLPNG*PRYLQH
Trigger: GTGCTGCAGATATCGAGGTCAGCCATTCGGAAGCTG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCCATCTCCATCGGACTaGCAAGAGAGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTPSPSD*QESCQS
Trigger: TGATTGGCAGCTCTCTTGGCAGTCCGATGGAGATGG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTCTACTCTCCAAGCCTTaGTGCAGTTTGCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLLLSKP*CSLLLA
Trigger: GGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAGTAG...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTGACCTCGTTGATCGTTaGTGGACTACTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLDLVDR*WTTLQA
Trigger: GGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTC...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGAGTCTGTCTGCGCGCTaGTGGTACCGAAAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTSLSAR*WYRKQF
Trigger: AAACTGCTTTCGGTACCAGCAGCGCGCAGACAGACT...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTGTGGAGAGTCTGTCTaGGCGCTGCTGGTACCGAAA +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLCGESV*ALLVPK
Trigger: TTTCGGTACCAGCAGCGCGCAGACAGACTCTCCACA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAGGCATCTCCTTAAGCTaGTTTGCAGGTGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQGISLS*FAGGLP
Trigger: AGGCAGTCCACCTGCAAAGCAGCTTAAGGAGATGCC...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAGCTGCGGTCTCCGTTTaGTTCTCTTTGGGGCTAACT +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQAAVSV*FSLGLT
Trigger: AGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGC...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGTATCTGCAGTCAGCTaGGGTCTCCGTTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTVSAVS*GLRLLL
Trigger: GAGAAGCAAACGGAGACCGCAGCTGACTGCAGATAC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAGGCAGGGATTTGGACTaGGCCGGGAAAGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREGRDLD*AGKADL
Trigger: CAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCC...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTGGACCCCCACATTCTaGTGTGGTCTGTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAWTPTF*CGLWDF
Trigger: GAAGTCCCACAGACCACAGCAGAATGTGGGGGTCCA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAATCTCAGATTGCTGTTaGCTGGTGGCGGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREISDCC*LVAAPW
Trigger: CCAAGGGGCCGCCACCAGGCAACAGCAATCTGAGAT...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGGAAACATCTCAGATTaGTGTTGCCTGGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLGNISD*CCLVAA
Trigger: GGCCGCCACCAGGCAACAGCAATCTGAGATGTTTCC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTGGAAACATCTCAGATTaGTGTTGCCTGGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAGNISD*CCLVAA
Trigger: GGCCGCCACCAGGCAACAGCAATCTGAGATGTTTCC...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGCCAGCTGCCAAGCCTaGAAGGTGGTGAACGGATCG +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSASCQA*KVVNGS
Trigger: CGATCCGTTCACCACCTTCCAGGCTTGGCAGCTGGC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTGCTTCTCCTTGCTACTaGGTAACTTGGGATCCGCGT +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLASPCY*VTWDPR
Trigger: ACGCGGATCCCAAGTTACCCAGTAGCAAGGAGAAGC...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCCTTCTTGTGGACCCTaGAGTGCAAGACCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCPSCGP*SARPAG
Trigger: ACCAGCTGGTCTTGCACTCCAGGGTCCACAAGAAGG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCCTTCTTGTGGACCCTaGAGTGCAAGACCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNPSCGP*SARPAG
Trigger: ACCAGCTGGTCTTGCACTCCAGGGTCCACAAGAAGG...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTATCTTTTCAAATTTTTaGTTTGCGCACTGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSIFSNF*FAHCQR
Trigger: CCGCTGACAGTGCGCAAACCAAAAATTTGAAAAGAT...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTCTTCAAGGTTATGGGTaGTACTGCCATCCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLLQGYG*YCHPEE
Trigger: CTCCTCCGGATGGCAGTACCACCCATAACCTTGAAG...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCTTCAAGGTTATGGGTaGTACTGCCATCCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTLQGYG*YCHPEE
Trigger: CTCCTCCGGATGGCAGTACCACCCATAACCTTGAAG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTCAGATGGCAGGGATTTaGACTGCGCCGGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSQMAGI*TAPGKQ
Trigger: CTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTG...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACAGCCTCTTCTGTAATTaGCCCCGGGCTGGTCAACGT +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNSLFCN*PRAGQR
Trigger: ACGTTGACCAGCCCGGGGCCAATTACAGAAGAGGCT...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAATCAGGAACCTTGGTTTaGGAGGCAGCGCCTGCGACG +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQSGTLV*EAAPAT
Trigger: CGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGA...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTTCTAACGTCGAGCTaGATGCTGGACTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQLLTSS*MLDYQQ
Trigger: CTGCTGGTAGTCCAGCATCCAGCTCGACGTTAGAAG...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR TCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGAGCGGTCCCTTTCATTaGCAAGGCATCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLSGPFH*QGILHL
Trigger: GAGATGGAGGATGCCTTGTCAATGAAAGGGACCGCT...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAGCTGAGGGATGCATCTaGCAGGCTTCTTCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREAEGCI*QASSPF
Trigger: AAACGGGGAAGAAGCCTGTCAGATGCATCCCTCAGC...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGCTGGTGGTAGGTTCTaGAAGCTTTGCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSAGGRF*KLCRTR
Trigger: CCGAGTGCGGCAAAGCTTTCAGAACCTACCACCAGC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTATCTTTGTGTGCTGGTaGGAGGACAGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFIFVCW*EDSAAQ
Trigger: CTGGGCAGCGCTGTCCTCTCACCAGCACACAAAGAT...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACATTGCCGGGCAATTGTaGAGAGCCCCCACGGATAAA +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNIAGQL*RAPTDK
Trigger: TTTATCCGTGGGGGCTCTTCACAATTGCCCGGCAAT...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGCTAGAGTCTATCCCTaGAGTCAGAGGGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSARVYP*SQRGLA
Trigger: GGCAAGGCCCCTCTGACTTCAGGGATAGACTCTAGC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCGGACTGAGATACTCTaGTTCAACCCGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTRTEIL*FNPKNC
Trigger: GCAGTTCTTCGGGTTGAAGCAGAGTATCTCAGTCCG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTCTCCAAGCCTTGCTaGAGTTTGCTTCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQLSKPC*SLLLAP
Trigger: GGGGGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGACCTCGTTGATCGTTaGTGGACTACTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLDLVDR*WTTLQA
Trigger: GGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCTGTAAGGAGAGGAGATaGTCTCGGCCGCGTGCACCT +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSCKERR*SRPRAP
Trigger: AGGTGCACGCGGCCGAGAGCATCTCCTCTCCTTACA...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTAGTCTGTCTGCGCGCTaGTGGTACCGAAAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIASLSAR*WYRKQF
Trigger: AAACTGCTTTCGGTACCAGCAGCGCGCAGACAGACT...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTCCTTTGGTAGCCAGCTaGCAAGCCTGGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFPLVAS*QAWKVV
Trigger: CACCACCTTCCAGGCTTGGCAGCTGGCTACCAAAGG...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTCGGTGCTCCCTTCTTaGCCCGATTCCTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIASVLPS*PDSFTS
Trigger: AGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGAATCGTCGTTGTCGGTaGTCCCTTCTTGCCCCGATT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLNRRCR*SLLAPI
Trigger: AATCGGGGCAAGAAGGGAGCACCGACAACGACGATT...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTAATCGTCGTTGTCGGTaGTCCCTTCTTGCCCCGATT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCNRRCR*SLLAPI
Trigger: AATCGGGGCAAGAAGGGAGCACCGACAACGACGATT...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCACTTCTCTTTCTCTTaGGAGAGGCCTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTHFSFS*ERPAQL
Trigger: CAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTTTCAAATTTTTGGTTTaGGCACTGTCAGCGGTTAAT +
Preference number: 4 (lower is better)
Translates to: SRLPAGSASSSLFKINVSFKFLV*ALSAVN
Trigger: ATTAACCGCTGACAGTGCGCAAACCAAAAATTTGAA...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACGGCATCTCCTTAAGCTaGTTTGCAGGTGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNGISLS*FAGGLP
Trigger: AGGCAGTCCACCTGCAAAGCAGCTTAAGGAGATGCC...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACGCTGCGGTCTCCGTTTaGTTCTCTTTGGGGCTAACT +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNAAVSV*FSLGLT
Trigger: AGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGC...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGTATCTGCAGTCAGCTaGGGTCTCCGTTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLVSAVS*GLRLLL
Trigger: GAGAAGCAAACGGAGACCGCAGCTGACTGCAGATAC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTTGGACCCCCACATTCTaGTGTGGTCTGTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSWTPTF*CGLWDF
Trigger: GAAGTCCCACAGACCACAGCAGAATGTGGGGGTCCA...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTCACCAAATTCTGCTaGAGTATTGCTGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQLTKFC*SIAGTP
Trigger: CGGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAG...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGAGGGCGCTTCGCCGTaGGAGTGTTTGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFEGASP*ECLHFS
Trigger: AGAGAAGTGCAAACACTCCCACGGCGAAGCGCCCTC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCCTTCCCCTTCGCAGATaGCAGGGATTTGGACTGCGC +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSLPLRR*QGFGLR
Trigger: GCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAG...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCCCCACATTCTGCTGTaGTCTGTGGGACTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCPHILL*SVGLQV
Trigger: AACCTGAAGTCCCACAGACCACAGCAGAATGTGGGG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTGAGAATCGACCTCGCTaGAGCTCAGGAACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAENRPR*SSGTLV
Trigger: AACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTC...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTCACACAAGTGTAAAGTaGCCCGGAGCCACCATAGGG +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSHTSVK*PGATIG
Trigger: CCCTATGGTGGCTCCGGGCCACTTTACACTTGTGTG...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACGTCGAGCTGGATGCTaGACTACCAGCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQRRAGC*TTSRHT
Trigger: TGTGTGCCTGCTGGTAGTCCAGCATCCAGCTCGACG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGCTTCTAACGTCGAGCTaGATGCTGGACTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLLLTSS*MLDYQQ
Trigger: CTGCTGGTAGTCCAGCATCCAGCTCGACGTTAGAAG...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTACTGCCAGCTTCCGAATaGCTGACCTCGATATCTGCA +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLLPASE*LTSISA
Trigger: TGCAGATATCGAGGTCAGCCATTCGGAAGCTGGCAG...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGGTTCCAGGACAATCTaGAGAGGCGAGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLGSRTI*RGEEEG
Trigger: ACCTTCTTCCTCGCCTCTCCAGATTGTCCTGGAACC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAACCATCTCCATCGGACTaGCAAGAGAGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREPSPSD*QESCQS
Trigger: TGATTGGCAGCTCTCTTGGCAGTCCGATGGAGATGG...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTTTCAACCCGAAGAACTaGTGGTTCACAGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCFNPKN*WFTEGR
Trigger: CCTACCCTCTGTGAACCAGCAGTTCTTCGGGTTGAA...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCTGGCCCCCGATTTaGCATTATGTGTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLFWPPI*HYVSAC
Trigger: ACATGCGGACACATAATGGCAAATCGGGGGCCAGAA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTTCGGTGCTCCCTTCTTaGCCCGATTCCTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSSVLPS*PDSFTS
Trigger: AGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGA...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCTCTTGCGAGAGGCCTaGACAACTGCCCTTATTTGT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCLLREA*TTALIC
Trigger: ACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGCACTTCTCTTTCTCTTaGGAGAGGCCTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLHFSFS*ERPAQL
