RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF202 (Homo sapiens)

Ensembl gene IDs: ENSG00000166261

Ensembl transcript IDs: ENST00000336139.8, ENST00000525391.1, ENST00000526252.5, ENST00000528306.5, ENST00000529250.5, ENST00000529691.1, ENST00000530393.6, ENST00000530944.1, ENST00000533463.5

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATaGAGGACGTCTCCCCAGTTCTTGCCACTCCCACAATCAGAGAAG +
Preference number: 1 (lower is better)
Translates to: DSPCHALTPYPVLHL*RTSPQFLPLPQSEK
Trigger: CTTCTCTGATTGTGGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR TCA 90 bp CGCTGGGGGAGGGAGCAGCTTGACAAGGTCCACATGAAGCAGCCTTaGGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGGAAA +
Preference number: 1 (lower is better)
Translates to: RWGREQLDKVHMKQP*DFSPTSISPQHQRK
Trigger: TTTCCTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAAGCTGCTCCCTCCCCCAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 90 bp CCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATaGTGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCA +
Preference number: 1 (lower is better)
Translates to: PRFNTFRDVRVLSQG*WGQGVRTVLMVLPA
Trigger: TGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 90 bp TTACTCCTGGTGAATTCCTCAGGGTCCCAGGTTCAACACTTTCCGTaGTGTCAGAGTACTCAGTCAGGGATGATGGGGACAGGGTGTCAG +
Preference number: 1 (lower is better)
Translates to: LLLVNSSGSQVQHFP*CQSTQSGMMGTGCQ
Trigger: CTGACACCCTGTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCTGAGGAATTCACCAGGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 90 bp TGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATaGAACATCCCCTCAAGGCGTAGAGGAAGGCTGAGAGGTTCTGCC +
Preference number: 1 (lower is better)
Translates to: CTPVKEKPQFRLYFG*NIPSRRRGRLRGSA
Trigger: GGCAGAACCTCTCAGCCTTCCTCTACGCCTTGAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 90 bp TGTTTGGCACCTGATAACAATTTGACGCTGGGGGAGGGAGCAGCTTaGCAAGGTCCACATGAAGCAGCCTTGAGATTTTTCGCCCACTTC +
Preference number: 1 (lower is better)
Translates to: CLAPDNNLTLGEGAA*QGPHEAALRFFAHF
Trigger: GAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAAGCTGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTGCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR CCA 90 bp CAGAAGTATCAGGACACTGAAGCCCTGGAAAAGGAATGGGTAAGATaGGAAGTCCCAGAAACCAGGGAACTTGGCTGCAAGTGTTACCTT +
Preference number: 1 (lower is better)
Translates to: QKYQDTEALEKEWVR*EVPETRELGCKCYL
Trigger: AAGGTAACACTTGCAGCCAAGTTCCCTGGTTTCTGGGACTTCCCATCTTACCCATTCCTTTTCCAGGGCTTCAGTGTCCTGATACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR TCA 90 bp GTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCC +
Preference number: 1 (lower is better)
Translates to: VLLLYTHEVEAGALQ*RRSLNSGCTLDETS
Trigger: GGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR GCA 90 bp GGAGAAACTATCTTTTGTGGCAGACATTTCACCCAGGACAAGCTGTaGTTAGGCTTAGATACTTGGTTTAGAAATGCCTGCTTATTAGGA +
Preference number: 1 (lower is better)
Translates to: GETIFCGRHFTQDKL*LGLDTWFRNACLLG
Trigger: TCCTAATAAGCAGGCATTTCTAAACCAAGTATCTAAGCCTAAGCACAGCTTGTCCTGGGTGAAATGTCTGCCACAAAAGATAGTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530393.6
3UTR CCA 90 bp ACCATCTCACTTGTAGTAGAAGTGCTAGGGATGCAACCAAGAGACTaGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAGAA +
Preference number: 1 (lower is better)
Translates to: TISLVVEVLGMQPRD*LNNGKVKCMSILIE
Trigger: TTCTATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTGCATCCCTAGCACTTCTACTACAAGTGAGATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCCTCACCTCCCTTAGGTaGGGGCTGAAAGCAGATCTC +
Preference number: 2 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGLTSLR*GLKADL
Trigger: GAGATCTGCTTTCAGCCCTCACCTAAGGGAGGTGAG...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGCGTAGAGGAAGGCTaGGAGGTTCTGCCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDGVEEG*EVLPRL
Trigger: GAGCCTGGGCAGAACCTCTCAGCCTTCCTCTACGCC...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCGTGTCAGAACAGTCTTaGTGGTCTTGCCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPVSEQS*WSCQQQ
Trigger: CTGTTGCTGGCAAGACCATCAAGACTGTTCTGACAC...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGGCGTAGAGGAAGGCTaGGAGGTTCTGCCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSGVEEG*EVLPRL
Trigger: GAGCCTGGGCAGAACCTCTCAGCCTTCCTCTACGCC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTGGGGAGGGAGCAGCTTaGCAAGGTCCACATGAAGCA +
Preference number: 2 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLGEGAA*QGPHEA
Trigger: TGCTTCATGTGGACCTTGTCAAGCTGCTCCCTCCCC...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCGTGGGCTTGTGCATATaGGGGAATGTGAACGATTTC +
Preference number: 2 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPVGLCI*GNVNDF
Trigger: GAAATCGTTCACATTCCCTCATATGCACAAGCCCAC...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCGCCATTTACTCCTGGTaGATTCCTCAGGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAAIYSW*IPQGPR
Trigger: CCTGGGACCCTGAGGAATTCACCAGGAGTAAATGGC...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTCCCTTAGGTGAGGGCTaGAAGCAGATCTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLPLGEG*KQISSH
Trigger: ATGTGAGGAGATCTGCTTTCAGCCCTCACCTAAGGG...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGCACCTGATAACAATTTaGCGCTGGGGGAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMEHLITI*RWGREQ
Trigger: CTGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTG...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTCCCTTAGGTGAGGGCTaGAAGCAGATCTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSPLGEG*KQISSH
Trigger: ATGTGAGGAGATCTGCTTTCAGCCCTCACCTAAGGG...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCA +
Preference number: 2 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDAGALQ*RRSLNS
Trigger: TGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGC...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGTGCATGGTAAGAAGTaGATCAGACAGCGAGGGATC +
Preference number: 2 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGVHGKK*IRQRGI
Trigger: GATCCCTCGCTGTCTGATTCACTTCTTACCATGCAC...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTCACATGAAGCAGCCTTaGGATTTTTCGCCCACTTCC +
Preference number: 2 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLHMKQP*DFSPTS
Trigger: GGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTG...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CAA 90 bp ACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTaGCCACTCCCACAATCAGAGAAGGTGAGGTTCATAATTATTCAG +
Preference number: 2 (lower is better)
Translates to: TPYPVLHLWRTSPQF*PLPQSEKVRFIIIQ
Trigger: CTGAATAATTATGAACCTCACCTTCTCTGATTGTGGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCCCCTTAGGTGAGGGCTaGAAGCAGATCTCCTCACAT +
Preference number: 2 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSPLGEG*KQISSH
Trigger: ATGTGAGGAGATCTGCTTTCAGCCCTCACCTAAGGG...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAGGCGTAGAGGAAGGCTaGGAGGTTCTGCCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSGVEEG*EVLPRL
Trigger: GAGCCTGGGCAGAACCTCTCAGCCTTCCTCTACGCC...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACAGGTTGTACTTTGGATaGAACATCCCCTCAAGGCGT +
Preference number: 2 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDRLYFG*NIPSRR
Trigger: ACGCCTTGAGGGGATGTTTCATCCAAAGTACAACCT...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTGTGCATGGTAAGAAGTaGATCAGACAGCGAGGGATC +
Preference number: 2 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSVHGKK*IRQRGI
Trigger: GATCCCTCGCTGTCTGATTCACTTCTTACCATGCAC...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGTGTCAGAACAGTCTTaGTGGTCTTGCCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDVSEQS*WSCQQQ
Trigger: CTGTTGCTGGCAAGACCATCAAGACTGTTCTGACAC...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR GCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTAAGGCTGAGAGGTTCTaGCCAGGCTCGTGTTTAGTT +
Preference number: 2 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFKAERF*PGSCLV
Trigger: AACTAAACACGAGCCTGGGCAGAACCTCTCAGCCTT...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR CAA 90 bp TCCTGTGAATGTGTGGCAAAGCCATCAGGACGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGAC +
Preference number: 2 (lower is better)
Translates to: SCECVAKPSGRKPPV*SPELCALRFDPSKD
Trigger: GTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCGTCCTGATGGCTTTGCCACACATTCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGGCAAACCTCCTGTCTTaGGTCCAGAGCTGTGTGCTT +
Preference number: 2 (lower is better)
Translates to: HEAALRFFAHFHFSSASKANLLS*VQSCVL
Trigger: AAGCACACAGCTCTGGACTCAAGACAGGAGGTTTGC...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR GCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGAAGGCTGAGAGGTTCTaGCCAGGCTCGTGTTTAGTT +
Preference number: 2 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHEKAERF*PGSCLV
Trigger: AACTAAACACGAGCCTGGGCAGAACCTCTCAGCCTT...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGCTCACCTCCCTTAGGTaGGGGCTGAAAGCAGATCTC +
Preference number: 2 (lower is better)
Translates to: GGLVHMRECERFHYDRIMLTSLR*GLKADL
Trigger: GAGATCTGCTTTCAGCCCTCACCTAAGGGAGGTGAG...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATTATGCAGTTATCCTGTaGATGTGTGGCAAAGCCATC +
Preference number: 2 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDYAVIL*MCGKAI
Trigger: GATGGCTTTGCCACACATTCACAGGATAACTGCATA...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACTTGACAAGGTCCACATaGAGCAGCCTTGAGATTTTT +
Preference number: 2 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDLTRST*SSLEIF
Trigger: AAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAA...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCATTAGCCATTTACTCCTGGTaGATTCCTCAGGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PVHQNIIDQNENFPVGPLAIYSW*IPQGPR
Trigger: CCTGGGACCCTGAGGAATTCACCAGGAGTAAATGGC...TAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCA +
Preference number: 2 (lower is better)
Translates to: VGGLVHMRECERFHYDRIAGALQ*RRSLNS
Trigger: TGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGC...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCA +
Preference number: 2 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGAGALQ*RRSLNS
Trigger: TGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGC...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAAGCAAACCTCCTGTCTTaGGTCCAGAGCTGTGTGCTT +
Preference number: 2 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEANLLS*VQSCVL
Trigger: AAGCACACAGCTCTGGACTCAAGACAGGAGGTTTGC...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCACACCTGATAACAATTTaGCGCTGGGGGAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSHLITI*RWGREQ
Trigger: CTGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTG...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTGGCCCATGGCAATCATaGTTCTGTAATTGTTATAGT +
Preference number: 2 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLGPWQS*FCNCYS
Trigger: ACTATAACAATTACAGAATCATGATTGCCATGGGCC...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGGTTCAACACTTTCCGTaGTGTCAGAGTACTCAGTCA +
Preference number: 2 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHEVQHFP*CQSTQS
Trigger: TGACTGAGTACTCTGACATCACGGAAAGTGTTGAAC...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCTACTTTATACCCATaGGGTAGAGGCAGGTGCACT +
Preference number: 2 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGPTLYP*GRGRCT
Trigger: AGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGG...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGCCCATGGCAATCATaGTTCTGTAATTGTTATAGT +
Preference number: 2 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDGPWQS*FCNCYS
Trigger: ACTATAACAATTACAGAATCATGATTGCCATGGGCC...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR GCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGAAGGCTGAGAGGTTCTaGCCAGGCTCGTGTTTAGTT +
Preference number: 2 (lower is better)
Translates to: GGLVHMRECERFHYDRIMKAERF*PGSCLV
Trigger: AACTAAACACGAGCCTGGGCAGAACCTCTCAGCCTT...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTATTCAGGTTGTACTTTaGATGAAACATCCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSIQVVL*MKHPLK
Trigger: CTTGAGGGGATGTTTCATCCAAAGTACAACCTGAAT...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGTATCCTGTGAATGTGTaGCAAAGCCATCAGGACGCA +
Preference number: 2 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMYPVNV*QSHQDA
Trigger: TGCGTCCTGATGGCTTTGCCACACATTCACAGGATA...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGGGCCCATGGCAATCATaGTTCTGTAATTGTTATAGT +
Preference number: 2 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHEGPWQS*FCNCYS
Trigger: ACTATAACAATTACAGAATCATGATTGCCATGGGCC...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGTATCCTGTGAATGTGTaGCAAAGCCATCAGGACGCA +
Preference number: 2 (lower is better)
Translates to: GGLVHMRECERFHYDRIMYPVNV*QSHQDA
Trigger: TGCGTCCTGATGGCTTTGCCACACATTCACAGGATA...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAAGGTTGTACTTTGGATaGAACATCCCCTCAAGGCGT +
Preference number: 2 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSRLYFG*NIPSRR
Trigger: ACGCCTTGAGGGGATGTTTCATCCAAAGTACAACCT...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCGTGCATGGTAAGAAGTaGATCAGACAGCGAGGGATC +
Preference number: 2 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVVHGKK*IRQRGI
Trigger: GATCCCTCGCTGTCTGATTCACTTCTTACCATGCAC...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAGTGGGCTTGTGCATATaGGGGAATGTGAACGATTTC +
Preference number: 2 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSVGLCI*GNVNDF
Trigger: GAAATCGTTCACATTCCCTCATATGCACAAGCCCAC...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAATATCATCGACCAAAATaGGAATTTCCCTGTTGGGCC +
Preference number: 2 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEYHRPK*EFPCWA
Trigger: GGCCCAACAGGGAAATTCTCATTTTGGTCGATGATA...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR GCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAACAGCGAGGGATCTATaGAGTTATCCTGTGAATGTG +
Preference number: 2 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSTARDL*SYPVNV
Trigger: CACATTCACAGGATAACTGCATAGATCCCTCGCTGT...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CCA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCATTCAGGTTGTACTTTaGATGAAACATCCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALIQVVL*MKHPLK
Trigger: CTTGAGGGGATGTTTCATCCAAAGTACAACCTGAAT...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR CAA 90 bp ATTCAGCCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTaGGGCCATCATGAGATGCTACTTTCTAGCTCTATGAACATAAAA +
Preference number: 2 (lower is better)
Translates to: IQPHLQGTFNWQQRL*GHHEMLLSSSMNIK
Trigger: TTTTATGTTCATAGAGCTAGAAAGTAGCATCTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CAA 90 bp ATTATTCAGCCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATaGTTGGGCCATCATGAGATGCTACTTTCTAGCTCTATGAACATA +
Preference number: 2 (lower is better)
Translates to: IIQPHLQGTFNWQQR*LGHHEMLLSSSMNI
Trigger: TATGTTCATAGAGCTAGAAAGTAGCATCTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGGCTGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATACACATGAAGCAGCCTTaGGATTTTTCGCCCACTTCC +
Preference number: 2 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIHMKQP*DFSPTS
Trigger: GGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTG...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR TCA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCGTTCAACACTTTCCGTaGTGTCAGAGTACTCAGTCA +
Preference number: 2 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVVQHFP*CQSTQS
Trigger: TGACTGAGTACTCTGACATCACGGAAAGTGTTGAAC...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CCA 90 bp CCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCATTAATTCAGGTTGTACTTTaGATGAAACATCCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: PVHQNIIDQNENFPVGPLIQVVL*MKHPLK
