RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF143 (Homo sapiens)

Ensembl gene IDs: ENSG00000166478

Ensembl transcript IDs: ENST00000299606.6, ENST00000396597.7, ENST00000396602.7, ENST00000396604.5, ENST00000412390.6, ENST00000414370.5, ENST00000417726.1, ENST00000438144.6, ENST00000447186.1, ENST00000496276.5, ENST00000526657.5, ENST00000527597.1, ENST00000530463.5, ENST00000531943.5, ENST00000532305.1, ENST00000532577.5, ENST00000533542.5, ENST00000534265.5

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTaGCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATTGTTC +
Preference number: 1 (lower is better)
Translates to: GKLLIFLGPGFMDFC*QKMKDSFCFIAPLF
Trigger: GAACAATGGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR GCA 90 bp AATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTaGTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATTG +
Preference number: 1 (lower is better)
Translates to: NGKLLIFLGPGFMDF*CQKMKDSFCFIAPL
Trigger: CAATGGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR CCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTTGGGCCCGGGCTTCATaGATTTCTGCTGCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: TADTLLTGEISEGFTPFIWARAS*ISAARR
Trigger: TCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCA...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
3UTR-3UTR CCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTGGGCCCGGGCTTCATaGATTTCTGCTGCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVWARAS*ISAARR
Trigger: TCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR CCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATGGGCCCGGGCTTCATaGATTTCTGCTGCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTWARAS*ISAARR
Trigger: TCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR TCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCACAATGAATCACTCTaGGAATCTATTCCAAGGGTT +
Preference number: 2 (lower is better)
Translates to: TADTLLTGEISEGFTPFIHNESL*ESIPRV
Trigger: AACCCTTGGAATAGATTCTCAGAGTGATTCATTGTG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
3UTR-3UTR TCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATCTGCTGCCAGAAGATaGAAGACTCCTTCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLSAARR*KTPSAL
Trigger: TAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR GCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACAATGAAAGACTCCTTCTaGTTTATTGCTCCATTGTTC +
Preference number: 2 (lower is better)
Translates to: RTKTADTLLTGEISEGFTMKDSF*FIAPLF
Trigger: GAACAATGGAGCAATAAAGCAGAAGGAGTCTTTCAT...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
3UTR-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTTCATGGATTTCTGCTaGCAGAAGATGAAAGACTCC +
Preference number: 2 (lower is better)
Translates to: LKALHPLLSIMAFGITIVFMDFC*QKMKDS
Trigger: GGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAA...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAGGCTTCATGGATTTCTaGTGCCAGAAGATGAAAGAC +
Preference number: 2 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLGFMDF*CQKMKD
Trigger: GTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCC...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATTCATGGATTTCTGCTaGCAGAAGATGAAAGACTCC +
Preference number: 2 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLFMDFC*QKMKDS
Trigger: GGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR TCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGCTTCCTTGTACACAATaGATCACTCTGAGAATCTAT +
Preference number: 2 (lower is better)
Translates to: LKALHPLLSIMAFGITIVLPCTQ*ITLRIY
Trigger: ATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAG...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR GCA 72 bp CTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTaGTGCCAGAAGATGAAAGACTCCTTCTGCTTTATT +
Preference number: 3 (lower is better)
Translates to: LLIFLGPGFMDF*CQKMKDSFCFI
Trigger: AATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR-3UTR CAA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGAAGACTTTACTAGTCTaGCATGTAGACTCTAGGAGT +
Preference number: 3 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVKTLLV*HVDSRS
Trigger: ACTCCTAGAGTCTACATGCAAGACTAGTAAAGTCTT...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR TCA 72 bp CTGTATTGCCCTAATTTCATACTTCCTTGTACACAATaGATCACTCTGAGAATCTATTCCAAGGGTTATATA +
Preference number: 3 (lower is better)
Translates to: LYCPNFILPCTQ*ITLRIYSKGYI
Trigger: TATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAATTAGGGCAATACAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
3UTR CCA 72 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTaGAATTACGATTGTGTGACATATAGAACCTTTGAT +
Preference number: 3 (lower is better)
Translates to: EGFTPFIIHNGF*NYDCVTYRTFD
Trigger: ATCAAAGGTTCTATATGTCACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTCATGGGCGGGGACTGTaGTGGGCGTGCCATCCTGCG +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFHGRGL*WACHPA
Trigger: CGCAGGATGGCACGCCCATCACAGTCCCCGCCCATG...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCATGGGCGGGGACTGTaGTGGGCGTGCCATCCTGCG +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLHGRGL*WACHPA
Trigger: CGCAGGATGGCACGCCCATCACAGTCCCCGCCCATG...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTCAGCCCGCCCCTGAGTaGCTCGCGCAAAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFQPAPE*LAQSAE
Trigger: TTCTGCACTTTGCGCGAGCCACTCAGGGGCGGGCTG...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCGAGTCATACCGATTCTaGGGCCCCAGCGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCESYRF*GPSGRR
Trigger: GCGCCTCCCGCTGGGGCCCCAGAATCGGTATGACTC...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR TCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAGACGTCAGCCAAGCCTaGCTTTACAGCCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERDVSQA*LYSPPL
Trigger: CAGGGGCGGGCTGTAAAGTCAGGCTTGGCTGACGTC...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR GCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTGGGCTGTCCGTTTGTaGATGGCCAGCGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFWAVRL*MASVEI
Trigger: GATCTCCACGCTGGCCATGCACAAACGGACAGCCCA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGCGAGGAGGCGGCTTTaGTTCTCCCGGTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDARRRL*FSRWAC
Trigger: GCAAGCCCACCGGGAGAACCAAAGCCGCCTCCTCGC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTCCGATCTCCTGTGTGTaGCCTCTCATGGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFPISCV*PLMDLE
Trigger: CTCAAGGTCCATGAGAGGTCACACACAGGAGATCGG...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCATGGGCGGGGACTGTaGTGGGCGTGCCATCCTGCG +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIHGRGL*WACHPA
Trigger: CGCAGGATGGCACGCCCATCACAGTCCCCGCCCATG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp GGGTACATGTTGAACATAGGCCGCAGAACCATCTTCCAACTGAATGACCTGGCCCACAGCGTAACATGTTaGGCCTCCATCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GYMLNIGRRTIFQLNDLAHSVTC*ASIPPP
Trigger: TGGAGGAGGGATGGAGGCGCAACATGTTACGCTGTG...GGCCAGGTCATTCAGTTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAATTCTCCCGGTGGGCTTaGCGGAGTGCGTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEFSRWA*RSAFCR
Trigger: TCTGCAGAACGCACTCCGGCAAGCCCACCGGGAGAA...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR CCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTGGCTCAGTGTCGTTGTaGGCTGTCCGTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFGSVSL*AVRLCM
Trigger: CATGCACAAACGGACAGCCCACAACGACACTGAGCC...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACACCATCTGCCACGGTaGCTGCCTCTGTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERHHLPR*LPLSST