Trigger: CAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTG...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTACTCACCAAATTCTGCTaGAGTATTGCTGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLLTKFC*SIAGTP
Trigger: CGGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAG...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGGGCTCACCAAATTCTaGTGCAGTATTGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLGLTKF*CSIAGT
Trigger: AGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGGGCTCACCAAATTCTaGTGCAGTATTGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLGLTKF*CSIAGT
Trigger: AGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAGGATACACACAGTCCTaGGGTAACAGTGATGTGATG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQGYTQS*GNSDVM
Trigger: CATCACATCACTGTTACCGCAGGACTGTGTGTATCC...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGCTGACCTCGATATCTaGAGCACATATCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTADLDI*STYHRG
Trigger: CCCTCTATGATATGTGCTGCAGATATCGAGGTCAGC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGTTGTGTAGCTCGGAATaGAACAACAGCGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTLCSSE*NNSGPF
Trigger: AAAGGGACCGCTGTTGTTCCATTCCGAGCTACACAA...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGCTGCAGTTTGCTTCTaGCCCCCGATTTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLAAVCF*PPICHY
Trigger: ATAATGGCAAATCGGGGGCCAGAAGCAAACTGCAGC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTACTCGTTGATCGTTGCTaGACTACTCTCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLLVDRC*TTLQAL
Trigger: CAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAG...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACTTCTGCTGTGGTCTGTaGGACTTCAGGTTACTTGGG +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNFCCGL*DFRLLG
Trigger: CCCAAGTAACCTGAAGTCCCACAGACCACAGCAGAA...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTATTCTGCTGTGGTCTGTaGGACTTCAGGTTACTTGGG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLFCCGL*DFRLLG
Trigger: CCCAAGTAACCTGAAGTCCCACAGACCACAGCAGAA...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCAGCCTCTTCTGTAATTaGCCCCGGGCTGGTCAACGT +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSSLFCN*PRAGQR
Trigger: ACGTTGACCAGCCCGGGGCCAATTACAGAAGAGGCT...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGAGAATCGACCTCGCTaGAGCTCAGGAACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSENRPR*SSGTLV
Trigger: AACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTAACAGTCAGCACATTTaGAGAATCGACCTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLNSQHI*RIDLAG
Trigger: TCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTT...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAAACAGTCAGCACATTTaGAGAATCGACCTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQNSQHI*RIDLAG
Trigger: TCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTT...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAACTTCTAACGTCGAGCTaGATGCTGGACTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRELLTSS*MLDYQQ
Trigger: CTGCTGGTAGTCCAGCATCCAGCTCGACGTTAGAAG...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAACTGCCAGCTTCCGAATaGCTGACCTCGATATCTGCA +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRELPASE*LTSISA
Trigger: TGCAGATATCGAGGTCAGCCATTCGGAAGCTGGCAG...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGGTTCCAGGACAATCTaGAGAGGCGAGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSGSRTI*RGEEEG
Trigger: ACCTTCTTCCTCGCCTCTCCAGATTGTCCTGGAACC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGGTCTTCTGAATGTGTaGAGGTCTGGCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSGLLNV*RSGCRT
Trigger: TGTTCTGCAGCCAGACCTTCACACATTCAGAAGACC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGTTTTATCAAGCGGACTaGGATACTCTGCTTCAACCC +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTFYQAD*DTLLQP
Trigger: GGGTTGAAGCAGAGTATCTCAGTCCGCTTGATAAAA...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGGTTCTGTTCGCACTTaGCTTTTATCAAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLGSVRT*LLSSGL
Trigger: CAGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACGAAACCAAGGCTCCTTaGATCTTCTTCCGCACATGT +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNETKAP*IFFRTC
Trigger: ACATGTGCGGAAGAAGATTCAAGGAGCCTTGGTTTC...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGAAACCAAGGCTCCTTaGATCTTCTTCCGCACATGT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLETKAP*IFFRTC
Trigger: ACATGTGCGGAAGAAGATTCAAGGAGCCTTGGTTTC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACTTCCCCGTTTCAGGGTaGGATTTTGGTCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNFPVSG*DFGLKL
Trigger: CAACTTGAGACCAAAATCTCACCCTGAAACGGGGAA...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTATTGCCGGGCAATTGTaGAGAGCCCCCACGGATAAA +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFIAGQL*RAPTDK
Trigger: TTTATCCGTGGGGGCTCTTCACAATTGCCCGGCAAT...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTTTCAACCCGAAGAACTaGTGGTTCACAGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSFNPKN*WFTEGR
Trigger: CCTACCCTCTGTGAACCAGCAGTTCTTCGGGTTGAA...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGCGACTCTAAATGTCTaGCCACATACCTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLATLNV*PHTSQL
Trigger: TAGCTGTGAGGTATGTGGGCAGACATTTAGAGTCGC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTACTCTCCAAGCCTTaGTGCAGTTTGCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQLLSKP*CSLLLA
Trigger: GGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAGTAG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAGGAAGCCACAAACCATaGAGATTTTGTAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQGSHKP*RFCKER
Trigger: CCTCTCCTTACAAAATCTGCATGGTTTGTGGCTTCC...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGGAAGCCACAAACCATaGAGATTTTGTAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTGSHKP*RFCKER
Trigger: CCTCTCCTTACAAAATCTGCATGGTTTGTGGCTTCC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGAGAGGCCTGCACAACTaGCCTTATTTGTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTRGLHN*PYLFLQ
Trigger: TTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCT...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGTGAGAGGACAGCGCTaGCCAGAACATTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLVRGQR*PEHSEK
Trigger: TTTTTCAGAATGTTCTGGGCAGCGCTGTCCTCTCAC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGGATACACACAGTCCTaGGGTAACAGTGATGTGATG +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLGYTQS*GNSDVM
Trigger: CATCACATCACTGTTACCGCAGGACTGTGTGTATCC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR GCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGGATACACACAGTCCTaGGGTAACAGTGATGTGATG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLGYTQS*GNSDVM
Trigger: CATCACATCACTGTTACCGCAGGACTGTGTGTATCC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTAAAGTTGCGATAAAATaGTGCCAGCTTCCGAATGGC +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLKVAIK*CQLPNG
Trigger: GCCATTCGGAAGCTGGCAGCATTTTATCGCAACTTT...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCCGTTGGGCAATTTCTaGAGTTGGAATAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAPLGNF*SWNKAT
Trigger: AGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCCGTTGGGCAATTTCTaGAGTTGGAATAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCPLGNF*SWNKAT
Trigger: AGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTATTGTGTAGCTCGGAATaGAACAACAGCGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLLCSSE*NNSGPF
Trigger: AAAGGGACCGCTGTTGTTCCATTCCGAGCTACACAA...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAACTCGTTGATCGTTGCTaGACTACTCTCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRELVDRC*TTLQAL
Trigger: CAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAG...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGCTTCTCCTTGCTACTaGGTAACTTGGGATCCGCGT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFASPCY*VTWDPR
Trigger: ACGCGGATCCCAAGTTACCCAGTAGCAAGGAGAAGC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTAAGCTGCTTTGCAGGTaGACTGCCTGTAACATCTTT +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLKLLCR*TACNIF
Trigger: AAAGATGTTACAGGCAGTCCACCTGCAAAGCAGCTT...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAACTTCAAGGTTATaGGTGGTACTGCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNLTSRL*VVLPSG
Trigger: TCCGGATGGCAGTACCACCCATAACCTTGAAGTTAG...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGTGACAATCCACACTTaGCCTGTATCTGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSVTIHT*PVSAVS
Trigger: GCTGACTGCAGATACAGGCCAAGTGTGGATTGTCAC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAACCGGGAAAGCAGACTTaGGCTTGGGTTTACAGAAAC +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREPGKQT*AWVYRN
Trigger: GTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGG...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTCCCCACATTCTGCTGTaGTCTGTGGGACTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFPHILL*SVGLQV
Trigger: AACCTGAAGTCCCACAGACCACAGCAGAATGTGGGG...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTCTGCTGCAGTATTGCTaGCACTCCGATTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLLLQYC*HSDYRN
Trigger: ATTTCTGTAATCGGAGTGCCAGCAATACTGCAGCAG...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGGACTTCAGTCTTTTTaGAAGGGGCTCACCAAATTC +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTGLQSF*KGLTKF
Trigger: GAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTATTTTATCAAGCGGACTaGGATACTCTGCTTCAACCC +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLFYQAD*DTLLQP
Trigger: GGGTTGAAGCAGAGTATCTCAGTCCGCTTGATAAAA...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTTTTACCATCGTTCTTaGCTTCAGCAGCAACATCGG +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAFYHRS*LQQQHR
Trigger: CCGATGTTGCTGCTGAAGTCAAGAACGATGGTAAAA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAGCGACTCTAAATGTCTaGCCACATACCTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREATLNV*PHTSQL
Trigger: TAGCTGTGAGGTATGTGGGCAGACATTTAGAGTCGC...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCTTCTGGCCCCCGATTTaGCATTATGTGTCCGCATGT +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSFWPPI*HYVSAC
Trigger: ACATGCGGACACATAATGGCAAATCGGGGGCCAGAA...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTTTTTGGTGTGCACCTTaGGGTGCTCAATTAGACTTT +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLFWCAP*GAQLDF
Trigger: AAAGTCTAATTGAGCACCGCAAGGTGCACACCAAAA...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGAGTGGGCTTCTCCTTaGTACTGGGTAACTTGGGAT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFEWASP*YWVTWD
Trigger: ATCCCAAGTTACCCAGTAGCAAGGAGAAGCCCACTC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGTGAGAGGACAGCGCTaGCCAGAACATTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSVRGQR*PEHSEK
Trigger: TTTTTCAGAATGTTCTGGGCAGCGCTGTCCTCTCAC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTTTTTGTCTTATCCGGTaGAGGGGAAACACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLFCLIR*RGNTGF
Trigger: AAAACCAGTGTTTCCCCTGCACCGGATAAGACAAAA...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGATTCTGCTGCAGTATTaGTGGCACTCCGATTACAGA +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLILLQY*WHSDYR
Trigger: TCTGTAATCGGAGTGCCAGCAATACTGCAGCAGAAT...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAATTCTGCTGCAGTATTaGTGGCACTCCGATTACAGA +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLILLQY*WHSDYR
Trigger: TCTGTAATCGGAGTGCCAGCAATACTGCAGCAGAAT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACAAAGTTGCGATAAAATaGTGCCAGCTTCCGAATGGC +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNKVAIK*CQLPNG
Trigger: GCCATTCGGAAGCTGGCAGCATTTTATCGCAACTTT...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGAATGTGTGAAGGTCTaGCTGCAGAACATGCAATCC +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSECVKV*LQNMQS
Trigger: GGATTGCATGTTCTGCAGCCAGACCTTCACACATTC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATCATTTTTATCCAGATaGATTCCTTCGGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQSFLSR*IPSGSP
Trigger: TGGGCTTCCCGAAGGAATCCATCTGGATAAAAATGA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACAAGCTGCTTTGCAGGTaGACTGCCTGTAACATCTTT +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNKLLCR*TACNIF
Trigger: AAAGATGTTACAGGCAGTCCACCTGCAAAGCAGCTT...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAACTAACTTCAAGGTTATaGGTGGTACTGCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRELTSRL*VVLPSG