Trigger: CTTGAGGGGATGTTTCATCCAAAGTACAACCTGAAT...TAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR TCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATATTGACAAGGTCCACATaGAGCAGCCTTGAGATTTTT +
Preference number: 2 (lower is better)
Translates to: QPRDWLNNGKVKCMSILILTRST*SSLEIF
Trigger: AAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAA...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR CAA 90 bp ATCTCACTTGTAGTAGAAGTGCTAGGGATGCAACCAAGAGACTGGTaGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAGAAAAA +
Preference number: 2 (lower is better)
Translates to: ISLVVEVLGMQPRDW*NNGKVKCMSILIEK
Trigger: TTTTTCTATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTGCATCCCTAGCACTTCTACTACAAGTGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCCGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLARKPPV*SPELCA
Trigger: AGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCG...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR TCA 72 bp TTGGATGAAACATCCCCTCAAGGCGTAGAGGAAGGCTaGGAGGTTCTGCCCAGGCTCGTGTTTAGTTGCAGG +
Preference number: 3 (lower is better)
Translates to: LDETSPQGVEEG*EVLPRLVFSCR
Trigger: CCTGCAACTAAACACGAGCCTGGGCAGAACCTCTCAGCCTTCCTCTACGCCTTGAGGGGATGTTTCATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGCACCTGATAACAATTaGACGCTGGGGGAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGAPDNN*TLGEGA
Trigger: TGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTGC...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTGCACCTGATAACAATTaGACGCTGGGGGAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLAPDNN*TLGEGA
Trigger: TGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTGC...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CCA 72 bp TGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATaGAGGACGTCTCCCCAGTTCTTGCCACTCCCACAA +
Preference number: 3 (lower is better)
Translates to: CHALTPYPVLHL*RTSPQFLPLPQ
Trigger: TTGTGGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CAA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTCGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSRKPPV*SPELCA
Trigger: AGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCG...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACCCACATGAAGCAGCCTaGAGATTTTTCGCCCACTTC +
Preference number: 3 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDPHEAA*RFFAHF
Trigger: GAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTGG...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCTGGCAACAGAGATTGTaGGGCCATCATGAGATGCTA +
Preference number: 3 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAWQQRL*GHHEML
Trigger: TAGCATCTCATGATGGCCCAACAATCTCTGTTGCCA...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR TCA 72 bp GTGAATTCCTCAGGGTCCCAGGTTCAACACTTTCCGTaGTGTCAGAGTACTCAGTCAGGGATGATGGGGACA +
Preference number: 3 (lower is better)
Translates to: VNSSGSQVQHFP*CQSTQSGMMGT
Trigger: TGTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCTGAGGAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR GCA 72 bp GGAGAAGAAACCAGGCACAGAAGACTCTCCCTGTCATaGTTTAACCCCATACCCTGTGCTCCACTTATGGAG +
Preference number: 3 (lower is better)
Translates to: GEETRHRRLSLS*FNPIPCAPLME
Trigger: CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCTGGTTTCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CAA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGGGTGTCAGAACAGTCTaGATGGTCTTGCCAGCAACA +
Preference number: 3 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMEGVRTV*MVLPAT
Trigger: TGTTGCTGGCAAGACCATCAAGACTGTTCTGACACC...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR TCA 72 bp AGGGAGCAGCTTGACAAGGTCCACATGAAGCAGCCTTaGGATTTTTCGCCCACTTCCATTTCTCCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: REQLDKVHMKQP*DFSPTSISPQH
Trigger: ATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAAGCTGCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTCGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCRKPPV*SPELCA
Trigger: AGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCG...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACCAACCAAGAGACTGGTaGAATAACGGGAAGGTTAAA +
Preference number: 3 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNQPRDW*NNGKVK
Trigger: TTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 72 bp GTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATaGAACATCCCCTCAAGGCGTAGAGGAAGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: VKEKPQFRLYFG*NIPSRRRGRLR
Trigger: TCTCAGCCTTCCTCTACGCCTTGAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTGTAACAGCCTATTTTTaGGACGATATAGGAACCACG +
Preference number: 3 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSVTAYF*DDIGTT
Trigger: CGTGGTTCCTATATCGTCCAAAAAATAGGCTGTTAC...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 72 bp CTTTATACCCATGAGGTAGAGGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCAGGTTGTACTTTGGAT +
Preference number: 3 (lower is better)
Translates to: LYTHEVEAGALQ*RRSLNSGCTLD
Trigger: ATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACCTCATGGGTATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGCAACCAAGAGACTGGTaGAATAACGGGAAGGTTAAA +
Preference number: 3 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHEQPRDW*NNGKVK
Trigger: TTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CAA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACCTTATTTTCCATAATTaGGTCTTAGTCGTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDLIFHN*VLVVLQ
Trigger: CTGGAGAACGACTAAGACCAAATTATGGAAAATAAG...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCACGTCTCCCCAGTTCTaGCCACTCCCACAATCAGAG +
Preference number: 3 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVTSPQF*PLPQSE
Trigger: CTCTGATTGTGGGAGTGGCAAGAACTGGGGAGACGT...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR TCA 72 bp GACCAAACCAGTCCATCAGAATATCATCGACCAAAATaGGAATTTCCCTGTTGGGCCATTAGGGTTGGAGTC +
Preference number: 3 (lower is better)
Translates to: DQTSPSEYHRPK*EFPCWAIRVGV
Trigger: GACTCCAACCCTAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CAA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTTTGGCCACTTTCAACTaGAAGCTGTTGAGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCLATFN*KLLSSL
Trigger: AAGACTGCTCAACAGCTTCAAGTTGAAAGTGGCCAA...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR GCA 72 bp ATCTTTTGTGGCAGACATTTCACCCAGGACAAGCTGTaGTTAGGCTTAGATACTTGGTTTAGAAATGCCTGC +
Preference number: 3 (lower is better)
Translates to: IFCGRHFTQDKL*LGLDTWFRNAC
Trigger: GCAGGCATTTCTAAACCAAGTATCTAAGCCTAAGCACAGCTTGTCCTGGGTGAAATGTCTGCCACAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530393.6
3UTR-3UTR CAA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGAATTCAGGTTGTACTTaGGATGAAACATCCCCTCAA +
Preference number: 3 (lower is better)
Translates to: HEAALRFFAHFHFSSASKNSGCT*DETSPQ
Trigger: TTGAGGGGATGTTTCATCCAAAGTACAACCTGAATT...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAGCACCTGATAACAATTaGACGCTGGGGGAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIAPDNN*TLGEGA
Trigger: TGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTGC...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 72 bp AAACAACACAAATACATGAAAGCCATTTACTCCTGGTaGATTCCTCAGGGTCCCAGGTTCAACACTTTCCGT +
Preference number: 3 (lower is better)
Translates to: KQHKYMKAIYSW*IPQGPRFNTFR
Trigger: ACGGAAAGTGTTGAACCTGGGACCCTGAGGAATTCACCAGGAGTAAATGGCTTTCATGTATTTGTGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CCA 72 bp CTTGTAGTAGAAGTGCTAGGGATGCAACCAAGAGACTaGTTGAATAACGGGAAGGTTAAATGCATGAGTATT +
Preference number: 3 (lower is better)
Translates to: LVVEVLGMQPRD*LNNGKVKCMSI
Trigger: AATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTGCATCCCTAGCACTTCTACTACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTAATTCAGGTTGTACTTaGGATGAAACATCCCCTCAA +
Preference number: 3 (lower is better)
Translates to: MVRSESDSEGSMQLSCECNSGCT*DETSPQ
Trigger: TTGAGGGGATGTTTCATCCAAAGTACAACCTGAATT...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR-3UTR CAA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCTTGGCCACTTTCAACTaGAAGCTGTTGAGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVLATFN*KLLSSL
Trigger: AAGACTGCTCAACAGCTTCAAGTTGAAAGTGGCCAA...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAGTAACAGCCTATTTTTaGGACGATATAGGAACCACG +
Preference number: 3 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIVTAYF*DDIGTT
Trigger: CGTGGTTCCTATATCGTCCAAAAAATAGGCTGTTAC...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR GCA 72 bp GTAAGATGGGAAGTCCCAGAAACCAGGGAACTTGGCTaGAAGTGTTACCTTTATTTATTTCATATATGTATA +
Preference number: 3 (lower is better)
Translates to: VRWEVPETRELG*KCYLYLFHICI
Trigger: TATACATATATGAAATAAATAAAGGTAACACTTGCAGCCAAGTTCCCTGGTTTCTGGGACTTCCCATCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAAATTCAGGTTGTACTTaGGATGAAACATCCCCTCAA +
Preference number: 3 (lower is better)
Translates to: QPRDWLNNGKVKCMSILINSGCT*DETSPQ
Trigger: TTGAGGGGATGTTTCATCCAAAGTACAACCTGAATT...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
3UTR TCA 72 bp TATTTCATATATGTATATTTCCAGAAGGACAACGGTTaGCTGGTATTAAGACCAAACCAGTCCATCAGAATA +
Preference number: 3 (lower is better)
Translates to: YFIYVYFQKDNG*LVLRPNQSIRI
Trigger: TATTCTGATGGACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATATATGAAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGACGCTGCGCTGTGGGTaGAGCAGCGCCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRTLRCG*SSARTR
Trigger: GCGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGT...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCGGGACCTCGCTCTCCTaGAGGGTCTGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPGTSLS*RVWSSS
Trigger: AGAGGAGCTCCAGACCCTGCAGGAGAGCGAGGTCCC...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCGTGTTCTCTGATGCCTaGCGAGGTGGTCCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPVFSDA*RGGPCD
Trigger: GTCGCAGGGACCACCTCGTCAGGCATCAGAGAACAC...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTACGCTGCGCTGTGGGTaGAGCAGCGCCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSTLRCG*SSARTR
Trigger: GCGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGT...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCGGGGAGGGAGCAGCTTaGCAAGGTCCACATGAAGCA +
Preference number: 4 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPGEGAA*QGPHEA
Trigger: TGCTTCATGTGGACCTTGTCAAGCTGCTCCCTCCCC...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGTCCTGGTGTGGACGCTaGTCTGCCGGTGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRSWCGR*SAGAPR
Trigger: TCTGGGGGCACCGGCAGAGCAGCGTCCACACCAGGA...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGCGTGCGTCTTCCGGTaGGCCAGGTACCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRACVFR*ARYRLC
Trigger: ACACAGGCGGTACCTGGCGCACCGGAAGACGCACGC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCAGTTCCTCAGCAGCGTaGGTCTTCCGGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGSSSAA*VFRCAR
Trigger: CCTGGCGCACCGGAAGACGCACGCTGCTGAGGAACT...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACCTCCTCGCCACTTTCTaGCCGTTGGCCCCGCACCCA +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNLLATF*PLAPHP
Trigger: TGGGTGCGGGGCCAACGGCCAGAAAGTGGCGAGGAG...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACTGGGTCCTCGGGCACTaGGACCTCGCTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNWVLGH*DLALLQ
Trigger: CTGCAGGAGAGCGAGGTCCCAGTGCCCGAGGACCCA...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCTCGGCAGGGCCTCACTaGGGCGTGTCCTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLASAGPH*GVSSQV
Trigger: CACTTGAGAGGACACGCCTCAGTGAGGCCCTGCCGA...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGGCGTAGAGGAAGGCTaGGAGGTTCTGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRGVEEG*EVLPRL
Trigger: GAGCCTGGGCAGAACCTCTCAGCCTTCCTCTACGCC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTACGCTGCTCTGCCGGTaGCCCCAGATCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLTLLCR*PQIWAL
Trigger: CAGAGCCCAGATCTGGGGGCACCGGCAGAGCAGCGT...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCGTGCTTGGCGAACGCTaGGCTGTGGGTGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAVLGER*AVGEAA
Trigger: CGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCAC...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGTGCTTGGCGAACGCTaGGCTGTGGGTGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRVLGER*AVGEAA
Trigger: CGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCAC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTTGGGTCCTCGGGCACTaGGACCTCGCTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLWVLGH*DLALLQ
Trigger: CTGCAGGAGAGCGAGGTCCCAGTGCCCGAGGACCCA...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGGCGAACGCTGCGCTGTaGGTGAAGCAGCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMEANAAL*VKQRPH
Trigger: GTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTCGC...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTGGCGTAGAGGAAGGCTaGGAGGTTCTGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLGVEEG*EVLPRL
Trigger: GAGCCTGGGCAGAACCTCTCAGCCTTCCTCTACGCC...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGACGCTGCTCTGCCGGTaGCCCCAGATCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMTLLCR*PQIWAL
Trigger: CAGAGCCCAGATCTGGGGGCACCGGCAGAGCAGCGT...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGTGTGGACGCTGCTCTaGCGGTGCCCCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDVWTLL*RCPQIW
Trigger: CCAGATCTGGGGGCACCGGCAGAGCAGCGTCCACAC...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGCGTGTCCTCTCAAGTaGTTGGCGAACGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRACPLK*LANAAL
Trigger: CAGCGCAGCGTTCGCCAAGCACTTGAGAGGACACGC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGCTCCTCGCCACTTTCTaGCCGTTGGCCCCGCACCCA +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMELLATF*PLAPHP
Trigger: TGGGTGCGGGGCCAACGGCCAGAAAGTGGCGAGGAG...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCTCCTCGCCACTTTCTaGCCGTTGGCCCCGCACCCA +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMLLATF*PLAPHP
Trigger: TGGGTGCGGGGCCAACGGCCAGAAAGTGGCGAGGAG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCAGGCTCTTGGATATCTaGGACCCAAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPRLLDI*DPRLFL
Trigger: GAGGAAGAGCCTTGGGTCCCAGATATCCAAGAGCCT...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGTCCTCTCAAGTGCTTaGCGAACGCTGCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRVLSSA*RTLRCG
Trigger: CCCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGAC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGACGCTGCGCTGTGGGTaGAGCAGCGCCCGCACTCGC +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMTLRCG*SSARTR
Trigger: GCGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGT...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGGGCGTAGAGGAAGGCTaGGAGGTTCTGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMGVEEG*EVLPRL
Trigger: GAGCCTGGGCAGAACCTCTCAGCCTTCCTCTACGCC...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCGTGCATGGTAAGAAGTaGATCAGACAGCGAGGGATC +
Preference number: 4 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPVHGKK*IRQRGI
Trigger: GATCCCTCGCTGTCTGATTCACTTCTTACCATGCAC...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGGGGAGGGAGCAGCTTaGCAAGGTCCACATGAAGCA +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRGEGAA*QGPHEA
Trigger: TGCTTCATGTGGACCTTGTCAAGCTGCTCCCTCCCC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACGGGGAGGGAGCAGCTTaGCAAGGTCCACATGAAGCA +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNGEGAA*QGPHEA
Trigger: TGCTTCATGTGGACCTTGTCAAGCTGCTCCCTCCCC...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCCACCTGATAACAATTTaGCGCTGGGGGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGHLITI*RWGREQ
Trigger: CTGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTG...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTGCTTCTGAGTGTAGCTaGCCTGGGTGTCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLASECS*PGCHGS
