RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF154 (Homo sapiens)

Ensembl gene IDs: ENSG00000179909

Ensembl transcript IDs: ENST00000451275.1, ENST00000512439.6, ENST00000684351.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACACATTTGGCCCAGGAACTGCTAACGAATGTACAGTGCAGTGGTaGTTCAAGAAGTTTTGCAAAGGAGACAAGAGCCTTGAAGAGAAG +
Preference number: 1 (lower is better)
Translates to: NTFGPGTANECTVQW*FKKFCKGDKSLEEK
Trigger: CTTCTCTTCAAGGCTCTTGTCTCCTTTGCAAAACTTCTTGAACCACCACTGCACTGTACATTCGTTAGCAGTTCCTGGGCCAAATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR CCA 90 bp ATAAACACATTTGGCCCAGGAACTGCTAACGAATGTACAGTGCAGTaGTGGTTCAAGAAGTTTTGCAAAGGAGACAAGAGCCTTGAAGAG +
Preference number: 1 (lower is better)
Translates to: INTFGPGTANECTVQ*WFKKFCKGDKSLEE
Trigger: CTCTTCAAGGCTCTTGTCTCCTTTGCAAAACTTCTTGAACCACCACTGCACTGTACATTCGTTAGCAGTTCCTGGGCCAAATGTGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR TCA 90 bp TATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGTaGACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTT +
Preference number: 1 (lower is better)
Translates to: YINWTSLHIKSVFPL*TVWHSMRYGLQLKL
Trigger: AAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR CCA 90 bp GGATGCTATCAGCAACTCTTCCCAATTCTACATTCAGTAACATGTTaGCAGTTTCAAAATTGGCATGGTGGGAGCAATTACAGGTTAATA +
Preference number: 1 (lower is better)
Translates to: GCYQQLFPILHSVTC*QFQNWHGGSNYRLI
Trigger: TATTAACCTGTAATTGCTCCCACCATGCCAATTTTGAAACTGCCAACATGTTACTGAATGTAGAATTGGGAAGAGTTGCTGATAGCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGCTGCCTCCTCAGGCTaGCCTCTATGGCATCCAGGA +
Preference number: 2 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWAASSG*PLWHPG
Trigger: TCCTGGATGCCATAGAGGTCAGCCTGAGGAGGCAGC...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGCTCAGATGGGCGTGGTaGCGGGTGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWLRWAW*RVPVIP
Trigger: TGGGATTACAGGCACCCGCCACCACGCCCATCTGAG...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGAGGAGACAAGAGCCTTaGAGAGAAGTAGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWRRQEP*REVVAS
Trigger: GCTGGCCACTACTTCTCTTCAAGGCTCTTGTCTCCT...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGAGGAAATTGGAATGGTaGAAAAGCTTGGCTGGGCGC +
Preference number: 2 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWRKLEW*KSLAGR
Trigger: GCGCCCAGCCAAGCTTTTTCACCATTCCAATTTCCT...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGATATGGCCTTCAGCTaGAGCTTTCTGACATTCACT +
Preference number: 2 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWDMAFS*SFLTFT
Trigger: AGTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATC...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CCA 90 bp TCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGGCACTCAATGAGATATaGCCTTCAGCTGAAGCTTTC +
Preference number: 2 (lower is better)
Translates to: STSRGSNNSRASGSPVAGALNEI*PSAEAF
Trigger: GAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGC...CCCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp TCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGTCAGCTGAAGCTTTCTaGCATTCACTGTGTACTCAA +
Preference number: 2 (lower is better)
Translates to: STSRGSNNSRASGSPVAGSAEAF*HSLCTQ
Trigger: TTGAGTACACAGTGAATGTCAGAAAGCTTCAGCTGA...CCCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR GCA 90 bp TGGCTGGATCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGACACTGGTGGTCACCTaGCAGGCAGTAGAGGTAAAA +
Preference number: 2 (lower is better)
Translates to: WLDHKGCINGLDLPSLSLTLVVT*QAVEVK
Trigger: TTTTACCTCTACTGCCTGGCAGGTGACCACCAGTGT...CAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGATCCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAAGTGAGTGGTGCACACTaGTGGTCACCTGCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQVSGAH*WSPARQ
Trigger: CTGCCTGGCAGGTGACCACCAGTGTGCACCACTCAC...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAAACTGGGATGGGTGAGTaGTGCACACTGGTGGTCACC +
Preference number: 2 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQTGMGE*CTLVVT
Trigger: GGTGACCACCAGTGTGCACCACTCACCCATCCCAGT...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAACTGAATACACTGGGATaGGTGAGTGGTGCACACTGG +
Preference number: 2 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQLNTLG*VSGAHW
Trigger: CCAGTGTGCACCACTCACCCATCCCAGTGTATTCAG...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR-3UTR TCA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGGCAATGACCTTGAGGTaGAAATCCCAGAGGCTACAG +
Preference number: 2 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLAMTLR*KSQRLQ
Trigger: CTGTAGCCTCTGGGATTTTCACCTCAAGGTCATTGC...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR GCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAACACTGGTGGTCACCTaGCAGGCAGTAGAGGTAAAA +
Preference number: 2 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQTLVVT*QAVEVK
Trigger: TTTTACCTCTACTGCCTGGCAGGTGACCACCAGTGT...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR-3UTR TCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAATGTTCAATTCAGGCTaGTGCCACCCTCATAAGGGA +
Preference number: 2 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQMFNSG*CHPHKG
Trigger: TCCCTTATGAGGGTGGCATCAGCCTGAATTGAACAT...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR-3UTR TCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAATTCCCCCACTGGCACTaGACACGATGCAGTATTCCT +
Preference number: 2 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQFPHWH*TRCSIP
Trigger: AGGAATACTGCATCGTGTTCAGTGCCAGTGGGGGAA...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAGATATGGCCTTCAGCTaGAGCTTTCTGACATTCACT +
Preference number: 2 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQDMAFS*SFLTFT
Trigger: AGTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATC...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR-3UTR TCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAACCACAGTTGGTGATTTaGAGGCTGGCAAACTCTATC +
Preference number: 2 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQPQLVI*RLANSI
Trigger: GATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGG...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR GCA 90 bp AAGAGCCATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATGGGCAGGGCAAAAGGTaGAATGCAGTTCACACATAC +
Preference number: 2 (lower is better)
Translates to: KSHNNEHHGNLCKRGTFYGQGKR*NAVHTY
Trigger: GTATGTGTGAACTGCATTGCACCTTTTGCCCTGCCC...ATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATGGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR GCA 90 bp AGTAGTGGCCAGCCACTGGAAGTTGACAATGACCAATTGAGAGCAATATTAGAACCTGGGAGAGGATTTTaGCTCAGTGATCACAAATAC +
Preference number: 2 (lower is better)
Translates to: SSGQPLEVDNDQLRAILEPGRGF*LSDHKY