Trigger: TCCGGATGGCAGTACCACCCATAACCTTGAAGTTAG...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGTGACAATCCACACTTaGCCTGTATCTGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSVTIHT*PVSAVS
Trigger: GCTGACTGCAGATACAGGCCAAGTGTGGATTGTCAC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCCCGGGAAAGCAGACTTaGGCTTGGGTTTACAGAAAC +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSPGKQT*AWVYRN
Trigger: GTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGG...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATGTTACACCCGTAAGTaGAAGAATCTTTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQCYTRK*KNLCVF
Trigger: GAACACACAAAGATTCTTTCACTTACGGGTGTAACA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATTATGTGTCCGCATGTaGTTTTTAAGAAACCAAGGC +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQLCVRM*FLRNQG
Trigger: GCCTTGGTTTCTTAAAAATCACATGCGGACACATAA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGATTTTGGTCTCAAGTTaGACAACTGCAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLILVSS*TTAGSP
Trigger: AGGACTTCCTGCAGTTGTTCAACTTGAGACCAAAAT...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAATTCCCCGTTTCAGGGTaGGATTTTGGTCTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQFPVSG*DFGLKL
Trigger: CAACTTGAGACCAAAATCTCACCCTGAAACGGGGAA...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGCATCTTCAGTGTCCTaGTTTTTACCATCGTTCTTG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLASSVS*FLPSFL
Trigger: CAAGAACGATGGTAAAAATCAGGACACTGAAGATGC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGCATCTTCAGTGTCCTaGTTTTTACCATCGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLASSVS*FLPSFL
Trigger: CAAGAACGATGGTAAAAATCAGGACACTGAAGATGC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAATGAGGTTATTTGCCTaGGTTTCAACTGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLMRLFA*VSTADL
Trigger: GAGATCAGCAGTTGAAACTCAGGCAAATAACCTCAT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCCTTGGTTCTACAGATaGGGTTATTTGCCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAPWFYR*GYLPEF
Trigger: AAACTCAGGCAAATAACCTCATCTGTAGAACCAAGG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTCTGGATAAAATGTCTTaGAGGTACAAAATGGACAGG +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLLDKMS*RYKMDR
Trigger: CCTGTCCATTTTGTACCTTCAAGACATTTTATCCAG...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTGTGTGCACCTTGCGGTaGTCAATTAGACTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCVCTLR*SIRLSL
Trigger: TAAAGAAAGTCTAATTGAGCACCGCAAGGTGCACAC...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTTTTGGTGTGCACCTTaGGGTGCTCAATTAGACTTT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAFWCAP*GAQLDF
Trigger: AAAGTCTAATTGAGCACCGCAAGGTGCACACCAAAA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGAGATGTCTTCTGGGCTaGAGCATATTCACAAAATTC +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTRCLLG*SIFTKF
Trigger: GAATTTTGTGAATATGCTGCAGCCCAGAAGACATCT...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTTTTACTCAAAGAAATTaGCGGGCAATTGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLFTQRN*RAIVKS
Trigger: GCTCTTCACAATTGCCCGGCAATTTCTTTGAGTAAA...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACTCAGGATTGTATTTATaGTCCAGTCTCTGGTGCATC +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNSGLYL*SSLWCI
Trigger: GATGCACCAGAGACTGGAGCATAAATACAATCCTGA...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGCTGACCTCGATATCTaGAGCACATATCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSADLDI*STYHRG
Trigger: CCCTCTATGATATGTGCTGCAGATATCGAGGTCAGC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTGCTCTACAGAGAAAATaGTTGTCTGTAGACACACTC +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAALQRK*LSVDTL
Trigger: GAGTGTGTCTACAGACAAGCATTTTCTCTGTAGAGC...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGGCAATTTCTGGAGTTaGAATAAGGCCACTTGTAAG +
Preference number: 4 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLGNFWS*NKATCK
Trigger: CTTACAAGTGGCCTTATTCCAACTCCAGAAATTGCC...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACATCTCAAAGTTCCGTTaGGCAATTTCTGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNISKFR*AISGVG
Trigger: TCCAACTCCAGAAATTGCCCAACGGAACTTTGAGAT...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAGAATGTGTGAAGGTCTaGCTGCAGAACATGCAATCC +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQECVKV*LQNMQS
Trigger: GGATTGCATGTTCTGCAGCCAGACCTTCACACATTC...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATTGTGTGTTCTCATGTaGATCTCAACATCAAAAGCG +
Preference number: 4 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQLCVLM*ISTSKA
Trigger: CGCTTTTGATGTTGAGATCCACATGAGAACACACAA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTTTCAGGGTGAGATTTTaGTCTCAAGTTGAACAACTG +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLFRVRF*SQVEQL
Trigger: CAGTTGTTCAACTTGAGACCAAAATCTCACCCTGAA...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTCATTTTTATCCAGATaGATTCCTTCGGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLSFLSR*IPSGSP
Trigger: TGGGCTTCCCGAAGGAATCCATCTGGATAAAAATGA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCTGAGAAGGAGCTACTaGAAGAGGTTTCAATTTTGT +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTLRRSY*KRFQFC
Trigger: ACAAAATTGAAACCTCTTCCAGTAGCTCCTTCTCAG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCAACAGTCAGCACATTTaGAGAATCGACCTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSNSQHI*RIDLAG
Trigger: TCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTT...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACTGTTACACCCGTAAGTaGAAGAATCTTTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNCYTRK*KNLCVF
Trigger: GAACACACAAAGATTCTTTCACTTACGGGTGTAACA...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTCCTTGGTTCTACAGATaGGGTTATTTGCCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSPWFYR*GYLPEF
Trigger: AAACTCAGGCAAATAACCTCATCTGTAGAACCAAGG...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCTGGATAAAATGTCTTaGAGGTACAAAATGGACAGG +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIALDKMS*RYKMDR
Trigger: CCTGTCCATTTTGTACCTTCAAGACATTTTATCCAG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCTGTTAGATAAGTGTTaGTATGACACAGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTLLDKC*YDTGLF
Trigger: AAAAAGGCCTGTGTCATATCAACACTTATCTAACAG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCAGAGGCCTGCACAACTaGCCTTATTTGTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSRGLHN*PYLFLQ
Trigger: TTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCT...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAATGCTCCAGTCTCTGGTaGATCATTAAAACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRECSSLW*IIKTSG
Trigger: TCCAGAAGTTTTAATGATGCACCAGAGACTGGAGCA...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTATACAACGTGTGGCTaGTCTACAGAGAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAYTTCG*STEKML
Trigger: AAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTATACAACGTGTGGCTaGTCTACAGAGAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLYTTCG*STEKML
Trigger: AAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTTGTGTGTTCTCATGTaGATCTCAACATCAAAAGCG +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIALCVLM*ISTSKA
Trigger: CGCTTTTGATGTTGAGATCCACATGAGAACACACAA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTTTATGCTCCAGTCTCTaGTGCATCATTAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLLCSSL*CIIKTS
Trigger: AGAAGTTTTAATGATGCACCAGAGACTGGAGCATAA...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCTGAGAAGGAGCTACTaGAAGAGGTTTCAATTTTGT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIALRRSY*KRFQFC
Trigger: ACAAAATTGAAACCTCTTCCAGTAGCTCCTTCTCAG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTCTGCTGCAGTATTGCTaGCACTCCGATTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFLLQYC*HSDYRN
Trigger: ATTTCTGTAATCGGAGTGCCAGCAATACTGCAGCAG...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAGGACTTCAGTCTTTTTaGAAGGGGCTCACCAAATTC +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQGLQSF*KGLTKF
Trigger: GAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCC...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCTCAATCCCAGCAACCTaGAGACAAGGGATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSSIPAT*RQGISK
Trigger: TTTGGAAATCCCTTGTCTCCAGGTTGCTGGGATTGA...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371471.7
CDS-3UTR TCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTTTTATTAAGGTCTTCTaGATGTGTGAAGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSFIKVF*MCEGLA
Trigger: AGCCAGACCTTCACACATTCAGAAGACCTTAATAAA...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTATTTTGGTCTCAAGTTaGACAACTGCAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFILVSS*TTAGSP
Trigger: AGGACTTCCTGCAGTTGTTCAACTTGAGACCAAAAT...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTTTTTATGGAAATCCTaGGTATCTTTGTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAFLWKS*VSLCAG
Trigger: ACCAGCACACAAAGATACTCAGGATTTCCATAAAAA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTTTTATGGAAATCCTaGGTATCTTTGTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLFLWKS*VSLCAG
Trigger: ACCAGCACACAAAGATACTCAGGATTTCCATAAAAA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTAGGGTAGGCCGGTGTTaGATTAAGACATGTTTATTA +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSRVGRC*IKTCLL
Trigger: TAATAAACATGTCTTAATGCAACACCGGCCTACCCT...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTTTCAAATTTTTGGTTTaGGCACTGTCAGCGGTTAAT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCFKFLV*ALSAVN
Trigger: ATTAACCGCTGACAGTGCGCAAACCAAAAATTTGAA...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAATTTTGTCTTATCCGGTaGAGGGGAAACACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQFCLIR*RGNTGF
Trigger: AAAACCAGTGTTTCCCCTGCACCGGATAAGACAAAA...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGCTCTACAGAGAAAATaGTTGTCTGTAGACACACTC +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFALQRK*LSVDTL
Trigger: GAGTGTGTCTACAGACAAGCATTTTCTCTGTAGAGC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGGCAATTTCTGGAGTTaGAATAAGGCCACTTGTAAG +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFGNFWS*NKATCK
Trigger: CTTACAAGTGGCCTTATTCCAACTCCAGAAATTGCC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTTTATGCTCCAGTCTCTaGTGCATCATTAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCLCSSL*CIIKTS
Trigger: AGAAGTTTTAATGATGCACCAGAGACTGGAGCATAA...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTTGTTTATACAACGTGTaGCTGCTCTACAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCCLYNV*LLYREN
Trigger: ATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACA...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCAATGAGTGTTTCAATTaGGCAAGAAGTCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSNECFN*ARSQSQ
Trigger: CTGGGATTGACTTCTTGCTCAATTGAAACACTCATT...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371471.7
CDS-3UTR GCA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAATACAGGGTTCCCAATaGCTCGATTCAAATATGAAT +
Preference number: 4 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREIQGSQ*LDSNMN
Trigger: ATTCATATTTGAATCGAGGCATTGGGAACCCTGTAT...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTATACAGGGTTCCCAATaGCTCGATTCAAATATGAAT +
Preference number: 4 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSIQGSQ*LDSNMN
Trigger: ATTCATATTTGAATCGAGGCATTGGGAACCCTGTAT...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR GCA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAAGATGTCTTCTGGGCTaGAGCATATTCACAAAATTC +
Preference number: 4 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQRCLLG*SIFTKF
Trigger: GAATTTTGTGAATATGCTGCAGCCCAGAAGACATCT...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTTTCAGGGTGAGATTTTaGTCTCAAGTTGAACAACTG +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFFRVRF*SQVEQL
Trigger: CAGTTGTTCAACTTGAGACCAAAATCTCACCCTGAA...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTATCTTTTCAAATTTTTaGTTTGCGCACTGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFIFSNF*FAHCQR
Trigger: CCGCTGACAGTGCGCAAACCAAAAATTTGAAAAGAT...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTGGACAGGTGATACTTaGAATCAAACTTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLWTGDT*NQTFTQ
Trigger: TTGAGTAAAAGTTTGATTCCAAGTATCACCTGTCCA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTCTGTTAGATAAGTGTTaGTATGACACAGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFLLDKC*YDTGLF
Trigger: AAAAAGGCCTGTGTCATATCAACACTTATCTAACAG...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR TCA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCTTTGTCTCCATTGAATaGGTGTTTCAATTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSFVSIE*VFQLSK