Trigger: TGTGCTTGACAGAGGCAGTCACCGTGGCAGATGGTG...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTGTACCATCTTCCAGCTaGACCGCCTGTAATGCACTC +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFVPSSS*TACNAL
Trigger: GAGTGCATTACAGGCGGTTCAGCTGGAAGATGGTAC...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTCCTGCGTTACCATTGTaGTGGTGTTGCCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFPALPL*WCCQWP
Trigger: AGGCCATTGGCAACACCATCACAATGGTAACGCAGG...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGATTCCTGCTGAGGAGATaGCTGCATCATGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERFLLRR*LHHGRG
Trigger: TCCCCGCCCATGATGCAGTCATCTCCTCAGCAGGAA...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTAAGATGGTGTCAGACTaGGGGACTTGCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFKMVSD*GTCTAW
Trigger: CCATGCAGTGCAAGTCCCGCAGTCTGACACCATCTT...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTGCCTTCCCACAGCCTaGATGCTCACACTGATAAGG +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFCLPTA*MLTLIR
Trigger: CCTTATCAGTGTGAGCATGCAGGCTGTGGGAAGGCA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAATGGGCTGTCCGTTTGTaGATGGCCAGCGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEWAVRL*MASVEI
Trigger: GATCTCCACGCTGGCCATGCACAAACGGACAGCCCA...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTGGCTATGCTGCTGGTaGCCCATTTCTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFWLCCW*PISDEA
Trigger: TGCCTCATCAGAAATGGGGCACCAGCAGCATAGCCA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATCCTGCTCCTCCTCGATaGGCTCAGTGTCGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDPAPPR*AQCRCG
Trigger: CCCACAACGACACTGAGCCCATCGAGGAGGAGCAGG...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCGAGATGACTGCATCATaGGCGGGGACTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCEMTAS*AGTVMG
Trigger: GCCCATCACAGTCCCCGCCCATGATGCAGTCATCTC...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGAGATGACTGCATCATaGGCGGGGACTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEEMTAS*AGTVMG
Trigger: GCCCATCACAGTCCCCGCCCATGATGCAGTCATCTC...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTACTGTCCCATCAGCCTaGATTGCCAAGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFTVPSA*IAKMVS
Trigger: TGACACCATCTTGGCAATTCAGGCTGATGGGACAGT...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCGATCTCCTGTGTGTaGCCTCTCATGGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLPISCV*PLMDLE
Trigger: CTCAAGGTCCATGAGAGGTCACACACAGGAGATCGG...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCCGATCTCCTGTGTGTaGCCTCTCATGGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCPISCV*PLMDLE
Trigger: CTCAAGGTCCATGAGAGGTCACACACAGGAGATCGG...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTCTGTGGTTACTAAGTaGTGGCTATGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFSVVTK*WLCCWC
Trigger: GCACCAGCAGCATAGCCATCACTTAGTAACCACAGA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGATGTTGCACTGGCAAATaGCCTCCCACATCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERCCTGK*PPTSWL
Trigger: GAGCCAGGATGTGGGAGGGCATTTGCCAGTGCAACA...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCTGTTGCACTGGCAAATaGCCTCCCACATCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCCCTGK*PPTSWL
Trigger: GAGCCAGGATGTGGGAGGGCATTTGCCAGTGCAACA...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTGTCCGTTTGTGCATaGCCAGCGTGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERLSVCA*PAWRSA
Trigger: AGCAGATCTCCACGCTGGCCATGCACAAACGGACAG...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCATCTTCACCTTGACCTaGGGGCGGCTCAAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCIFTLT*GRLKEG
Trigger: GCCTTCTTTGAGCCGCCCCCAGGTCAAGGTGAAGAT...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTGGCTTCTTCCAGAGATaGCTGTTCTCCAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFGFFQR*LFSKLN
Trigger: GTTCAGCTTGGAGAACAGCCATCTCTGGAAGAAGCC...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTACTGTTCCAAAGCACTaGTGGTGTCAGGGTCAATTG +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFTVPKH*WCQGQL
Trigger: CAATTGACCCTGACACCATCAGTGCTTTGGAACAGT...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCCTGCGTTACCATTGTaGTGGTGTTGCCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCPALPL*WCCQWP
Trigger: AGGCCATTGGCAACACCATCACAATGGTAACGCAGG...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCAGAGTGCGTTCCTGCTaGGGAGATGACTGCATCATG +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCRVRSC*GDDCIM
Trigger: CATGATGCAGTCATCTCCTCAGCAGGAACGCACTCT...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGAGAGTGCGTTCCTGCTaGGGAGATGACTGCATCATG +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLRVRSC*GDDCIM
Trigger: CATGATGCAGTCATCTCCTCAGCAGGAACGCACTCT...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGGCTGTTCTCCAAGCTaGACTGCAATCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDGCSPS*TAIWVP
Trigger: TGGCACCCAGATTGCAGTTCAGCTTGGAGAACAGCC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATCACAGCGTAACATGTTaGGCCTCCATCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDHSVTC*ASIPPP
Trigger: TGGAGGAGGGATGGAGGCGCAACATGTTACGCTGTG...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAAAGATGGTGTCAGACTaGGGGACTTGCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEKMVSD*GTCTAW
Trigger: CCATGCAGTGCAAGTCCCGCAGTCTGACACCATCTT...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGTCAAAGAAGGCTTCCTaGTCCTCCTCGATGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLSKKAS*SSSMGS
Trigger: TGAGCCCATCGAGGAGGAGCAGGAAGCCTTCTTTGA...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGATGGGCGTGCCATCCTaGGTTACCATTGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLMGVPS*VTIVMV
Trigger: CACCATCACAATGGTAACGCAGGATGGCACGCCCAT...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCCTGCTCCTCCTCGATaGGCTCAGTGTCGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIPAPPR*AQCRCG
Trigger: CCCACAACGACACTGAGCCCATCGAGGAGGAGCAGG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp TGTACTTTTAGGTATGGGTACATGTTGAACATAGGCCGCAGAACCATCTTCCAACACCATCTGCCACGGTaGCTGCCTCTGTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: CTFRYGYMLNIGRRTIFQHHLPR*LPLSST
Trigger: TGTGCTTGACAGAGGCAGTCACCGTGGCAGATGGTG...TTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR TCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGACTGTCCCATCAGCCTaGATTGCCAAGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLTVPSA*IAKMVS
Trigger: TGACACCATCTTGGCAATTCAGGCTGATGGGACAGT...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCGGCTGTTCTCCAAGCTaGACTGCAATCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSGCSPS*TAIWVP
Trigger: TGGCACCCAGATTGCAGTTCAGCTTGGAGAACAGCC...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTCTTTGGAGGTGTGGTaGATAAATGCTGTGGTACCA +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFSLEVW*INAVVP
Trigger: TGGTACCACAGCATTTATTCACCACACCTCCAAAGA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGGGAGGCTGGTCCTTGTaGTTACCCGGGAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVGGWSL*LPGREP
Trigger: CGGCTCCCTCCCGGGTAATCACAAGGACCAGCCTCC...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR GCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATCTGCAAGTGTTACTaGTTGCAAGCTTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFICKCY*LQAYAF
Trigger: GAAGGCGTAAGCTTGCAAGCAGTAACACTTGCAGAT...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAACTGCGGGACTTGCACTaGATGGTGGATATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPELRDLH*MVDISC