Trigger: GGAGCCGTGACACCCAGGGCAGCTACACTCAGAAGC...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACTTCTCTAGGGCTTGCTaGCTCCTGGTAGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNFSRAC*LLVAEA
Trigger: CGCTTCCGCTACCAGGAGGCAGCAAGCCCTAGAGAA...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGTGTGGACGCTGCTCTaGCGGTGCCCCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSVWTLL*RCPQIW
Trigger: CCAGATCTGGGGGCACCGGCAGAGCAGCGTCCACAC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGGGGACCTCGCTCTCCTaGAGGGTCTGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMGTSLS*RVWSSS
Trigger: AGAGGAGCTCCAGACCCTGCAGGAGAGCGAGGTCCC...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGCGTGCGTCTTCCGGTaGGCCAGGTACCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSACVFR*ARYRLC
Trigger: ACACAGGCGGTACCTGGCGCACCGGAAGACGCACGC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTAGTTCCTCAGCAGCGTaGGTCTTCCGGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSSSSAA*VFRCAR
Trigger: CCTGGCGCACCGGAAGACGCACGCTGCTGAGGAACT...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGCGTGTCCTCTCAAGTaGTTGGCGAACGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGACPLK*LANAAL
Trigger: CAGCGCAGCGTTCGCCAAGCACTTGAGAGGACACGC...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTCCCCACGGGGCAGCTTaGAAGAGAAGCTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFPHGAA*KRSWEG
Trigger: TCCCTCCCAGCTTCTCTTCCAAGCTGCCCCGTGGGG...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCAAGCGTCGGAAGTTCTaGTGGGAGGTTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGKRRKF*WEVSST
Trigger: GGTGCTGGAAACCTCCCACCAGAACTTCCGACGCTT...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCTCCTCTTCCTGGTGTaGACGCTGCTCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMLLFLV*TLLCRC
Trigger: GCACCGGCAGAGCAGCGTCCACACCAGGAAGAGGAG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACGTCCTCTCAAGTGCTTaGCGAACGCTGCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDVLSSA*RTLRCG
Trigger: CCCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGAC...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACAGGACTTCCTGGCCGTaGACATGGACAGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDRTSWP*TWTVTH
Trigger: GTGGGTGACTGTCCATGTTCACGGCCAGGAAGTCCT...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCAAGAGCAACCATCTCTaGGTCTCCAGAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGKSNHL*VSRAPL
Trigger: GAGAGGAGCTCTGGAGACTCAGAGATGGTTGCTCTT...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGTCGGCAGGGCCTCACTaGGGCGTGTCCTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHESAGPH*GVSSQV
Trigger: CACTTGAGAGGACACGCCTCAGTGAGGCCCTGCCGA...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGGTGTTCTCTGATGCCTaGCGAGGTGGTCCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMVFSDA*RGGPCD
Trigger: GTCGCAGGGACCACCTCGTCAGGCATCAGAGAACAC...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGGTGTTCTCTGATGCCTaGCGAGGTGGTCCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMEVFSDA*RGGPCD
Trigger: GTCGCAGGGACCACCTCGTCAGGCATCAGAGAACAC...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCCCCTTAGGTGAGGGCTaGAAGCAGATCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGPLGEG*KQISSH
Trigger: ATGTGAGGAGATCTGCTTTCAGCCCTCACCTAAGGG...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTTTCTCTAGGGCTTGCTaGCTCCTGGTAGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLFSRAC*LLVAEA
Trigger: CGCTTCCGCTACCAGGAGGCAGCAAGCCCTAGAGAA...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCTCCACCAGCGTCACTaGCTCCTCGCCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMLHQRH*LLATFW
Trigger: CCAGAAAGTGGCGAGGAGGCAGTGACGCTGGTGGAG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGCTCCACCAGCGTCACTaGCTCCTCGCCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMELHQRH*LLATFW
Trigger: CCAGAAAGTGGCGAGGAGGCAGTGACGCTGGTGGAG...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGTTTCCTCAGGAGACTaGTCGGGGGTCGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGVSSGD*SGVELC
Trigger: GCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAAC...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGGGACCTCGCTCTCCTaGAGGGTCTGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSGTSLS*RVWSSS
Trigger: AGAGGAGCTCCAGACCCTGCAGGAGAGCGAGGTCCC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACTCCAGAGCTCCTCTCTaGAGGAAGGTCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDSRAPL*RKVWVL
Trigger: GAGGACCCAGACCTTCCTGCAGAGAGGAGCTCTGGA...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTTCCAGAGCTCCTCTCTaGAGGAAGGTCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLSRAPL*RKVWVL
Trigger: GAGGACCCAGACCTTCCTGCAGAGAGGAGCTCTGGA...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCGAAGTCCAGCGGAAGTaGTTTCCGCAATCATCACAT +
Preference number: 4 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPEVQRK*FPQSSH
Trigger: ATGTGATGATTGCGGAAAGCACTTCCGCTGGACTTC...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCGGTGCCCCCAGATCTaGGCTCTGTGTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMRCPQI*ALCGFL
Trigger: GAGGAAACCACACAGAGCCCAGATCTGGGGGCACCG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGCGAACGCTGCGCTGTaGGTGAAGCAGCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCANAAL*VKQRPH
Trigger: GTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTCGC...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGGCGAACGCTGCGCTGTaGGTGAAGCAGCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMANAAL*VKQRPH
Trigger: GTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTCGC...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGCCTGTGCTCCACTTATaGAGGACGTCTCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRPVLHL*RTSPQF
Trigger: GAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGG...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCAAGAGCAACCATCTCTaGGTCTCCAGAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAKSNHL*VSRAPL
Trigger: GAGAGGAGCTCTGGAGACTCAGAGATGGTTGCTCTT...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACATACGGCCACATCCTTaGACGTTACCAGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNIRPHP*TLPVPV
Trigger: CACAGGGACTGGTAACGTTCAAGGATGTGGCCGTAT...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACCACACAGAACAGTCATaGTGCCTCCCTAACAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDHTEQS*CLPNRG
Trigger: CCCCCTGTTAGGGAGGCATCATGACTGTTCTGTGTG...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGGCGCGTTCATCTTGTaGACCTTTTGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGGAFIL*TFWCLA
Trigger: TGCCAGGCACCAAAAGGTTCACAAGATGAACGCGCC...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTACCGCCTGTGTTCACTaGAGTCCTCACCACACTCTC +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLTACVH*SPHHTL
Trigger: GAGAGTGTGGTGAGGACTTCAGTGAACACAGGCGGT...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTCCAGTGTGTGTTCTCTaGTGCCTGACGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSPVCVL*CLTRWS
Trigger: GGACCACCTCGTCAGGCATCAGAGAACACACACTGG...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGCCCTTAGGTGAGGGCTaGAAGCAGATCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRPLGEG*KQISSH
Trigger: ATGTGAGGAGATCTGCTTTCAGCCCTCACCTAAGGG...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACGCCATTTACTCCTGGTaGATTCCTCAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDAIYSW*IPQGPR
Trigger: CCTGGGACCCTGAGGAATTCACCAGGAGTAAATGGC...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGTCGGGGGTCGAGCTTTaGACAGGATCCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMESGVEL*TGSCSS
Trigger: TGAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGA...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGACGCTGCTCTGCCGGTaGCCCCAGATCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMTLLCR*PQIWAL
Trigger: CAGAGCCCAGATCTGGGGGCACCGGCAGAGCAGCGT...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGTGTGGACGCTGCTCTaGCGGTGCCCCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCVWTLL*RCPQIW
Trigger: CCAGATCTGGGGGCACCGGCAGAGCAGCGTCCACAC...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTTCCTGGTGTGGACGCTaGTCTGCCGGTGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCSWCGR*SAGAPR
Trigger: TCTGGGGGCACCGGCAGAGCAGCGTCCACACCAGGA...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCAAGATCCTGGTCCTCTaGTTCCACGGCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAKILVL*FHGCSH
Trigger: ATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTT...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACTCTTCCCAAAGATCCTaGTCCTCTGGTTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNSSQRS*SSGSTA
Trigger: AGCCGTGGAACCAGAGGACCAGGATCTTTGGGAAGA...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATCTCTCCTGCAGGGTCTaGAGCTCCTCTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDLSCRV*SSSSWC
Trigger: ACACCAGGAAGAGGAGCTCCAGACCCTGCAGGAGAG...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCTCCCTAACAGGGGGTaGACGGGTGTAGTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMLPNRG*TGVVSR
Trigger: TCGGGAAACTACACCCGTCCACCCCCTGTTAGGGAG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTCCTGTGCTCCACTTATaGAGGACGTCTCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLPVLHL*RTSPQF
Trigger: GAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGG...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CAA 72 bp CCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTaGCCACTCCCACAATCAGAGAAGGTGAGGTTCATA +
Preference number: 4 (lower is better)
Translates to: PVLHLWRTSPQF*PLPQSEKVRFI
Trigger: TATGAACCTCACCTTCTCTGATTGTGGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGGGCGCGTTCATCTTGTaGACCTTTTGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMEGAFIL*TFWCLA
Trigger: TGCCAGGCACCAAAAGGTTCACAAGATGAACGCGCC...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACATAGGGTTTCTCCACTaGTGGAGTTCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNIGFLH*WSSLSL
Trigger: CAGGCTGAGAGAACTCCATCAGTGGAGAAACCCTAT...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACATGTCTGACAAGGTCTaGAGTCCAGCGGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNMSDKV*SPAEVL
Trigger: AAGCACTTCCGCTGGACTTCAGACCTTGTCAGACAT...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCTCGGCAGGGCCTCACTaGGGCGTGTCCTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRISAGPH*GVSSQV
Trigger: CACTTGAGAGGACACGCCTCAGTGAGGCCCTGCCGA...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATCTCACCTCCCTTAGGTaGGGGCTGAAAGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDLTSLR*GLKADL
Trigger: GAGATCTGCTTTCAGCCCTCACCTAAGGGAGGTGAG...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCGTGTCAGAACAGTCTTaGTGGTCTTGCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAVSEQS*WSCQQQ
Trigger: CTGTTGCTGGCAAGACCATCAAGACTGTTCTGACAC...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTCTCCTGGGTTGTTTCTaGAAACCCTCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFLLGCF*KPSTSV
Trigger: GACGCTGGTGGAGGGTTTGCAGAAACAACCCAGGAG...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCTCGGGGGTCGAGCTTTaGACAGGATCCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSSGVEL*TGSCSS
Trigger: TGAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGA...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCTCCAGAGCTCCTCTCTaGAGGAAGGTCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSSRAPL*RKVWVL
Trigger: GAGGACCCAGACCTTCCTGCAGAGAGGAGCTCTGGA...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGGCGTGCGTCTTCCGGTaGGCCAGGTACCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGACVFR*ARYRLC
Trigger: ACACAGGCGGTACCTGGCGCACCGGAAGACGCACGC...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGAGCGCCCGCACTCGCTaGAGAGGTAGAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKSARTR*RGRVPQ
Trigger: CTGAGGAACTCTACCTCTGCAGCGAGTGCGGGCGCT...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGCGTCGGAAGTTCTGGTaGGAGGTTTCCAGCACCGGG +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKRRKFW*EVSSTG
Trigger: CCCGGTGCTGGAAACCTCCCACCAGAACTTCCGACG...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCCCACTTTCTGGCCGTTaGCCCCGCACCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIPLSGR*PRTQLC
Trigger: ACAGAGCTGGGTGCGGGGCCAACGGCCAGAAAGTGG...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCCACTTTCTGGCCGTTaGCCCCGCACCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMPLSGR*PRTQLC
Trigger: ACAGAGCTGGGTGCGGGGCCAACGGCCAGAAAGTGG...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCCTCCTCTTCCTGGTGTaGACGCTGCTCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRILLFLV*TLLCRC
Trigger: GCACCGGCAGAGCAGCGTCCACACCAGGAAGAGGAG...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCTCCAGATCACTCCACTaGTCCTGGGAAAAGCATACG +
Preference number: 4 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLASRSLH*SWEKHT
Trigger: CGTATGCTTTTCCCAGGACCAGTGGAGTGATCTGGA...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCGAACTCTTTCTGTGTTaGGTCCAGATCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGELFLC*VQITPL
Trigger: CAGTGGAGTGATCTGGACCCAACACAGAAAGAGTTC...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCTCTTCCTCTCTAACCTaGGAGATCTCATCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGSSSLT*EISSGL
Trigger: CAGACCTGATGAGATCTCCCAGGTTAGAGAGGAAGA...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATCGTTACCAGTCCCTGTaGCAGAGCAGTAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDRYQSL*QSSKKS
Trigger: GCTCTTCTTACTGCTCTGTCACAGGGACTGGTAACG...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTCGTTACCAGTCCCTGTaGCAGAGCAGTAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFRYQSL*QSSKKS
Trigger: GCTCTTCTTACTGCTCTGTCACAGGGACTGGTAACG...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACGTGCCTGGCAAGATGTaGGCTTCGTGTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNVPGKM*ASCVTF
Trigger: AAAAGTTACACACGAAGCTCACATCTTGCCAGGCAC...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGATGTCTGACAAGGTCTaGAGTCCAGCGGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGMSDKV*SPAEVL
Trigger: AAGCACTTCCGCTGGACTTCAGACCTTGTCAGACAT...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCACCGCCTGTGTTCACTaGAGTCCTCACCACACTCTC +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSTACVH*SPHHTL
Trigger: GAGAGTGTGGTGAGGACTTCAGTGAACACAGGCGGT...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMAGALQ*RRSLNS
Trigger: TGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGC...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTGCAAACCTCCTGTCTTaGGTCCAGAGCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSANLLS*VQSCVL
Trigger: AAGCACACAGCTCTGGACTCAAGACAGGAGGTTTGC...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTGTGCATGGTAAGAAGTaGATCAGACAGCGAGGGATC +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLVHGKK*IRQRGI
Trigger: GATCCCTCGCTGTCTGATTCACTTCTTACCATGCAC...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGTGTCAGAACAGTCTTaGTGGTCTTGCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGVSEQS*WSCQQQ
Trigger: CTGTTGCTGGCAAGACCATCAAGACTGTTCTGACAC...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGCCATTTACTCCTGGTaGATTCCTCAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSAIYSW*IPQGPR
Trigger: CCTGGGACCCTGAGGAATTCACCAGGAGTAAATGGC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCTCCACCAGCGTCACTaGCTCCTCGCCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMLHQRH*LLATFW
Trigger: CCAGAAAGTGGCGAGGAGGCAGTGACGCTGGTGGAG...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGGTTTCCTCAGGAGACTaGTCGGGGGTCGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKVSSGD*SGVELC
Trigger: GCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAAC...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAAAGTTCCTCAGCAGCGTaGGTCTTCCGGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTESSSAA*VFRCAR
Trigger: CCTGGCGCACCGGAAGACGCACGCTGCTGAGGAACT...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGGCGTGTCCTCTCAAGTaGTTGGCGAACGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMACPLK*LANAAL