Trigger: CTTGCTCAATTGAAACACTCATTCAATGGAGACAAA...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTTGTTTATACAACGTGTaGCTGCTCTACAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFCLYNV*LLYREN
Trigger: ATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACA...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CCA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTTGGACAGGTGATACTTaGAATCAAACTTTTACTCAA +
Preference number: 4 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFWTGDT*NQTFTQ
Trigger: TTGAGTAAAAGTTTGATTCCAAGTATCACCTGTCCA...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp GGTCAGGAGAACACGTCCCCGGCTGCCTCCCGTCCACAGACATGGTaGGCGACTCCGCGCCGGCCCTCCGGTCCTTCTTGTGGACCCTGG +
Preference number: 5 (lower is better)
Translates to: GQENTSPAASRPQTW*ATPRRPSGPSCGPW
Trigger: CCAGGGTCCACAAGAAGGACCGGAGGGCCGGCGCGGAGTCGCCCACCATGTCTGTGGACGGGAGGCAGCCGGGGACGTGTTCTCCTGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp CGAGGTCAGGAGAACACGTCCCCGGCTGCCTCCCGTCCACAGACATaGTGGGCGACTCCGCGCCGGCCCTCCGGTCCTTCTTGTGGACCC +
Preference number: 5 (lower is better)
Translates to: RGQENTSPAASRPQT*WATPRRPSGPSCGP
Trigger: GGGTCCACAAGAAGGACCGGAGGGCCGGCGCGGAGTCGCCCACCATGTCTGTGGACGGGAGGCAGCCGGGGACGTGTTCTCCTGACCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp CGCACTCGGAGCAGTGAGTGGGCTTCTCCTTGCTACTGGGTAACTTaGGATCCGCGTCCACGGAGGGCGCTTCGCCGTGGGAGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: RTRSSEWASPCYWVT*DPRPRRALRRGSVC
Trigger: GCAAACACTCCCACGGCGAAGCGCCCTCCGTGGACGCGGATCCCAAGTTACCCAGTAGCAAGGAGAAGCCCACTCACTGCTCCGAGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp CTGGCCCAGGAGGGCTCTGCTTCCCCTTCGCAGATGGCAGGGATTTaGACTGCGCCGGGAAAGCAGACTTGGGCTTGGGTTTACAGAAAC +
Preference number: 5 (lower is better)
Translates to: LAQEGSASPSQMAGI*TAPGKQTWAWVYRN
Trigger: GTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 90 bp GTGCCCACGGGCTGTCGTTCTTGGCGGGGTAGTCGATGGAACCATTaGTGTTACTGCTGCCGAGGGTGGGCTGAGAAGGAGCTACTGGAA +
Preference number: 5 (lower is better)
Translates to: VPTGCRSWRGSRWNH*CYCCRGWAEKELLE
Trigger: TTCCAGTAGCTCCTTCTCAGCCCACCCTCGGCAGCAGTAACATCAATGGTTCCATCGACTACCCCGCCAAGAACGACAGCCCGTGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp TCGACCTCGCTGGAGCTCAGGAACCTTGGTTTGGGAGGCAGCGCCTaGGACGGATACACACAGTCCTGCGGTAACAGTGATGTGATGCCT +
Preference number: 5 (lower is better)
Translates to: STSLELRNLGLGGSA*DGYTQSCGNSDVMP
Trigger: AGGCATCACATCACTGTTACCGCAGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 90 bp CTACTGGGTAACTTGGGATCCGCGTCCACGGAGGGCGCTTCGCCGTaGGAGTGTTTGCACTTCTCTTTCTCTTGCGAGAGGCCTGCACAA +
Preference number: 5 (lower is better)
Translates to: LLGNLGSASTEGASP*ECLHFSFSCERPAQ
Trigger: TTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCCCACGGCGAAGCGCCCTCCGTGGACGCGGATCCCAAGTTACCCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 90 bp AAGGAGAGGAGATGCTCTCGGCCGCGTGCACCTGGACGACCTCGTTaGTCGTTGCTGGACTACTCTCCAAGCCTTGCTGCAGTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KERRCSRPRAPGRPR*SLLDYSPSLAAVCF
Trigger: GAAGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGTGCACGCGGCCGAGAGCATCTCCTCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp CCAGGAGGGCTCTGCTTCCCCTTCGCAGATGGCAGGGATTTGGACTaGGCCGGGAAAGCAGACTTGGGCTTGGGTTTACAGAAACTAGAG +
Preference number: 5 (lower is better)
Translates to: PGGLCFPFADGRDLD*AGKADLGLGLQKLE
Trigger: CTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp GCACATTTGGAGAATCGACCTCGCTGGAGCTCAGGAACCTTGGTTTaGGAGGCAGCGCCTGCGACGGATACACACAGTCCTGCGGTAACA +
Preference number: 5 (lower is better)
Translates to: AHLENRPRWSSGTLV*EAAPATDTHSPAVT
Trigger: TGTTACCGCAGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CAA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTCCTGGTGGCGGCCCCTaGGACCCCCACATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRLPAGSASSSLFKINVSPGGGP*DPHILL
Trigger: CAGCAGAATGTGGGGGTCCAAGGGGCCGCCACCAGG...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp AGTGTTCCTGGAGCATCTTCTCCAAAGTGGAGGTCGAGCCAGGCCTaGAGAATGGGCGTGTCCCGAGGGTTAAATGCCCTCATCACCATG +
Preference number: 5 (lower is better)
Translates to: SVPGASSPKWRSSQA*RMGVSRGLNALITM
Trigger: CATGGTGATGAGGGCATTTAACCCTCGGGACACGCCCATTCTGCAGGCCTGGCTCGACCTCCACTTTGGAGAAGATGCTCCAGGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431687.5
CDS CCA 90 bp CATAGGGCTTCTGAACAGTCAGCACATTTGGAGAATCGACCTCGCTaGAGCTCAGGAACCTTGGTTTGGGAGGCAGCGCCTGCGACGGAT +
Preference number: 5 (lower is better)
Translates to: HRASEQSAHLENRPR*SSGTLVWEAAPATD
Trigger: ATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTCAGAAGCCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 90 bp AAGTGGCCCGGAGCCACCATAGGGCTTCTGAACAGTCAGCACATTTaGAGAATCGACCTCGCTGGAGCTCAGGAACCTTGGTTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: KWPGATIGLLNSQHI*RIDLAGAQEPWFGR
Trigger: CCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTCAGAAGCCCTATGGTGGCTCCGGGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 90 bp CGTCGAGCTGGATGCTGGACTACCAGCAGGCACACAAGTGTAAAGTaGCCCGGAGCCACCATAGGGCTTCTGAACAGTCAGCACATTTGG +
Preference number: 5 (lower is better)
Translates to: RRAGCWTTSRHTSVK*PGATIGLLNSQHIW
Trigger: CCAAATGTGCTGACTGTTCAGAAGCCCTATGGTGGCTCCGGGCCACTTTACACTTGTGTGCCTGCTGGTAGTCCAGCATCCAGCTCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 90 bp GCAATCCTCATAGAAGGTCGGGGACGACCTGCCCTTCAGTGTTCCTaGAGCATCTTCTCCAAAGTGGAGGTCGAGCCAGGCCTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: AILIEGRGRPALQCS*SIFSKVEVEPGLQN
Trigger: ATTCTGCAGGCCTGGCTCGACCTCCACTTTGGAGAAGATGCTCCAGGAACACTGAAGGGCAGGTCGTCCCCGACCTTCTATGAGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431687.5
CDS CCA 90 bp GCAATCCTCATAGAAGGTCGGGGACGACCTGCCCTTCAGTGTTCCTaGAGCATCTTCTCCAAAGTGGAGGTCGAGCCAGGCCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: AILIEGRGRPALQCS*SIFSKVEVEPGLFL
Trigger: AAGGAACAGGCCTGGCTCGACCTCCACTTTGGAGAAGATGCTCCAGGAACACTGAAGGGCAGGTCGTCCCCGACCTTCTATGAGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540425.1
CDS GCA 90 bp ACCTGGACGACCTCGTTGATCGTTGCTGGACTACTCTCCAAGCCTTaGTGCAGTTTGCTTCTGGCCCCCGATTTGCCATTATGTGTCCGC +
Preference number: 5 (lower is better)
Translates to: TWTTSLIVAGLLSKP*CSLLLAPDLPLCVR
Trigger: GCGGACACATAATGGCAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp CAAACCCTTGAGCTGGGCAATCCTCATAGAAGGTCGGGGACGACCTaGCCTTCAGTGTTCCTGGAGCATCTTCTCCAAAGTGGAGGTCGA +
Preference number: 5 (lower is better)
Translates to: QTLELGNPHRRSGTT*PSVFLEHLLQSGGR
Trigger: TCGACCTCCACTTTGGAGAAGATGCTCCAGGAACACTGAAGGGCAGGTCGTCCCCGACCTTCTATGAGGATTGCCCAGCTCAAGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431687.5
CDS CCA 90 bp GGGCTGGTCAACGTCAAGGGCAACCACGCTGGACTTCAGTCTTTTTaGAAGGGGCTCACCAAATTCTGCTGCAGTATTGCTGGCACTCCG +
Preference number: 5 (lower is better)
Translates to: GLVNVKGNHAGLQSF*KGLTKFCCSIAGTP
Trigger: CGGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCCAGCGTGGTTGCCCTTGACGTTGACCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp TGGACGACCTCGTTGATCGTTGCTGGACTACTCTCCAAGCCTTGCTaGAGTTTGCTTCTGGCCCCCGATTTGCCATTATGTGTCCGCATG +
Preference number: 5 (lower is better)
Translates to: WTTSLIVAGLLSKPC*SLLLAPDLPLCVRM
Trigger: CATGCGGACACATAATGGCAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp AGTATTGCTGGCACTCCGATTACAGAAATAGTCTCTTCCCGGAGGTaGCCACGGGCTGTCGTTCTTGGCGGGGTAGTCGATGGAACCATT +
Preference number: 5 (lower is better)
Translates to: SIAGTPITEIVSSRR*PRAVVLGGVVDGTI
Trigger: AATGGTTCCATCGACTACCCCGCCAAGAACGACAGCCCGTGGGCACCTCCGGGAAGAGACTATTTCTGTAATCGGAGTGCCAGCAATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp AACCTTGGTTTGGGAGGCAGCGCCTGCGACGGATACACACAGTCCTaGGGTAACAGTGATGTGATGCCTCTGACCATATGGTACTTGGGA +
Preference number: 5 (lower is better)
Translates to: NLGLGGSACDGYTQS*GNSDVMPLTIWYLG
Trigger: TCCCAAGTACCATATGGTCAGAGGCATCACATCACTGTTACCGCAGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 90 bp GCTGCGGTCTCCGTTTGCTTCTCTTTGGGGCTAACTTCAAGGTTATaGGTGGTACTGCCATCCGGAGGAGGAGTAACATCCGCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: AAVSVCFSLGLTSRL*VVLPSGGGVTSALV
Trigger: AACCAAGGCGGATGTTACTCCTCCTCCGGATGGCAGTACCACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTTGGAGCTCAGGAACCTaGGTTTGGGAGGCAGCGCCT +
Preference number: 5 (lower is better)
Translates to: SRLPAGSASSSLFKINVSWSSGT*VWEAAP
Trigger: AGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCA...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp ACAATACTTGAGCTGGGCAATCCTCATAGAAGGTCGGGGACGACCTaGCCTTCAGTGTTCCTGGAGCATCTTCTCCAAAGTGGAGGTCGA +
Preference number: 5 (lower is better)
Translates to: TILELGNPHRRSGTT*PSVFLEHLLQSGGR
Trigger: TCGACCTCCACTTTGGAGAAGATGCTCCAGGAACACTGAAGGGCAGGTCGTCCCCGACCTTCTATGAGGATTGCCCAGCTCAAGTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540425.1
CDS CCA 90 bp AGGGATGCATCTGACAGGCTTCTTCCCCGTTTCAGGGTGAGATTTTaGTCTCAAGTTGAACAACTGCAGGAAGTCCTCCCTCGAGGACGG +
Preference number: 5 (lower is better)
Translates to: RDASDRLLPRFRVRF*SQVEQLQEVLPRGR
Trigger: CCGTCCTCGAGGGAGGACTTCCTGCAGTTGTTCAACTTGAGACCAAAATCTCACCCTGAAACGGGGAAGAAGCCTGTCAGATGCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGTCGGTGCTCCCTTCTaGCCCCGATTCCTTCACTTC +
Preference number: 5 (lower is better)
Translates to: SRLPAGSASSSLFKINVSVGAPF*PRFLHF
Trigger: GAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGAC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp CAATCCACACTTGGCCTGTATCTGCAGTCAGCTGCGGTCTCCGTTTaGTTCTCTTTGGGGCTAACTTCAAGGTTATGGGTGGTACTGCCA +
Preference number: 5 (lower is better)
Translates to: QSTLGLYLQSAAVSV*FSLGLTSRLWVVLP
Trigger: TGGCAGTACCACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTGTGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp TTTACAGAAACTAGAGAGGGGAGGCACATCTTTTCCCAGCAACGCTaGCGGGCATCCGGTACGTCGACTTCTAAGCAAGGACTTGTTTCG +
Preference number: 5 (lower is better)
Translates to: FTETREGRHIFSQQR*RASGTSTSKQGLVS
Trigger: CGAAACAAGTCCTTGCTTAGAAGTCGACGTACCGGATGCCCGCCAGCGTTGCTGGGAAAAGATGTGCCTCCCCTCTCTAGTTTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 90 bp TTTTTCTTGTGTAGCTCGGAATGGAACAACAGCGGTCCCTTTCATTaGCAAGGCATCCTCCATCTCCATCGGACTGCCAAGAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: FFLCSSEWNNSGPFH*QGILHLHRTAKRAA
Trigger: GGCAGCTCTCTTGGCAGTCCGATGGAGATGGAGGATGCCTTGTCAATGAAAGGGACCGCTGTTGTTCCATTCCGAGCTACACAAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS GCA 90 bp AGGTTCTGTTCGCACTTGACTTTTATCAAGCGGACTGAGATACTCTaGTTCAACCCGAAGAACTGCTGGTTCACAGAGGGTAGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RFCSHLTFIKRTEIL*FNPKNCWFTEGRPV
Trigger: CACCGGCCTACCCTCTGTGAACCAGCAGTTCTTCGGGTTGAAGCAGAGTATCTCAGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp AGCTCCTTCTCGGAACTCGAATCGTCGTTGTCGGTGCTCCCTTCTTaGCCCGATTCCTTCACTTCTTGGCAAATGGCAACTTTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SSFSELESSLSVLPS*PDSFTSWQMATFPL
Trigger: CAAAGGAAAAGTTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGAGAAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp TTGTTTCTCCAAGCTCCTTCTCGGAACTCGAATCGTCGTTGTCGGTaGTCCCTTCTTGCCCCGATTCCTTCACTTCTTGGCAAATGGCAA +
Preference number: 5 (lower is better)
Translates to: LFLQAPSRNSNRRCR*SLLAPIPSLLGKWQ
Trigger: TTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGAGAAGGAGCTTGGAGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp TTCGCCGTGGGAGTGTTTGCACTTCTCTTTCTCTTGCGAGAGGCCTaGACAACTGCCCTTATTTGTTTCTCCAAGCTCCTTCTCGGAACT +
Preference number: 5 (lower is better)
Translates to: FAVGVFALLFLLREA*TTALICFSKLLLGT
Trigger: AGTTCCGAGAAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCCCACGGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp TCAGTCTTTTTGGAAGGGGCTCACCAAATTCTGCTGCAGTATTGCTaGCACTCCGATTACAGAAATAGTCTCTTCCCGGAGGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: SVFLEGAHQILLQYC*HSDYRNSLFPEVPT
Trigger: CGTGGGCACCTCCGGGAAGAGACTATTTCTGTAATCGGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAAAAAGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTGAACAGTCAGCACATTaGGAGAATCGACCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: SRLPAGSASSSLFKINVSEQSAH*ENRPRW
Trigger: CCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTC...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp TCATTGACAAGGCATCCTCCATCTCCATCGGACTGCCAAGAGAGCTaGCAATCACTTCTGGCCCATCCATGTACATTAAGAGGGATTGAG +
Preference number: 5 (lower is better)
Translates to: SLTRHPPSPSDCQES*QSLLAHPCTLRGIE
Trigger: CTCAATCCCTCTTAATGTACATGGATGGGCCAGAAGTGATTGGCAGCTCTCTTGGCAGTCCGATGGAGATGGAGGATGCCTTGTCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS GCA 90 bp GGGAGTGTTTGCACTTCTCTTTCTCTTGCGAGAGGCCTGCACAACTaGCCTTATTTGTTTCTCCAAGCTCCTTCTCGGAACTCGAATCGT +