Trigger: ACAGCTTATATCCACCATGCAGTGCAAGTCCCGCAG...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACCCATCAGCCTGAATTaGCAAGATGGTGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERPISLN*QDGVRL
Trigger: CAGTCTGACACCATCTTGGCAATTCAGGCTGATGGG...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCCATCAGCCTGAATTaGCAAGATGGTGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLPISLN*QDGVRL
Trigger: CAGTCTGACACCATCTTGGCAATTCAGGCTGATGGG...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAACCTGAATTGCCAAGATaGTGTCAGACTGCGGGACTT +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEPELPR*CQTAGL
Trigger: AAGTCCCGCAGTCTGACACCATCTTGGCAATTCAGG...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCCTGAATTGCCAAGATaGTGTCAGACTGCGGGACTT +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCPELPR*CQTAGL
Trigger: AAGTCCCGCAGTCTGACACCATCTTGGCAATTCAGG...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCTGCTCCTCCTCGATaGGCTCAGTGTCGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RTKTADTLLTGEISEGFTPAPPR*AQCRCG
Trigger: CCCACAACGACACTGAGCCCATCGAGGAGGAGCAGG...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATCTTCACCTTGACCTaGGGGCGGCTCAAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSIFTLT*GRLKEG
Trigger: GCCTTCTTTGAGCCGCCCCCAGGTCAAGGTGAAGAT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGTGGGCCCGGGCTTCATaGATTTCTGCTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLWARAS*ISAARR
Trigger: TCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCA...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAGATATGTTGACATGCTaGGTCCCATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERDMLTC*VPSWDM
Trigger: CATATCCCAGGATGGGACTCAGCATGTCAACATATC...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGGATATGTTGACATGCTaGGTCCCATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLDMLTC*VPSWDM
Trigger: CATATCCCAGGATGGGACTCAGCATGTCAACATATC...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCCCTGCGTTACCATTGTaGTGGTGTTGCCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSPALPL*WCCQWP
Trigger: AGGCCATTGGCAACACCATCACAATGGTAACGCAGG...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACATTCCTGCTGAGGAGATaGCTGCATCATGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: RTKTADTLLTGEISEGFTFLLRR*LHHGRG
Trigger: TCCCCGCCCATGATGCAGTCATCTCCTCAGCAGGAA...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATCAAAGCTCCTGTGTCTaGCTGGTTGACATAACCGCT +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDQSSCV*LVDITA
Trigger: AGCGGTTATGTCAACCAGTCAGACACAGGAGCTTTG...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR TCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTTTACAGCCCGCCCCTaGGTGGCTCGCGCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVFTARP*VARAKC
Trigger: GCACTTTGCGCGAGCCACTCAGGGGCGGGCTGTAAA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR GCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCACAGCGTAACATGTTaGGCCTCCATCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIHSVTC*ASIPPP
Trigger: TGGAGGAGGGATGGAGGCGCAACATGTTACGCTGTG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTAGCAGTAGAACCATCTaGAAGTGTTACTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFSSRTI*KCYCLQ
Trigger: TTGCAAGCAGTAACACTTGCAGATGGTTCTACTGCT...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCATAACCTGTTGCAAATaGCTTCCCACAGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCITCCK*LPTACM
Trigger: CATGCAGGCTGTGGGAAGGCATTTGCAACAGGTTAT...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGGCCAGCGTGGAGATCTaGTTGTATGTCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLASVEI*LYVFPQ
Trigger: CTGTGGGAAGACATACAAGCAGATCTCCACGCTGGC...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGTTCTCCAAGCTGAACTaGAATCTGGGTGCCATTGGA +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLFSKLN*NLGAIG
Trigger: TCCAATGGCACCCAGATTGCAGTTCAGCTTGGAGAA...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATTGTGCATGGCCAGCGTaGAGATCTGCTTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDCAWPA*RSACMS
Trigger: AGACATACAAGCAGATCTCCACGCTGGCCATGCACA...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACAGAGATGACTGCATCATaGGCGGGGACTGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RTKTADTLLTGEISEGFTEMTAS*AGTVMG
Trigger: GCCCATCACAGTCCCCGCCCATGATGCAGTCATCTC...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTGAGGTCTGGTTTCTGTaGTTACTAAGTGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFEVWFL*LLSDGY
Trigger: ATAGCCATCACTTAGTAACCACAGAAACCAGACCTC...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGGCTTCTTCCAGAGATaGCTGTTCTCCAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDGFFQR*LFSKLN
Trigger: GTTCAGCTTGGAGAACAGCCATCTCTGGAAGAAGCC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTTCAGCTTGAAGAGCTaGTTTTTAACAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFFSLKS*FLTGMG
Trigger: TCCCATCCCTGTTAAAAACCAGCTCTTCAAGCTGAA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAACCATCTTCCAACTaGATGACCTGGCCATCTATG +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDEPSSN*MTWPSM
Trigger: CATAGATGGCCAGGTCATTCAGTTGGAAGATGGTTC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGACTGTCCCATCAGCCTaGATTGCCAAGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLTVPSA*IAKMVS
Trigger: TGACACCATCTTGGCAATTCAGGCTGATGGGACAGT...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTTCTCTCCACTCTGTTaGGATTTAGCAGTTACTCTT +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFFSPLC*DLAVTL
Trigger: AAGAGTAACTGCTAAATCTCAACAGAGTGGAGAGAA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAACCTCTCATGGACCTTaGGATGATGAGCTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPETSHGP*DDELLY
Trigger: ATACAACAGCTCATCATCTCAAGGTCCATGAGAGGT...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGATATGTTGACATGCTaGGTCCCATCCTGGGATATG +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDDMLTC*VPSWDM
Trigger: CATATCCCAGGATGGGACTCAGCATGTCAACATATC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCTCTGTGGTTACTAAGTaGTGGCTATGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSSVVTK*WLCCWC
Trigger: GCACCAGCAGCATAGCCATCACTTAGTAACCACAGA...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGCGGACCCCGCCTCACTaGCTAGCGAGTCATACCGAT +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVRTPPH*LASHTD
Trigger: ATCGGTATGACTCGCTAGTCAGTGAGGCGGGGTCCG...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR GCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCGTCTTGAGCTACAATTaGAACCTGTTCCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCVLSYN*NLFPFC
Trigger: ACAGAAGGGGAACAGGTTGCAATTGTAGCTCAAGAC...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAGGCAGTATGGAATGCTaGCAAGTCTTGAGCTACAAT +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERGSMEC*QVLSYN
Trigger: ATTGTAGCTCAAGACTTGGCAGCATTCCATACTGCC...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTTGGCTATGCTGCTGGTaGCCCATTTCTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIWLCCW*PISDEA
Trigger: TGCCTCATCAGAAATGGGGCACCAGCAGCATAGCCA...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGAACTGCAATCTGGGTaGCATTGGATGTTGCTACTA +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEELQSG*HWMLLL
Trigger: TAGTAGCAACATCCAATGGCACCCAGATTGCAGTTC...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACCATCTTCCAACTGAATGACCTGGCCATCTATGAGTTTTGCATACAACTTAAGTTCGTCCGACCACCATaGACCAGGACAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: TIFQLNDLAIYEFCIQLKFVRPP*TRTGNS