Trigger: CAGCGCAGCGTTCGCCAAGCACTTGAGAGGACACGC...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGACTCTCCCTGTCATaGTTTAACCCCATACCCTGT +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNRLSLS*FNPIPC
Trigger: ACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCT...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTCCCCACGGGGCAGCTTaGAAGAGAAGCTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECPHGAA*KRSWEG
Trigger: TCCCTCCCAGCTTCTCTTCCAAGCTGCCCCGTGGGG...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGCTGTAGCCATTTCTTaGCTTTGGGGTGGTCTCACA +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGAVAIS*LWGGLT
Trigger: TGTGAGACCACCCCAAAGCCAAGAAATGGCTACAGC...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTAAGATCCTGGTCCTCTaGTTCCACGGCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFKILVL*FHGCSH
Trigger: ATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTT...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTCGTCGGAAGTTCTGGTaGGAGGTTTCCAGCACCGGG +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCRRKFW*EVSSTG
Trigger: CCCGGTGCTGGAAACCTCCCACCAGAACTTCCGACG...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCAAGCGTCGGAAGTTCTaGTGGGAGGTTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSKRRKF*WEVSST
Trigger: GGTGCTGGAAACCTCCCACCAGAACTTCCGACGCTT...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCCGGTGCCCCCAGATCTaGGCTCTGTGTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIRCPQI*ALCGFL
Trigger: GAGGAAACCACACAGAGCCCAGATCTGGGGGCACCG...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACGAACTCTTTCTGTGTTaGGTCCAGATCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNELFLC*VQITPL
Trigger: CAGTGGAGTGATCTGGACCCAACACAGAAAGAGTTC...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCGTCCTCTCAAGTGCTTaGCGAACGCTGCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIVLSSA*RTLRCG
Trigger: CCCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGAC...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCTGCAAACTCCAGGCTTaGATCTTATCTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGCKLQA*ILSQSA
Trigger: TGCACTCTGAGATAAGATCCAAGCCTGGAGTTTGCA...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530393.6
3UTR CAA 72 bp TGTGTGGCAAAGCCATCAGGACGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCC +
Preference number: 4 (lower is better)
Translates to: CVAKPSGRKPPV*SPELCALRFDP
Trigger: GGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCGTCCTGATGGCTTTGCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACTCTGGGGATTGGAAATaGCAGAGAGACAACAATTCC +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNSGDWK*QRDNNS
Trigger: GGAATTGTTGTCTCTCTGTCATTTCCAATCCCCAGA...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGGGTGGGAGTTACAAGTaGAGCTCTTTCCACACACAG +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMGGSYK*SSFHTQ
Trigger: CTGTGTGTGGAAAGAGCTTCACTTGTAACTCCCACC...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTCCAGTGTGTGTTCTCTaGTGCCTGACGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCPVCVL*CLTRWS
Trigger: GGACCACCTCGTCAGGCATCAGAGAACACACACTGG...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCCTCACCTCCCTTAGGTaGGGGCTGAAAGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLLTSLR*GLKADL
Trigger: GAGATCTGCTTTCAGCCCTCACCTAAGGGAGGTGAG...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSAGALQ*RRSLNS
Trigger: TGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCCTACTTTATACCCATaGGGTAGAGGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMPTLYP*GRGRCT
Trigger: AGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGTATGCAGTTATCCTGTaGATGTGTGGCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRYAVIL*MCGKAI
Trigger: GATGGCTTTGCCACACATTCACAGGATAACTGCATA...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATCACATGAAGCAGCCTTaGGATTTTTCGCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDHMKQP*DFSPTS
Trigger: GGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTG...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCACATGAAGCAGCCTTaGGATTTTTCGCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMHMKQP*DFSPTS
Trigger: GGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACGTGGGCTTGTGCATATaGGGGAATGTGAACGATTTC +
Preference number: 4 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDVGLCI*GNVNDF
Trigger: GAAATCGTTCACATTCCCTCATATGCACAAGCCCAC...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGTTCAACACTTTCCGTaGTGTCAGAGTACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRVQHFP*CQSTQS
Trigger: TGACTGAGTACTCTGACATCACGGAAAGTGTTGAAC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCGCCATTTACTCCTGGTaGATTCCTCAGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLAIYSW*IPQGPR
Trigger: CCTGGGACCCTGAGGAATTCACCAGGAGTAAATGGC...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCAACAACACAAATACATaGAAGCCATTTACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPNNTNT*KPFTPG
Trigger: ACCAGGAGTAAATGGCTTTCATGTATTTGTGTTGTT...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGTATCATCGACCAAAATaGGAATTTCCCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRYHRPK*EFPCWA
Trigger: GGCCCAACAGGGAAATTCTCATTTTGGTCGATGATA...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACCAGAAGGACAACGGTTaGCTGGTATTAAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNQKDNG*LVLRPN
Trigger: GTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTG...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGGCTTCTGAGTGTAGCTaGCCTGGGTGTCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMASECS*PGCHGS
Trigger: GGAGCCGTGACACCCAGGGCAGCTACACTCAGAAGC...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCTCGGGGGTCGAGCTTTaGACAGGATCCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRISGVEL*TGSCSS
Trigger: TGAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGA...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAAACTCAGATCTTCCTaGTCCAGACACTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNKLRSS*SRHSSS
Trigger: TGAGGAAGAGTGTCTGGAGCAGGAAGATCTGAGTTT...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTAGCGCCCGCACTCGCTaGAGAGGTAGAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECSARTR*RGRVPQ
Trigger: CTGAGGAACTCTACCTCTGCAGCGAGTGCGGGCGCT...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAGGCTGAGAGGTTCTaGCCAGGCTCGTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMKAERF*PGSCLV
Trigger: AACTAAACACGAGCCTGGGCAGAACCTCTCAGCCTT...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTGCTGTAGCCATTTCTTaGCTTTGGGGTGGTCTCACA +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSAVAIS*LWGGLT
Trigger: TGTGAGACCACCCCAAAGCCAAGAAATGGCTACAGC...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGCGGTGCCCCCAGATCTaGGCTCTGTGTGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMRCPQI*ALCGFL
Trigger: GAGGAAACCACACAGAGCCCAGATCTGGGGGCACCG...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCACTCCTCTTCCTGGTGTaGACGCTGCTCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSLLFLV*TLLCRC
Trigger: GCACCGGCAGAGCAGCGTCCACACCAGGAAGAGGAG...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCCTCTCCTGCAGGGTCTaGAGCTCCTCTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRILSCRV*SSSSWC
Trigger: ACACCAGGAAGAGGAGCTCCAGACCCTGCAGGAGAG...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTTCCAGATCACTCCACTaGTCCTGGGAAAAGCATACG +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSSRSLH*SWEKHT
Trigger: CGTATGCTTTTCCCAGGACCAGTGGAGTGATCTGGA...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGGAACCTTTTGGTGCCTaGCAAGATGTGAGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMEPFGA*QDVSFV
Trigger: CACGAAGCTCACATCTTGCCAGGCACCAAAAGGTTC...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGGCCCTGGAAAAGGAATaGGTAAGATGGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMEALEKE*VRWEVP
Trigger: TGGGACTTCCCATCTTACCCATTCCTTTTCCAGGGC...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGACTCTGGCCGACAGGTaGAATCATCTTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMTLADR*NHLPVS
Trigger: TGAAACTGGAAGATGATTTCACCTGTCGGCCAGAGT...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCAAGAGCAACCATCTCTaGGTCTCCAGAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLKSNHL*VSRAPL
Trigger: GAGAGGAGCTCTGGAGACTCAGAGATGGTTGCTCTT...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCACCGCCTGTGTTCACTaGAGTCCTCACCACACTCTC +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRITACVH*SPHHTL
Trigger: GAGAGTGTGGTGAGGACTTCAGTGAACACAGGCGGT...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTCCAGTGTGTGTTCTCTaGTGCCTGACGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIPVCVL*CLTRWS
Trigger: GGACCACCTCGTCAGGCATCAGAGAACACACACTGG...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGCTAGGAGGTCTTTTCTaGGTGGGTCCTCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKLGGLF*VGPLMP
Trigger: AGGCATCAGAGGACCCACTCAGAAAAGACCTCCTAG...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCGCAGGTGCACTCCAGTaGAGGAGAAGCCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLAGALQ*RRSLNS
Trigger: TGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGC...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTTTCTCTAGGGCTTGCTaGCTCCTGGTAGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIFSRAC*LLVAEA
Trigger: CGCTTCCGCTACCAGGAGGCAGCAAGCCCTAGAGAA...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCTCCTGGGTTGTTTCTaGAAACCCTCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALLLGCF*KPSTSV
Trigger: GACGCTGGTGGAGGGTTTGCAGAAACAACCCAGGAG...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCTCCTGGGTTGTTTCTaGAAACCCTCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMLLGCF*KPSTSV
Trigger: GACGCTGGTGGAGGGTTTGCAGAAACAACCCAGGAG...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATCTTTGCACAGGATCCTaGAGCTCATTAGGTGACTCA +
Preference number: 4 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDLCTGS*SSLGDS
Trigger: TGAGTCACCTAATGAGCTGCAGGATCCTGTGCAAAG...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGGTTTCCTCAGGAGACTaGTCGGGGGTCGAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMVSSGD*SGVELC
Trigger: GCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAAC...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGCACACAAGTAGGGTTTaGCTCCCAGGTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMEHTSRV*LPGGFF
Trigger: AAAGAATCCACCTGGGAGGCAAACCCTACTTGTGTG...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGCACACAAGTAGGGTTTaGCTCCCAGGTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMHTSRV*LPGGFF
Trigger: AAAGAATCCACCTGGGAGGCAAACCCTACTTGTGTG...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCGTGCTTGGCGAACGCTaGGCTGTGGGTGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVVLGER*AVGEAA
Trigger: CGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCAC...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTACAGCGAGGGATCTATaGAGTTATCCTGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLTARDL*SYPVNV
Trigger: CACATTCACAGGATAACTGCATAGATCCCTCGCTGT...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACACAGCGAGGGATCTATaGAGTTATCCTGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDTARDL*SYPVNV
Trigger: CACATTCACAGGATAACTGCATAGATCCCTCGCTGT...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTCTCTCCTGCAGGGTCTaGAGCTCCTCTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRILSCRV*SSSSWC
Trigger: ACACCAGGAAGAGGAGCTCCAGACCCTGCAGGAGAG...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCTCCAGATCACTCCACTaGTCCTGGGAAAAGCATACG +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSSRSLH*SWEKHT
Trigger: CGTATGCTTTTCCCAGGACCAGTGGAGTGATCTGGA...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGAGGCTCTTGGATATCTaGGACCCAAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKRLLDI*DPRLFL
Trigger: GAGGAAGAGCCTTGGGTCCCAGATATCCAAGAGCCT...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAACTCCCTAACAGGGGGTaGACGGGTGTAGTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTELPNRG*TGVVSR
Trigger: TCGGGAAACTACACCCGTCCACCCCCTGTTAGGGAG...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTCTCCCTAACAGGGGGTaGACGGGTGTAGTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRILPNRG*TGVVSR
Trigger: TCGGGAAACTACACCCGTCCACCCCCTGTTAGGGAG...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGATGCAACCAAGAGACTaGTTGAATAACGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRMQPRD*LNNGKV
Trigger: AACCTTCCCGTTATTCAACCAGTCTCTTGGTTGCAT...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCATGCAACCAAGAGACTaGTTGAATAACGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAMQPRD*LNNGKV
Trigger: AACCTTCCCGTTATTCAACCAGTCTCTTGGTTGCAT...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGCAAGGAACCTTTAACTaGCAACAGAGATTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGQGTFN*QQRLLG
Trigger: GCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTG...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCGTTACCAGTCCCTGTaGCAGAGCAGTAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALRYQSL*QSSKKS
Trigger: GCTCTTCTTACTGCTCTGTCACAGGGACTGGTAACG...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGGCGCGTTCATCTTGTaGACCTTTTGGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECGAFIL*TFWCLA
Trigger: TGCCAGGCACCAAAAGGTTCACAAGATGAACGCGCC...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCATAGGGTTTCTCCACTaGTGGAGTTCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLIGFLH*WSSLSL
Trigger: CAGGCTGAGAGAACTCCATCAGTGGAGAAACCCTAT...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAACTCACCTCCCTTAGGTaGGGGCTGAAAGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTELTSLR*GLKADL
Trigger: GAGATCTGCTTTCAGCCCTCACCTAAGGGAGGTGAG...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTTATGCAGTTATCCTGTaGATGTGTGGCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSYAVIL*MCGKAI
Trigger: GATGGCTTTGCCACACATTCACAGGATAACTGCATA...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGTTGACAAGGTCCACATaGAGCAGCCTTGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGLTRST*SSLEIF
Trigger: AAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAA...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGCACCTGATAACAATTTaGCGCTGGGGGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMHLITI*RWGREQ
Trigger: CTGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTG...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGTGGGCTTGTGCATATaGGGGAATGTGAACGATTTC +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSVGLCI*GNVNDF
Trigger: GAAATCGTTCACATTCCCTCATATGCACAAGCCCAC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCGTGTCAGAACAGTCTTaGTGGTCTTGCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLVSEQS*WSCQQQ
Trigger: CTGTTGCTGGCAAGACCATCAAGACTGTTCTGACAC...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTGTTCAACACTTTCCGTaGTGTCAGAGTACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSVQHFP*CQSTQS
Trigger: TGACTGAGTACTCTGACATCACGGAAAGTGTTGAAC...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGAGACTCTCCCTGTCATaGTTTAACCCCATACCCTGT +
Preference number: 4 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHERLSLS*FNPIPC
Trigger: ACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCT...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGTCTGAAGTAGCTTCCTaGATCAAGCCCCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGSEVAS*IKPHGA
Trigger: TGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGA...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAATCTGAAGTAGCTTCCTaGATCAAGCCCCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTESEVAS*IKPHGA
Trigger: TGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGA...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGTCTTCCCAAAGATCCTaGTCCTCTGGTTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMSSQRS*SSGSTA