Trigger: GTATTTGTGATCACTGAGGCAAAATCCTCTCCCAGG...TTCTAATATTGCTCTCAATTGGTCATTGTCAACTTCCAGTGGCTGGCCACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR GCA 90 bp CATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTATTGAGGATGTCAAGTAACTaGTGCCTCCTCAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: HNNEHHGNLCKRGTFYLLRMSSN*CLLRLT
Trigger: GGTCAGCCTGAGGAGGCAGCAGTTACTTGACATCCT...CAATAAATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CCA 90 bp GATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCGCACTCAATGAGATATaGCCTTCAGCTGAAGCTTTC +
Preference number: 2 (lower is better)
Translates to: DLLQSCYINWTSLHIKSVALNEI*PSAEAF
Trigger: GAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGC...GACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR-3UTR CCA 90 bp AGTAGTGGCCAGCCACTGGAAGTTGACAATGACCAATTGAGAGCAATATTAGAAGGAGAAAGGTTCATCTaGCTTCATAACAGTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SSGQPLEVDNDQLRAILEGERFI*LHNSLF
Trigger: GAAAAGACTGTTATGAAGCCAGATGAACCTTTCTCC...TTCTAATATTGCTCTCAATTGGTCATTGTCAACTTCCAGTGGCTGGCCACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR CAA 90 bp AGGATGCTATCAGCAACTCTTCCCAATTCTACATTCAGTAACATGTaGGCAGTTTCAAAATTGGCATGGTGGGAGCAATTACAGGTTAAT +
Preference number: 2 (lower is better)
Translates to: RMLSATLPNSTFSNM*AVSKLAWWEQLQVN
Trigger: ATTAACCTGTAATTGCTCCCACCATGCCAATTTTGAAACTGCCAACATGTTACTGAATGTAGAATTGGGAAGAGTTGCTGATAGCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp CATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTATTGAGTGTCTTTCCCTTGTaGACTGTGTGGCACTCAATG +
Preference number: 2 (lower is better)
Translates to: HNNEHHGNLCKRGTFYLLSVFPL*TVWHSM
Trigger: CATTGAGTGCCACACAGTTCACAAGGGAAAGACACT...CAATAAATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CCA 90 bp TTCAAACCAACCCATACATATAGAACCCCCAAGATTAATAAGGCCTTTGTTATTGCAATAAGAGGCAGTTaGTTCCCACAGTTGGTGATT +
Preference number: 2 (lower is better)
Translates to: FKPTHTYRTPKINKAFVIAIRGS*FPQLVI
Trigger: AATCACCAACTGTGGGAACCAACTGCCTCTTATTGC...AATAACAAAGGCCTTATTAATCTTGGGGGTTCTATATGTATGGGTTGGTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR TCA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTCTATCAAGAGTCATGTaGGACCAACAATATCCTGAA +
Preference number: 2 (lower is better)
Translates to: TIIIPTIILPPVVLPCGILSRVM*DQQYPE
Trigger: TTCAGGATATTGTTGGTCTCACATGACTCTTGATAG...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR GCA 90 bp CAGAAGGAAACTGCGTTCCAGGGTGTAAGCATGTATGAAAATATCAAAATATGCAACTACATGAGAAGTTaGCTAAGAACTCAATGTCAA +
Preference number: 2 (lower is better)
Translates to: QKETAFQGVSMYENIKICNYMRS*LRTQCQ
Trigger: TTGACATTGAGTTCTTAGGCAACTTCTCATGTAGTT...GCATATTTTGATATTTTCATACATGCTTACACCCTGGAACGCAGTTTCCTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CAA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGCTGTCCCTGTCCCTGTaGAGCTACACAATGTTTGGG +
Preference number: 3 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWLSLSL*SYTMFG
Trigger: CCCAAACATTGTGTAGCTCAACAGGGACAGGGACAG...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR CCA 72 bp TCAGGTCCATGGCCTGAATACACTGGGATGGGTGAGTaGTGCACACTGGTGGTCACCTGCCAGGCAGTAGAG +
Preference number: 3 (lower is better)
Translates to: SGPWPEYTGMGE*CTLVVTCQAVE
Trigger: CTCTACTGCCTGGCAGGTGACCACCAGTGTGCACCACTCACCCATCCCAGTGTATTCAGGCCATGGACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR CCA 72 bp AAACTGGGTCAGGTCCATGGCCTGAATACACTGGGATaGGTGAGTGGTGCACACTGGTGGTCACCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: KLGQVHGLNTLG*VSGAHWWSPAR
Trigger: CCTGGCAGGTGACCACCAGTGTGCACCACTCACCCATCCCAGTGTATTCAGGCCATGGACCTGACCCAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR CCA 72 bp GGCCCAGGAACTGCTAACGAATGTACAGTGCAGTGGTaGTTCAAGAAGTTTTGCAAAGGAGACAAGAGCCTT +
Preference number: 3 (lower is better)
Translates to: GPGTANECTVQW*FKKFCKGDKSL
Trigger: AAGGCTCTTGTCTCCTTTGCAAAACTTCTTGAACCACCACTGCACTGTACATTCGTTAGCAGTTCCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR-3UTR CAA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGCCCACAGTTGGTGATTaGAAGGCTGGCAAACTCTAT +
Preference number: 3 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLPTVGD*KAGKLY
Trigger: ATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGG...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR GCA 72 bp TGCTTTCAGAAACATCAAAGGATGTCAAGTAACTGCTaGCTCCTCAGGCTGACCTCTATGGCATCCAGGATA +
Preference number: 3 (lower is better)
Translates to: CFQKHQRMSSNC*LLRLTSMASRI
Trigger: TATCCTGGATGCCATAGAGGTCAGCCTGAGGAGGCAGCAGTTACTTGACATCCTTTGATGTTTCTGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR GCA 72 bp ACACATTTGGCCCAGGAACTGCTAACGAATGTACAGTaGAGTGGTGGTTCAAGAAGTTTTGCAAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: THLAQELLTNVQ*SGGSRSFAKET
Trigger: TGTCTCCTTTGCAAAACTTCTTGAACCACCACTGCACTGTACATTCGTTAGCAGTTCCTGGGCCAAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR CCA 72 bp ACAGAAATGTTGGCTGGATCACAAAGGCTGTATCAATaGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: TEMLAGSQRLYQ*PRPPFSILVFL
Trigger: CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGATCCAGCCAACATTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR TCA 72 bp TGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGTaGACTGTGTGGCACTCAATGAGATATGGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: WTSLHIKSVFPL*TVWHSMRYGLQ
Trigger: CTGAAGGCCATATCTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGATGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR CCA 72 bp CAGCAACTCTTCCCAATTCTACATTCAGTAACATGTTaGCAGTTTCAAAATTGGCATGGTGGGAGCAATTAC +
Preference number: 3 (lower is better)
Translates to: QQLFPILHSVTC*QFQNWHGGSNY
Trigger: GTAATTGCTCCCACCATGCCAATTTTGAAACTGCCAACATGTTACTGAATGTAGAATTGGGAAGAGTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR TCA 72 bp ATAGTTGCCTATAGGCAGATAATTATTAAAGGACAATaGGGTAACTTGTGGAATGACACGTTCATTGTCATG +
Preference number: 3 (lower is better)
Translates to: IVAYRQIIIKGQ*GNLWNDTFIVM
Trigger: CATGACAATGAACGTGTCATTCCACAAGTTACCTCATTGTCCTTTAATAATTATCTGCCTATAGGCAACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGCGAACTCGTGACCTGTaGTCCACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWRTRDL*STHLGL
Trigger: GAGGCCGAGGTGGGTGGATCACAGGTCACGAGTTCG...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGTTGGCGTCCTCAGAGTaGCCGCTGCCATCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWLASSE*PLPSDS
Trigger: AGAGTCTGATGGCAGCGGCCACTCTGAGGACGCCAA...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGTTTTTCCTCTGTGACTaGTGGCCCCACCGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWFFLCD*WPHRRF
Trigger: AAAGCGACGGTGGGGCCATCAGTCACAGAGGAAAAA...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGAGTGTCTTTCCCTTGTaGACTGTGTGGCACTCAATG +
Preference number: 4 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWSVFPL*TVWHSM