Preference number: 5 (lower is better)
Translates to: GSVCTSLSLARGLHN*PYLFLQAPSRNSNR
Trigger: ACGATTCGAGTTCCGAGAAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp ACTTCAGTCTTTTTGGAAGGGGCTCACCAAATTCTGCTGCAGTATTaGTGGCACTCCGATTACAGAAATAGTCTCTTCCCGGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TSVFLEGAHQILLQY*WHSDYRNSLFPEVP
Trigger: GGGCACCTCCGGGAAGAGACTATTTCTGTAATCGGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGCCCTCCGGTCCTTCTaGTGGACCCTGGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTALRSF*WTLECK
Trigger: CTTGCACTCCAGGGTCCACAAGAAGGACCGGAGGGC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCTCAGGAACCTTGGTTaGGGAGGCAGCGCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTLRNLG*GGSACD
Trigger: GTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 90 bp TTTCCTTGGGAGGTTCTGTTCGCACTTGACTTTTATCAAGCGGACTaGGATACTCTGCTTCAACCCGAAGAACTGCTGGTTCACAGAGGG +
Preference number: 5 (lower is better)
Translates to: FPWEVLFALDFYQAD*DTLLQPEELLVHRG
Trigger: CCCTCTGTGAACCAGCAGTTCTTCGGGTTGAAGCAGAGTATCTCAGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACCTCCCAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp AGGTTTTTCGTGACAATCCACACTTGGCCTGTATCTGCAGTCAGCTaGGGTCTCCGTTTGCTTCTCTTTGGGGCTAACTTCAAGGTTATG +
Preference number: 5 (lower is better)
Translates to: RFFVTIHTWPVSAVS*GLRLLLFGANFKVM
Trigger: CATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTGTGGATTGTCACGAAAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp ACCATTGATGTTACTGCTGCCGAGGGTGGGCTGAGAAGGAGCTACTaGAAGAGGTTTCAATTTTGTCTCGGGTCTTTTTGTCTTATCCGG +
Preference number: 5 (lower is better)
Translates to: TIDVTAAEGGLRRSY*KRFQFCLGSFCLIR
Trigger: CCGGATAAGACAAAAAGACCCGAGACAAAATTGAAACCTCTTCCAGTAGCTCCTTCTCAGCCCACCCTCGGCAGCAGTAACATCAATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTGGACGGCATTCCTCCTaGTGGAGAGTCTGTCTGCGC +
Preference number: 5 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLGRHSS*WRVCLR
Trigger: GCGCAGACAGACTCTCCACAAGGAGGAATGCCGTCC...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACGCCCTCCGGTCCTTCTaGTGGACCCTGGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNALRSF*WTLECK
Trigger: CTTGCACTCCAGGGTCCACAAGAAGGACCGGAGGGC...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACCTGGTGGCGGCCCCTaGGACCCCCACATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQPGGGP*DPHILL
Trigger: CAGCAGAATGTGGGGGTCCAAGGGGCCGCCACCAGG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACATCTCAGATTGCTGTaGCCTGGTGGCGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQHLRLL*PGGGPL
Trigger: CAAGGGGCCGCCACCAGGCAACAGCAATCTGAGATG...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCTCAGGAACCTTGGTTaGGGAGGCAGCGCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIALRNLG*GGSACD
Trigger: GTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CAA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTTGGAGCTCAGGAACCTaGGTTTGGGAGGCAGCGCCT +
Preference number: 5 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLWSSGT*VWEAAP
Trigger: AGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCA...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CAA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTGGACGGCATTCCTCCTaGTGGAGAGTCTGTCTGCGC +
Preference number: 5 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCGRHSS*WRVCLR
Trigger: GCGCAGACAGACTCTCCACAAGGAGGAATGCCGTCC...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCATCTCAGATTGCTGTaGCCTGGTGGCGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNHLRLL*PGGGPL
Trigger: CAAGGGGCCGCCACCAGGCAACAGCAATCTGAGATG...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTTGGAGCTCAGGAACCTaGGTTTGGGAGGCAGCGCCT +
Preference number: 5 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCWSSGT*VWEAAP
Trigger: AGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCA...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS GCA 90 bp GCTTCAACCCGAAGAACTGCTGGTTCACAGAGGGTAGGCCGGTGTTaGATTAAGACATGTTTATTAAGGTCTTCTGAATGTGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: ASTRRTAGSQRVGRC*IKTCLLRSSECVKV
Trigger: GACCTTCACACATTCAGAAGACCTTAATAAACATGTCTTAATGCAACACCGGCCTACCCTCTGTGAACCAGCAGTTCTTCGGGTTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TCTAGACTCCCAGCGGGCTCGGCCAGCAGTTCCTTATTCAAAATCAATGTGTCTTTAAGAGGGATTGAGTaGGCATGTTTCCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: SRLPAGSASSSLFKINVSLRGIE*ACFLSL
Trigger: AAGTGACAGGAAACATGCCAACTCAATCCCTCTTAA...AGACACATTGATTTTGAATAAGGAACTGCTGGCCGAGCCCGCTGGGAGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTTGCTACTGGGTAACTaGGGATCCGCGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIALLLGN*GSASTE
Trigger: CTCCGTGGACGCGGATCCCAAGTTACCCAGTAGCAA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGAGCTGCGGTCTCCGTTaGCTTCTCTTTGGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTSCGLR*LLFGAN
Trigger: GTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCT...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGCAGATGGCAGGGATTaGGACTGCGCCGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSADGRD*DCAGKA
Trigger: TGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTCAGGAACCTTGGTTaGGGAGGCAGCGCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQLRNLG*GGSACD
Trigger: GTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CAA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACAGCGGTCCCTTTCATaGACAAGGCATCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQQRSLS*TRHPPS
Trigger: AGATGGAGGATGCCTTGTCAATGAAAGGGACCGCTG...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACAAGCCTTGCTGCAGTTaGCTTCTGGCCCCCGATTTG +
Preference number: 5 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNKPCCS*LLAPDL
Trigger: CAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCTT...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAACCTGGACGACCTCGTaGATCGTTGCTGGACTACTC +
Preference number: 5 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLTWTTS*IVAGLL
Trigger: GAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGTCGGTGCTCCCTTCTaGCCCCGATTCCTTCACTTC +
Preference number: 5 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSVGAPF*PRFLHF
Trigger: GAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGAC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGAACTCGAATCGTCGTaGTCGGTGCTCCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLELESS*SVLPSC
Trigger: GCAAGAAGGGAGCACCGACAACGACGATTCGAGTTC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAGCACTTCTCTTTCTCTaGCGAGAGGCCTGCACAACT +
Preference number: 5 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQALLFL*REACTT
Trigger: AGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGC...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGCAGATGGCAGGGATTaGGACTGCGCCGGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFADGRD*DCAGKA
Trigger: TGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAAGGAAACATCTCAGATaGCTGTTGCCTGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLRKHLR*LLPGGG
Trigger: GCCGCCACCAGGCAACAGCAATCTGAGATGTTTCCT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAACTTCTGGCCCCCGATTaGCCATTATGTGTCCGCATG +
Preference number: 5 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRELLAPD*PLCVRM
Trigger: CATGCGGACACATAATGGCAAATCGGGGGCCAGAAG...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAACCTGGACGACCTCGTaGATCGTTGCTGGACTACTC +
Preference number: 5 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRETWTTS*IVAGLL
Trigger: GAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGT...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGAACTCGAATCGTCGTaGTCGGTGCTCCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSELESS*SVLPSC
Trigger: GCAAGAAGGGAGCACCGACAACGACGATTCGAGTTC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACGCACTTCTCTTTCTCTaGCGAGAGGCCTGCACAACT +
Preference number: 5 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNALLFL*REACTT
Trigger: AGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGC...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCTTGCTACTGGGTAACTaGGGATCCGCGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSLLLGN*GSASTE
Trigger: CTCCGTGGACGCGGATCCCAAGTTACCCAGTAGCAA...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAGCTGCGGTCTCCGTTaGCTTCTCTTTGGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRESCGLR*LLFGAN
Trigger: GTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCT...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTCGTGACAATCCACACTaGGCCTGTATCTGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIARDNPH*ACICSQ
Trigger: CTGACTGCAGATACAGGCCAAGTGTGGATTGTCACG...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTAGGAAACATCTCAGATaGCTGTTGCCTGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSRKHLR*LLPGGG
Trigger: GCCGCCACCAGGCAACAGCAATCTGAGATGTTTCCT...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTGTCTCGGGTCTTTTaGTCTTATCCGGTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLLSRVF*SYPVQG
Trigger: CCCCTGCACCGGATAAGACAAAAAGACCCGAGACAA...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTATTGTCTCGGGTCTTTTaGTCTTATCCGGTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLLSRVF*SYPVQG
Trigger: CCCCTGCACCGGATAAGACAAAAAGACCCGAGACAA...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTGAACAGTCAGCACATTaGGAGAATCGACCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCEQSAH*ENRPRW
Trigger: CCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTC...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CAA 90 bp TTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGGAACAGTCAGCACATTaGGAGAATCGACCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: LFRDKIEISSPHVCKFQLEQSAH*ENRPRW
Trigger: CCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTC...CAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS TCA 90 bp CCGGTACGTCGACTTCTAAGCAAGGACTTGTTTCGACAGTTTTTATaGACGTCAGGATTGTATTTATGCTCCAGTCTCTGGTGCATCATT +
Preference number: 5 (lower is better)
Translates to: PVRRLLSKDLFRQFL*TSGLYLCSSLWCII
Trigger: AATGATGCACCAGAGACTGGAGCATAAATACAATCCTGACGTTCATAAAAACTGTCGAAACAAGTCCTTGCTTAGAAGTCGACGTACCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp TCACTTTCGATTGCATATAATCTCAAAGTTCCGTTGGGCAATTTCTaGAGTTGGAATAAGGCCACTTGTAAGACTTGTCACTCACCCCTC +
Preference number: 5 (lower is better)
Translates to: SLSIAYNLKVPLGNF*SWNKATCKTCHSPL
Trigger: GAGGGGTGAGTGACAAGTCTTACAAGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGGAACTTTGAGATTATATGCAATCGAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS CCA 90 bp TGCATTAAGACATGTTTATTAAGGTCTTCTGAATGTGTGAAGGTCTaGCTGCAGAACATGCAATCCAAGGGCATATACCCCTCGATTTGG +
Preference number: 5 (lower is better)
Translates to: CIKTCLLRSSECVKV*LQNMQSKGIYPSIW
Trigger: CCAAATCGAGGGGTATATGCCCTTGGATTGCATGTTCTGCAGCCAGACCTTCACACATTCAGAAGACCTTAATAAACATGTCTTAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS-3UTR CAA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTCTTCTGGCCCCCGATTaGCCATTATGTGTCCGCATG +
Preference number: 5 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFLLAPD*PLCVRM
Trigger: CATGCGGACACATAATGGCAAATCGGGGGCCAGAAG...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAAAGCCTTGCTGCAGTTaGCTTCTGGCCCCCGATTTG +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQKPCCS*LLAPDL
Trigger: CAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCTT...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAGGAGTAACATCCGCCTaGGTTCTACAGATGAGGTTA +
Preference number: 5 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQGVTSA*VLQMRL
Trigger: TAACCTCATCTGTAGAACCAAGGCGGATGTTACTCC...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTCGTGACAATCCACACTaGGCCTGTATCTGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSRDNPH*ACICSQ
Trigger: CTGACTGCAGATACAGGCCAAGTGTGGATTGTCACG...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp GGTGTCACTGGTTCTTTCCACAAACAAGGCATACAGGGTTCCCAATaGCTCGATTCAAATATGAATCAGCACAAAGCATTAGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GVTGSFHKQGIQGSQ*LDSNMNQHKALVLF
Trigger: AAAGAGAACTAATGCTTTGTGCTGATTCATATTTGAATCGAGGCATTGGGAACCCTGTATGCCTTGTTTGTGGAAAGAACCAGTGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
ENST00000540425.1
CDS-3UTR CAA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGAATCTCAAAGTTCCGTaGGGCAATTTCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTNLKVP*GNFWSW
Trigger: CCAACTCCAGAAATTGCCCAACGGAACTTTGAGATT...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAAGAAACCAAGGCTCCTaGAATCTTCTTCCGCACATG +