Trigger: AGCCGTGGAACCAGAGGACCAGGATCTTTGGGAAGA...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCTCTTCCCAAAGATCCTaGTCCTCTGGTTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRISSQRS*SSGSTA
Trigger: AGCCGTGGAACCAGAGGACCAGGATCTTTGGGAAGA...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTAAGCGTCGGAAGTTCTaGTGGGAGGTTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECKRRKF*WEVSST
Trigger: GGTGCTGGAAACCTCCCACCAGAACTTCCGACGCTT...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATATGGGTCCTCGGGCACTaGGACCTCGCTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIWVLGH*DLALLQ
Trigger: CTGCAGGAGAGCGAGGTCCCAGTGCCCGAGGACCCA...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGTCACTCCACTGGTCCTaGGAAAAGCATACGGCCACA +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMSLHWS*EKHTAT
Trigger: TGTGGCCGTATGCTTTTCCCAGGACCAGTGGAGTGA...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCTCACTCCACTGGTCCTaGGAAAAGCATACGGCCACA +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRISLHWS*EKHTAT
Trigger: TGTGGCCGTATGCTTTTCCCAGGACCAGTGGAGTGA...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGTCTTCCTCTCTAACCTaGGAGATCTCATCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHESSSLT*EISSGL
Trigger: CAGACCTGATGAGATCTCCCAGGTTAGAGAGGAAGA...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCAGGCTCTTGGATATCTaGGACCCAAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALRLLDI*DPRLFL
Trigger: GAGGAAGAGCCTTGGGTCCCAGATATCCAAGAGCCT...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTAAAACTCAGGATTTCTaGCTCTTGAGTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFKTQDF*LLSLLR
Trigger: CCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTT...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATAGTCTGGTGAATTTCTaGTTCTCCCAAAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDSLVNF*FSQNRP
Trigger: AGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACT...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAGTCTGGTGAATTTCTaGTTCTCCCAAAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMSLVNF*FSQNRP
Trigger: AGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACT...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCGAACCTTTTGGTGCCTaGCAAGATGTGAGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLEPFGA*QDVSFV
Trigger: CACGAAGCTCACATCTTGCCAGGCACCAAAAGGTTC...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGTTAACACAGATTTCTaGCTGAAGCTTTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRVNTDF*LKLLPQ
Trigger: TTGTGGCAAAAGCTTCAGCCAGAAATCTGTGTTAAC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGTATCCTGTGAATGTGTaGCAAAGCCATCAGGACGCA +
Preference number: 4 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHEYPVNV*QSHQDA
Trigger: TGCGTCCTGATGGCTTTGCCACACATTCACAGGATA...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGAAGGAATGGGTAAGATaGGAAGTCCCAGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHEKEWVR*EVPETR
Trigger: CCTGGTTTCTGGGACTTCCCATCTTACCCATTCCTT...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCATCCCACAACCTTTCTaGAGTAGCTTCCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSIPQPF*SSFLDQ
Trigger: TTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGAT...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336139.8
CDS-3UTR TCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTATACGGCCACATCCTTaGACGTTACCAGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECIRPHP*TLPVPV
Trigger: CACAGGGACTGGTAACGTTCAAGGATGTGGCCGTAT...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATACGGCCACATCCTTaGACGTTACCAGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIIRPHP*TLPVPV
Trigger: CACAGGGACTGGTAACGTTCAAGGATGTGGCCGTAT...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGGGTGGGAGTTACAAGTaGAGCTCTTTCCACACACAG +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMGGSYK*SSFHTQ
Trigger: CTGTGTGTGGAAAGAGCTTCACTTGTAACTCCCACC...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCGGTGGGAGTTACAAGTaGAGCTCTTTCCACACACAG +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIGGSYK*SSFHTQ
Trigger: CTGTGTGTGGAAAGAGCTTCACTTGTAACTCCCACC...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTCTAGGAGGTCTTTTCTaGGTGGGTCCTCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECLGGLF*VGPLMP
Trigger: AGGCATCAGAGGACCCACTCAGAAAAGACCTCCTAG...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGCTAGGAGGTCTTTTCTaGGTGGGTCCTCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMLGGLF*VGPLMP
Trigger: AGGCATCAGAGGACCCACTCAGAAAAGACCTCCTAG...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTCCCTTAGGTGAGGGCTaGAAGCAGATCTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECPLGEG*KQISSH
Trigger: ATGTGAGGAGATCTGCTTTCAGCCCTCACCTAAGGG...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCCTACTTTATACCCATaGGGTAGAGGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALPTLYP*GRGRCT
Trigger: AGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGG...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGGCAAACCTCCTGTCTTaGGTCCAGAGCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGANLLS*VQSCVL
Trigger: AAGCACACAGCTCTGGACTCAAGACAGGAGGTTTGC...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAGTGCCTTTGTAAGTTaGCAGTTTCCAAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMSAFVS*QFPNPL
Trigger: AAGGGGATTTGGAAACTGTCAACTTACAAAGGCACT...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAACAACACAAATACATaGAAGCCATTTACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNNNTNT*KPFTPG
Trigger: ACCAGGAGTAAATGGCTTTCATGTATTTGTGTTGTT...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCACAGCGAGGGATCTATaGAGTTATCCTGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSTARDL*SYPVNV
Trigger: CACATTCACAGGATAACTGCATAGATCCCTCGCTGT...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTAAGATCCTGGTCCTCTaGTTCCACGGCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIKILVL*FHGCSH
Trigger: ATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTT...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGTCACTCCACTGGTCCTaGGAAAAGCATACGGCCACA +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMSLHWS*EKHTAT
Trigger: TGTGGCCGTATGCTTTTCCCAGGACCAGTGGAGTGA...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTGACTATTTCCCAATCTaGAGTCTGGTGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSDYFPI*SLVNFW
Trigger: CCAGAAATTCACCAGACTCCAGATTGGGAAATAGTC...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCCAAGGAACCTTTAACTaGCAACAGAGATTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSQGTFN*QQRLLG
Trigger: GCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTG...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCACTCTGGCCGACAGGTaGAATCATCTTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRITLADR*NHLPVS
Trigger: TGAAACTGGAAGATGATTTCACCTGTCGGCCAGAGT...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGACTCTGGCCGACAGGTaGAATCATCTTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMTLADR*NHLPVS
Trigger: TGAAACTGGAAGATGATTTCACCTGTCGGCCAGAGT...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCGTGCCTGGCAAGATGTaGGCTTCGTGTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIVPGKM*ASCVTF
Trigger: AAAAGTTACACACGAAGCTCACATCTTGCCAGGCAC...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGATAGGGTTTCTCCACTaGTGGAGTTCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGIGFLH*WSSLSL
Trigger: CAGGCTGAGAGAACTCCATCAGTGGAGAAACCCTAT...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGCATGGTAAGAAGTaGATCAGACAGCGAGGGATC +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECVHGKK*IRQRGI
Trigger: GATCCCTCGCTGTCTGATTCACTTCTTACCATGCAC...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAACACATGAAGCAGCCTTaGGATTTTTCGCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEHMKQP*DFSPTS
Trigger: GGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTG...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGGTTCAACACTTTCCGTaGTGTCAGAGTACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKVQHFP*CQSTQS
Trigger: TGACTGAGTACTCTGACATCACGGAAAGTGTTGAAC...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGTATCATCGACCAAAATaGGAATTTCCCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKYHRPK*EFPCWA
Trigger: GGCCCAACAGGGAAATTCTCATTTTGGTCGATGATA...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTCTTTGCACAGGATCCTaGAGCTCATTAGGTGACTCA +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCLCTGS*SSLGDS
Trigger: TGAGTCACCTAATGAGCTGCAGGATCCTGTGCAAAG...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGAAACTCAGATCTTCCTaGTCCAGACACTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKKLRSS*SRHSSS
Trigger: TGAGGAAGAGTGTCTGGAGCAGGAAGATCTGAGTTT...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAAGTCCAGCGGAAGTaGTTTCCGCAATCATCACAT +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCEVQRK*FPQSSH
Trigger: ATGTGATGATTGCGGAAAGCACTTCCGCTGGACTTC...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCCACACAAGTAGGGTTTaGCTCCCAGGTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIHTSRV*LPGGFF
Trigger: AAAGAATCCACCTGGGAGGCAAACCCTACTTGTGTG...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGAAGGCTGAGAGGTTCTaGCCAGGCTCGTGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGKAERF*PGSCLV
Trigger: AACTAAACACGAGCCTGGGCAGAACCTCTCAGCCTT...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTGCTGTAGCCATTTCTTaGCTTTGGGGTGGTCTCACA +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIAVAIS*LWGGLT
Trigger: TGTGAGACCACCCCAAAGCCAAGAAATGGCTACAGC...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATACGTCGGAAGTTCTGGTaGGAGGTTTCCAGCACCGGG +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIRRKFW*EVSSTG
Trigger: CCCGGTGCTGGAAACCTCCCACCAGAACTTCCGACG...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAACTCTTTCTGTGTTaGGTCCAGATCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCELFLC*VQITPL
Trigger: CAGTGGAGTGATCTGGACCCAACACAGAAAGAGTTC...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCAGATCTCATCAGGTCTaGGGATTGGAAATGACAGAG +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLRSHQV*GLEMTE
Trigger: CTCTGTCATTTCCAATCCCCAGACCTGATGAGATCT...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGAGGTGTCTAACAAGGTaGGAGTTACAAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKRCLTR*ELQVKL
Trigger: GAGCTTCACTTGTAACTCCCACCTTGTTAGACACCT...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGGAACCTTTTGGTGCCTaGCAAGATGTGAGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMEPFGA*QDVSFV
Trigger: CACGAAGCTCACATCTTGCCAGGCACCAAAAGGTTC...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGTTAACACAGATTTCTaGCTGAAGCTTTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFVNTDF*LKLLPQ
Trigger: TTGTGGCAAAAGCTTCAGCCAGAAATCTGTGTTAAC...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTAGAGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTATTCAGGTTGTACTTTaGATGAAACATCCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GRGRCTPVKEKPQFRLYFIQVVL*MKHPLK
Trigger: CTTGAGGGGATGTTTCATCCAAAGTACAACCTGAAT...AAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTTATCCTGTGAATGTGTaGCAAAGCCATCAGGACGCA +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCYPVNV*QSHQDA
Trigger: TGCGTCCTGATGGCTTTGCCACACATTCACAGGATA...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGGGCAACAGAGATTGTTaGGCCATCATGAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMGNRDC*AIMRCY
Trigger: GTAGCATCTCATGATGGCCCAACAATCTCTGTTGCC...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGCCCTGGAAAAGGAATaGGTAAGATGGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECALEKE*VRWEVP
Trigger: TGGGACTTCCCATCTTACCCATTCCTTTTCCAGGGC...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CAA 72 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATaGTTGGGCCATCATGAGATGCTACTTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PHLQGTFNWQQR*LGHHEMLLSSS
Trigger: AGAGCTAGAAAGTAGCATCTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTTCTGGGGATTGGAAATaGCAGAGAGACAACAATTCC +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCSGDWK*QRDNNS
Trigger: GGAATTGTTGTCTCTCTGTCATTTCCAATCCCCAGA...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGGTGCCTGGCAAGATGTaGGCTTCGTGTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGVPGKM*ASCVTF
Trigger: AAAAGTTACACACGAAGCTCACATCTTGCCAGGCAC...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTAGGTTGTACTTTGGATaGAACATCCCCTCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECRLYFG*NIPSRR
Trigger: ACGCCTTGAGGGGATGTTTCATCCAAAGTACAACCT...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGAGGTTGTACTTTGGATaGAACATCCCCTCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMRLYFG*NIPSRR
Trigger: ACGCCTTGAGGGGATGTTTCATCCAAAGTACAACCT...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCACCTACTTTATACCCATaGGGTAGAGGCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSPTLYP*GRGRCT
Trigger: AGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGG...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCTTGACAAGGTCCACATaGAGCAGCCTTGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLLTRST*SSLEIF
Trigger: AAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAA...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCAACCAAGAGACTGGTTaGATAACGGGAAGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSNQETG*ITGRLN
Trigger: ATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTT...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGGTGGGCTTGTGCATATaGGGGAATGTGAACGATTTC +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGVGLCI*GNVNDF
Trigger: GAAATCGTTCACATTCCCTCATATGCACAAGCCCAC...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCTTTGCACAGGATCCTaGAGCTCATTAGGTGACTCA +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGLCTGS*SSLGDS
Trigger: TGAGTCACCTAATGAGCTGCAGGATCCTGTGCAAAG...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGAAACTCAGATCTTCCTaGTCCAGACACTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMKLRSS*SRHSSS
Trigger: TGAGGAAGAGTGTCTGGAGCAGGAAGATCTGAGTTT...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCACCAGGGAACTTGGCTaGAAGTGTTACCTTTATTTA +
Preference number: 4 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSTRELG*KCYLYL
Trigger: TAAATAAAGGTAACACTTGCAGCCAAGTTCCCTGGT...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp CCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCATTAACCCAGGACAAGCTGTaGTTAGGCTTAGATACTTGG +
Preference number: 4 (lower is better)
Translates to: PVHQNIIDQNENFPVGPLTQDKL*LGLDTW
Trigger: CCAAGTATCTAAGCCTAAGCACAGCTTGTCCTGGGT...TAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS-3UTR CCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAGCCATTTCTTGGCTTTaGGGTGGTCTCACACCATCT +
Preference number: 4 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSAISWL*GGLTPS
Trigger: AGATGGTGTGAGACCACCCCAAAGCCAAGAAATGGC...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGAGATCTCATCAGGTCTaGGGATTGGAAATGACAGAG +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMRSHQV*GLEMTE
Trigger: CTCTGTCATTTCCAATCCCCAGACCTGATGAGATCT...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGTCTTCCTCTCTAACCTaGGAGATCTCATCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMSSSLT*EISSGL
Trigger: CAGACCTGATGAGATCTCCCAGGTTAGAGAGGAAGA...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCGACTATTTCCCAATCTaGAGTCTGGTGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLDYFPI*SLVNFW
Trigger: CCAGAAATTCACCAGACTCCAGATTGGGAAATAGTC...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCAGGTGTCTAACAAGGTaGGAGTTACAAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIRCLTR*ELQVKL
Trigger: GAGCTTCACTTGTAACTCCCACCTTGTTAGACACCT...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTTATCCTGTGAATGTGTaGCAAAGCCATCAGGACGCA +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIYPVNV*QSHQDA
Trigger: TGCGTCCTGATGGCTTTGCCACACATTCACAGGATA...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAAGGCAACAGAGATTGTTaGGCCATCATGAGATGCTAC +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEGNRDC*AIMRCY