Trigger: CATTGAGTGCCACACAGTTCACAAGGGAAAGACACT...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp TCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGAAGGCCATTTCCACCTaGCTCAACAGAAATGTTGGC +
Preference number: 4 (lower is better)
Translates to: STSRGSNNSRASGSPVAGKAIST*LNRNVG
Trigger: GCCAACATTTCTGTTGAGTCAGGTGGAAATGGCCTT...CCCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp TCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGGATATGGCCTTCAGCTaGAGCTTTCTGACATTCACT +
Preference number: 4 (lower is better)
Translates to: STSRGSNNSRASGSPVAGDMAFS*SFLTFT
Trigger: AGTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATC...CCCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp TCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGAAGACAGAAGGAAACTaGGTTCCAGGGTGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: STSRGSNNSRASGSPVAGKTEGN*VPGCKH
Trigger: ATGCTTACACCCTGGAACGCAGTTTCCTTCTGTCTT...CCCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGGCTGCCTCCTCAGGCTaGCCTCTATGGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLAASSG*PLWHPG
Trigger: TCCTGGATGCCATAGAGGTCAGCCTGAGGAGGCAGC...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGAGGTGCATGCCACTATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWRCMPL*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATAGTGGCATGCACCT...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp CCTCATGTCCTGGGAGAGGATTTTGCCTCAGTGATCACAAATACAAGTGAACAGGTGAGTGGTGCACACTaGTGGTCACCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PHVLGEDFASVITNTSEQVSGAH*WSPARQ
Trigger: CTGCCTGGCAGGTGACCACCAGTGTGCACCACTCAC...CTGTTCACTTGTATTTGTGATCACTGAGGCAAAATCCTCTCCCAGGACATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACCCTTCCCAACTTCTCTaGAGGTGGAAGGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHPSQLL*RWKAPL
Trigger: CAGGGGAGCCTTCCACCTGCAGAGAAGTTGGGAAGG...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp ATCCCTACATATCAAAAGTGTCTTTCCCTTGTGAACTGTGTGGCACTCAATGAGCCTCAGAGTGGCCGCTaGCATCAGACTCTGCGGGTA +
Preference number: 4 (lower is better)
Translates to: IPTYQKCLSLVNCVALNEPQSGR*HQTLRV
Trigger: TACCCGCAGAGTCTGATGGCAGCGGCCACTCTGAGG...CTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAAGGGATGGGTGAGTGGTaGACACTGGTGGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQGMGEW*TLVVTC
Trigger: GCAGGTGACCACCAGTGTGCACCACTCACCCATCCC...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp GATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCCACAGTGCCCTGAGTTaGCGTCCTCAGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: DLLQSCYINWTSLHIKSVHSALS*RPQSGR
Trigger: GCGGCCACTCTGAGGACGCCAACTCAGGGCACTGTG...GACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGCACAGTGCCCTGAGTTaGCGTCCTCAGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKHSALS*RPQSGR
Trigger: GCGGCCACTCTGAGGACGCCAACTCAGGGCACTGTG...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAACTCAGATGGGCGTGGTaGCGGGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQLRWAW*RVPVIP
Trigger: TGGGATTACAGGCACCCGCCACCACGCCCATCTGAG...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp TGGCTGGATCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGATGTTCAATTCAGGCTaGTGCCACCCTCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: WLDHKGCINGLDLPSLSLMFNSG*CHPHKG
Trigger: TCCCTTATGAGGGTGGCATCAGCCTGAATTGAACAT...CAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGATCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGCCTCAGAGTGGCCGCTaGCATCAGACTCTGCGGGTA +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKPQSGR*HQTLRV
Trigger: TACCCGCAGAGTCTGATGGCAGCGGCCACTCTGAGG...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGGGGATGGGTGAGTGGTaGACACTGGTGGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLGMGEW*TLVVTC
Trigger: GCAGGTGACCACCAGTGTGCACCACTCACCCATCCC...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp GATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCGTGAGTGGTGCACACTaGTGGTCACCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: DLLQSCYINWTSLHIKSVVSGAH*WSPARQ
Trigger: CTGCCTGGCAGGTGACCACCAGTGTGCACCACTCAC...GACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp ATCCCTACATATCAAAAGTGTCTTTCCCTTGTGAACTGTGTGGCACTCAATGAGACTGGGATGGGTGAGTaGTGCACACTGGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: IPTYQKCLSLVNCVALNETGMGE*CTLVVT
Trigger: GGTGACCACCAGTGTGCACCACTCACCCATCCCAGT...CTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR CAA 72 bp GGTGGTTCAAGAAGTTTTGCAAAGGAGACAAGAGCCTaGAAGAGAAGTAGTGGCCAGCCACTGGAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: GGSRSFAKETRA*KRSSGQPLEVD
Trigger: GTCAACTTCCAGTGGCTGGCCACTACTTCTCTTCAAGGCTCTTGTCTCCTTTGCAAAACTTCTTGAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACCTATCTCTGATCCGGTaGACACACCTCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHLSLIR*THLREA
Trigger: AGCTTCTCTGAGGTGTGTTCACCGGATCAGAGATAG...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451275.1
CDS-3UTR TCA 90 bp GATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCGGTGGAAGGCTCCCCTaGCACATGGAATGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: DLLQSCYINWTSLHIKSVGGRLP*HMECAG
Trigger: ACCTGCACATTCCATGTGTCAGGGGAGCCTTCCACC...GACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAGTCGCTTTTGCTATTTaGTTGCTCCCCAGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQVAFAI*LLPSVS
Trigger: GCTCACACTGGGGAGCAATCAAATAGCAAAAGCGAC...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACGGTTCCCACAGTTGGTaGTTTGAAGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHGSHSW*FEGWQT
Trigger: AGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACC...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp CCTCATGTCCTGGGAGAGGATTTTGCCTCAGTGATCACAAATACAAGTGAACAGTGTCCCTGTCCCTGTTaGGCTACACAATGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: PHVLGEDFASVITNTSEQCPCPC*ATQCLG
Trigger: TCCCAAACATTGTGTAGCTCAACAGGGACAGGGACA...CTGTTCACTTGTATTTGTGATCACTGAGGCAAAATCCTCTCCCAGGACATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAGCAATGACCTTGAGGTaGAAATCCCAGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQAMTLR*KSQRLQ
Trigger: CTGTAGCCTCTGGGATTTTCACCTCAAGGTCATTGC...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAAGGAAATTGGAATGGTaGAAAAGCTTGGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQRKLEW*KSLAGR
Trigger: GCGCCCAGCCAAGCTTTTTCACCATTCCAATTTCCT...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGCTGGTCTCGAACTCGTaGCCTGTGATCCACCCACCT +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKLVSNS*PVIHPP
Trigger: AGGTGGGTGGATCACAGGTCACGAGTTCGAGACCAG...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACGGGCAGGGCAAAAGGTaGAATGCAGTTCACACATAC +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHGQGKR*NAVHTY