Preference number: 5 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLRNQGS*NLLPHM
Trigger: CATGTGCGGAAGAAGATTCAAGGAGCCTTGGTTTCT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTGATTTTGGTCTCAAGTaGAACAACTGCAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLDFGLK*NNCRKS
Trigger: GGACTTCCTGCAGTTGTTCAACTTGAGACCAAAATC...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAATCCGTTTGCTTCTCTTaGGGGCTAACTTCAAGGTTA +
Preference number: 5 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQSVCFS*GLTSRL
Trigger: TAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGA...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAGCCGGGAAAGCAGACTaGGGCTTGGGTTTACAGAAA +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQAGKAD*GLGLQK
Trigger: TTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGC...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGCCGGGAAAGCAGACTaGGGCTTGGGTTTACAGAAA +
Preference number: 5 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSAGKAD*GLGLQK
Trigger: TTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACAATTCTGCTGCAGTATaGCTGGCACTCCGATTACAG +
Preference number: 5 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNNSAAV*LALRLQ
Trigger: CTGTAATCGGAGTGCCAGCAATACTGCAGCAGAATT...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 90 bp CGGTTAATAGTGCATCTTCAGTGTCCTGATTTTTACCATCGTTCTTaGCTTCAGCAGCAACATCGGTTTGTTTTTCCTTGTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: RLIVHLQCPDFYHRS*LQQQHRFVFPCDVS
Trigger: AGAGACATCACAAGGAAAAACAAACCGATGTTGCTGCTGAAGTCAAGAACGATGGTAAAAATCAGGACACTGAAGATGCACTATTAACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 90 bp CATGTTTCCTGTCACTTTCGATTGCATATAATCTCAAAGTTCCGTTaGGCAATTTCTGGAGTTGGAATAAGGCCACTTGTAAGACTTGTC +
Preference number: 5 (lower is better)
Translates to: HVSCHFRLHIISKFR*AISGVGIRPLVRLV
Trigger: GACAAGTCTTACAAGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGGAACTTTGAGATTATATGCAATCGAAAGTGACAGGAAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS-3UTR CAA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAAATCTCAAAGTTCCGTaGGGCAATTTCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLNLKVP*GNFWSW
Trigger: CCAACTCCAGAAATTGCCCAACGGAACTTTGAGATT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAAGGTTCTGTTCGCACTaGACTTTTATCAAGCGGACT +
Preference number: 5 (lower is better)
Translates to: DKIEISSPHVCKFQLFQLRFCSH*TFIKRT
Trigger: AGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACCT...TAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTTTTTGGTGTGCACCTaGCGGTGCTCAATTAGACTT +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAFLVCT*RCSIRL
Trigger: AAGTCTAATTGAGCACCGCAAGGTGCACACCAAAAA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCGATTCCTTCACTTCTaGGCAAATGGCAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCRFLHF*ANGNFS
Trigger: GGAAAAGTTGCCATTTGCCAAGAAGTGAAGGAATCG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTCACAACTGCCCTTATTaGTTTCTCCAAGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: IEISSPHVCKFQLFQLVCHNCPY*FLQAPS
Trigger: AGAAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTG...ACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp GTATGTCCACAGTTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCACAACTGCCCTTATTaGTTTCTCCAAGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VCPQFTQMPDTLRLPNTNHNCPY*FLQAPS
Trigger: AGAAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTG...GTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAACTGTGGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTCCGTTTGCTTCTCTTaGGGGCTAACTTCAAGGTTA +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIASVCFS*GLTSRL
Trigger: TAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTAAAGCAGACTTGGGCTaGGGTTTACAGAAACTAGAG +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIAKADLG*GLQKLE
Trigger: CTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTT...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGCTACAGAGAAAATGCTaGTCTGTAGACACACTCTCT +
Preference number: 5 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTLQRKC*SVDTLS
Trigger: AGAGAGTGTGTCTACAGACAAGCATTTTCTCTGTAG...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTTTAAGAGGGATTGAGTaGGCATGTTTCCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIALRGIE*ACFLSL
Trigger: AAGTGACAGGAAACATGCCAACTCAATCCCTCTTAA...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAATTGCAATTCTTTTCCTaGGGAGGTTCTGTTCGCACT +
Preference number: 5 (lower is better)
Translates to: NNCTYSLCLYNVWLLYRELQFFS*GGSVRT
Trigger: AGTGCGAACAGAACCTCCCAAGGAAAAGAATTGCAA...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAAGAAACCAAGGCTCCTaGAATCTTCTTCCGCACATG +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQRNQGS*NLLPHM
Trigger: CATGTGCGGAAGAAGATTCAAGGAGCCTTGGTTTCT...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAATGCTTGTCTGATTTTGGTCTCAAGTaGAACAACTGCAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: IQFMFIQRVAALQRKCLSDFGLK*NNCRKS
Trigger: GGACTTCCTGCAGTTGTTCAACTTGAGACCAAAATC...AGACAAGCATTTTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAACTAGTTTGTATTGCTAGCAGCAACATCGGTTaGTTTTTCCTTGTGATGTCT +
Preference number: 5 (lower is better)
Translates to: ISSPHVCKFQLFQLVCIASSNIG*FFLVMS
Trigger: AGACATCACAAGGAAAAACAAACCGATGTTGCTGCT...AGCAATACAAACTAGTTGGAACAGTTGGAACTTACATACATGGGGACTGGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTGTTCCAAAATCTTTTCAAATTTTaGGTTTGCGCACTGTCAGCG +
Preference number: 5 (lower is better)
Translates to: RDKIEISSPHVCKFQLFQNLFKF*VCALSA
Trigger: CGCTGACAGTGCGCAAACCAAAAATTTGAAAAGATT...TTGGAACAGTTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTGGAGTAACATCCGCCTaGGTTCTACAGATGAGGTTA +
Preference number: 5 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFGVTSA*VLQMRL
Trigger: TAACCTCATCTGTAGAACCAAGGCGGATGTTACTCC...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTTTTTACTCAAAGAAATaGCCGGGCAATTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLFYSKK*PGNCEE
Trigger: CTCTTCACAATTGCCCGGCAATTTCTTTGAGTAAAA...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AATAACTGCACATACAGTTTATGTTTATACAACGTGTGGCTGCTCTACAGAGAAAAAGCAGACTTGGGCTaGGGTTTACAGAAACTAGAG +
Preference number: 5 (lower is better)
Translates to: NNCTYSLCLYNVWLLYREKADLG*GLQKLE
Trigger: CTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTT...TTCTCTGTAGAGCAGCCACACGTTGTATAAACATAAACTGTATGTGCAGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAAAATTCTGCTGCAGTATaGCTGGCACTCCGATTACAG +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQNSAAV*LALRLQ
Trigger: CTGTAATCGGAGTGCCAGCAATACTGCAGCAGAATT...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 90 bp TGTGTTCTCATGTGGATCTCAACATCAAAAGCGACTCTAAATGTCTaGCCACATACCTCACAGCTAAATTCATTTTCCTTGCAATTCTTT +
Preference number: 5 (lower is better)
Translates to: CVLMWISTSKATLNV*PHTSQLNSFSLQFF
Trigger: AAAGAATTGCAAGGAAAATGAATTTAGCTGTGAGGTATGTGGGCAGACATTTAGAGTCGCTTTTGATGTTGAGATCCACATGAGAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTAGGTTCTGTTCGCACTaGACTTTTATCAAGCGGACT +
Preference number: 5 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFRFCSH*TFIKRT
Trigger: AGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACCT...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTTTGCAATTCTTTTCCTaGGGAGGTTCTGTTCGCACT +
Preference number: 5 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFLQFFS*GGSVRT
Trigger: AGTGCGAACAGAACCTCCCAAGGAAAAGAATTGCAA...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAATTTTTGGTGTGCACCTaGCGGTGCTCAATTAGACTT +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQFLVCT*RCSIRL
Trigger: AAGTCTAATTGAGCACCGCAAGGTGCACACCAAAAA...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACGATTCCTTCACTTCTaGGCAAATGGCAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQRFLHF*ANGNFS
Trigger: GGAAAAGTTGCCATTTGCCAAGAAGTGAAGGAATCG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCTGGACTTCAGTCTTTTaGGAAGGGGCTCACCAAATT +
Preference number: 5 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSWTSVF*EGAHQI
Trigger: AATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCCA...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTTGGACTTCAGTCTTTTaGGAAGGGGCTCACCAAATT +
Preference number: 5 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFWTSVF*EGAHQI
Trigger: AATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCCA...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AAAATGCTTGTCTGTAGACACACTCTCTTAAAAATCCTACAAGCCATCCCAACGGAATACACACAGTATTaGAACAAGCAGGTTTACAAC +
Preference number: 5 (lower is better)
Translates to: KMLVCRHTLLKILQAIPTEYTQY*NKQVYN
Trigger: GTTGTAAACCTGCTTGTTCAAATACTGTGTGTATTC...CGTTGGGATGGCTTGTAGGATTTTTAAGAGAGTGTGTCTACAGACAAGCATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp CCCAACCCAAATGATTTCTTTTCAGCAGCGCTCAAGTATGCAAAAATTCCACTTGAATACACACAGTATTaGAACAAGCAGGTTTACAAC +
Preference number: 5 (lower is better)
Translates to: PNPNDFFSAALKYAKIPLEYTQY*NKQVYN
Trigger: GTTGTAAACCTGCTTGTTCAAATACTGTGTGTATTC...AAGTGGAATTTTTGCATACTTGAGCGCTGCTGAAAAGAAATCATTTGGGTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS-3UTR CAA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCAGCAGCAACATCGGTTaGTTTTTCCTTGTGATGTCT +
Preference number: 5 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSSSNIG*FFLVMS
Trigger: AGACATCACAAGGAAAAACAAACCGATGTTGCTGCT...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp ATATTATTCAGGGACAAAATAGAGATTTCCAGTCCCCATGTATGTAAGTTCCAACTACAGAGAAAATGCTaGTCTGTAGACACACTCTCT +
Preference number: 5 (lower is better)
Translates to: ILFRDKIEISSPHVCKFQLQRKC*SVDTLS
Trigger: AGAGAGTGTGTCTACAGACAAGCATTTTCTCTGTAG...TTGGAACTTACATACATGGGGACTGGAAATCTCTATTTTGTCCCTGAATAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp AACAGAACAACTTTACACAACTGTAGTGTTCCTTGCAGATTCCTCATATGTTTTTTTTACTCAAAGAAATaGCCGGGCAATTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: NRTTLHNCSVPCRFLICFFYSKK*PGNCEE
Trigger: CTCTTCACAATTGCCCGGCAATTTCTTTGAGTAAAA...AAAACATATGAGGAATCTGCAAGGAACACTACAGTTGTGTAAAGTTGTTCTGTT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS-3UTR CAA 90 bp TTCACCCAAATGCCAGATACATTAAGACTACCAAATACAAACCTAAAATGTTCCGAAGAGGTTTCAATTTaGTCTCGGGTCTTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: FTQMPDTLRLPNTNLKCSEEVSI*SRVFLS
Trigger: AGACAAAAAGACCCGAGACAAAATTGAAACCTCTTC...GGAACATTTTAGGTTTGTATTTGGTAGTCTTAATGTATCTGGCATTTGGGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp AGAGGGGCGGCGAGGTCAGGAGAACACGTCCCCGGCTaGCTCCCGTCCACAGACATGGTGGGCGACTCCGCG +
Preference number: 6 (lower is better)
Translates to: RGAARSGEHVPG*LPSTDMVGDSA
Trigger: CGCGGAGTCGCCCACCATGTCTGTGGACGGGAGGCAGCCGGGGACGTGTTCTCCTGACCTCGCCGCCCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp GAGAACACGTCCCCGGCTGCCTCCCGTCCACAGACATaGTGGGCGACTCCGCGCCGGCCCTCCGGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: ENTSPAASRPQT*WATPRRPSGPS
Trigger: AGAAGGACCGGAGGGCCGGCGCGGAGTCGCCCACCATGTCTGTGGACGGGAGGCAGCCGGGGACGTGTTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp AACACGTCCCCGGCTGCCTCCCGTCCACAGACATGGTaGGCGACTCCGCGCCGGCCCTCCGGTCCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: NTSPAASRPQTW*ATPRRPSGPSC
Trigger: ACAAGAAGGACCGGAGGGCCGGCGCGGAGTCGCCCACCATGTCTGTGGACGGGAGGCAGCCGGGGACGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp AGCAGTGAGTGGGCTTCTCCTTGCTACTGGGTAACTTaGGATCCGCGTCCACGGAGGGCGCTTCGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: SSEWASPCYWVT*DPRPRRALRRG
Trigger: CCCACGGCGAAGCGCCCTCCGTGGACGCGGATCCCAAGTTACCCAGTAGCAAGGAGAAGCCCACTCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp GGAGGGCTCTGCTTCCCCTTCGCAGATGGCAGGGATTaGGACTGCGCCGGGAAAGCAGACTTGGGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: GGLCFPFADGRD*DCAGKADLGLG
Trigger: ACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp CAGGAAGTCCTCCCTCGAGGACGGCATTCCTCCTTGTaGAGAGTCTGTCTGCGCGCTGCTGGTACCGAAAGC +
Preference number: 6 (lower is better)
Translates to: QEVLPRGRHSSL*RVCLRAAGTES
Trigger: GCTTTCGGTACCAGCAGCGCGCAGACAGACTCTCCACAAGGAGGAATGCCGTCCTCGAGGGAGGACTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp GAGGGCTCTGCTTCCCCTTCGCAGATGGCAGGGATTTaGACTGCGCCGGGAAAGCAGACTTGGGCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: EGSASPSQMAGI*TAPGKQTWAWV
Trigger: AACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp GAGATGCTCTCGGCCGCGTGCACCTGGACGACCTCGTaGATCGTTGCTGGACTACTCTCCAAGCCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: EMLSAACTWTTS*IVAGLLSKPCC