Trigger: GTAGCATCTCATGATGGCCCAACAATCTCTGTTGCC...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGAAGGAATGGGTAAGATaGGAAGTCCCAGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMKEWVR*EVPETR
Trigger: CCTGGTTTCTGGGACTTCCCATCTTACCCATTCCTT...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CAA 72 bp CATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTaGGGCCATCATGAGATGCTACTTTCTAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: HLQGTFNWQQRL*GHHEMLLSSSM
Trigger: CATAGAGCTAGAAAGTAGCATCTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATACACACAGAACAGTCATaGTGCCTCCCTAACAGGGGG +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIHTEQS*CLPNRG
Trigger: CCCCCTGTTAGGGAGGCATCATGACTGTTCTGTGTG...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTTATGCAGTTATCCTGTaGATGTGTGGCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIYAVIL*MCGKAI
Trigger: GATGGCTTTGCCACACATTCACAGGATAACTGCATA...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCAACCAAGAGACTGGTTaGATAACGGGAAGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLNQETG*ITGRLN
Trigger: ATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTT...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCAGAAGGACAACGGTTaGCTGGTATTAAGACCAAAC +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGQKDNG*LVLRPN
Trigger: GTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTG...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGAGATCTCATCAGGTCTaGGGATTGGAAATGACAGAG +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMRSHQV*GLEMTE
Trigger: CTCTGTCATTTCCAATCCCCAGACCTGATGAGATCT...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCATTAAAAACTCAGGATTTCTaGCTCTTGAGTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PVHQNIIDQNENFPVGPLKTQDF*LLSLLR
Trigger: CCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTT...TAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTAAAACTCAGGATTTCTaGCTCTTGAGTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MVRSESDSEGSMQLSCECKTQDF*LLSLLR
Trigger: CCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTT...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGAGTCTGGTGAATTTCTaGTTCTCCCAAAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GGLVHMRECERFHYDRIMSLVNF*FSQNRP
Trigger: AGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACT...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGGACTATTTCCCAATCTaGAGTCTGGTGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMDYFPI*SLVNFW
Trigger: CCAGAAATTCACCAGACTCCAGATTGGGAAATAGTC...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCATTCAGGTTGTACTTTaGATGAAACATCCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLIQVVL*MKHPLK
Trigger: CTTGAGGGGATGTTTCATCCAAAGTACAACCTGAAT...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCAGAAACCAGGGAACTTaGCTGCAAGTGTTACCTTTA +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIRNQGT*LQVLPL
Trigger: TAAAGGTAACACTTGCAGCCAAGTTCCCTGGTTTCT...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTAGAAACCAGGGAACTTaGCTGCAAGTGTTACCTTTA +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCRNQGT*LQVLPL
Trigger: TAAAGGTAACACTTGCAGCCAAGTTCCCTGGTTTCT...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
3UTR CAA 72 bp TGCTTATTAGGACAGTATCTTCTGCAAACTCCAGGCTaGGATCTTATCTCAGAGTGCATATGTTTCACCGGA +
Preference number: 4 (lower is better)
Translates to: CLLGQYLLQTPG*DLISECICFTG
Trigger: TCCGGTGAAACATATGCACTCTGAGATAAGATCCAAGCCTGGAGTTTGCAGAAGATACTGTCCTAATAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS-3UTR TCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAGCAAACCTCCTGTCTTaGGTCCAGAGCTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIANLLS*VQSCVL
Trigger: AAGCACACAGCTCTGGACTCAAGACAGGAGGTTTGC...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ACCAAACCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGAGTGCCTTTGTAAGTTaGCAGTTTCCAAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: TKPVHQNIIDQNENFPVGSAFVS*QFPNPL
Trigger: AAGGGGATTTGGAAACTGTCAACTTACAAAGGCACT...CCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGGTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCGGCCCATGGCAATCATaGTTCTGTAATTGTTATAGT +
Preference number: 4 (lower is better)
Translates to: VLSPELCALRFDPSKDRIGPWQS*FCNCYS
Trigger: ACTATAACAATTACAGAATCATGATTGCCATGGGCC...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAACAATTTGCAATGGCTaGGTCCCTCACATTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSTICNG*VPHIVV
Trigger: TACCACAATGTGAGGGACTCAGCCATTGCAAATTGT...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS-3UTR GCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAAGATCTTATCTCAGAGTaGATATGTTTCACCGGACTC +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEDLISE*ICFTGL
Trigger: GAGTCCGGTGAAACATATGCACTCTGAGATAAGATC...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS-3UTR CCA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGTTAACACAGATTTCTaGCTGAAGCTTTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCVNTDF*LKLLPQ
Trigger: TTGTGGCAAAAGCTTCAGCCAGAAATCTGTGTTAAC...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCTCTGGGGATTGGAAATaGCAGAGAGACAACAATTCC +
Preference number: 4 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVSGDWK*QRDNNS
Trigger: GGAATTGTTGTCTCTCTGTCATTTCCAATCCCCAGA...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAATGTCTGACAAGGTCTaGAGTCCAGCGGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIMSDKV*SPAEVL
Trigger: AAGCACTTCCGCTGGACTTCAGACCTTGTCAGACAT...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCATTGACAAGGTCCACATaGAGCAGCCTTGAGATTTTT +
Preference number: 4 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSLTRST*SSLEIF
Trigger: AAAAATCTCAAGGCTGCTTCATGTGGACCTTGTCAA...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAAGGCCCATGGCAATCATaGTTCTGTAATTGTTATAGT +
Preference number: 4 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEGPWQS*FCNCYS
Trigger: ACTATAACAATTACAGAATCATGATTGCCATGGGCC...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR GCA 90 bp CCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCATTAACCAGGGAACTTGGCTaGAAGTGTTACCTTTATTTA +
Preference number: 4 (lower is better)
Translates to: PVHQNIIDQNENFPVGPLTRELG*KCYLYL
Trigger: TAAATAAAGGTAACACTTGCAGCCAAGTTCCCTGGT...TAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCAGGTGTCTAACAAGGTaGGAGTTACAAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVRCLTR*ELQVKL
Trigger: GAGCTTCACTTGTAACTCCCACCTTGTTAGACACCT...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATTCAGGTTGTACTTTaGATGAAACATCCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: VGGLVHMRECERFHYDRIIQVVL*MKHPLK
Trigger: CTTGAGGGGATGTTTCATCCAAAGTACAACCTGAAT...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAATGCAACCAAGAGACTaGTTGAATAACGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSMQPRD*LNNGKV
Trigger: AACCTTCCCGTTATTCAACCAGTCTCTTGGTTGCAT...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CCA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGTTAGGCTTAGATACTTaGTTTAGAAATGCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: HEAALRFFAHFHFSSASKLGLDT*FRNACL
Trigger: TAAGCAGGCATTTCTAAACCAAGTATCTAAGCCTAA...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS-3UTR GCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAGAAGTCCAGCGGAAGTaGTTTCCGCAATCATCACAT +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIEVQRK*FPQSSH
Trigger: ATGTGATGATTGCGGAAAGCACTTCCGCTGGACTTC...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR GCA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCTGGTTTAGAAATGCCTaGTTATTAGGACAGTATCTT +
Preference number: 4 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALWFRNA*LLGQYL
Trigger: AAGATACTGTCCTAATAAGCAGGCATTTCTAAACCA...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530393.6
3UTR CAA 72 bp GTAGTAGAAGTGCTAGGGATGCAACCAAGAGACTGGTaGAATAACGGGAAGGTTAAATGCATGAGTATTTTA +
Preference number: 4 (lower is better)
Translates to: VVEVLGMQPRDW*NNGKVKCMSIL
Trigger: TAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTGCATCCCTAGCACTTCTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR TCA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCAACCAAGAGACTGGTTaGATAACGGGAAGGTTAAAT +
Preference number: 4 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVNQETG*ITGRLN
Trigger: ATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTT...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR TCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAAGTGCCTTTGTAAGTTaGCAGTTTCCAAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILISAFVS*QFPNPL
Trigger: AAGGGGATTTGGAAACTGTCAACTTACAAAGGCACT...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CCA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAACCTTGTTGTACCCTTaGAATGATTGTCTACTTTCT +
Preference number: 4 (lower is better)
Translates to: QPRDWLNNGKVKCMSILITLLYP*NDCLLS
Trigger: AGAAAGTAGACAATCATTCCAAGGGTACAACAAGGT...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS GCA 90 bp CTGCCCTGGGTGTCACGGCTCCGACAGCTCCGGCGGCTCCTCCCCTaGCCCGGCTTCTCTCCCACCCACTCCCGACCGAAACAGCGCCGC +
Preference number: 5 (lower is better)
Translates to: LPWVSRLRQLRRLLP*PGFSPTHSRPKQRR
Trigger: GCGGCGCTGTTTCGGTCGGGAGTGGGTGGGAGAGAAGCCGGGGCAGGGGAGGAGCCGCCGGAGCTGTCGGAGCCGTGACACCCAGGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336139.8
ENST00000525391.1
ENST00000528306.5
ENST00000529250.5
ENST00000530393.6
ENST00000530944.1
ENST00000533463.5
CDS GCA 90 bp TTTTCTTCCAAGGGCCGGCTCCGACAGCTCCGGCGGCTCCTCCCCTaGCCCGGCTTCTCTCCCACCCACTCCCGACCGAAACAGCGCCGC +
Preference number: 5 (lower is better)
Translates to: FSSKGRLRQLRRLLP*PGFSPTHSRPKQRR
Trigger: GCGGCGCTGTTTCGGTCGGGAGTGGGTGGGAGAGAAGCCGGGGCAGGGGAGGAGCCGCCGGAGCTGTCGGAGCCGGCCCTTGGAAGAAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529691.1
CDS GCA 90 bp CATTCGTTGCATCGGCAGGGCCTCACTGAGGCGTGTCCTCTCAAGTaGTTGGCGAACGCTGCGCTGTGGGTGAAGCAGCGCCCGCACTCG +
Preference number: 5 (lower is better)
Translates to: HSLHRQGLTEACPLK*LANAALWVKQRPHS
Trigger: CGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGACACGCCTCAGTGAGGCCCTGCCGATGCAACGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 90 bp CTGAGGCGTGTCCTCTCAAGTGCTTGGCGAACGCTGCGCTGTGGGTaGAGCAGCGCCCGCACTCGCTGCAGAGGTAGAGTTCCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LRRVLSSAWRTLRCG*SSARTRCRGRVPQQ
Trigger: CTGCTGAGGAACTCTACCTCTGCAGCGAGTGCGGGCGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGACACGCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 90 bp GGTGTGGACGCTGCTCTGCCGGTGCCCCCAGATCTGGGCTCTGTGTaGTTTCCTCAGGAGACTGCTCGGGGGTCGAGCTTTGCACAGGAT +
Preference number: 5 (lower is better)
Translates to: GVDAALPVPPDLGSV*FPQETARGSSFAQD
Trigger: ATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCACACAGAGCCCAGATCTGGGGGCACCGGCAGAGCAGCGTCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS GCA 90 bp GCCGGTGCCCCCAGATCTGGGCTCTGTGTGGTTTCCTCAGGAGACTaGTCGGGGGTCGAGCTTTGCACAGGATCCTGCAGCTCATTAGGT +
Preference number: 5 (lower is better)
Translates to: AGAPRSGLCVVSSGD*SGVELCTGSCSSLG
Trigger: ACCTAATGAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCACACAGAGCCCAGATCTGGGGGCACCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 90 bp CAGCAGCGTGCGTCTTCCGGTGCGCCAGGTACCGCCTGTGTTCACTaGAGTCCTCACCACACTCTCCACACAAGTAGGGTTTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: QQRASSGAPGTACVH*SPHHTLHTSRVCLP
Trigger: TGGGAGGCAAACCCTACTTGTGTGGAGAGTGTGGTGAGGACTTCAGTGAACACAGGCGGTACCTGGCGCACCGGAAGACGCACGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 90 bp GCCCTCCTCCCAAGGCTATCCCACAACCTTTCTGAAGTAGCTTCCTaGATCAAGCCCCACGGGGCAGCTTGGAAGAGAAGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: ALLPRLSHNLSEVAS*IKPHGAAWKRSWEG
Trigger: TCCCTCCCAGCTTCTCTTCCAAGCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGATAGCCTTGGGAGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336139.8
CDS-3UTR CAA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCCTCTTCCCACATTCGTaGCATCGGCAGGGCCTCACT +
Preference number: 5 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPLFPHS*HRQGLT
Trigger: AGTGAGGCCCTGCCGATGCAACGAATGTGGGAAGAG...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGGCCACTTTCTGGCCGTaGGCCCCGCACCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMATFWP*APHPAL
Trigger: CAGAGCTGGGTGCGGGGCCAACGGCCAGAAAGTGGC...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTGCCACTTTCTGGCCGTaGGCCCCGCACCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSATFWP*APHPAL
Trigger: CAGAGCTGGGTGCGGGGCCAACGGCCAGAAAGTGGC...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS GCA 90 bp GTTTCCTCAGGAGACTGCTCGGGGGTCGAGCTTTGCACAGGATCCTaGAGCTCATTAGGTGACTCAGGCTCCACTCCTAAATGCACCGTC +
Preference number: 5 (lower is better)
Translates to: VSSGDCSGVELCTGS*SSLGDSGSTPKCTV
Trigger: GACGGTGCATTTAGGAGTGGAGCCTGAGTCACCTAATGAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 90 bp AACCTCCTCCCAAGGCTATCCCACAACCTTTCTGAAGTAGCTTCCTaGATCAAGCCCCACGGGGCAGCTTGGAAGAGAAGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: NLLPRLSHNLSEVAS*IKPHGAAWKRSWEG
Trigger: TCCCTCCCAGCTTCTCTTCCAAGCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGATAGCCTTGGGAGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530944.1
CDS-3UTR CAA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCGCCACTTTCTGGCCGTaGGCCCCGCACCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSATFWP*APHPAL
Trigger: CAGAGCTGGGTGCGGGGCCAACGGCCAGAAAGTGGC...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACTGTCCTCTCAAGTGCTaGGCGAACGCTGCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNCPLKC*ANAALW
Trigger: CCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGACA...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 90 bp CTTCCCACCAACAAACCTCCTCCCAAGGCTATCCCACAACCTTTCTaGAGTAGCTTCCTGGATCAAGCCCCACGGGGCAGCTTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LPTNKPPPKAIPQPF*SSFLDQAPRGSLEE
Trigger: CTCTTCCAAGCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGATAGCCTTGGGAGGAGGTTTGTTGGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530944.1
CDS-3UTR CAA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACTGTCCTCTCAAGTGCTaGGCGAACGCTGCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDCPLKC*ANAALW
Trigger: CCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGACA...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 90 bp AGATCCTGGTCCTCTGGTTCCACGGCTGTAGCCATTTCTTGGCTTTaGGGTGGTCTCACACCATCTAGAGCTCACACTGTCATTAGCCCC +
Preference number: 5 (lower is better)
Translates to: RSWSSGSTAVAISWL*GGLTPSRAHTVISP
Trigger: GGGGCTAATGACAGTGTGAGCTCTAGATGGTGTGAGACCACCCCAAAGCCAAGAAATGGCTACAGCCGTGGAACCAGAGGACCAGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336139.8
ENST00000528306.5
ENST00000529250.5
ENST00000529691.1
ENST00000530393.6
ENST00000533463.5
CDS-3UTR CAA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACCCTTGGTCTCCTGGGTaGTTTCTGCAAACCCTCCAC +
Preference number: 5 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNPWSPG*FLQTLH
Trigger: GTGGAGGGTTTGCAGAAACAACCCAGGAGACCAAGG...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCCTCGGGGGTCGAGCTTaGCACAGGATCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSLGGRA*HRILQL
Trigger: GAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAG...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGCGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRRKPPV*SPELCA
Trigger: AGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCG...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCAGCCATTTCTTGGCTTaGGGGTGGTCTCACACCATC +
Preference number: 5 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLASHFLA*GWSHTI
Trigger: GATGGTGTGAGACCACCCCAAAGCCAAGAAATGGCT...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGCCTTGGTCTCCTGGGTaGTTTCTGCAAACCCTCCAC +
Preference number: 5 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGPWSPG*FLQTLH