Trigger: GCTGTTTCCTGTCCTGGTGCATGGTGGTCGGACGAA...CTTAAGTTGTATGCAAAACTCATAGATGGCCAGGTCATTCAGTTGGAAGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGGTGGGCTTGCCGGAGTaGGTTCTGCAGACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVVGLPE*VLQTRR
Trigger: CCTTCTGGTCTGCAGAACGCACTCCGGCAAGCCCAC...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR CCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTTTCACTTCCATCAATaGACACCTTTGCTGCATACT +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFFHFHQ*TPLLHT
Trigger: AGTATGCAGCAAAGGTGTCCATTGATGGAAGTGAAA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGTGTGCATGGCCAGCGTaGAGATCTGCTTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLCAWPA*RSACMS
Trigger: AGACATACAAGCAGATCTCCACGCTGGCCATGCACA...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACTGTCCGTTTGTGCATaGCCAGCGTGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RTKTADTLLTGEISEGFTLSVCA*PAWRSA
Trigger: AGCAGATCTCCACGCTGGCCATGCACAAACGGACAG...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACAGGCTCAGTGTCGTTGTaGGCTGTCCGTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: RTKTADTLLTGEISEGFTGSVSL*AVRLCM
Trigger: CATGCACAAACGGACAGCCCACAACGACACTGAGCC...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACAATCTGGGTGCCATTaGATGTTGCTACTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERQSGCH*MLLLRS
Trigger: TGACCTTAGTAGCAACATCCAATGGCACCCAGATTG...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAATCTGGGTGCCATTaGATGTTGCTACTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCQSGCH*MLLLRS
Trigger: TGACCTTAGTAGCAACATCCAATGGCACCCAGATTG...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCGGCTTCTTCCAGAGATaGCTGTTCTCCAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSGFFQR*LFSKLN
Trigger: GTTCAGCTTGGAGAACAGCCATCTCTGGAAGAAGCC...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCGGCGTTTCTCCTTGTTaGATTCTAGACGCTATTCTG +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCGVSPC*ILDAIL
Trigger: CAGAATAGCGTCTAGAATCCAACAAGGAGAAACGCC...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGCTTTGGTTCTCCCGGTaGGCTTGCCGGAGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVLWFSR*ACRSAF
Trigger: GAACGCACTCCGGCAAGCCCACCGGGAGAACCAAAG...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR TCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGCACCATCTGCCACGGTaGCTGCCTCTGTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVHHLPR*LPLSST
Trigger: TGTGCTTGACAGAGGCAGTCACCGTGGCAGATGGTG...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCACTGTTCCAAAGCACTaGTGGTGTCAGGGTCAATTG +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSTVPKH*WCQGQL
Trigger: CAATTGACCCTGACACCATCAGTGCTTTGGAACAGT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATACCTCTCATGGACCTTaGGATGATGAGCTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDTSHGP*DDELLY
Trigger: ATACAACAGCTCATCATCTCAAGGTCCATGAGAGGT...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTGTATGAGTTCTaGTGTGTTTCTGTAGATCTC +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERLLYEF*CVSVDL
Trigger: GAGATCTACAGAAACACATCAGAACTCATACAGGAG...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTCTTCCTTGTACACAATaGATCACTCTGAGAATCTAT +
Preference number: 4 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFLPCTQ*ITLRIY
Trigger: ATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAG...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CCCTGTACTTTTAGGTATGGGTACATGTTGAACATAGGCCGCAGAACCATCTTCGCAAGTGTTACTGCTTaGAAGCTTACGCCTTCCATA +
Preference number: 4 (lower is better)
Translates to: PCTFRYGYMLNIGRRTIFASVTA*KLTPSI
Trigger: TATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGC...GAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp CTGTGGTACCATCTTCTAACTGTACTGCTTGACCATCCTCTAGACGCAAACTGTATCTGCAAGTGTTACTaGTTGCAAGCTTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: LWYHLLTVLLDHPLDANCICKCY*LQAYAF
Trigger: GAAGGCGTAAGCTTGCAAGCAGTAACACTTGCAGAT...ACAGTTTGCGTCTAGAGGATGGTCAAGCAGTACAGTTAGAAGATGGTACCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAAGCAGTAGAACCATCTaGAAGTGTTACTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERSSRTI*KCYCLQ
Trigger: TTGCAAGCAGTAACACTTGCAGATGGTTCTACTGCT...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCTGCGGGACTTGCACTaGATGGTGGATATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFILRDLH*MVDISC
Trigger: ACAGCTTATATCCACCATGCAGTGCAAGTCCCGCAG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGGTAGCATCCCCAGTGTaGAGACCTGCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVVASPV*RPATVP
Trigger: TGGGACAGTGGCAGGTCTGCACACTGGGGATGCTAC...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAAATGGACACCTTTGCTaGATACTGTTCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPENGHLC*ILFQST
Trigger: AGTGCTTTGGAACAGTATGCAGCAAAGGTGTCCATT...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATCACATCCTGGCTCTGTaGAGTAATAAGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDHILAL*SNKVFL
Trigger: GAGAAAGACCTTATTACTGCACAGAGCCAGGATGTG...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTGGGCTGTCCGTTTGTaGATGGCCAGCGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVWAVRL*MASVEI
Trigger: GATCTCCACGCTGGCCATGCACAAACGGACAGCCCA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGTCTTGAGCTACAATTaGAACCTGTTCCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDVLSYN*NLFPFC
Trigger: ACAGAAGGGGAACAGGTTGCAATTGTAGCTCAAGAC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGGCTTCATGGATTTCTaGTGCCAGAAGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDGFMDF*CQKMKD
Trigger: GTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCTATAATTTGTTGCACTaGCAAATGCCCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCYNLLH*QMPSHI
Trigger: GATGTGGGAGGGCATTTGCCAGTGCAACAAATTATA...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCGAGGTCTGGTTTCTGTaGTTACTAAGTGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCEVWFL*LLSDGY
Trigger: ATAGCCATCACTTAGTAACCACAGAAACCAGACCTC...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCTAAGGTCAGAGGTCTaGTTTCTGTGGTTACTAAGT +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLLRSEV*FLWLLS
Trigger: ACTTAGTAACCACAGAAACCAGACCTCTGACCTTAG...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGGCGTTTCTCCTTGTTaGATTCTAGACGCTATTCTG +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDGVSPC*ILDAIL
Trigger: CAGAATAGCGTCTAGAATCCAACAAGGAGAAACGCC...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAACACCATCTGCCACGGTaGCTGCCTCTGTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQHHLPR*LPLSST
Trigger: TGTGCTTGACAGAGGCAGTCACCGTGGCAGATGGTG...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCTCCTGTATGAGTTCTaGCGTGACTTTTTAATCCAT +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLLLYEF*RDFLIH
Trigger: ATGGATTAAAAAGTCACGTCAGAACTCATACAGGAG...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAACTCCTGTATGAGTTCTaGCGTGACTTTTTAATCCAT +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPELLYEF*RDFLIH
Trigger: ATGGATTAAAAAGTCACGTCAGAACTCATACAGGAG...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATTCCTGCTGAGGAGATaGCTGCATCATGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLFLLRR*LHHGRG
Trigger: TCCCCGCCCATGATGCAGTCATCTCCTCAGCAGGAA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGAATGCTGCCAAGTCTTaGGCTACAATTGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLNAAKS*ATIATC
Trigger: ACAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATT...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCACAATGAATCACTCTaGGAATCTATTCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCHNESL*ESIPRV