Trigger: GCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGTGCACGCGGCCGAGAGCATCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp CTGCAGGAAGTCCTCCCTCGAGGACGGCATTCCTCCTaGTGGAGAGTCTGTCTGCGCGCTGCTGGTACCGAA +
Preference number: 6 (lower is better)
Translates to: LQEVLPRGRHSS*WRVCLRAAGTE
Trigger: TTCGGTACCAGCAGCGCGCAGACAGACTCTCCACAAGGAGGAATGCCGTCCTCGAGGGAGGACTTCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp CCTGGCCCAGGAGGGCTCTGCTTCCCCTTCGCAGATGGCAGGGATTaGGACTGCGCCGGGAAAGCAGACTTGGGCTTGGGTTTACAGAAA +
Preference number: 6 (lower is better)
Translates to: PGPGGLCFPFADGRD*DCAGKADLGLGLQK
Trigger: TTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAGCCCTCCTGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 72 bp AGATGCTCTCGGCCGCGTGCACCTGGACGACCTCGTTaGTCGTTGCTGGACTACTCTCCAAGCCTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: RCSRPRAPGRPR*SLLDYSPSLAA
Trigger: TGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGTGCACGCGGCCGAGAGCATCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp CTCGGCCGCGTGCACCTGGACGACCTCGTTGATCGTTaGTGGACTACTCTCCAAGCCTTGCTGCAGTTTGCT +
Preference number: 6 (lower is better)
Translates to: LGRVHLDDLVDR*WTTLQALLQFA
Trigger: AGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGTGCACGCGGCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp GGAGCATCTTCTCCAAAGTGGAGGTCGAGCCAGGCCTaGAGAATGGGCGTGTCCCGAGGGTTAAATGCCCTC +
Preference number: 6 (lower is better)
Translates to: GASSPKWRSSQA*RMGVSRGLNAL
Trigger: GAGGGCATTTAACCCTCGGGACACGCCCATTCTGCAGGCCTGGCTCGACCTCCACTTTGGAGAAGATGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431687.5
CDS CCA 72 bp AACTTGGGATCCGCGTCCACGGAGGGCGCTTCGCCGTaGGAGTGTTTGCACTTCTCTTTCTCTTGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: NLGSASTEGASP*ECLHFSFSCER
Trigger: CCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCCCACGGCGAAGCGCCCTCCGTGGACGCGGATCCCAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp GAGAATCGACCTCGCTGGAGCTCAGGAACCTTGGTTTaGGAGGCAGCGCCTGCGACGGATACACACAGTCCT +
Preference number: 6 (lower is better)
Translates to: ENRPRWSSGTLV*EAAPATDTHSP
Trigger: AGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CAA 90 bp AACTTGGGATCCGCGTCCACGGAGGGCGCTTCGCCGTGGGAGTGTTaGCACTTCTCTTTCTCTTGCGAGAGGCCTGCACAACTGCCCTTA +
Preference number: 6 (lower is better)
Translates to: NLGSASTEGASPWEC*HFSFSCERPAQLPL
Trigger: TAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCCCACGGCGAAGCGCCCTCCGTGGACGCGGATCCCAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp CAGTCAGCACATTTGGAGAATCGACCTCGCTGGAGCTCAGGAACCTaGGTTTGGGAGGCAGCGCCTGCGACGGATACACACAGTCCTGCG +
Preference number: 6 (lower is better)
Translates to: QSAHLENRPRWSSGT*VWEAAPATDTHSPA
Trigger: CGCAGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CAA 90 bp AGCACATTTGGAGAATCGACCTCGCTGGAGCTCAGGAACCTTGGTTaGGGAGGCAGCGCCTGCGACGGATACACACAGTCCTGCGGTAAC +
Preference number: 6 (lower is better)
Translates to: STFGESTSLELRNLG*GGSACDGYTQSCGN
Trigger: GTTACCGCAGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS TCA 72 bp GGCTGTCGTTCTTGGCGGGGTAGTCGATGGAACCATTaGTGTTACTGCTGCCGAGGGTGGGCTGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: GCRSWRGSRWNH*CYCCRGWAEKE
Trigger: CTCCTTCTCAGCCCACCCTCGGCAGCAGTAACATCAATGGTTCCATCGACTACCCCGCCAAGAACGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp CTCTGCTTCCCCTTCGCAGATGGCAGGGATTTGGACTaGGCCGGGAAAGCAGACTTGGGCTTGGGTTTACAG +
Preference number: 6 (lower is better)
Translates to: LCFPFADGRDLD*AGKADLGLGLQ
Trigger: CTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp GGCACTCCGATTACAGAAATAGTCTCTTCCCGGAGGTaGCCACGGGCTGTCGTTCTTGGCGGGGTAGTCGAT +
Preference number: 6 (lower is better)
Translates to: GTPITEIVSSRR*PRAVVLGGVVD
Trigger: ATCGACTACCCCGCCAAGAACGACAGCCCGTGGGCACCTCCGGGAAGAGACTATTTCTGTAATCGGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp CTGGAGCTCAGGAACCTTGGTTTGGGAGGCAGCGCCTaGGACGGATACACACAGTCCTGCGGTAACAGTGAT +
Preference number: 6 (lower is better)
Translates to: LELRNLGLGGSA*DGYTQSCGNSD
Trigger: ATCACTGTTACCGCAGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 72 bp GGCCGCGTGCACCTGGACGACCTCGTTGATCGTTGCTaGACTACTCTCCAAGCCTTGCTGCAGTTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GRVHLDDLVDRC*TTLQALLQFAS
Trigger: AGAAGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGTGCACGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp ATAGAAGGTCGGGGACGACCTGCCCTTCAGTGTTCCTaGAGCATCTTCTCCAAAGTGGAGGTCGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: IEGRGRPALQCS*SIFSKVEVEPG
Trigger: GCCTGGCTCGACCTCCACTTTGGAGAAGATGCTCCAGGAACACTGAAGGGCAGGTCGTCCCCGACCTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431687.5
ENST00000540425.1
CDS CAA 72 bp CATTTGGAGAATCGACCTCGCTGGAGCTCAGGAACCTaGGTTTGGGAGGCAGCGCCTGCGACGGATACACAC +
Preference number: 6 (lower is better)
Translates to: HLENRPRWSSGT*VWEAAPATDTH
Trigger: GTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS TCA 72 bp AGCTGCCAAGCCTGGAAGGTGGTGAACGGATCGAGCTaGGGGATGCATCTGACAGGCTTCTTCCCCGTTTCA +
Preference number: 6 (lower is better)
Translates to: SCQAWKVVNGSS*GMHLTGFFPVS
Trigger: TGAAACGGGGAAGAAGCCTGTCAGATGCATCCCTCAGCTCGATCCGTTCACCACCTTCCAGGCTTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp TTGGGAGGCAGCGCCTGCGACGGATACACACAGTCCTaGGGTAACAGTGATGTGATGCCTCTGACCATATGG +
Preference number: 6 (lower is better)
Translates to: LGGSACDGYTQS*GNSDVMPLTIW
Trigger: CCATATGGTCAGAGGCATCACATCACTGTTACCGCAGGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 72 bp ACTAGAGAGGGGAGGCACATCTTTTCCCAGCAACGCTaGCGGGCATCCGGTACGTCGACTTCTAAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: TREGRHIFSQQR*RASGTSTSKQG
Trigger: TCCTTGCTTAGAAGTCGACGTACCGGATGCCCGCCAGCGTTGCTGGGAAAAGATGTGCCTCCCCTCTCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp GGATGCTGGACTACCAGCAGGCACACAAGTGTAAAGTaGCCCGGAGCCACCATAGGGCTTCTGAACAGTCAG +
Preference number: 6 (lower is better)
Translates to: GCWTTSRHTSVK*PGATIGLLNSQ
Trigger: CTGACTGTTCAGAAGCCCTATGGTGGCTCCGGGCCACTTTACACTTGTGTGCCTGCTGGTAGTCCAGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CAA 72 bp GATGGCAGGGATTTGGACTGCGCCGGGAAAGCAGACTaGGGCTTGGGTTTACAGAAACTAGAGAGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: DGRDLDCAGKAD*GLGLQKLERGG
Trigger: GCCTCCCCTCTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp AAACATCTCAGATTGCTGTTGCCTGGTGGCGGCCCCTaGGACCCCCACATTCTGCTGTGGTCTGTGGGACTT +
Preference number: 6 (lower is better)
Translates to: KHLRLLLPGGGP*DPHILLWSVGL
Trigger: AAGTCCCACAGACCACAGCAGAATGTGGGGGTCCAAGGGGCCGCCACCAGGCAACAGCAATCTGAGATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp GTTGAACAACTGCAGGAAGTCCTCCCTCGAGGACGGCATTCCTCCTaGTGGAGAGTCTGTCTGCGCGCTGCTGGTACCGAAAGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: VEQLQEVLPRGRHSS*WRVCLRAAGTESSF
Trigger: AAAACTGCTTTCGGTACCAGCAGCGCGCAGACAGACTCTCCACAAGGAGGAATGCCGTCCTCGAGGGAGGACTTCCTGCAGTTGTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp GCAGATGGCAGGGATTTGGACTGCGCCGGGAAAGCAGACTTGGGCTaGGGTTTACAGAAACTAGAGAGGGGAGGCACATCTTTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: ADGRDLDCAGKADLG*GLQKLERGGTSFPS
Trigger: GCTGGGAAAAGATGTGCCTCCCCTCTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp CGGGCTGGTCAACGTCAAGGGCAACCACGCTGGACTTCAGTCTTTTaGGAAGGGGCTCACCAAATTCTGCTGCAGTATTGCTGGCACTCC +
Preference number: 6 (lower is better)
Translates to: RAGQRQGQPRWTSVF*EGAHQILLQYCWHS
Trigger: GGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCCAGCGTGGTTGCCCTTGACGTTGACCAGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp AAAGTGGCCCGGAGCCACCATAGGGCTTCTGAACAGTCAGCACATTaGGAGAATCGACCTCGCTGGAGCTCAGGAACCTTGGTTTGGGAG +
Preference number: 6 (lower is better)
Translates to: KVARSHHRASEQSAH*ENRPRWSSGTLVWE
Trigger: CTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTCAGAAGCCCTATGGTGGCTCCGGGCCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS GCA 72 bp CAAGCTCCTTCTCGGAACTCGAATCGTCGTTGTCGGTaGTCCCTTCTTGCCCCGATTCCTTCACTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: QAPSRNSNRRCR*SLLAPIPSLLG
Trigger: GCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGAGAAGGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp GAGCTGGGCAATCCTCATAGAAGGTCGGGGACGACCTaGCCTTCAGTGTTCCTGGAGCATCTTCTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: ELGNPHRRSGTT*PSVFLEHLLQS
Trigger: ACTTTGGAGAAGATGCTCCAGGAACACTGAAGGGCAGGTCGTCCCCGACCTTCTATGAGGATTGCCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431687.5
ENST00000540425.1
CDS CCA 72 bp TATGGTACTTGGGAAGGTCATAGCCTCTTCTGTAATTaGCCCCGGGCTGGTCAACGTCAAGGGCAACCACGC +
Preference number: 6 (lower is better)
Translates to: YGTWEGHSLFCN*PRAGQRQGQPR
Trigger: GCGTGGTTGCCCTTGACGTTGACCAGCCCGGGGCCAATTACAGAAGAGGCTATGACCTTCCCAAGTACCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CCA 72 bp GGAGCCACCATAGGGCTTCTGAACAGTCAGCACATTTaGAGAATCGACCTCGCTGGAGCTCAGGAACCTTGG +
Preference number: 6 (lower is better)
Translates to: GATIGLLNSQHI*RIDLAGAQEPW
Trigger: CCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTCAGAAGCCCTATGGTGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CAA 72 bp CGGAGCCACCATAGGGCTTCTGAACAGTCAGCACATTaGGAGAATCGACCTCGCTGGAGCTCAGGAACCTTG +
Preference number: 6 (lower is better)
Translates to: RSHHRASEQSAH*ENRPRWSSGTL
Trigger: CAAGGTTCCTGAGCTCCAGCGAGGTCGATTCTCCAAATGTGCTGACTGTTCAGAAGCCCTATGGTGGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000437222.1
CDS CAA 90 bp CTTGGCCTGTATCTGCAGTCAGCTGCGGTCTCCGTTTGCTTCTCTTaGGGGCTAACTTCAAGGTTATGGGTGGTACTGCCATCCGGAGGA +
Preference number: 6 (lower is better)
Translates to: LGLYLQSAAVSVCFS*GLTSRLWVVLPSGG
Trigger: TCCTCCGGATGGCAGTACCACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp CCCTTCGCAGATGGCAGGGATTTGGACTGCGCCGGGAAAGCAGACTaGGGCTTGGGTTTACAGAAACTAGAGAGGGGAGGCACATCTTTT +
Preference number: 6 (lower is better)
Translates to: PFADGRDLDCAGKAD*GLGLQKLERGGTSF
Trigger: AAAAGATGTGCCTCCCCTCTCTAGTTTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp TCGTTGCTGGACTACTCTCCAAGCCTTGCTGCAGTTTaGTTCTGGCCCCCGATTTGCCATTATGTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: SLLDYSPSLAAV*FWPPICHYVSA
Trigger: TGCGGACACATAATGGCAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp CTCGGAACTCGAATCGTCGTTGTCGGTGCTCCCTTCTaGCCCCGATTCCTTCACTTCTTGGCAAATGGCAAC +
Preference number: 6 (lower is better)
Translates to: LGTRIVVVGAPF*PRFLHFLANGN
Trigger: GTTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp GTTTCTCCAAGCTCCTTCTCGGAACTCGAATCGTCGTaGTCGGTGCTCCCTTCTTGCCCCGATTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: VSPSSFSELESS*SVLPSCPDSFT
Trigger: AGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGAGAAGGAGCTTGGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp ATCGTCGTTGTCGGTGCTCCCTTCTTGCCCCGATTCCTTCACTTCTaGGCAAATGGCAACTTTTCCTTTGGTAGCCAGCTGCCAAGCCTG +
Preference number: 6 (lower is better)
Translates to: IVVVGAPFLPRFLHF*ANGNFSFGSQLPSL
Trigger: CAGGCTTGGCAGCTGGCTACCAAAGGAAAAGTTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp ACCTCGTTGATCGTTGCTGGACTACTCTCCAAGCCTTaGTGCAGTTTGCTTCTGGCCCCCGATTTGCCATTA +
Preference number: 6 (lower is better)
Translates to: TSLIVAGLLSKP*CSLLLAPDLPL
Trigger: TAATGGCAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp TCGGAACTCGAATCGTCGTTGTCGGTGCTCCCTTCTTaGCCCGATTCCTTCACTTCTTGGCAAATGGCAACT +
Preference number: 6 (lower is better)
Translates to: SELESSLSVLPS*PDSFTSWQMAT
Trigger: AGTTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp CTTGGCCTGTATCTGCAGTCAGCTGCGGTCTCCGTTTaGTTCTCTTTGGGGCTAACTTCAAGGTTATGGGTG +
Preference number: 6 (lower is better)
Translates to: LGLYLQSAAVSV*FSLGLTSRLWV
Trigger: CACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp GTGACAATCCACACTTGGCCTGTATCTGCAGTCAGCTaGGGTCTCCGTTTGCTTCTCTTTGGGGCTAACTTC +
Preference number: 6 (lower is better)
Translates to: VTIHTWPVSAVS*GLRLLLFGANF
Trigger: GAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTGTGGATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp GTCGGTGCTCCCTTCTTGCCCCGATTCCTTCACTTCTaGGCAAATGGCAACTTTTCCTTTGGTAGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VGAPFLPRFLHF*ANGNFSFGSQL
Trigger: CAGCTGGCTACCAAAGGAAAAGTTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp CGCTTCGCCGTGGGAGTGTTTGCACTTCTCTTTCTCTaGCGAGAGGCCTGCACAACTGCCCTTATTTGTTTC +
Preference number: 6 (lower is better)
Translates to: RFAVGVFALLFL*REACTTALICF
Trigger: GAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCCCACGGCGAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp ACAATCCACACTTGGCCTGTATCTGCAGTCAGCTGCGGTCTCCGTTaGCTTCTCTTTGGGGCTAACTTCAAGGTTATGGGTGGTACTGCC +
Preference number: 6 (lower is better)
Translates to: TIHTWPVSAVSCGLR*LLFGANFKVMGGTA