Trigger: GTATGTGTGAACTGCATTGCACCTTTTGCCCTGCCC...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACACACTGGTGGTCACCTaGCAGGCAGTAGAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHTLVVT*QAVEVK
Trigger: TTTTACCTCTACTGCCTGGCAGGTGACCACCAGTGT...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATATTGGCGTCCTCAGAGTaGCCGCTGCCATCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLILASSE*PLPSDS
Trigger: AGAGTCTGATGGCAGCGGCCACTCTGAGGACGCCAA...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAGGAGAAATCCCAACTTaGCCAGGAAGTCCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQGEIPT*PGSPSQ
Trigger: TTGGGAAGGACTTCCTGGCCAAGTTGGGATTTCTCC...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGGCGCTCTGCTATCTCTaGTCCGGTGAACACACCTCA +
Preference number: 4 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLALCYL*SGEHTS
Trigger: TGAGGTGTGTTCACCGGATCAGAGATAGCAGAGCGC...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451275.1
CDS-3UTR TCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACAGTGTCTTTCCCTTGTaGACTGTGTGGCACTCAATG +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHSVFPL*TVWHSM
Trigger: CATTGAGTGCCACACAGTTCACAAGGGAAAGACACT...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACCCACAGTTGGTGATTTaGAGGCTGGCAAACTCTATC +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHPQLVI*RLANSI
Trigger: GATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGG...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp ATCCCTACATATCAAAAGTGTCTTTCCCTTGTGAACTGTGTGGCACTCAATGAGAGGAGACAAGAGCCTTaGAGAGAAGTAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IPTYQKCLSLVNCVALNERRQEP*REVVAS
Trigger: GCTGGCCACTACTTCTCTTCAAGGCTCTTGTCTCCT...CTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAGGGCAAAAGGTGCAATaGAGTTCACACATACCTGGA +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQGQKVQ*SSHIPG
Trigger: TCCAGGTATGTGTGAACTGCATTGCACCTTTTGCCC...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp AGTAGTGGCCAGCCACTGGAAGTTGACAATGACCAATTGAGAGCAATATTAGAAAGGATGTCAAGTAACTaGTGCCTCCTCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SSGQPLEVDNDQLRAILERMSSN*CLLRLT
Trigger: GGTCAGCCTGAGGAGGCAGCAGTTACTTGACATCCT...TTCTAATATTGCTCTCAATTGGTCATTGTCAACTTCCAGTGGCTGGCCACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACCAAAGGCTGTATCAATaGCCTAGACCTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHQRLYQ*PRPPFS
Trigger: AGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTG...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR CAA 72 bp GGCAATAAGAGGCAGTTGGTTCCCACAGTTGGTGATTaGAAGGCTGGCAAACTCTATCAAGAGTCATGTGAG +
Preference number: 4 (lower is better)
Translates to: GNKRQLVPTVGD*KAGKLYQESCE
Trigger: CTCACATGACTCTTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTTATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATATTTTTCCTCTGTGACTaGTGGCCCCACCGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLIFFLCD*WPHRRF
Trigger: AAAGCGACGGTGGGGCCATCAGTCACAGAGGAAAAA...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAGTGTGTGTTTACCGCTaGATGCTTTTGTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQVCVYR*MLLCVL
Trigger: GAGAACACACAAAAGCATTCAGCGGTAAACACACAC...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGGTGTGTGTTTACCGCTaGATGCTTTTGTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLVCVYR*MLLCVL
Trigger: GAGAACACACAAAAGCATTCAGCGGTAAACACACAC...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATAGGTGGGTGGATCACATaGAGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLIGGWIT*SQEFKT
Trigger: GGTCTTGAACTCCTGACTTCATGTGATCCACCCACC...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTCCTTCCCAACTTCTCTaGAGGTGGAAGGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TIIIPTIILPPVVLPCGIPSQLL*RWKAPL
Trigger: CAGGGGAGCCTTCCACCTGCAGAGAAGTTGGGAAGG...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATATTGCCCAGGCTGGAGTaGAGTGACATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLILPRLE*SDMILA
Trigger: AGCCAAGATCATGTCACTGCACTCCAGCCTGGGCAA...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATAGGCTCCCCTGACACATaGAATGTGCAGGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLIGSPDT*NVQVFT
Trigger: TGTGAAGACCTGCACATTCCATGTGTCAGGGGAGCC...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGCAACTTCTCTGCAGGTaGAAGGCTCCCCTGACACAT +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKQLLCR*KAPLTH
Trigger: ATGTGTCAGGGGAGCCTTCCACCTGCAGAGAAGTTG...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGCTGAATACACTGGGATaGGTGAGTGGTGCACACTGG +
Preference number: 4 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLLNTLG*VSGAHW
Trigger: CCAGTGTGCACCACTCACCCATCCCAGTGTATTCAG...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACGCAATAAGAGGCAGTTaGTTCCCACAGTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHAIRGS*FPQLVI
Trigger: AATCACCAACTGTGGGAACCAACTGCCTCTTATTGC...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGGCAATAAGAGGCAGTTaGTTCCCACAGTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLAIRGS*FPQLVI
Trigger: AATCACCAACTGTGGGAACCAACTGCCTCTTATTGC...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp CAGAAGGAAACTGCGTTCCAGGGTGTAAGCATGTATGAAAATATCAAAATATGCAAACTCAGATGGGCGTaGTGGCGGGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: QKETAFQGVSMYENIKICKLRWA*WRVPVI
Trigger: GATTACAGGCACCCGCCACCACGCCCATCTGAGTTT...GCATATTTTGATATTTTCATACATGCTTACACCCTGGAACGCAGTTTCCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp AGTAGTGGCCAGCCACTGGAAGTTGACAATGACCAATTGAGAGCAATATTAGAAGGCCTGGATCCACTGTaGACTTTCTGGTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: SSGQPLEVDNDQLRAILEGLDPL*TFWCFM
Trigger: CATAAAACACCAGAAAGTTCACAGTGGATCCAGGCC...TTCTAATATTGCTCTCAATTGGTCATTGTCAACTTCCAGTGGCTGGCCACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp ATCCCTACATATCAAAAGTGTCTTTCCCTTGTGAACTGTGTGGCACTCAATGAGCCACAGTTGGTGATTTaGAGGCTGGCAAACTCTATC +
Preference number: 4 (lower is better)
Translates to: IPTYQKCLSLVNCVALNEPQLVI*RLANSI
Trigger: GATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGG...CTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTTGGAGTGCAGTGGCGTaGTCTTGGCTCACTGTGACT +
Preference number: 4 (lower is better)
Translates to: TIIIPTIILPPVVLPCGIWSAVA*SWLTVT
Trigger: AGTCACAGTGAGCCAAGATCACGCCACTGCACTCCA...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGGGGCAGGGCAAAAGGTaGAATGCAGTTCACACATAC +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKGQGKR*NAVHTY
Trigger: GTATGTGTGAACTGCATTGCACCTTTTGCCCTGCCC...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp ATCCCTACATATCAAAAGTGTCTTTCCCTTGTGAACTGTGTGGCACTCAATGAGGAGAGAGCTATATTCTaGCATCCTACTGTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: IPTYQKCLSLVNCVALNEERAIF*HPTVPV