Trigger: AACCCTTGGAATAGATTCTCAGAGTGATTCATTGTG...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCAACTGGGGAAATATCTaGAGGCTTTACACCCTTTAT +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCNWGNI*RLYTLY
Trigger: ATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTT...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCTCTAACTGTACTGCTTaGCCATCCTCTAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSSNCTA*PSSRRK
Trigger: TTTGCGTCTAGAGGATGGTCAAGCAGTACAGTTAGA...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TGCACTCTGGTCATAACTATCTTTGGAGGTGTGGTGAATAAATGCTGTGGTACCTCTAACTGTACTGCTTaGCCATCCTCTAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: CTLVITIFGGVVNKCCGTSNCTA*PSSRRK
Trigger: TTTGCGTCTAGAGGATGGTCAAGCAGTACAGTTAGA...GGTACCACAGCATTTATTCACCACACCTCCAAAGATAGTTATGACCAGAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGCACAGCGTAACATGTTaGGCCTCCATCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVHSVTC*ASIPPP
Trigger: TGGAGGAGGGATGGAGGCGCAACATGTTACGCTGTG...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGATCTGCCACGGTGACTaGCTCTGTCAAGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVICHGD*LCQAQR
Trigger: ACGCTGTGCTTGACAGAGGCAGTCACCGTGGCAGAT...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATAGCAGTAGAACCATCTaGAAGTGTTACTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDSSRTI*KCYCLQ
Trigger: TTGCAAGCAGTAACACTTGCAGATGGTTCTACTGCT...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAGTAGCATCCCCAGTGTaGAGACCTGCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQVASPV*RPATVP
Trigger: TGGGACAGTGGCAGGTCTGCACACTGGGGATGCTAC...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAGTAGCATCCCCAGTGTaGAGACCTGCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTVASPV*RPATVP
Trigger: TGGGACAGTGGCAGGTCTGCACACTGGGGATGCTAC...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATATCAATGGACACCTTTaGTGCATACTGTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDINGHL*CILFQS
Trigger: GCTTTGGAACAGTATGCAGCAAAGGTGTCCATTGAT...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGAATCATTCCAGTACCTaGTACACTTTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLNHSST*YTFTSI
Trigger: GATGGAAGTGAAAGTGTAGCAGGTACTGGAATGATT...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAAATCATTCCAGTACCTaGTACACTTTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPENHSST*YTFTSI
Trigger: GATGGAAGTGAAAGTGTAGCAGGTACTGGAATGATT...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCCACATCCTGGCTCTGTaGAGTAATAAGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSHILAL*SNKVFL
Trigger: GAGAAAGACCTTATTACTGCACAGAGCCAGGATGTG...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTGTTGCACTGGCAAATaGCCTCCCACATCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVCCTGK*PPTSWL
Trigger: GAGCCAGGATGTGGGAGGGCATTTGCCAGTGCAACA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGGAACTGCAATCTGGGTaGCATTGGATGTTGCTACTA +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLELQSG*HWMLLL
Trigger: TAGTAGCAACATCCAATGGCACCCAGATTGCAGTTC...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTaGTCCATTGTTCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERLLLLY*SIVLRI
Trigger: AATCCTCAGAACAATGGAGCAATAAAGCAGAAGGAG...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCTCCTTCTGCTTTATTaGTCCATTGTTCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLLLLLY*SIVLRI
Trigger: AATCCTCAGAACAATGGAGCAATAAAGCAGAAGGAG...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATTTCATGGATTTCTGCTaGCAGAAGATGAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDFMDFC*QKMKDS
Trigger: GGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAA...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGCTGTCCGTTTGTGCATaGCCAGCGTGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVLSVCA*PAWRSA
Trigger: AGCAGATCTCCACGCTGGCCATGCACAAACGGACAG...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGGGCTCAGTGTCGTTGTaGGCTGTCCGTTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVGSVSL*AVRLCM
Trigger: CATGCACAAACGGACAGCCCACAACGACACTGAGCC...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGATCTTCACCTTGACCTaGGGGCGGCTCAAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVIFTLT*GRLKEG
Trigger: GCCTTCTTTGAGCCGCCCCCAGGTCAAGGTGAAGAT...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCCGGGCACCAGCCTGTaGTTAAACTTTGATGATTCA +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIPGTSL*LNFDDS
Trigger: TGAATCATCAAAGTTTAACCACAGGCTGGTGCCCGG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396602.7
3UTR CAA 72 bp CAAACTGTCCCCTGTACTTTTAGGTATGGGTACATGTaGAACATAGGCCGCAGAACCATCTTCCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: QTVPCTFRYGYM*NIGRRTIFQLN
Trigger: ATTCAGTTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTACAGGGGACAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR TCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGGTACCATCTTCCAGCTaGACCGCCTGTAATGCACTC +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVVPSSS*TACNAL
Trigger: GAGTGCATTACAGGCGGTTCAGCTGGAAGATGGTAC...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATGAGTGTAACTTGTTaGCTCAGTCCAGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSMSVTC*LSPDWV
Trigger: AACCCAATCTGGACTGAGTCAACAAGTTACACTCAT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAGGCTGTTCTCCAAGCTaGACTGCAATCTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLGCSPS*TAIWVP
Trigger: TGGCACCCAGATTGCAGTTCAGCTTGGAGAACAGCC...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TTCCAACTGAATGACCTGGCCATCTATGAGTTTTGCATACAACTTAAGCTCGTGTCTTTGGAGGTGTGGTaGATAAATGCTGTGGTACCA +
Preference number: 4 (lower is better)
Translates to: FQLNDLAIYEFCIQLKLVSLEVW*INAVVP
Trigger: TGGTACCACAGCATTTATTCACCACACCTCCAAAGA...CACGAGCTTAAGTTGTATGCAAAACTCATAGATGGCCAGGTCATTCAGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTGCAAGTGTTACTGCTTaGAAGCTTACGCCTTCCATA +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIASVTA*KLTPSI
Trigger: TATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGC...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGAAGATGGTGTCAGACTaGGGGACTTGCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVKMVSD*GTCTAW
Trigger: CCATGCAGTGCAAGTCCCGCAGTCTGACACCATCTT...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGAATGGACACCTTTGCTaGATACTGTTCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLNGHLC*ILFQST
Trigger: AGTGCTTTGGAACAGTATGCAGCAAAGGTGTCCATT...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATCAATGGACACCTTTaGTGCATACTGTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSINGHL*CILFQS
Trigger: GCTTTGGAACAGTATGCAGCAAAGGTGTCCATTGAT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATAATCATTCCAGTACCTaGTACACTTTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDNHSST*YTFTSI
Trigger: GATGGAAGTGAAAGTGTAGCAGGTACTGGAATGATT...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGCCTTCCCACAGCCTaGATGCTCACACTGATAAGG +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVCLPTA*MLTLIR
Trigger: CCTTATCAGTGTGAGCATGCAGGCTGTGGGAAGGCA...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACAATAACCTGTTGCAAATaGCTTCCCACAGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: RTKTADTLLTGEISEGFTITCCK*LPTACM
Trigger: CATGCAGGCTGTGGGAAGGCATTTGCAACAGGTTAT...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCACATCCTGGCTCTGTaGAGTAATAAGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIHILAL*SNKVFL
Trigger: GAGAAAGACCTTATTACTGCACAGAGCCAGGATGTG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGGCCAGCGTGGAGATCTaGTTGTATGTCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVASVEI*LYVFPQ