Trigger: GGCAGTACCACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTGTGGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp TGCCGAGGGTGGGCTGAGAAGGAGCTACTGGAAGAGGTTTCAATTTaGTCTCGGGTCTTTTTGTCTTATCCGGTGCAGGGGAAACACTGG +
Preference number: 6 (lower is better)
Translates to: CRGWAEKELLEEVSI*SRVFLSYPVQGKHW
Trigger: CCAGTGTTTCCCCTGCACCGGATAAGACAAAAAGACCCGAGACAAAATTGAAACCTCTTCCAGTAGCTCCTTCTCAGCCCACCCTCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp CCCTTATTTGTTTCTCCAAGCTCCTTCTCGGAACTCGAATCGTCGTaGTCGGTGCTCCCTTCTTGCCCCGATTCCTTCACTTCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: PLFVSPSSFSELESS*SVLPSCPDSFTSWQ
Trigger: TTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGAGAAGGAGCTTGGAGAAACAAATAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp TGCACTTCTCTTTCTCTTGCGAGAGGCCTGCACAACTGCCCTTATTaGTTTCTCCAAGCTCCTTCTCGGAACTCGAATCGTCGTTGTCGG +
Preference number: 6 (lower is better)
Translates to: CTSLSLARGLHNCPY*FLQAPSRNSNRRCR
Trigger: CCGACAACGACGATTCGAGTTCCGAGAAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp TCGTTGATCGTTGCTGGACTACTCTCCAAGCCTTGCTaGAGTTTGCTTCTGGCCCCCGATTTGCCATTATGT +
Preference number: 6 (lower is better)
Translates to: SLIVAGLLSKPC*SLLLAPDLPLC
Trigger: ACATAATGGCAAATCGGGGGCCAGAAGCAAACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp GCTTCGCCGTGGGAGTGTTTGCACTTCTCTTTCTCTTaGGAGAGGCCTGCACAACTGCCCTTATTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: ASPWECLHFSFS*ERPAQLPLFVS
Trigger: AGAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCCCACGGCGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp TCCGTTTGCTTCTCTTTGGGGCTAACTTCAAGGTTATaGGTGGTACTGCCATCCGGAGGAGGAGTAACATCC +
Preference number: 6 (lower is better)
Translates to: SVCFSLGLTSRL*VVLPSGGGVTS
Trigger: GGATGTTACTCCTCCTCCGGATGGCAGTACCACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp AGCACTGACATCCACCAAGACCTTCTAACGTCGAGCTaGATGCTGGACTACCAGCAGGCACACAAGTGTAAA +
Preference number: 6 (lower is better)
Translates to: STDIHQDLLTSS*MLDYQQAHKCK
Trigger: TTTACACTTGTGTGCCTGCTGGTAGTCCAGCATCCAGCTCGACGTTAGAAGGTCTTGGTGGATGTCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437222.1
CDS CAA 72 bp TATCTGCAGTCAGCTGCGGTCTCCGTTTGCTTCTCTTaGGGGCTAACTTCAAGGTTATGGGTGGTACTGCCA +
Preference number: 6 (lower is better)
Translates to: YLQSAAVSVCFS*GLTSRLWVVLP
Trigger: TGGCAGTACCACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp ACTTGGCCTGTATCTGCAGTCAGCTGCGGTCTCCGTTaGCTTCTCTTTGGGGCTAACTTCAAGGTTATGGGT +
Preference number: 6 (lower is better)
Translates to: TWPVSAVSCGLR*LLFGANFKVMG
Trigger: ACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp CAACGTCAAGGGCAACCACGCTGGACTTCAGTCTTTTaGGAAGGGGCTCACCAAATTCTGCTGCAGTATTGC +
Preference number: 6 (lower is better)
Translates to: QRQGQPRWTSVF*EGAHQILLQYC
Trigger: GCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCCAGCGTGGTTGCCCTTGACGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp AAGCTCCTTCTCGGAACTCGAATCGTCGTTGTCGGTGCTCCCTTCTaGCCCCGATTCCTTCACTTCTTGGCAAATGGCAACTTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: KLLLGTRIVVVGAPF*PRFLHFLANGNFSF
Trigger: AAAGGAAAAGTTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTCGAGTTCCGAGAAGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 72 bp GGGATGCATCTGACAGGCTTCTTCCCCGTTTCAGGGTaGGATTTTGGTCTCAAGTTGAACAACTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GMHLTGFFPVSG*DFGLKLNNCRK
Trigger: CTTCCTGCAGTTGTTCAACTTGAGACCAAAATCTCACCCTGAAACGGGGAAGAAGCCTGTCAGATGCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp TGCACTTCTCTTTCTCTTGCGAGAGGCCTGCACAACTaGCCTTATTTGTTTCTCCAAGCTCCTTCTCGGAAC +
Preference number: 6 (lower is better)
Translates to: CTSLSLARGLHN*PYLFLQAPSRN
Trigger: GTTCCGAGAAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp CCTGAGTATCTTTGTGTGCTGGTGAGAGGACAGCGCTaGCCAGAACATTCTGAAAAACAGAAGGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: PEYLCVLVRGQR*PEHSEKQKASP
Trigger: AGGAGATGCCTTCTGTTTTTCAGAATGTTCTGGGCAGCGCTGTCCTCTCACCAGCACACAAAGATACTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp TCTGACAGGCTTCTTCCCCGTTTCAGGGTGAGATTTTaGTCTCAAGTTGAACAACTGCAGGAAGTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: SDRLLPRFRVRF*SQVEQLQEVLP
Trigger: AGGGAGGACTTCCTGCAGTTGTTCAACTTGAGACCAAAATCTCACCCTGAAACGGGGAAGAAGCCTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp GTTACTGCTGCCGAGGGTGGGCTGAGAAGGAGCTACTaGAAGAGGTTTCAATTTTGTCTCGGGTCTTTTTGT +
Preference number: 6 (lower is better)
Translates to: VTAAEGGLRRSY*KRFQFCLGSFC
Trigger: ACAAAAAGACCCGAGACAAAATTGAAACCTCTTCCAGTAGCTCCTTCTCAGCCCACCCTCGGCAGCAGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp TTGGAAGGGGCTCACCAAATTCTGCTGCAGTATTGCTaGCACTCCGATTACAGAAATAGTCTCTTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: LEGAHQILLQYC*HSDYRNSLFPE
Trigger: CTCCGGGAAGAGACTATTTCTGTAATCGGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp AACGTCAAGGGCAACCACGCTGGACTTCAGTCTTTTTaGAAGGGGCTCACCAAATTCTGCTGCAGTATTGCT +
Preference number: 6 (lower is better)
Translates to: NVKGNHAGLQSF*KGLTKFCCSIA
Trigger: AGCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCCAGCGTGGTTGCCCTTGACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp TGGGCTGAGAAGGAGCTACTGGAAGAGGTTTCAATTTaGTCTCGGGTCTTTTTGTCTTATCCGGTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: WAEKELLEEVSI*SRVFLSYPVQG
Trigger: CCCCTGCACCGGATAAGACAAAAAGACCCGAGACAAAATTGAAACCTCTTCCAGTAGCTCCTTCTCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp GAGCCCCCACGGATAAATTTAAAGGTTTTTCGTGACAATCCACACTaGGCCTGTATCTGCAGTCAGCTGCGGTCTCCGTTTGCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: EPPRINLKVFRDNPH*ACICSQLRSPFASL
Trigger: AAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTGTGGATTGTCACGAAAAACCTTTAAATTTATCCGTGGGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp TCGCACTTGACTTTTATCAAGCGGACTGAGATACTCTaGTTCAACCCGAAGAACTGCTGGTTCACAGAGGGT +
Preference number: 6 (lower is better)
Translates to: SHLTFIKRTEIL*FNPKNCWFTEG
Trigger: ACCCTCTGTGAACCAGCAGTTCTTCGGGTTGAAGCAGAGTATCTCAGTCCGCTTGATAAAAGTCAAGTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp GGAGTGTTTGCACTTCTCTTTCTCTTGCGAGAGGCCTaGACAACTGCCCTTATTTGTTTCTCCAAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: GVFALLFLLREA*TTALICFSKLL
Trigger: AAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAGTGCAAACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp GATATGACACAGGCCTTTTTCCTTCTAACGTCGAGCTaGATGCTGGACTACCAGCAGGCACACAAGTGTAAA +
Preference number: 6 (lower is better)
Translates to: DMTQAFFLLTSS*MLDYQQAHKCK
Trigger: TTTACACTTGTGTGCCTGCTGGTAGTCCAGCATCCAGCTCGACGTTAGAAGGAAAAAGGCCTGTGTCATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 72 bp GAGGTTCTGTTCGCACTTGACTTTTATCAAGCGGACTaGGATACTCTGCTTCAACCCGAAGAACTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: EVLFALDFYQAD*DTLLQPEELLV
Trigger: AACCAGCAGTTCTTCGGGTTGAAGCAGAGTATCTCAGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp GGACTTCAGTCTTTTTGGAAGGGGCTCACCAAATTCTaGTGCAGTATTGCTGGCACTCCGATTACAGAAATA +
Preference number: 6 (lower is better)
Translates to: GLQSFWKGLTKF*CSIAGTPITEI
Trigger: TATTTCTGTAATCGGAGTGCCAGCAATACTGCAGCAGAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp CGGATAAATTTAAAGGTTTTTCGTGACAATCCACACTaGGCCTGTATCTGCAGTCAGCTGCGGTCTCCGTTT +
Preference number: 6 (lower is better)
Translates to: RINLKVFRDNPH*ACICSQLRSPF
Trigger: AAACGGAGACCGCAGCTGACTGCAGATACAGGCCAAGTGTGGATTGTCACGAAAAACCTTTAAATTTATCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS GCA 72 bp CGAAGAACTGCTGGTTCACAGAGGGTAGGCCGGTGTTaGATTAAGACATGTTTATTAAGGTCTTCTGAATGT +
Preference number: 6 (lower is better)
Translates to: RRTAGSQRVGRC*IKTCLLRSSEC
Trigger: ACATTCAGAAGACCTTAATAAACATGTCTTAATGCAACACCGGCCTACCCTCTGTGAACCAGCAGTTCTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp ACATGTTTATTAAGGTCTTCTGAATGTGTGAAGGTCTaGCTGCAGAACATGCAATCCAAGGGCATATACCCC +
Preference number: 6 (lower is better)
Translates to: TCLLRSSECVKV*LQNMQSKGIYP
Trigger: GGGGTATATGCCCTTGGATTGCATGTTCTGCAGCCAGACCTTCACACATTCAGAAGACCTTAATAAACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS TCA 72 bp ATCACTTCTGGCCCATCCATGTACATTAAGAGGGATTaGGTTGGCATGTTTCCTGTCACTTTCGATTGCATA +
Preference number: 6 (lower is better)
Translates to: ITSGPSMYIKRD*VGMFPVTFDCI
Trigger: TATGCAATCGAAAGTGACAGGAAACATGCCAACTCAATCCCTCTTAATGTACATGGATGGGCCAGAAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS TCA 72 bp TTGCAATTCTTTTCCTTGGGAGGTTCTGTTCGCACTTaGCTTTTATCAAGCGGACTGAGATACTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: LQFFSLGGSVRT*LLSSGLRYSAS
Trigger: TGAAGCAGAGTATCTCAGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACCTCCCAAGGAAAAGAATTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 72 bp ATTTTTATGGAAATCCTGAGTATCTTTGTGTGCTGGTaGGAGGACAGCGCTGCCCAGAACATTCTGAAAAAC +
Preference number: 6 (lower is better)
Translates to: IFMEILSIFVCW*EDSAAQNILKN
Trigger: GTTTTTCAGAATGTTCTGGGCAGCGCTGTCCTCTCACCAGCACACAAAGATACTCAGGATTTCCATAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp TATAATCTCAAAGTTCCGTTGGGCAATTTCTGGAGTTaGAATAAGGCCACTTGTAAGACTTGTCACTCACCC +
Preference number: 6 (lower is better)
Translates to: YNLKVPLGNFWS*NKATCKTCHSP
Trigger: GGGTGAGTGACAAGTCTTACAAGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGGAACTTTGAGATTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS CAA 90 bp GTCCTGATTTTTACCATCGTTCTTGACTTCAGCAGCAACATCGGTTaGTTTTTCCTTGTGATGTCTCTCCAAGTGATACCTCAGAGATGT +
Preference number: 6 (lower is better)
Translates to: VLIFTIVLDFSSNIG*FFLVMSLQVIPQRC
Trigger: ACATCTCTGAGGTATCACTTGGAGAGACATCACAAGGAAAAACAAACCGATGTTGCTGCTGAAGTCAAGAACGATGGTAAAAATCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS TCA 72 bp CGACTTCTAAGCAAGGACTTGTTTCGACAGTTTTTATaGACGTCAGGATTGTATTTATGCTCCAGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: RLLSKDLFRQFL*TSGLYLCSSLW
Trigger: CCAGAGACTGGAGCATAAATACAATCCTGACGTTCATAAAAACTGTCGAAACAAGTCCTTGCTTAGAAGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 72 bp CTGTCACTTTCGATTGCATATAATCTCAAAGTTCCGTaGGGCAATTTCTGGAGTTGGAATAAGGCCACTTGT +
Preference number: 6 (lower is better)
Translates to: LSLSIAYNLKVP*GNFWSWNKATC
Trigger: ACAAGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGGAACTTTGAGATTATATGCAATCGAAAGTGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS CAA 72 bp CTTCTGGCCCATCCATGTACATTAAGAGGGATTGAGTaGGCATGTTTCCTGTCACTTTCGATTGCATATAAT +
Preference number: 6 (lower is better)
Translates to: LLAHPCTLRGIE*ACFLSLSIAYN
Trigger: ATTATATGCAATCGAAAGTGACAGGAAACATGCCAACTCAATCCCTCTTAATGTACATGGATGGGCCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS CAA 72 bp TTTACCATCGTTCTTGACTTCAGCAGCAACATCGGTTaGTTTTTCCTTGTGATGTCTCTCCAAGTGATACCT +
Preference number: 6 (lower is better)
Translates to: FTIVLDFSSNIG*FFLVMSLQVIP
Trigger: AGGTATCACTTGGAGAGACATCACAAGGAAAAACAAACCGATGTTGCTGCTGAAGTCAAGAACGATGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CAA 90 bp GCATGTTTCCTGTCACTTTCGATTGCATATAATCTCAAAGTTCCGTaGGGCAATTTCTGGAGTTGGAATAAGGCCACTTGTAAGACTTGT +
Preference number: 6 (lower is better)
Translates to: ACFLSLSIAYNLKVP*GNFWSWNKATCKTC
Trigger: ACAAGTCTTACAAGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGGAACTTTGAGATTATATGCAATCGAAAGTGACAGGAAACATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS CAA 90 bp TGCCAATCACTTCTGGCCCATCCATGTACATTAAGAGGGATTGAGTaGGCATGTTTCCTGTCACTTTCGATTGCATATAATCTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: CQSLLAHPCTLRGIE*ACFLSLSIAYNLKV
Trigger: AACTTTGAGATTATATGCAATCGAAAGTGACAGGAAACATGCCAACTCAATCCCTCTTAATGTACATGGATGGGCCAGAAGTGATTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS GCA 72 bp ATGTGGATCTCAACATCAAAAGCGACTCTAAATGTCTaGCCACATACCTCACAGCTAAATTCATTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: MWISTSKATLNV*PHTSQLNSFSL
Trigger: CAAGGAAAATGAATTTAGCTGTGAGGTATGTGGGCAGACATTTAGAGTCGCTTTTGATGTTGAGATCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302342.3
ENST00000371471.7
CDS CCA 72 bp ATTGCATATAATCTCAAAGTTCCGTTGGGCAATTTCTaGAGTTGGAATAAGGCCACTTGTAAGACTTGTCAC +
Preference number: 6 (lower is better)
Translates to: IAYNLKVPLGNF*SWNKATCKTCH
Trigger: GTGACAAGTCTTACAAGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGGAACTTTGAGATTATATGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5
CDS CCA 72 bp TGTCACTTTCGATTGCATATAATCTCAAAGTTCCGTTaGGCAATTTCTGGAGTTGGAATAAGGCCACTTGTA +
Preference number: 6 (lower is better)
Translates to: CHFRLHIISKFR*AISGVGIRPLV
Trigger: TACAAGTGGCCTTATTCCAACTCCAGAAATTGCCCAACGGAACTTTGAGATTATATGCAATCGAAAGTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302342.3
ENST00000371471.7
ENST00000431687.5