Trigger: GACAGGGACAGTAGGATGGCAGAATATAGCTCTCTC...CTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATATCTTACCACCTGTGGTaGTACCCTGTGGAATTCAGG +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLISYHLW*YPVEFR
Trigger: CCTGAATTCCACAGGGTAGCACCACAGGTGGTAAGA...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATAGGAGAAATCCCAACTTaGCCAGGAAGTCCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLIGEIPT*PGSPSQ
Trigger: TTGGGAAGGACTTCCTGGCCAAGTTGGGATTTCTCC...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp TTCAAACCAACCCATACATATAGAACCCCCAAGATTAATAAGGCCTTTGTTATTACTGGGATGGGTGAGTaGTGCACACTGGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: FKPTHTYRTPKINKAFVITGMGE*CTLVVT
Trigger: GGTGACCACCAGTGTGCACCACTCACCCATCCCAGT...AATAACAAAGGCCTTATTAATCTTGGGGGTTCTATATGTATGGGTTGGTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACATAGTGAAGGAAGACTaGAGAAAGGTTCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHIVKED*RKVHLA
Trigger: AGCCAGATGAACCTTTCTCCAGTCTTCCTTCACTAT...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGATAGTGAAGGAAGACTaGAGAAAGGTTCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLIVKED*RKVHLA
Trigger: AGCCAGATGAACCTTTCTCCAGTCTTCCTTCACTAT...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAATGTGGTGCTACCCTGTaGAATTCAGGATATCAAGGC +
Preference number: 4 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQCGATL*NSGYQG
Trigger: GCCTTGATATCCTGAATTCCACAGGGTAGCACCACA...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAACTCAACAGAAATGTTaGCTGGATCACAAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQTQQKC*LDHKGC
Trigger: ACAGCCTTTGTGATCCAGCCAACATTTCTGTTGAGT...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR CAA 72 bp GAACTCAATGTCAACCATTCCACGGCTGTTCAGCATTaGAAGGAAATTGGAATGGTGAAAAAGCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELNVNHSTAVQH*KEIGMVKKLGW
Trigger: CCAGCCAAGCTTTTTCACCATTCCAATTTCCTTCAAATGCTGAACAGCCGTGGAATGGTTGACATTGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGGGCCTGGATCCACTGTaGACTTTCTGGTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKGLDPL*TFWCFM
Trigger: CATAAAACACCAGAAAGTTCACAGTGGATCCAGGCC...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATAATGTTCAATTCAGGCTaGTGCCACCCTCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLIMFNSG*CHPHKG
Trigger: TCCCTTATGAGGGTGGCATCAGCCTGAATTGAACAT...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGCTATCAAGAGTCATGTaGGACCAACAATATCCTGAA +
Preference number: 4 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLLSRVM*DQQYPE
Trigger: TTCAGGATATTGTTGGTCTCACATGACTCTTGATAG...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGAGCCATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATGGTTCCCACAGTTGGTaGTTTGAAGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: KSHNNEHHGNLCKRGTFYGSHSW*FEGWQT
Trigger: AGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACC...ATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATGGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTTTCCCCCACTGGCACTaGACACGATGCAGTATTCCT +
Preference number: 4 (lower is better)
Translates to: TIIIPTIILPPVVLPCGIFPHWH*TRCSIP
Trigger: AGGAATACTGCATCGTGTTCAGTGCCAGTGGGGGAA...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACTTGGAAAATCAGGTTTaGCAACCCTATGTTGATTCC +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHLENQV*QPYVDS
Trigger: GGAATCAACATAGGGTTGTCAAACCTGATTTTCCAA...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp CAGAAGGAAACTGCGTTCCAGGGTGTAAGCATGTATGAAAATATCAAAATATGCCTGGTCTCTAACTCCTaGCCTTGTGATCCACCTACT +
Preference number: 4 (lower is better)
Translates to: QKETAFQGVSMYENIKICLVSNS*PCDPPT
Trigger: AGTAGGTGGATCACAAGGTCAGGAGTTAGAGACCAG...GCATATTTTGATATTTTCATACATGCTTACACCCTGGAACGCAGTTTCCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGGGGCAAAAGGTGCAATaGAGTTCACACATACCTGGA +
Preference number: 4 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLGQKVQ*SSHIPG
Trigger: TCCAGGTATGTGTGAACTGCATTGCACCTTTTGCCC...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp TGGCTGGATCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGAACTACATGAGAAGTTaGCTAAGAACTCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: WLDHKGCINGLDLPSLSLNYMRS*LRTQCQ
Trigger: TTGACATTGAGTTCTTAGGCAACTTCTCATGTAGTT...CAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGATCCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACTGGTTCAAGAAGTTTTaGAAAGGAGACAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHWFKKF*KGDKSL
Trigger: AAGGCTCTTGTCTCCTTTGCAAAACTTCTTGAACCA...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp AAGAGCCATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTCAAACAATTCTCGTaGCTCAGGCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KSHNNEHHGNLCKRGTFYFKQFS*LRLPSS
Trigger: GCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAA...ATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATGGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGGGTGTTTTCGGAGACTaGAGCTGTAGGGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLGVFGD*SCRERT
Trigger: AGTTCTTTCCCTACAGCTCCAGTCTCCGAAAACACC...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATAGGTGTTTTCGGAGACTaGAGCTGTAGGGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLIGVFGD*SCRERT
Trigger: AGTTCTTTCCCTACAGCTCCAGTCTCCGAAAACACC...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAAACAGAAATGTTGGCTaGATCACAAAGGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQNRNVG*ITKAVS
Trigger: TGATACAGCCTTTGTGATCCAGCCAACATTTCTGTT...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp ATCCCTACATATCAAAAGTGTCTTTCCCTTGTGAACTGTGTGGCACTCAATGAGTCAGCTGAAGCTTTCTaGCATTCACTGTGTACTCAA +
Preference number: 4 (lower is better)
Translates to: IPTYQKCLSLVNCVALNESAEAF*HSLCTQ
Trigger: TTGAGTACACAGTGAATGTCAGAAAGCTTCAGCTGA...CTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATAGATATGGCCTTCAGCTaGAGCTTTCTGACATTCACT +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLIDMAFS*SFLTFT
Trigger: AGTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATC...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTATGTCAAGTAACTGCTaGCTCCTCAGGCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: TIIIPTIILPPVVLPCGIMSSNC*LLRLTS
Trigger: AGAGGTCAGCCTGAGGAGGCAGCAGTTACTTGACAT...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp TCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGTTTTCCTGCAGAATATATTAGGATaGTATCAGCAACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SQRLYQWPRPPFSILVFLQNILG*YQQLFP
Trigger: TGGGAAGAGTTGCTGATAGCATCCTAATATATTCTG...CAGGAAAACAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp CATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTATTGCAACTTCTCTGCAGGTaGAAGGCTCCCCTGACACAT +
Preference number: 4 (lower is better)
Translates to: HNNEHHGNLCKRGTFYLLQLLCR*KAPLTH