Trigger: GTGGAGGGTTTGCAGAAACAACCCAGGAGACCAAGG...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACAGCTTTTTCTCAGTCACCCACCGCCTaGGTCTCCTGGGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: WGQGVRTVLMVLPATAFSQSPTA*VSWVVS
Trigger: AGAAACAACCCAGGAGACCAAGGCGGTGGGTGACTG...AGAAAAAGCTGTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGCAGGATTTCTGGCTCTaGAGTCTCCTGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRQDFWL*SLLRLL
Trigger: CAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTG...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTCGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLRKPPV*SPELCA
Trigger: AGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCG...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCCCACATGAAGCAGCCTaGAGATTTTTCGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGPHEAA*RFFAHF
Trigger: GAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTGG...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS TCA 90 bp CCAGCACCGGGTCATCCCTCTGTAAGACAGACTCTGGCCGACAGGTaGAATCATCTTCCAGTTTCACCATCAGAATTCCCTCTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: PAPGHPSVRQTLADR*NHLPVSPSEFPLLP
Trigger: GGGAAGAAGAGGGAATTCTGATGGTGAAACTGGAAGATGATTTCACCTGTCGGCCAGAGTCTGTCTTACAGAGGGATGACCCGGTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336139.8
ENST00000528306.5
ENST00000529691.1
ENST00000530393.6
ENST00000533463.5
CDS CCA 90 bp TCCCAAAGATCCTGGTCCTCTGGTTCCACGGCTGTAGCCATTTCTTaGCTTTGGGGTGGTCTCACACCATCTAGAGCTCACACTGTCATT +
Preference number: 5 (lower is better)
Translates to: SQRSWSSGSTAVAIS*LWGGLTPSRAHTVI
Trigger: AATGACAGTGTGAGCTCTAGATGGTGTGAGACCACCCCAAAGCCAAGAAATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336139.8
ENST00000528306.5
ENST00000529250.5
ENST00000529691.1
ENST00000530393.6
ENST00000533463.5
CDS CCA 90 bp ACTCAGGATTTCTGGCTCTTGAGTCTCCTGAGGCTCTTGGATATCTaGGACCCAAGGCTCTTCCTCTCTAACCTGGGAGATCTCATCAGG +
Preference number: 5 (lower is better)
Translates to: TQDFWLLSLLRLLDI*DPRLFLSNLGDLIR
Trigger: CCTGATGAGATCTCCCAGGTTAGAGAGGAAGAGCCTTGGGTCCCAGATATCCAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCTCGGGGGTCGAGCTTaGCACAGGATCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALLGGRA*HRILQL
Trigger: GAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAG...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TTTAACCCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCGGTGTCAGAACAGTCTaGATGGTCTTGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: FNPIPCAPLMEDVSPVLAGVRTV*MVLPAT
Trigger: TGTTGCTGGCAAGACCATCAAGACTGTTCTGACACC...GGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGGGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGACGTCTCCCCAGTTCTaGCCACTCCCACAATCAGAG +
Preference number: 5 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMTSPQF*PLPQSE
Trigger: CTCTGATTGTGGGAGTGGCAAGAACTGGGGAGACGT...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCCAGAAACCAGGGAACTaGGCTGCAAGTGTTACCTTT +
Preference number: 5 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGQKPGN*AASVTF
Trigger: AAAGGTAACACTTGCAGCCAAGTTCCCTGGTTTCTG...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATAGCCATTTCTTGGCTTaGGGGTGGTCTCACACCATC +
Preference number: 5 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDSHFLA*GWSHTI
Trigger: GATGGTGTGAGACCACCCCAAAGCCAAGAAATGGCT...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTCTCGGGGGTCGAGCTTaGCACAGGATCCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: MVRSESDSEGSMQLSCECLGGRA*HRILQL
Trigger: GAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAG...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CCCATACCCTGTGCTCCACTTATGGAGGACGTCTCCCCAGTTCTTGCCACTCCCTTCTGGCTGAAGCTTTaGCCACAAATAGTACAAAAG +
Preference number: 5 (lower is better)
Translates to: PIPCAPLMEDVSPVLATPFWLKL*PQIVQK
Trigger: CTTTTGTACTATTTGTGGCAAAAGCTTCAGCCAGAA...GGGAGTGGCAAGAACTGGGGAGACGTCCTCCATAAGTGGAGCACAGGGTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGCTCTTCCCACATTCGTaGCATCGGCAGGGCCTCACT +
Preference number: 5 (lower is better)
Translates to: HEAALRFFAHFHFSSASKLFPHS*HRQGLT
Trigger: AGTGAGGCCCTGCCGATGCAACGAATGTGGGAAGAG...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 90 bp TCTTCCAGTTTCACCATCAGAATTCCCTCTTCTTCCCAAAGATCCTaGTCCTCTGGTTCCACGGCTGTAGCCATTTCTTGGCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SSSFTIRIPSSSQRS*SSGSTAVAISWLWG
Trigger: ACCCCAAAGCCAAGAAATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTTTGGGAAGAAGAGGGAATTCTGATGGTGAAACTGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336139.8
ENST00000528306.5
ENST00000529250.5
ENST00000529691.1
ENST00000530393.6
ENST00000533463.5
CDS-3UTR CAA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACCATCAGGTCTGGGGATaGGAAATGACAGAGAGACAA +
Preference number: 5 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDHQVWG*EMTERQ
Trigger: TTGTCTCTCTGTCATTTCCAATCCCCAGACCTGATG...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCAGTCTCCTGAGGCTCTaGGATATCTGGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLSLLRL*DIWDPR
Trigger: CCTTGGGTCCCAGATATCCAAGAGCCTCAGGAGACT...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGTGTCCTCTCAAGTGCTaGGCGAACGCTGCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: GGLVHMRECERFHYDRIMCPLKC*ANAALW
Trigger: CCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGACA...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CCCTGTTGGGCCATTAGGGTTGGAGTCTTATTAACCCTCCCCTATTCCTCGGGCGTAACAGCCTATTTTTaGGACGATATAGGAACCACG +
Preference number: 5 (lower is better)
Translates to: PCWAIRVGVLLTLPYSSGVTAYF*DDIGTT
Trigger: CGTGGTTCCTATATCGTCCAAAAAATAGGCTGTTAC...GCCCGAGGAATAGGGGAGGGTTAATAAGACTCCAACCCTAATGGCCCAACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACTGGCAACAGAGATTGTaGGGCCATCATGAGATGCTA +
Preference number: 5 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDWQQRL*GHHEML
Trigger: TAGCATCTCATGATGGCCCAACAATCTCTGTTGCCA...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGGACCCTCATCTGTACAATTaGCAATGGCTGAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: PGSTLSVMSEYSVRDDGDPHLYN*QWLSPS
Trigger: TGAGGGACTCAGCCATTGCAAATTGTACAGATGAGG...GTCCCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS-3UTR CAA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGGCTGTAGCCATTTCTaGGCTTTGGGGTGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCGCSHF*ALGWSH
Trigger: GTGAGACCACCCCAAAGCCAAGAAATGGCTACAGCC...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAACAGTCACCCACCGCCTaGGTCTCCTGGGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEQSPTA*VSWVVS
Trigger: AGAAACAACCCAGGAGACCAAGGCGGTGGGTGACTG...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp AGGGTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATAGAACTCTTTCTGTGTaGGGTCCAGATCACTCCACT +
Preference number: 5 (lower is better)
Translates to: RVPGSTLSVMSEYSVRDDRTLSV*GPDHST
Trigger: AGTGGAGTGATCTGGACCCAACACAGAAAGAGTTCT...ATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCAGTCTCCTGAGGCTCTaGGATATCTGGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALSLLRL*DIWDPR
Trigger: CCTTGGGTCCCAGATATCCAAGAGCCTCAGGAGACT...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGGGATTCTTTGGTGTGTaGTTAACACAGATTTCTGGC +
Preference number: 5 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRGFFGV*LTQISG
Trigger: GCCAGAAATCTGTGTTAACAACACACCAAAGAATCC...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GTCCCAGGTTCAACACTTTCCGTGATGTCAGAGTACTCAGTCAGGGATGATGGGTTGGCCACTTTCAACTaGAAGCTGTTGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: VPGSTLSVMSEYSVRDDGLATFN*KLLSSL
Trigger: AAGACTGCTCAACAGCTTCAAGTTGAAAGTGGCCAA...CCCATCATCCCTGACTGAGTACTCTGACATCACGGAAAGTGTTGAACCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCGCAAACCTCCTGTCTaGAGTCCAGAGCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALRKPPV*SPELCA
Trigger: AGCACACAGCTCTGGACTCAAGACAGGAGGTTTGCG...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTATGGAGAACTGGCAACAGAGATaGTTGGGCCATCATGAGATG +
Preference number: 5 (lower is better)
Translates to: RRLSLSCFNPIPCAPLMENWQQR*LGHHEM
Trigger: CATCTCATGATGGCCCAACAATCTCTGTTGCCAGTT...CTCCATAAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS CCA 90 bp CTCATCTTTACTCCTATCTCCTGTGTAGGTAAAACTCAGGATTTCTaGCTCTTGAGTCTCCTGAGGCTCTTGGATATCTGGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: LIFTPISCVGKTQDF*LLSLLRLLDIWDPR
Trigger: CCTTGGGTCCCAGATATCCAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTTACCTACACAGGAGATAGGAGTAAAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAACCTTGGTCTCCTGGGTaGTTTCTGCAAACCCTCCAC +
Preference number: 5 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEPWSPG*FLQTLH
Trigger: GTGGAGGGTTTGCAGAAACAACCCAGGAGACCAAGG...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGAGAACTCTTTCTGTGTaGGGTCCAGATCACTCCACT +
Preference number: 5 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHERTLSV*GPDHST
Trigger: AGTGGAGTGATCTGGACCCAACACAGAAAGAGTTCT...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTAGTCTCCTGAGGCTCTaGGATATCTGGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: VGGLVHMRECERFHYDRISLLRL*DIWDPR
Trigger: CCTTGGGTCCCAGATATCCAAGAGCCTCAGGAGACT...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTCAGGATTTCTGGCTCTaGAGTCTCCTGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCQDFWL*SLLRLL
Trigger: CAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTG...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TCAGGGATGATGGGGACAGGGTGTCAGAACAGTCTTGATGGTCTTGCCAGCAACTTAAGTCTACCTGGATaGTCCTCAAAGACTATTTCC +
Preference number: 5 (lower is better)
Translates to: SGMMGTGCQNSLDGLASNLSLPG*SSKTIS
Trigger: GGAAATAGTCTTTGAGGACAATCCAGGTAGACTTAA...GTTGCTGGCAAGACCATCAAGACTGTTCTGACACCCTGTCCCCATCATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GCAGGAAGAGGTAATGTCAGATCTGAGCAGGTCAGGGAGACTCCCTCGAAAAGGTTCTGGCTGAAGCTTTaGCCACAAATAGTACAAAAG +
Preference number: 5 (lower is better)
Translates to: AGRGNVRSEQVRETPSKRFWLKL*PQIVQK
Trigger: CTTTTGTACTATTTGTGGCAAAAGCTTCAGCCAGAA...CCTTTTCGAGGGAGTCTCCCTGACCTGCTCAGATCTGACATTACCTCTTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AGGCACAGAAGACTCTCCCTGTCATGCTTTAACCCCATACCCTGTGCTCCACTTGTAACAGCCTATTTTTaGGACGATATAGGAACCACG +
Preference number: 5 (lower is better)
Translates to: RHRRLSLSCFNPIPCAPLVTAYF*DDIGTT
Trigger: CGTGGTTCCTATATCGTCCAAAAAATAGGCTGTTAC...AAGTGGAGCACAGGGTATGGGGTTAAAGCATGACAGGGAGAGTCTTCTGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGGCACCTGATAACAATTaGACGCTGGGGGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GGLVHMRECERFHYDRIMAPDNN*TLGEGA
Trigger: TGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTGC...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAAACGTCTCCCCAGTTCTaGCCACTCCCACAATCAGAG +
Preference number: 5 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTETSPQF*PLPQSE
Trigger: CTCTGATTGTGGGAGTGGCAAGAACTGGGGAGACGT...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp GGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTATGAGCCATTTCTTGGCTTaGGGGTGGTCTCACACCATC +
Preference number: 5 (lower is better)
Translates to: GGLVHMRECERFHYDRIMSHFLA*GWSHTI
Trigger: GATGGTGTGAGACCACCCCAAAGCCAAGAAATGGCT...CATAATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GTTGGTGGGCTTGTGCATATGAGGGAATGTGAACGATTTCATTATGACCGAATTCAGGATTTCTGGCTCTaGAGTCTCCTGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: VGGLVHMRECERFHYDRIQDFWL*SLLRLL
Trigger: CAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTG...AATTCGGTCATAATGAAATCGTTCACATTCCCTCATATGCACAAGCCCACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCCACATGAAGCAGCCTaGAGATTTTTCGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALPHEAA*RFFAHF
Trigger: GAAGTGGGCGAAAAATCTCAAGGCTGCTTCATGTGG...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAGCACCTGATAACAATTaGACGCTGGGGGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSAPDNN*TLGEGA
Trigger: TGCTCCCTCCCCCAGCGTCAAATTGTTATCAGGTGC...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGGGTGTCAGAACAGTCTaGATGGTCTTGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMGVRTV*MVLPAT
Trigger: TGTTGCTGGCAAGACCATCAAGACTGTTCTGACACC...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGGTGTCAGAACAGTCTaGATGGTCTTGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: KCMVRSESDSEGSMQLSCGVRTV*MVLPAT
Trigger: TGTTGCTGGCAAGACCATCAAGACTGTTCTGACACC...ACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CCTCATCTCCAAGGAACCTTTAACTGGCAACAGAGATTGTTGGGCCATCATGAGCCAGAAGGACAACGGTaGACTGGTATTAAGACCAAA +
Preference number: 5 (lower is better)
Translates to: PHLQGTFNWQQRLLGHHEPEGQR*TGIKTK
Trigger: TTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGG...CTCATGATGGCCCAACAATCTCTGTTGCCAGTTAAAGGTTCCTTGGAGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCGGCTGTAGCCATTTCTaGGCTTTGGGGTGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVGCSHF*ALGWSH
Trigger: GTGAGACCACCCCAAAGCCAAGAAATGGCTACAGCC...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCAGAACTCTTTCTGTGTaGGGTCCAGATCACTCCACT +
Preference number: 5 (lower is better)
Translates to: VLSPELCALRFDPSKDRIRTLSV*GPDHST
Trigger: AGTGGAGTGATCTGGACCCAACACAGAAAGAGTTCT...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AGGCAGGTGCACTCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGTTCTGGCTGAAGCTTTaGCCACAAATAGTACAAAAG +
Preference number: 5 (lower is better)
Translates to: RQVHSSEGEASIQVVLWMFWLKL*PQIVQK
Trigger: CTTTTGTACTATTTGTGGCAAAAGCTTCAGCCAGAA...CATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGAGTGCACCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCCCAGAAGGACAACGGTaGACTGGTATTAAGACCAAA +
Preference number: 5 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLPEGQR*TGIKTK
Trigger: TTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGG...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCATTACTGCAAACTCCAGGCTaGGATCTTATCTCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: PVHQNIIDQNENFPVGPLLQTPG*DLISEC
Trigger: GCACTCTGAGATAAGATCCAAGCCTGGAGTTTGCAG...TAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS-3UTR CAA 90 bp GTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTGTGGCAAAGCAGGAGAAACTATCTTTaGTGGCAGACATTTCACCCA +
Preference number: 5 (lower is better)
Translates to: VNQTARDLCSYPVNVWQSRRNYL*WQTFHP
Trigger: TGGGTGAAATGTCTGCCACAAAAGATAGTTTCTCCT...GCTTTGCCACACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530393.6
CDS TCA 90 bp CTACCTGGATTGTCCTCAAAGACTATTTCCCAATCTGGAGTCTGGTaGATTTCTGGTTCTCCCAAAACAGGCCTGTGTATATCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LPGLSSKTISQSGVW*ISGSPKTGLCISSK
Trigger: TTTGGAGGATATACACAGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTTGAGGACAATCCAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATACAGTCACCCACCGCCTaGGTCTCCTGGGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIQSPTA*VSWVVS
Trigger: AGAAACAACCCAGGAGACCAAGGCGGTGGGTGACTG...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CCAGTCCATCAGAATATCATCGACCAAAATGAGAATTTCCCTGTTGGGCCATTACATCAGGTCTGGGGATaGGAAATGACAGAGAGACAA +
Preference number: 5 (lower is better)
Translates to: PVHQNIIDQNENFPVGPLHQVWG*EMTERQ
Trigger: TTGTCTCTCTGTCATTTCCAATCCCCAGACCTGATG...TAATGGCCCAACAGGGAAATTCTCATTTTGGTCGATGATATTCTGATGGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CATGAAGCAGCCTTGAGATTTTTCGCCCACTTCCATTTCTCCTCAGCATCAAAGGGATTCTTTGGTGTGTaGTTAACACAGATTTCTGGC +
Preference number: 5 (lower is better)
Translates to: HEAALRFFAHFHFSSASKGFFGV*LTQISG
Trigger: GCCAGAAATCTGTGTTAACAACACACCAAAGAATCC...CTTTGATGCTGAGGAGAAATGGAAGTGGGCGAAAAATCTCAAGGCTGCTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCTTGGCCACTTTCAACTaGAAGCTGTTGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: VLSPELCALRFDPSKDRILATFN*KLLSSL
Trigger: AAGACTGCTCAACAGCTTCAAGTTGAAAGTGGCCAA...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAACAGAAACCAGGGAACTaGGCTGCAAGTGTTACCTTT +
Preference number: 5 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEQKPGN*AASVTF