Trigger: CTGTGGGAAGACATACAAGCAGATCTCCACGCTGGC...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTCAAAGAAGGCTTCCTaGTCCTCCTCGATGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVSKKAS*SSSMGS
Trigger: TGAGCCCATCGAGGAGGAGCAGGAAGCCTTCTTTGA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGATGGGCGTGCCATCCTaGGTTACCATTGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVMGVPS*VTIVMV
Trigger: CACCATCACAATGGTAACGCAGGATGGCACGCCCAT...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCATGAAAGACTCCTTCTaGTTTATTGCTCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCMKDSF*FIAPLF
Trigger: GAACAATGGAGCAATAAAGCAGAAGGAGTCTTTCAT...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAATTCGTCCGACCACCATaGACCAGGACAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQFVRPP*TRTGNS
Trigger: GCTGTTTCCTGTCCTGGTGCATGGTGGTCGGACGAA...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396602.7
CDS-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATGCCGGAGTGCGTTCTaGAGACCAGAAGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLCRSAF*RPEGLC
Trigger: ACAAAGCCCTTCTGGTCTGCAGAACGCACTCCGGCA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR CCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTGCCCTCCCACATCCTaGCTCTGTGCAGTAATAAGG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVCPPTS*LCAVIR
Trigger: CCTTATTACTGCACAGAGCCAGGATGTGGGAGGGCA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCTATAATTTGTTGCACTaGCAAATGCCCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSYNLLH*QMPSHI
Trigger: GATGTGGGAGGGCATTTGCCAGTGCAACAAATTATA...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGTACAGTTGTAAGGTTTaGAATGAGTGTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLYSCKV*NECGQH
Trigger: ATGTTGTCCACACTCATTCCAAACCTTACAACTGTA...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTGGCGTTTCTCCTTGTTaGATTCTAGACGCTATTCTG +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIGVSPC*ILDAIL
Trigger: CAGAATAGCGTCTAGAATCCAACAAGGAGAAACGCC...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGTTAATCATCCAACCCTaGCGTTTCTCCTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLLIIQP*RFSLLD
Trigger: ATCCAACAAGGAGAAACGCCAGGGTTGGATGATTAA...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATGGGCCCGGGCTTCATaGATTTCTGCTGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLWARAS*ISAARR
Trigger: TCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAGTACCATCTTCCAGCTaGACCGCCTGTAATGCACTC +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTVPSSS*TACNAL
Trigger: GAGTGCATTACAGGCGGTTCAGCTGGAAGATGGTAC...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGCTGTGTCTGACTGGTTaGCATAACCGCTTATCCCAG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVLCLTG*HNRLSQ
Trigger: CTGGGATAAGCGGTTATGTCAACCAGTCAGACACAG...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR TCA 90 bp TTTAGGTATGGGTACATGTTGAACATAGGCCGCAGAACCATCTTCCAACTGAATAGCTCGTGTTCATCTTaGTTCTTCCCTCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: FRYGYMLNIGRRTIFQLNSSCSS*FFPQCS
Trigger: AGAACATTGAGGGAAGAATCAAGATGAACACGAGCT...ATTCAGTTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp TTCCAACTGAATGACCTGGCCATCTATGAGTTTTGCATACAACTTAAGCTCGTGAGCAGTAGAACCATCTaGAAGTGTTACTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: FQLNDLAIYEFCIQLKLVSSRTI*KCYCLQ
Trigger: TTGCAAGCAGTAACACTTGCAGATGGTTCTACTGCT...CACGAGCTTAAGTTGTATGCAAAACTCATAGATGGCCAGGTCATTCAGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGATATTCACATCGAAATaGCTTCTCTCCACTCTGTTG +
Preference number: 4 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLIFTSK*LLSTLL
Trigger: CAACAGAGTGGAGAGAAGGCATTTCGATGTGAATAT...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATGCCTTCCCACAGCCTaGATGCTCACACTGATAAGG +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLCLPTA*MLTLIR
Trigger: CCTTATCAGTGTGAGCATGCAGGCTGTGGGAAGGCA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAGCCAGCGTGGAGATCTaGTTGTATGTCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTASVEI*LYVFPQ
Trigger: CTGTGGGAAGACATACAAGCAGATCTCCACGCTGGC...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAATGGGCGTGCCATCCTaGGTTACCATTGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLMGVPS*VTIVMV
Trigger: CACCATCACAATGGTAACGCAGGATGGCACGCCCAT...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATGGCTATGCTGCTGGTaGCCCATTTCTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLWLCCW*PISDEA
Trigger: TGCCTCATCAGAAATGGGGCACCAGCAGCATAGCCA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATATGAAAGACTCCTTCTaGTTTATTGCTCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDMKDSF*FIAPLF
Trigger: GAACAATGGAGCAATAAAGCAGAAGGAGTCTTTCAT...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTTTCATGGATTTCTGCTaGCAGAAGATGAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFIFMDFC*QKMKDS
Trigger: GGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAA...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACAGGCTTCATGGATTTCTaGTGCCAGAAGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RTKTADTLLTGEISEGFTGFMDF*CQKMKD
Trigger: GTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCC...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp TGCACTCTGGTCATAACTATCTTTGGAGGTGTGGTGAATAAATGCTGTGGTACCGCCATCTATGAGTTTTaGATACAACTTAAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: CTLVITIFGGVVNKCCGTAIYEF*IQLKLV
Trigger: CACGAGCTTAAGTTGTATGCAAAACTCATAGATGGC...GGTACCACAGCATTTATTCACCACACCTCCAAAGATAGTTATGACCAGAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR CCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGCCTGAATTGCCAAGATaGTGTCAGACTGCGGGACTT +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVPELPR*CQTAGL
Trigger: AAGTCCCGCAGTCTGACACCATCTTGGCAATTCAGG...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAATGCCCTCCCACATCCTaGCTCTGTGCAGTAATAAGG +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQCPPTS*LCAVIR
Trigger: CCTTATTACTGCACAGAGCCAGGATGTGGGAGGGCA...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATGCCCTCCCACATCCTaGCTCTGTGCAGTAATAAGG +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLCPPTS*LCAVIR
Trigger: CCTTATTACTGCACAGAGCCAGGATGTGGGAGGGCA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTCTAAGGTCAGAGGTCTaGTTTCTGTGGTTACTAAGT +
Preference number: 4 (lower is better)
Translates to: TADTLLTGEISEGFTPFILRSEV*FLWLLS
Trigger: ACTTAGTAACCACAGAAACCAGACCTCTGACCTTAG...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCATCCATAATGGCTTTTaGAATTACGATTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCIHNGF*NYDCVT
Trigger: TGTCACACAATCGTAATTCCAAAAGCCATTATGGAT...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGACTGTTCCAAAGCACTaGTGGTGTCAGGGTCAATTG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVTVPKH*WCQGQL
Trigger: CAATTGACCCTGACACCATCAGTGCTTTGGAACAGT...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TGTACTTTTAGGTATGGGTACATGTTGAACATAGGCCGCAGAACCATCTTCCAACTTCCCTCAATGTTCTaGGGCAATTCAATAACACAT +
Preference number: 4 (lower is better)
Translates to: CTFRYGYMLNIGRRTIFQLPSMF*GNSITH
Trigger: ATGTGTTATTGAATTGCCTCAGAACATTGAGGGAAG...TTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTACTGCGGGACTTGCACTaGATGGTGGATATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLLRDLH*MVDISC
Trigger: ACAGCTTATATCCACCATGCAGTGCAAGTCCCGCAG...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACACCCATCAGCCTGAATTaGCAAGATGGTGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTPISLN*QDGVRL
Trigger: CAGTCTGACACCATCTTGGCAATTCAGGCTGATGGG...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTTCTCCAAGCTGAACTaGAATCTGGGTGCCATTGGA +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVFSKLN*NLGAIG