Trigger: ATGTGTCAGGGGAGCCTTCCACCTGCAGAGAAGTTG...CAATAAATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGGCACTCAATGAGATATaGCCTTCAGCTGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKALNEI*PSAEAF
Trigger: GAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGC...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAATGGCAGTTTCAAAATTaGCATGGTGGGAGCAATTAC +
Preference number: 4 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQWQFQN*HGGSNY
Trigger: GTAATTGCTCCCACCATGCCAATTTTGAAACTGCCA...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp CATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTATTGGTCGCTTTTGCTATTTaGTTGCTCCCCAGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HNNEHHGNLCKRGTFYLLVAFAI*LLPSVS
Trigger: GCTCACACTGGGGAGCAATCAAATAGCAAAAGCGAC...CAATAAATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp ATCCCTACATATCAAAAGTGTCTTTCCCTTGTGAACTGTGTGGCACTCAATGAGCTATCAAGAGTCATGTaGGACCAACAATATCCTGAA +
Preference number: 4 (lower is better)
Translates to: IPTYQKCLSLVNCVALNELSRVM*DQQYPE
Trigger: TTCAGGATATTGTTGGTCTCACATGACTCTTGATAG...CTCATTGAGTGCCACACAGTTCACAAGGGAAAGACACTTTTGATATGTAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp AAGAGCCATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTGACAACCCTATGTTaGTTCCACCATCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSHNNEHHGNLCKRGTFYLTTLC*FHHLSP
Trigger: AGGAGAGAGATGGTGGAATCAACATAGGGTTGTCAA...ATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATGGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp AGTAGTGGCCAGCCACTGGAAGTTGACAATGACCAATTGAGAGCAATATTAGAATATTTTCTACATTCTTaGGGTTATTCGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SSGQPLEVDNDQLRAILEYFLHS*GYSWPL
Trigger: CAGTGGCCACGAATAACCTCAAGAATGTAGAAAATA...TTCTAATATTGCTCTCAATTGGTCATTGTCAACTTCCAGTGGCTGGCCACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGGTGTTTACCGCTGAATaGTTTTGTGTGTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKVFTAE*FCVFST
Trigger: TGTGGAGAACACACAAAAGCATTCAGCGGTAAACAC...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR TCA 90 bp CAGAAGGAAACTGCGTTCCAGGGTGTAAGCATGTATGAAAATATCAAAATATGCTCAGCTGAAGCTTTCTaGCATTCACTGTGTACTCAA +
Preference number: 4 (lower is better)
Translates to: QKETAFQGVSMYENIKICSAEAF*HSLCTQ
Trigger: TTGAGTACACAGTGAATGTCAGAAAGCTTCAGCTGA...GCATATTTTGATATTTTCATACATGCTTACACCCTGGAACGCAGTTTCCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGTTTTCTCAGAGGCCTTaGATAGCAATGAAAACTAGG +
Preference number: 4 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLFSQRP*IAMKTR
Trigger: CCTAGTTTTCATTGCTATTCAAGGCCTCTGAGAAAA...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGGGAGAAAGGTTCATCTaGCTTCATAACAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKGERFI*LHNSLF
Trigger: GAAAAGACTGTTATGAAGCCAGATGAACCTTTCTCC...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGGGAGAAAGGTTCATCTaGCTTCATAACAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLGERFI*LHNSLF
Trigger: GAAAAGACTGTTATGAAGCCAGATGAACCTTTCTCC...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
3UTR CAA 72 bp TCAGCAACTCTTCCCAATTCTACATTCAGTAACATGTaGGCAGTTTCAAAATTGGCATGGTGGGAGCAATTA +
Preference number: 4 (lower is better)
Translates to: SATLPNSTFSNM*AVSKLAWWEQL
Trigger: TAATTGCTCCCACCATGCCAATTTTGAAACTGCCAACATGTTACTGAATGTAGAATTGGGAAGAGTTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR TCA 90 bp CAGAAGGAAACTGCGTTCCAGGGTGTAAGCATGTATGAAAATATCAAAATATGCAGGATTTTGCCTCAGTaGTCACAAATACAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: QKETAFQGVSMYENIKICRILPQ*SQIQVN
Trigger: GTTCACTTGTATTTGTGATCACTGAGGCAAAATCCT...GCATATTTTGATATTTTCATACATGCTTACACCCTGGAACGCAGTTTCCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR GCA 90 bp CATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTATTGCCTGGGAGAGGATTTTaGCTCAGTGATCACAAATAC +
Preference number: 4 (lower is better)
Translates to: HNNEHHGNLCKRGTFYLLPGRGF*LSDHKY
Trigger: GTATTTGTGATCACTGAGGCAAAATCCTCTCCCAGG...CAATAAATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAACATTCAGTAACATGTTaGCAGTTTCAAAATTGGCAT +
Preference number: 4 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQHSVTC*QFQNWH
Trigger: ATGCCAATTTTGAAACTGCCAACATGTTACTGAATG...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CCA 90 bp TTATGCAGATGTTCAGATATAGGATGTTCAATTCAGGCTGATGCCACCCTCATAAGCTGTTATATCAACTaGACATCCCTACATATCAAA +
Preference number: 4 (lower is better)
Translates to: LCRCSDIGCSIQADATLISCYIN*TSLHIK
Trigger: TTTGATATGTAGGGATGTCCAGTTGATATAACAGCT...TATGAGGGTGGCATCAGCCTGAATTGAACATCCTATATCTGAACATCTGCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CCA 90 bp GATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCAGCTGTTATATCAACTaGACATCCCTACATATCAAA +
Preference number: 4 (lower is better)
Translates to: DLLQSCYINWTSLHIKSVSCYIN*TSLHIK
Trigger: TTTGATATGTAGGGATGTCCAGTTGATATAACAGCT...GACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR GCA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTTTATTGCAGTGTTATTaGAGTTTTCCACTCTCTATC +
Preference number: 4 (lower is better)
Translates to: TIIIPTIILPPVVLPCGILLQCY*SFPLSI
Trigger: GATAGAGAGTGGAAAACTGCAATAACACTGCAATAA...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
3UTR CAA 72 bp AATTCTACATTCAGTAACATGTTGGCAGTTTCAAAATaGGCATGGTGGGAGCAATTACAGGTTAATATGAAT +
Preference number: 4 (lower is better)
Translates to: NSTFSNMLAVSK*AWWEQLQVNMN
Trigger: ATTCATATTAACCTGTAATTGCTCCCACCATGCCAATTTTGAAACTGCCAACATGTTACTGAATGTAGAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS TCA 90 bp GCGACATTGGTAGGGACCCGGGGACAGCGGTCCCTATCCCAGGCCTaGCGTGGGTCCCCCAGGGCGGCGTCGCCAAGGCTTAGACGCTTT +
Preference number: 5 (lower is better)
Translates to: ATLVGTRGQRSLSQA*RGSPRAASPRLRRF
Trigger: AAAGCGTCTAAGCCTTGGCGACGCCGCCCTGGGGGACCCACGTCAGGCCTGGGATAGGGACCGCTGTCCCCGGGTCCCTACCAATGTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000451275.1
ENST00000512439.6
ENST00000684351.1
CDS GCA 90 bp TTCAAAGGTCACAGTGCCCTGAGTTGGCGTCCTCAGAGTGGCCGCTaGCATCAGACTCTGCGGGTAGAGCTGGGCCGGGAGCGACGGGCG +
Preference number: 5 (lower is better)
Translates to: FKGHSALSWRPQSGR*HQTLRVELGRERRA
Trigger: CGCCCGTCGCTCCCGGCCCAGCTCTACCCGCAGAGTCTGATGGCAGCGGCCACTCTGAGGACGCCAACTCAGGGCACTGTGACCTTTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451275.1
ENST00000512439.6
ENST00000684351.1
CDS-3UTR CAA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGGAGCGACGGGCGACATaGGTAGGGACCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWERRAT*VGTRGQ
Trigger: CTGTCCCCGGGTCCCTACCAATGTCGCCCGTCGCTC...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS CCA 90 bp CCTCACCTTGGAAAGAAATCAGGGCTCCAACTAGAGCTGCCTTGCTaGAAGCTCGCACTGTCCTGTCCCGATGTATCATCCAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PHLGKKSGLQLELPC*KLALSCPDVSSSSP