Trigger: AAAGGTAACACTTGCAGCCAAGTTCCCTGGTTTCTG...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS CCA 90 bp ATTGTCCTCAAAGACTATTTCCCAATCTGGAGTCTGGTGAATTTCTaGTTCTCCCAAAACAGGCCTGTGTATATCCTCCAAACTCAGATC +
Preference number: 5 (lower is better)
Translates to: IVLKDYFPIWSLVNF*FSQNRPVYILQTQI
Trigger: GATCTGAGTTTGGAGGATATACACAGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTTGAGGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TCCAGTGAAGGAGAAGCCTCAATTCAGGTTGTACTTTGGATGAAACATCCCCTCAATTCAGGTTGTACTTaGGATGAAACATCCCCTCAA +
Preference number: 5 (lower is better)
Translates to: SSEGEASIQVVLWMKHPLNSGCT*DETSPQ
Trigger: TTGAGGGGATGTTTCATCCAAAGTACAACCTGAATT...GAGGGGATGTTTCATCCAAAGTACAACCTGAATTGAGGCTTCTCCTTCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAACCAAGAGACTGGTaGAATAACGGGAAGGTTAAA +
Preference number: 5 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMQPRDW*NNGKVK
Trigger: TTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp GTCTTGAGTCCAGAGCTGTGTGCTTTAAGATTTGACCCCAGTAAAGACAGAATCCAACCAAGAGACTGGTaGAATAACGGGAAGGTTAAA +
Preference number: 5 (lower is better)
Translates to: VLSPELCALRFDPSKDRIQPRDW*NNGKVK
Trigger: TTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG...GATTCTGTCTTTACTGGGGTCAAATCTTAAAGCACACAGCTCTGGACTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp ATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGCAGTTATCCTGTGAATGTTACTCCCAGATCTATTaGAGTATGAACCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: MVRSESDSEGSMQLSCECYSQIY*SMNHPQ
Trigger: CTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA...ACATTCACAGGATAACTGCATAGATCCCTCGCTGTCTGATTCACTTCTTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS CCA 90 bp TTCATTAAGTCTACCTGGATTGTCCTCAAAGACTATTTCCCAATCTaGAGTCTGGTGAATTTCTGGTTCTCCCAAAACAGGCCTGTGTAT +
Preference number: 5 (lower is better)
Translates to: FIKSTWIVLKDYFPI*SLVNFWFSQNRPVY
Trigger: ATACACAGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTTGAGGACAATCCAGGTAGACTTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp AGCATCAAAGGAAAGTGCATGGTAAGAAGTGAATCAGACAGCGAGGGATCTATGTTAAGTCTACCTGGATaGTCCTCAAAGACTATTTCC +
Preference number: 5 (lower is better)
Translates to: SIKGKCMVRSESDSEGSMLSLPG*SSKTIS
Trigger: GGAAATAGTCTTTGAGGACAATCCAGGTAGACTTAA...CATAGATCCCTCGCTGTCTGATTCACTTCTTACCATGCACTTTCCTTTGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp TACTCCCAGATCTATTTGAGTATGAACCACCCTCAGAAGTATCAGGACACTGAAGGATTCTTTGGTGTGTaGTTAACACAGATTTCTGGC +
Preference number: 5 (lower is better)
Translates to: YSQIYLSMNHPQKYQDTEGFFGV*LTQISG
Trigger: GCCAGAAATCTGTGTTAACAACACACCAAAGAATCC...TTCAGTGTCCTGATACTTCTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCATTGGCCACTTTCAACTaGAAGCTGTTGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSLATFN*KLLSSL
Trigger: AAGACTGCTCAACAGCTTCAAGTTGAAAGTGGCCAA...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp TTAAGTCTCTTAGTTCTCCTACTTTATACCCATGAGGTAGAGGCAGGTGCACTCCTTATTTTCCATAATTaGGTCTTAGTCGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSLLVLLLYTHEVEAGALLIFHN*VLVVLQ
Trigger: CTGGAGAACGACTAAGACCAAATTATGGAAAATAAG...GAGTGCACCTGCCTCTACCTCATGGGTATAAAGTAGGAGAACTAAGAGACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATACATCAGGTCTGGGGATaGGAAATGACAGAGAGACAA +
Preference number: 5 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIHQVWG*EMTERQ
Trigger: TTGTCTCTCTGTCATTTCCAATCCCCAGACCTGATG...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp CTCAAGGAAAAATACTCTGTACTCCCAGATCTATTTGAGTATGAACCACCCTCAAATTCAGGTTGTACTTaGGATGAAACATCCCCTCAA +
Preference number: 5 (lower is better)
Translates to: LKEKYSVLPDLFEYEPPSNSGCT*DETSPQ
Trigger: TTGAGGGGATGTTTCATCCAAAGTACAACCTGAATT...TGAGGGTGGTTCATACTCAAATAGATCTGGGAGTACAGAGTATTTTTCCTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATAAACTGGCAACAGAGATaGTTGGGCCATCATGAGATG +
Preference number: 5 (lower is better)
Translates to: QPRDWLNNGKVKCMSILINWQQR*LGHHEM
Trigger: CATCTCATGATGGCCCAACAATCTCTGTTGCCAGTT...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCAATTCAGGTTGTACTTaGGATGAAACATCCCCTCAA +
Preference number: 5 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVNSGCT*DETSPQ
Trigger: TTGAGGGGATGTTTCATCCAAAGTACAACCTGAATT...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATATACTCCCAGATCTATTaGAGTATGAACCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIYSQIY*SMNHPQ
Trigger: CTGAGGGTGGTTCATACTCAAATAGATCTGGGAGTA...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS-3UTR CAA 90 bp CAACCAAGAGACTGGTTGAATAACGGGAAGGTTAAATGCATGAGTATTTTAATACAACCAAGAGACTGGTaGAATAACGGGAAGGTTAAA +
Preference number: 5 (lower is better)
Translates to: QPRDWLNNGKVKCMSILIQPRDW*NNGKVK
Trigger: TTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG...TATTAAAATACTCATGCATTTAACCTTCCCGTTATTCAACCAGTCTCTTGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS-3UTR CAA 90 bp ATATGTATATTTCCAGAAGGACAACGGTTGACTGGTATTAAGACCAAACCAGTCCTTATTTTCCATAATTaGGTCTTAGTCGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ICIFPEGQRLTGIKTKPVLIFHN*VLVVLQ
Trigger: CTGGAGAACGACTAAGACCAAATTATGGAAAATAAG...GACTGGTTTGGTCTTAATACCAGTCAACCGTTGTCCTTCTGGAAATATACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336139.8
ENST00000530393.6
CDS CAA 72 bp CGGCAGGGCCTCACTGAGGCGTGTCCTCTCAAGTGCTaGGCGAACGCTGCGCTGTGGGTGAAGCAGCGCCCG +
Preference number: 6 (lower is better)
Translates to: RQGLTEACPLKC*ANAALWVKQRP
Trigger: CGGGCGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGACACGCCTCAGTGAGGCCCTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS GCA 72 bp CATCGGCAGGGCCTCACTGAGGCGTGTCCTCTCAAGTaGTTGGCGAACGCTGCGCTGTGGGTGAAGCAGCGC +
Preference number: 6 (lower is better)
Translates to: HRQGLTEACPLK*LANAALWVKQR
Trigger: GCGCTGCTTCACCCACAGCGCAGCGTTCGCCAAGCACTTGAGAGGACACGCCTCAGTGAGGCCCTGCCGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS GCA 72 bp GGTCTGGAGCTCCTCTTCCTGGTGTGGACGCTGCTCTaGCGGTGCCCCCAGATCTGGGCTCTGTGTGGTTTC +
Preference number: 6 (lower is better)
Translates to: GLELLFLVWTLL*RCPQIWALCGF
Trigger: GAAACCACACAGAGCCCAGATCTGGGGGCACCGGCAGAGCAGCGTCCACACCAGGAAGAGGAGCTCCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 72 bp GCTGCTCTGCCGGTGCCCCCAGATCTGGGCTCTGTGTaGTTTCCTCAGGAGACTGCTCGGGGGTCGAGCTTT +
Preference number: 6 (lower is better)
Translates to: AALPVPPDLGSV*FPQETARGSSF
Trigger: AAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCACACAGAGCCCAGATCTGGGGGCACCGGCAGAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS GCA 72 bp CCCAGATCTGGGCTCTGTGTGGTTTCCTCAGGAGACTaGTCGGGGGTCGAGCTTTGCACAGGATCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PRSGLCVVSSGD*SGVELCTGSCS
Trigger: GCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCACACAGAGCCCAGATCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 72 bp AAGGGCCCTCCTCCCAAGGCTATCCCACAACCTTTCTaGAGTAGCTTCCTGGATCAAGCCCCACGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: KGPPPKAIPQPF*SSFLDQAPRGS
Trigger: GCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGATAGCCTTGGGAGGAGGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336139.8
CDS TCA 72 bp AAATGCACCGTCTCCTCTGACAGGACTTCCTGGCCGTaGACATGGACAGTCACCCACCGCCTTGGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: KCTVSSDRTSWP*TWTVTHRLGLL
Trigger: CAGGAGACCAAGGCGGTGGGTGACTGTCCATGTTCACGGCCAGGAAGTCCTGTCAGAGGAGACGGTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 72 bp GCGTCTTCCGGTGCGCCAGGTACCGCCTGTGTTCACTaGAGTCCTCACCACACTCTCCACACAAGTAGGGTT +
Preference number: 6 (lower is better)
Translates to: ASSGAPGTACVH*SPHHTLHTSRV
Trigger: AACCCTACTTGTGTGGAGAGTGTGGTGAGGACTTCAGTGAACACAGGCGGTACCTGGCGCACCGGAAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS GCA 72 bp GTGGTTTCCTCAGGAGACTGCTCGGGGGTCGAGCTTTaGACAGGATCCTGCAGCTCATTAGGTGACTCAGGC +
Preference number: 6 (lower is better)
Translates to: VVSSGDCSGVEL*TGSCSSLGDSG
Trigger: GCCTGAGTCACCTAATGAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCCTGAGGAAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 72 bp GGTATAGCTCCTCCCAAGGCTATCCCACAACCTTTCTaGAGTAGCTTCCTGGATCAAGCCCCACGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: GIAPPKAIPQPF*SSFLDQAPRGS
Trigger: GCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGATAGCCTTGGGAGGAGCTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526252.5
ENST00000533463.5
CDS GCA 72 bp GGAGACTGCTCGGGGGTCGAGCTTTGCACAGGATCCTaGAGCTCATTAGGTGACTCAGGCTCCACTCCTAAA +
Preference number: 6 (lower is better)
Translates to: GDCSGVELCTGS*SSLGDSGSTPK
Trigger: TTTAGGAGTGGAGCCTGAGTCACCTAATGAGCTGCAGGATCCTGTGCAAAGCTCGACCCCCGAGCAGTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 72 bp AACAAACCTCCTCCCAAGGCTATCCCACAACCTTTCTaGAGTAGCTTCCTGGATCAAGCCCCACGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: NKPPPKAIPQPF*SSFLDQAPRGS
Trigger: GCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGATAGCCTTGGGAGGAGGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530944.1
CDS CCA 72 bp CCAAGGCTATCCCACAACCTTTCTGAAGTAGCTTCCTaGATCAAGCCCCACGGGGCAGCTTGGAAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: PRLSHNLSEVAS*IKPHGAAWKRS
Trigger: GCTTCTCTTCCAAGCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGGTTGTGGGATAGCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336139.8
ENST00000526252.5
ENST00000530944.1
ENST00000533463.5
CDS CCA 72 bp TCCTGGTCCTCTGGTTCCACGGCTGTAGCCATTTCTTaGCTTTGGGGTGGTCTCACACCATCTAGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: SWSSGSTAVAIS*LWGGLTPSRAH
Trigger: GTGAGCTCTAGATGGTGTGAGACCACCCCAAAGCCAAGAAATGGCTACAGCCGTGGAACCAGAGGACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336139.8
ENST00000528306.5
ENST00000529250.5
ENST00000529691.1
ENST00000530393.6
ENST00000533463.5
CDS TCA 72 bp CTTCCTCCTGGCTTTGCTCAAGGGTCCTTTAGCATTTaGGGAGATGATAAGGGATGGGATCCCCGCCTGTTG +
Preference number: 6 (lower is better)
Translates to: LPPGFAQGSFSI*GDDKGWDPRLL
Trigger: CAACAGGCGGGGATCCCATCCCTTATCATCTCCTCAAATGCTAAAGGACCCTTGAGCAAAGCCAGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525391.1
CDS CCA 72 bp TTCTGGCTCTTGAGTCTCCTGAGGCTCTTGGATATCTaGGACCCAAGGCTCTTCCTCTCTAACCTGGGAGAT +
Preference number: 6 (lower is better)
Translates to: FWLLSLLRLLDI*DPRLFLSNLGD
Trigger: ATCTCCCAGGTTAGAGAGGAAGAGCCTTGGGTCCCAGATATCCAAGAGCCTCAGGAGACTCAAGAGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 72 bp TACCCTTGGAATGATTGTCTTTCTGAAGTAGCTTCCTaGATCAAGCCCCACGGGGCAGCTTGGAAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: YPWNDCLSEVAS*IKPHGAAWKRS
Trigger: GCTTCTCTTCCAAGCTGCCCCGTGGGGCTTGATCCAGGAAGCTACTTCAGAAAGACAATCATTCCAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528306.5
CDS CCA 72 bp TTCACCATCAGAATTCCCTCTTCTTCCCAAAGATCCTaGTCCTCTGGTTCCACGGCTGTAGCCATTTCTTGG +
Preference number: 6 (lower is better)
Translates to: FTIRIPSSSQRS*SSGSTAVAISW
Trigger: CCAAGAAATGGCTACAGCCGTGGAACCAGAGGACCAGGATCTTTGGGAAGAAGAGGGAATTCTGATGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336139.8
ENST00000528306.5
ENST00000529250.5
ENST00000529691.1
ENST00000530393.6
ENST00000533463.5
CDS CAA 90 bp GTGTGGATACTCCCTGTTTCACGTCTAGATGACTTCCTCCTGGCTTaGCTCAAGGGTCCTTTAGCATTTGAGGAGATGATAAGGGATGGG +
Preference number: 6 (lower is better)
Translates to: VWILPVSRLDDFLLA*LKGPLAFEEMIRDG
Trigger: CCCATCCCTTATCATCTCCTCAAATGCTAAAGGACCCTTGAGCAAAGCCAGGAGGAAGTCATCTAGACGTGAAACAGGGAGTATCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525391.1
CDS TCA 72 bp GGTCATCCCTCTGTAAGACAGACTCTGGCCGACAGGTaGAATCATCTTCCAGTTTCACCATCAGAATTCCCT +
Preference number: 6 (lower is better)
Translates to: GHPSVRQTLADR*NHLPVSPSEFP
Trigger: AGGGAATTCTGATGGTGAAACTGGAAGATGATTTCACCTGTCGGCCAGAGTCTGTCTTACAGAGGGATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336139.8
ENST00000528306.5
ENST00000529691.1
ENST00000530393.6
ENST00000533463.5
CDS TCA 72 bp CTTCCAAGGGCCCTCATCTGTACAATTTGCAATGGCTaGGTCCCTCACATTGTGGTAAACCTTGTTGTACCC +
Preference number: 6 (lower is better)
Translates to: LPRALICTICNG*VPHIVVNLVVP
Trigger: GGGTACAACAAGGTTTACCACAATGTGAGGGACTCAGCCATTGCAAATTGTACAGATGAGGGCCCTTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528306.5
ENST00000529250.5
ENST00000530393.6
ENST00000533463.5
CDS CAA 72 bp ATCTCCTGTGTAGGTAAAACTCAGGATTTCTGGCTCTaGAGTCTCCTGAGGCTCTTGGATATCTGGGACCCA +
Preference number: 6 (lower is better)
Translates to: ISCVGKTQDFWL*SLLRLLDIWDP
Trigger: TGGGTCCCAGATATCCAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTTACCTACACAGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CAA 90 bp TTTACTCCTATCTCCTGTGTAGGTAAAACTCAGGATTTCTGGCTCTaGAGTCTCCTGAGGCTCTTGGATATCTGGGACCCAAGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: FTPISCVGKTQDFWL*SLLRLLDIWDPRLF
Trigger: GAAGAGCCTTGGGTCCCAGATATCCAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTTACCTACACAGGAGATAGGAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 72 bp AACGTGAAGCCCCTCATCTGTACAATTTGCAATGGCTaGGTCCCTCACATTGTGGTAAACCTTGTTGTACCC +
Preference number: 6 (lower is better)
Translates to: NVKPLICTICNG*VPHIVVNLVVP
Trigger: GGGTACAACAAGGTTTACCACAATGTGAGGGACTCAGCCATTGCAAATTGTACAGATGAGGGGCTTCACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526252.5
CDS CCA 72 bp ACTCCTATCTCCTGTGTAGGTAAAACTCAGGATTTCTaGCTCTTGAGTCTCCTGAGGCTCTTGGATATCTGG +
Preference number: 6 (lower is better)
Translates to: TPISCVGKTQDF*LLSLLRLLDIW
Trigger: CCAGATATCCAAGAGCCTCAGGAGACTCAAGAGCCAGAAATCCTGAGTTTTACCTACACAGGAGATAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CAA 72 bp CTCCCTGTTTCACGTCTAGATGACTTCCTCCTGGCTTaGCTCAAGGGTCCTTTAGCATTTGAGGAGATGATA +
Preference number: 6 (lower is better)
Translates to: LPVSRLDDFLLA*LKGPLAFEEMI
Trigger: TATCATCTCCTCAAATGCTAAAGGACCCTTGAGCAAAGCCAGGAGGAAGTCATCTAGACGTGAAACAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525391.1
CDS CCA 72 bp TCTACCTGGATTGTCCTCAAAGACTATTTCCCAATCTaGAGTCTGGTGAATTTCTGGTTCTCCCAAAACAGG +
Preference number: 6 (lower is better)
Translates to: STWIVLKDYFPI*SLVNFWFSQNR
Trigger: CCTGTTTTGGGAGAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTTGAGGACAATCCAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 72 bp TTTTCTTCCAAGGGCCCTCATCTGTACAATTTGCAATaGCTGAGTCCCTCACATTGTGGTAAACCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: FSSKGPHLYNLQ*LSPSHCGKPCC
Trigger: ACAACAAGGTTTACCACAATGTGAGGGACTCAGCCATTGCAAATTGTACAGATGAGGGCCCTTGGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528306.5
ENST00000529250.5
ENST00000530393.6
ENST00000533463.5
CDS CCA 72 bp TCAAAACGTGAAGCCCCTCATCTGTACAATTTGCAATaGCTGAGTCCCTCACATTGTGGTAAACCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: SKREAPHLYNLQ*LSPSHCGKPCC
Trigger: ACAACAAGGTTTACCACAATGTGAGGGACTCAGCCATTGCAAATTGTACAGATGAGGGGCTTCACGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526252.5
CDS TCA 72 bp TTGTCCTCAAAGACTATTTCCCAATCTGGAGTCTGGTaGATTTCTGGTTCTCCCAAAACAGGCCTGTGTATA +
Preference number: 6 (lower is better)
Translates to: LSSKTISQSGVW*ISGSPKTGLCI
Trigger: TATACACAGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTTGAGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS TCA 72 bp GTTCATCTTGTGAACCTTTTGGTGCCTGGCAAGATGTaGGCTTCGTGTGTAACTTTTTCCACATTCCATACA +
Preference number: 6 (lower is better)
Translates to: VHLVNLLVPGKM*ASCVTFSTFHT
Trigger: TGTATGGAATGTGGAAAAAGTTACACACGAAGCTCACATCTTGCCAGGCACCAAAAGGTTCACAAGATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CCA 72 bp AAAGACTATTTCCCAATCTGGAGTCTGGTGAATTTCTaGTTCTCCCAAAACAGGCCTGTGTATATCCTCCAA +
Preference number: 6 (lower is better)
Translates to: KDYFPIWSLVNF*FSQNRPVYILQ
Trigger: TTGGAGGATATACACAGGCCTGTTTTGGGAGAACCAGAAATTCACCAGACTCCAGATTGGGAAATAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6
CDS CAA 72 bp TTAGTACCAAATCTTCTTTCATTAAGTCTACCTGGATaGTCCTCAAAGACTATTTCCCAATCTGGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: LVPNLLSLSLPG*SSKTISQSGVW
Trigger: CCAGACTCCAGATTGGGAAATAGTCTTTGAGGACAATCCAGGTAGACTTAATGAAAGAAGATTTGGTACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336139.8
ENST00000529691.1
ENST00000530393.6