Trigger: TCCAATGGCACCCAGATTGCAGTTCAGCTTGGAGAA...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATGAAAGACTCCTTCTaGTTTATTGCTCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSMKDSF*FIAPLF
Trigger: GAACAATGGAGCAATAAAGCAGAAGGAGTCTTTCAT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATGTGCATGGCCAGCGTaGAGATCTGCTTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTCAWPA*RSACMS
Trigger: AGACATACAAGCAGATCTCCACGCTGGCCATGCACA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCGTAACATACGTAATCTaGGACCCTTTAAGAACATCT +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSVTYVI*DPLRTS
Trigger: AGATGTTCTTAAAGGGTCCCAGATTACGTATGTTAC...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGAATGCTGCCAAGTCTTaGGCTACAATTGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVNAAKS*ATIATC
Trigger: ACAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATT...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGGCAAGTGTTACTGCTTaGAAGCTTACGCCTTCCATA +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVASVTA*KLTPSI
Trigger: TATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGC...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGGCAAGTGTTACTGCTTaGAAGCTTACGCCTTCCATA +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVASVTA*KLTPSI
Trigger: TATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGC...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGATCTGCAAGTGTTACTaGTTGCAAGCTTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVICKCY*LQAYAF
Trigger: GAAGGCGTAAGCTTGCAAGCAGTAACACTTGCAGAT...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAATAACCTGTTGCAAATaGCTTCCCACAGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTITCCK*LPTACM
Trigger: CATGCAGGCTGTGGGAAGGCATTTGCAACAGGTTAT...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATTCTCCAAGCTGAACTaGAATCTGGGTGCCATTGGA +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLFSKLN*NLGAIG
Trigger: TCCAATGGCACCCAGATTGCAGTTCAGCTTGGAGAA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGGGCTTCATGGATTTCTaGTGCCAGAAGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVGFMDF*CQKMKD
Trigger: GTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCC...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATCCATAATGGCTTTTaGAATTACGATTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSIHNGF*NYDCVT
Trigger: TGTCACACAATCGTAATTCCAAAAGCCATTATGGAT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGCTCCTGTATGAGTTCTaGTGTGTTTCTGTAGATCTC +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVLLYEF*CVSVDL
Trigger: GAGATCTACAGAAACACATCAGAACTCATACAGGAG...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAAATGCTGCCAAGTCTTaGGCTACAATTGCAACCTGT +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLNAAKS*ATIATC
Trigger: ACAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATT...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATCTGCTGCCAGAAGATaGAAGACTCCTTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTSAARR*KTPSAL
Trigger: TAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAATCTGCTGCCAGAAGATaGAAGACTCCTTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQSAARR*KTPSAL
Trigger: TAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGA...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAATCTAACTGTACTGCTTaGCCATCCTCTAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQSNCTA*PSSRRK
Trigger: TTTGCGTCTAGAGGATGGTCAAGCAGTACAGTTAGA...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396602.7
CDS-3UTR TCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATCTTTGGAGGTGTGGTaGATAAATGCTGTGGTACCA +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTSLEVW*INAVVP
Trigger: TGGTACCACAGCATTTATTCACCACACCTCCAAAGA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAATCTGCAAGTGTTACTaGTTGCAAGCTTACGCCTTC +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLICKCY*LQAYAF
Trigger: GAAGGCGTAAGCTTGCAAGCAGTAACACTTGCAGAT...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAGGCAGTATGGAATGCTaGCAAGTCTTGAGCTACAAT +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQGSMEC*QVLSYN
Trigger: ATTGTAGCTCAAGACTTGGCAGCATTCCATACTGCC...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAGAACTGCAATCTGGGTaGCATTGGATGTTGCTACTA +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQELQSG*HWMLLL
Trigger: TAGTAGCAACATCCAATGGCACCCAGATTGCAGTTC...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAACAATCTGGGTGCCATTaGATGTTGCTACTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQQSGCH*MLLLRS
Trigger: TGACCTTAGTAGCAACATCCAATGGCACCCAGATTG...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTTAATCATCCAACCCTaGCGTTTCTCCTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVLIIQP*RFSLLD
Trigger: ATCCAACAAGGAGAAACGCCAGGGTTGGATGATTAA...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTTCTCTCCACTCTGTTaGGATTTAGCAGTTACTCTT +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVFSPLC*DLAVTL
Trigger: AAGAGTAACTGCTAAATCTCAACAGAGTGGAGAGAA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGCTCCTGTATGAGTTCTaGCGTGACTTTTTAATCCAT +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVLLYEF*RDFLIH
Trigger: ATGGATTAAAAAGTCACGTCAGAACTCATACAGGAG...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAATGAGTGTAACTTGTTaGCTCAGTCCAGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLMSVTC*LSPDWV
Trigger: AACCCAATCTGGACTGAGTCAACAAGTTACACTCAT...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAATGAGTGTAACTTGTTaGCTCAGTCCAGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQMSVTC*LSPDWV
Trigger: AACCCAATCTGGACTGAGTCAACAAGTTACACTCAT...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGAACTGGGGAAATATCTaGAGGCTTTACACCCTTTAT +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVNWGNI*RLYTLY
Trigger: ATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTT...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAAATGGACACCTTTGCTaGATACTGTTCCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTNGHLC*ILFQST
Trigger: AGTGCTTTGGAACAGTATGCAGCAAAGGTGTCCATT...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAATCAATGGACACCTTTaGTGCATACTGTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQINGHL*CILFQS
Trigger: GCTTTGGAACAGTATGCAGCAAAGGTGTCCATTGAT...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR GCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGATATTCACATCGAAATaGCTTCTCTCCACTCTGTTG +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVIFTSK*LLSTLL
Trigger: CAACAGAGTGGAGAGAAGGCATTTCGATGTGAATAT...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTTTCACTTCCATCAATaGACACCTTTGCTGCATACT +
Preference number: 4 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVFHFHQ*TPLLHT
Trigger: AGTATGCAGCAAAGGTGTCCATTGATGGAAGTGAAA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATAATTTGTTGCACTaGCAAATGCCCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLYNLLH*QMPSHI
Trigger: GATGTGGGAGGGCATTTGCCAGTGCAACAAATTATA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAGAGGTCTGGTTTCTGTaGTTACTAAGTGATGGCTAT +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQEVWFL*LLSDGY
Trigger: ATAGCCATCACTTAGTAACCACAGAAACCAGACCTC...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACACTAAGGTCAGAGGTCTaGTTTCTGTGGTTACTAAGT +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTLRSEV*FLWLLS
Trigger: ACTTAGTAACCACAGAAACCAGACCTCTGACCTTAG...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATTAATCATCCAACCCTaGCGTTTCTCCTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLLIIQP*RFSLLD