Trigger: GGGGCTGCTGGATGATACATCGGGACAGGACAGTGCGAGCTTCCAGCAAGGCAGCTCTAGTTGGAGCCCTGATTTCTTTCCAAGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CCA 90 bp GTAACTTGCAGGGGGAGGCCAGAGCATGAAGGCAGAGGGAGGTTTTaGGTGCAGCCTCCAAGTAGGGAATGGACAGTTTCAGTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VTCRGRPEHEGRGRF*VQPPSREWTVSVLR
Trigger: CCTCAACACTGAAACTGTCCATTCCCTACTTGGAGGCTGCACCCAAAACCTCCCTCTGCCTTCATGCTCTGGCCTCCCCCTGCAAGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS-3UTR CAA 90 bp AAGAGGCAGTTGGTTCCCACAGTTGGTGATTTGAAGGCTGGCAAACTCTATCAAGAGCGACGGGCGACATaGGTAGGGACCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: KRQLVPTVGDLKAGKLYQERRAT*VGTRGQ
Trigger: CTGTCCCCGGGTCCCTACCAATGTCGCCCGTCGCTC...TTGATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGGAACCAACTGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS GCA 90 bp TCTCCTCACCTTGGAAAGAAATCAGGGCTCCAACTAGAGCTGCCTTaGTGGAAGCTCGCACTGTCCTGTCCCGATGTATCATCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SPHLGKKSGLQLELP*WKLALSCPDVSSSS
Trigger: GCTGCTGGATGATACATCGGGACAGGACAGTGCGAGCTTCCAGCAAGGCAGCTCTAGTTGGAGCCCTGATTTCTTTCCAAGGTGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS-3UTR CAA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACTCACAGTGCCCTGAGTaGGCGTCCTCAGAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHSQCPE*ASSEWP
Trigger: CGGCCACTCTGAGGACGCCAACTCAGGGCACTGTGA...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CAA 90 bp CTCCACCTCCCGGGGTTCAAACAATTCTCGTGCCTCAGGCTCCCCAGTAGCTGGTTGGCAGTTTCAAAATaGGCATGGTGGGAGCAATTA +
Preference number: 5 (lower is better)
Translates to: LHLPGFKQFSCLRLPSSWLAVSK*AWWEQL
Trigger: TAATTGCTCCCACCATGCCAATTTTGAAACTGCCAA...CCAGCTACTGGGGAGCCTGAGGCACGAGAATTGTTTGAACCCCGGGAGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS TCA 90 bp GGTTTTGGGTGCAGCCTCCAAGTAGGGAATGGACAGTTTCAGTGTTaGGGCAGAGTGGCAAAGACAAGAGACCCACAGCACCCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: GFGCSLQVGNGQFQC*GRVAKTRDPQHPGN
Trigger: ATTTCCTGGGTGCTGTGGGTCTCTTGTCTTTGCCACTCTGCCTCAACACTGAAACTGTCCATTCCCTACTTGGAGGCTGCACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CCA 90 bp TTCACTCCCCTTCCCAAGGATACTATCATCACCCTCTCCTCACCTTaGAAAGAAATCAGGGCTCCAACTAGAGCTGCCTTGCTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: FTPLPKDTIITLSSP*KEIRAPTRAALLEA
Trigger: AGCTTCCAGCAAGGCAGCTCTAGTTGGAGCCCTGATTTCTTTCCAAGGTGAGGAGAGGGTGATGATAGTATCCTTGGGAAGGGGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS TCA 90 bp ACCACCTGCCTACCACACCTTTTGCCAGGATCCCAGAGAGTACTGTaGGCACTCCTATTCCACAAACATAAAACTGAGGTACCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: TTCLPHLLPGSQRVL*ALLFHKHKTEVPRG
Trigger: GCCTCTTGGTACCTCAGTTTTATGTTTGTGGAATAGGAGTGCTCACAGTACTCTCTGGGATCCTGGCAAAAGGTGTGGTAGGCAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS-3UTR CAA 90 bp CAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCTTTCCCTTGTCACAGTGCCCTGAGTaGGCGTCCTCAGAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: QSCYINWTSLHIKSVFPLSQCPE*ASSEWP
Trigger: CGGCCACTCTGAGGACGCCAACTCAGGGCACTGTGA...CAAGGGAAAGACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CAA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACGCCCCACCGTCGCTTTaGCTATTTGATTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHAPPSL*LFDCSP
Trigger: TGGGGAGCAATCAAATAGCAAAAGCGACGGTGGGGC...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CAA 90 bp GATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGTGTCGCTGAGATAGTGCCATaGCCCTCCAGACTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: DLLQSCYINWTSLHIKSVAEIVP*PSRLGN
Trigger: GTTGCCCAGTCTGGAGGGCAATGGCACTATCTCAGC...GACACTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CAA 90 bp TGGCTGGATCACAAAGGCTGTATCAATGGCCTAGACCTCCCTTCTCTATCCTTGGTGGTTCAAGAAGTTTaGCAAAGGAGACAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: WLDHKGCINGLDLPSLSLVVQEV*QRRQEP
Trigger: AGGCTCTTGTCTCCTTTGCAAAACTTCTTGAACCAC...CAAGGATAGAGAAGGGAGGTCTAGGCCATTGATACAGCCTTTGTGATCCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CAA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGGCCCCACCGTCGCTTTaGCTATTTGATTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKAPPSL*LFDCSP
Trigger: TGGGGAGCAATCAAATAGCAAAAGCGACGGTGGGGC...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CAA 90 bp ACTGTGTGGCACTCAATGAGATATGGCCTTCAGCTGAAGCTTTCTGACATTCACAAGGCTCTGCCCACATaGCTTCTGAAATGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: TVWHSMRYGLQLKLSDIHKALPT*LLKCFS
Trigger: AGAAAAACATTTCAGAAGCAATGTGGGCAGAGCCTT...GTGAATGTCAGAAAGCTTCAGCTGAAGGCCATATCTCATTGAGTGCCACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CAA 90 bp CAGAAGGAAACTGCGTTCCAGGGTGTAAGCATGTATGAAAATATCAAAATATGCCTGTCCCTGTCCCTGTaGAGCTACACAATGTTTGGG +
Preference number: 5 (lower is better)
Translates to: QKETAFQGVSMYENIKICLSLSL*SYTMFG
Trigger: CCCAAACATTGTGTAGCTCAACAGGGACAGGGACAG...GCATATTTTGATATTTTCATACATGCTTACACCCTGGAACGCAGTTTCCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CAA 90 bp AAGGGATCTCCTTCAGAGCTGTTATATCAACTGGACATCCCTACATATCAAAAGCCCACAGTTGGTGATTaGAAGGCTGGCAAACTCTAT +
Preference number: 5 (lower is better)
Translates to: KGSPSELLYQLDIPTYQKPTVGD*KAGKLY
Trigger: ATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGG...CTTTTGATATGTAGGGATGTCCAGTTGATATAACAGCTCTGAAGGAGATCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000512439.6
CDS-3UTR CAA 90 bp TCCCAGAGGCTACAGGATTCCATAAAATTTCTGACAATGACCTCAGCTACACAAACGGCTGTTCAGCATTaGAAGGAAATTGGAATGGTG +
Preference number: 5 (lower is better)
Translates to: SQRLQDSIKFLTMTSATQTAVQH*KEIGMV
Trigger: CACCATTCCAATTTCCTTCAAATGCTGAACAGCCGT...TTGTGTAGCTGAGGTCATTGTCAGAAATTTTATGGAATCCTGTAGCCTCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CAA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTCCCACAGTTGGTGATTaGAAGGCTGGCAAACTCTAT +
Preference number: 5 (lower is better)
Translates to: TIIIPTIILPPVVLPCGIPTVGD*KAGKLY
Trigger: ATAGAGTTTGCCAGCCTTCAAATCACCAACTGTGGG...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CAA 90 bp ACAATTATAATTCCTACTATAATCTTACCACCTGTGGTGCTACCCTGTGGAATTGACTCAACAGAAATGTaGGCTGGATCACAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: TIIIPTIILPPVVLPCGIDSTEM*AGSQRL
Trigger: CAGCCTTTGTGATCCAGCCAACATTTCTGTTGAGTC...AATTCCACAGGGTAGCACCACAGGTGGTAAGATTATAGTAGGAATTATAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CAA 90 bp AAGAGCCATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTTGACAACCCTATGTaGATTCCACCATCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: KSHNNEHHGNLCKRGTFYFDNPM*IPPSLS
Trigger: GGAGAGAGATGGTGGAATCAACATAGGGTTGTCAAA...ATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATGGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS-3UTR CAA 90 bp CATAATAACGAACATCATGGAAACCTCTGTAAAAGGGGCACATTCTATTTATTGACATTCAGTAACATGTaGGCAGTTTCAAAATTGGCA +
Preference number: 5 (lower is better)
Translates to: HNNEHHGNLCKRGTFYLLTFSNM*AVSKLA
Trigger: TGCCAATTTTGAAACTGCCAACATGTTACTGAATGT...CAATAAATAGAATGTGCCCCTTTTACAGAGGTTTCCATGATGTTCGTTATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512439.6
CDS GCA 72 bp CACAGTGCCCTGAGTTGGCGTCCTCAGAGTGGCCGCTaGCATCAGACTCTGCGGGTAGAGCTGGGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: HSALSWRPQSGR*HQTLRVELGRE
Trigger: CTCCCGGCCCAGCTCTACCCGCAGAGTCTGATGGCAGCGGCCACTCTGAGGACGCCAACTCAGGGCACTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000451275.1
ENST00000512439.6
ENST00000684351.1
CDS CCA 72 bp CGTGCAGGAGGGACGACGACTCCCCTCACGCCTTCGTaGCCCCAACTCGGCGCTCTGCTATCTCTGATCCGG +
Preference number: 6 (lower is better)
Translates to: RAGGTTTPLTPS*PQLGALLSLIR
Trigger: CCGGATCAGAGATAGCAGAGCGCCGAGTTGGGGCCACGAAGGCGTGAGGGGAGTCGTCGTCCCTCCTGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451275.1
ENST00000684351.1
CDS TCA 72 bp CGCCTTCGTGGCCCCAACTCGGCGCTCTGCTATCTCTaGTCCGGTGAACACACCTCAGAGAAGCTAAAATGG +
Preference number: 6 (lower is better)
Translates to: RLRGPNSALCYL*SGEHTSEKLKW
Trigger: CCATTTTAGCTTCTCTGAGGTGTGTTCACCGGATCAGAGATAGCAGAGCGCCGAGTTGGGGCCACGAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS TCA 72 bp CTGAGGTACCAAGAGGCTGCAAAACCAGCAGAGTCCTaGTGCTGGGCAGTGGCAGAGGAGGGATTAAACCCA +
Preference number: 6 (lower is better)
Translates to: LRYQEAAKPAES*CWAVAEEGLNP
Trigger: TGGGTTTAATCCCTCCTCTGCCACTGCCCAGCATCAGGACTCTGCTGGTTTTGCAGCCTCTTGGTACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS GCA 72 bp ATCAACTCACTAGGTGCTGGGGATAGTGCTCGGCCCTaGTTACCACCTGCCTACCACACCTTTTGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: INSLGAGDSARP*LPPAYHTFCQD
Trigger: ATCCTGGCAAAAGGTGTGGTAGGCAGGTGGTAAGCAGGGCCGAGCACTATCCCCAGCACCTAGTGAGTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CAA 90 bp CTCTCCTCACCTTGGAAAGAAATCAGGGCTCCAACTAGAGCTGCCTaGCTGGAAGCTCGCACTGTCCTGTCCCGATGTATCATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LSSPWKEIRAPTRAA*LEARTVLSRCIIQQ
Trigger: CTGCTGGATGATACATCGGGACAGGACAGTGCGAGCTTCCAGCAAGGCAGCTCTAGTTGGAGCCCTGATTTCTTTCCAAGGTGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CCA 72 bp AAGGTTCACTTACCTGAATACACTGGGATGGGTGAGTaGTGCACACTGGTGGTCACCTGCCAGGCAGTAGAG +
Preference number: 6 (lower is better)
Translates to: KVHLPEYTGMGE*CTLVVTCQAVE
Trigger: CTCTACTGCCTGGCAGGTGACCACCAGTGTGCACCACTCACCCATCCCAGTGTATTCAGGTAAGTGAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CCA 72 bp AGAACACCAAGGTTCACTTACCTGAATACACTGGGATaGGTGAGTGGTGCACACTGGTGGTCACCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RTPRFTYLNTLG*VSGAHWWSPAR
Trigger: CCTGGCAGGTGACCACCAGTGTGCACCACTCACCCATCCCAGTGTATTCAGGTAAGTGAACCTTGGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CCA 72 bp GGAAAGAAATCAGGGCTCCAACTAGAGCTGCCTTGCTaGAAGCTCGCACTGTCCTGTCCCGATGTATCATCC +
Preference number: 6 (lower is better)
Translates to: GKKSGLQLELPC*KLALSCPDVSS
Trigger: GGATGATACATCGGGACAGGACAGTGCGAGCTTCCAGCAAGGCAGCTCTAGTTGGAGCCCTGATTTCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CAA 72 bp CCTTGGAAAGAAATCAGGGCTCCAACTAGAGCTGCCTaGCTGGAAGCTCGCACTGTCCTGTCCCGATGTATC +
Preference number: 6 (lower is better)
Translates to: PWKEIRAPTRAA*LEARTVLSRCI
Trigger: GATACATCGGGACAGGACAGTGCGAGCTTCCAGCAAGGCAGCTCTAGTTGGAGCCCTGATTTCTTTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS TCA 72 bp TGCAGCCTCCAAGTAGGGAATGGACAGTTTCAGTGTTaGGGCAGAGTGGCAAAGACAAGAGACCCACAGCAC +
Preference number: 6 (lower is better)
Translates to: CSLQVGNGQFQC*GRVAKTRDPQH
Trigger: GTGCTGTGGGTCTCTTGTCTTTGCCACTCTGCCTCAACACTGAAACTGTCCATTCCCTACTTGGAGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS GCA 72 bp CTTGGAAAGAAATCAGGGCTCCAACTAGAGCTGCCTTaGTGGAAGCTCGCACTGTCCTGTCCCGATGTATCA +
Preference number: 6 (lower is better)
Translates to: LGKKSGLQLELP*WKLALSCPDVS
Trigger: TGATACATCGGGACAGGACAGTGCGAGCTTCCAGCAAGGCAGCTCTAGTTGGAGCCCTGATTTCTTTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CAA 90 bp AGGTTTTGGGTGCAGCCTCCAAGTAGGGAATGGACAGTTTCAGTGTaGAGGCAGAGTGGCAAAGACAAGAGACCCACAGCACCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: RFWVQPPSREWTVSV*RQSGKDKRPTAPRK
Trigger: TTTCCTGGGTGCTGTGGGTCTCTTGTCTTTGCCACTCTGCCTCAACACTGAAACTGTCCATTCCCTACTTGGAGGCTGCACCCAAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS GCA 72 bp CTATTCCACAAACATAAAACTGAGGTACCAAGAGGCTaGAAAACCAGCAGAGTCCTGATGCTGGGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LFHKHKTEVPRG*KTSRVLMLGSG
Trigger: GCCACTGCCCAGCATCAGGACTCTGCTGGTTTTGCAGCCTCTTGGTACCTCAGTTTTATGTTTGTGGAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CAA 90 bp CTGTCTCTACCTTCGTGGAGAGGATTTCTGGGTTGGGAGAAGGTTTaGTATTTATTTCACTGTTGCCATCACACACCTGTCTGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LSLPSWRGFLGWEKV*YLFHCCHHTPVCWD
Trigger: GTCCCAGCAGACAGGTGTGTGATGGCAACAGTGAAATAAATACAAAACCTTCTCCCAACCCAGAAATCCTCTCCACGAAGGTAGAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS TCA 72 bp CTACCACACCTTTTGCCAGGATCCCAGAGAGTACTGTaGGCACTCCTATTCCACAAACATAAAACTGAGGTA +
Preference number: 6 (lower is better)
Translates to: LPHLLPGSQRVL*ALLFHKHKTEV
Trigger: TACCTCAGTTTTATGTTTGTGGAATAGGAGTGCTCACAGTACTCTCTGGGATCCTGGCAAAAGGTGTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CCA 72 bp TTTCTGTCTCTACCTTCGTGGAGAGGATTTCTGGGTTaGGAGAAGGTTTTGTATTTATTTCACTGTTGCCAT +
Preference number: 6 (lower is better)
Translates to: FLSLPSWRGFLG*EKVLYLFHCCH
Trigger: ATGGCAACAGTGAAATAAATACAAAACCTTCTCCCAACCCAGAAATCCTCTCCACGAAGGTAGAGACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CAA 72 bp TTTTCTGTCTCTACCTTCGTGGAGAGGATTTCTGGGTaGGGAGAAGGTTTTGTATTTATTTCACTGTTGCCA +
Preference number: 6 (lower is better)
Translates to: FSVSTFVERISG*GEGFVFISLLP
Trigger: TGGCAACAGTGAAATAAATACAAAACCTTCTCCCAACCCAGAAATCCTCTCCACGAAGGTAGAGACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS TCA 72 bp AAAGCCAGTAAGGTAATAGAGCATCACCTGTTAGGATaGACTATGTGTGACAAATGGTGCTGTCAAATTCGT +
Preference number: 6 (lower is better)
Translates to: KASKVIEHHLLG*TMCDKWCCQIR
Trigger: ACGAATTTGACAGCACCATTTGTCACACATAGTTCATCCTAACAGGTGATGCTCTATTACCTTACTGGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS GCA 72 bp TTGTATTTATTTCACTGTTGCCATCACACACCTGTCTaGTGGGACAAAATCTCAATCACCGATTTCATCAAC +
Preference number: 6 (lower is better)
Translates to: LYLFHCCHHTPV*WDKISITDFIN
Trigger: GTTGATGAAATCGGTGATTGAGATTTTGTCCCAGCAGACAGGTGTGTGATGGCAACAGTGAAATAAATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684351.1
CDS CCA 72 bp TATTTATTTCACTGTTGCCATCACACACCTGTCTGCTaGGACAAAATCTCAATCACCGATTTCATCAACATC +
Preference number: 6 (lower is better)
Translates to: YLFHCCHHTPVC*DKISITDFINI
Trigger: GATGTTGATGAAATCGGTGATTGAGATTTTGTCCCAGCAGACAGGTGTGTGATGGCAACAGTGAAATAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684351.1