Trigger: ATCCAACAAGGAGAAACGCCAGGGTTGGATGATTAA...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAATTCAGCTTGAAGAGCTaGTTTTTAACAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQFSLKS*FLTGMG
Trigger: TCCCATCCCTGTTAAAAACCAGCTCTTCAAGCTGAA...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAATTCTCTCCACTCTGTTaGGATTTAGCAGTTACTCTT +
Preference number: 4 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQFSPLC*DLAVTL
Trigger: AAGAGTAACTGCTAAATCTCAACAGAGTGGAGAGAA...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR TCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTACACAATGAATCACTCTaGGAATCTATTCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLHNESL*ESIPRV
Trigger: AACCCTTGGAATAGATTCTCAGAGTGATTCATTGTG...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR GCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACACTCCTTCTGCTTTATTaGTCCATTGTTCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTLLLLY*SIVLRI
Trigger: AATCCTCAGAACAATGGAGCAATAAAGCAGAAGGAG...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTACAGTTGTAAGGTTTaGAATGAGTGTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVYSCKV*NECGQH
Trigger: ATGTTGTCCACACTCATTCCAAACCTTACAACTGTA...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR TCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACACTTCCTTGTACACAATaGATCACTCTGAGAATCTAT +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTLPCTQ*ITLRIY
Trigger: ATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAG...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAGTAACATACGTAATCTaGGACCCTTTAAGAACATCT +
Preference number: 4 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTVTYVI*DPLRTS
Trigger: AGATGTTCTTAAAGGGTCCCAGATTACGTATGTTAC...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAGTAACATACGTAATCTaGGACCCTTTAAGAACATCT +
Preference number: 4 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLVTYVI*DPLRTS
Trigger: AGATGTTCTTAAAGGGTCCCAGATTACGTATGTTAC...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CCA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGATCCATAATGGCTTTTaGAATTACGATTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LKALHPLLSIMAFGITIVIHNGF*NYDCVT
Trigger: TGTCACACAATCGTAATTCCAAAAGCCATTATGGAT...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS GCA 90 bp GCCGAGGCCCTTGGTCTTGCTCTAGGGCTCTGCATTCCCGAGAGCTaGTGTATGCCGGGGATTGGCTTCCAAGCCTGCCTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: AEALGLALGLCIPES*CMPGIGFQACLSFS
Trigger: GGAGAAGCTCAGGCAGGCTTGGAAGCCAATCCCCGGCATACAGCAGCTCTCGGGAATGCAGAGCCCTAGAGCAAGACCAAGGGCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS GCA 90 bp AGGCTCTCAGTGTCGGCCGAGGCCCTTGGTCTTGCTCTAGGGCTCTaGATTCCCGAGAGCTGCTGTATGCCGGGGATTGGCTTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: RLSVSAEALGLALGL*IPESCCMPGIGFQA
Trigger: GGCTTGGAAGCCAATCCCCGGCATACAGCAGCTCTCGGGAATGCAGAGCCCTAGAGCAAGACCAAGGGCCTCGGCCGACACTGAGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS CCA 90 bp CTTGACCTGGGGGCGGCTCAAAGAAGGCTTCCTGCTCCTCCTCGATaGGCTCAGTGTCGTTGTGGGCTGTCCGTTTGTGCATGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: LDLGAAQRRLPAPPR*AQCRCGLSVCAWPA
Trigger: CGCTGGCCATGCACAAACGGACAGCCCACAACGACACTGAGCCCATCGAGGAGGAGCAGGAAGCCTTCTTTGAGCCGCCCCCAGGTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS CCA 90 bp TGCTCTAGGGCTCTGCATTCCCGAGAGCTGCTGTATGCCGGGGATTaGCTTCCAAGCCTGCCTGAGCTTCTCCAGTCTCCCGGGCATCGC +
Preference number: 5 (lower is better)
Translates to: CSRALHSRELLYAGD*LPSLPELLQSPGHR
Trigger: GCGATGCCCGGGAGACTGGAGAAGCTCAGGCAGGCTTGGAAGCCAATCCCCGGCATACAGCAGCTCTCGGGAATGCAGAGCCCTAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS CCA 90 bp ATCTTCTACCTCTCCCTGGAGGCTCTCAGTGTCGGCCGAGGCCCTTaGTCTTGCTCTAGGGCTCTGCATTCCCGAGAGCTGCTGTATGCC +
Preference number: 5 (lower is better)
Translates to: IFYLSLEALSVGRGP*SCSRALHSRELLYA
Trigger: GGCATACAGCAGCTCTCGGGAATGCAGAGCCCTAGAGCAAGACCAAGGGCCTCGGCCGACACTGAGAGCCTCCAGGGAGAGGTAGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS TCA 90 bp CCCCTGAGTGGCTCGCGCAAAGTGCAGAATCAAAGCTCCTGTGTCTaGCTGGTTGACATAACCGCTTATCCCAGACGGACCCCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: PLSGSRKVQNQSSCV*LVDITAYPRRTPPH
Trigger: GTGAGGCGGGGTCCGTCTGGGATAAGCGGTTATGTCAACCAGTCAGACACAGGAGCTTTGATTCTGCACTTTGCGCGAGCCACTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS GCA 90 bp TGCTCCTCCTCGATGGGCTCAGTGTCGTTGTGGGCTGTCCGTTTGTaGATGGCCAGCGTGGAGATCTGCTTGTATGTCTTCCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: CSSSMGSVSLWAVRL*MASVEICLYVFPQW
Trigger: CCACTGTGGGAAGACATACAAGCAGATCTCCACGCTGGCCATGCACAAACGGACAGCCCACAACGACACTGAGCCCATCGAGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS TCA 90 bp TTCTGTACCCTCAGCAGTAACCATAGCAACAGAGTGCGTTCCTGCTaGGGAGATGACTGCATCATGGGCGGGGACTGTGATGGGCGTGCC +
Preference number: 5 (lower is better)
Translates to: FCTLSSNHSNRVRSC*GDDCIMGGDCDGRA
Trigger: GGCACGCCCATCACAGTCCCCGCCCATGATGCAGTCATCTCCTCAGCAGGAACGCACTCTGTTGCTATGGTTACTGCTGAGGGTACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS GCA 90 bp GAGATGACTGCATCATGGGCGGGGACTGTGATGGGCGTGCCATCCTaGGTTACCATTGTGATGGTGTTGCCAATGGCCTGCATGTCAGCT +
Preference number: 5 (lower is better)
Translates to: EMTASWAGTVMGVPS*VTIVMVLPMACMSA
Trigger: AGCTGACATGCAGGCCATTGGCAACACCATCACAATGGTAACGCAGGATGGCACGCCCATCACAGTCCCCGCCCATGATGCAGTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CCA 90 bp CCTCCTCGATGGGCTCAGTGTCGTTGTGGGCTGTCCGTTTGTGCATaGCCAGCGTGGAGATCTGCTTGTATGTCTTCCCACAGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: PPRWAQCRCGLSVCA*PAWRSACMSSHSGY
Trigger: GTAACCACTGTGGGAAGACATACAAGCAGATCTCCACGCTGGCCATGCACAAACGGACAGCCCACAACGACACTGAGCCCATCGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS CCA 90 bp ACCATAGCAACAGAGTGCGTTCCTGCTGAGGAGATGACTGCATCATaGGCGGGGACTGTGATGGGCGTGCCATCCTGCGTTACCATTGTG +
Preference number: 5 (lower is better)
Translates to: TIATECVPAEEMTAS*AGTVMGVPSCVTIV
Trigger: CACAATGGTAACGCAGGATGGCACGCCCATCACAGTCCCCGCCCATGATGCAGTCATCTCCTCAGCAGGAACGCACTCTGTTGCTATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS TCA 90 bp TGGCTCGCGCAAAGTGCAGAATCAAAGCTCCTGTGTCTGACTGGTTaGCATAACCGCTTATCCCAGACGGACCCCGCCTCACTGACTAGC +
Preference number: 5 (lower is better)
Translates to: WLAQSAESKLLCLTG*HNRLSQTDPASLTS
Trigger: GCTAGTCAGTGAGGCGGGGTCCGTCTGGGATAAGCGGTTATGTCAACCAGTCAGACACAGGAGCTTTGATTCTGCACTTTGCGCGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS TCA 90 bp CATCTTCTACTGACGTCAGCCAAGCCTGACTTTACAGCCCGCCCCTaGGTGGCTCGCGCAAAGTGCAGAATCAAAGCTCCTGTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: HLLLTSAKPDFTARP*VARAKCRIKAPVSD
Trigger: GTCAGACACAGGAGCTTTGATTCTGCACTTTGCGCGAGCCACTCAGGGGCGGGCTGTAAAGTCAGGCTTGGCTGACGTCAGTAGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS-3UTR CAA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGGTTCTCCCGGTGGGCTaGCCGGAGTGCGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLVLPVG*PECVLQ
Trigger: CTGCAGAACGCACTCCGGCAAGCCCACCGGGAGAAC...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS GCA 90 bp ACTGATGGTGTCAGGGTCAATTGTAGCATCCCCAGTGTGCAGACCTaGCACTGTCCCATCAGCCTGAATTGCCAAGATGGTGTCAGACTG +
Preference number: 5 (lower is better)
Translates to: TDGVRVNCSIPSVQT*HCPISLNCQDGVRL
Trigger: CAGTCTGACACCATCTTGGCAATTCAGGCTGATGGGACAGTGGCAGGTCTGCACACTGGGGATGCTACAATTGACCCTGACACCATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000438144.6
ENST00000530463.5
ENST00000533542.5
CDS-3UTR CAA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGGCACAGCGTAACATGTaGCGCCTCCATCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLAQRNM*RLHPSS
Trigger: GGAGGAGGGATGGAGGCGCAACATGTTACGCTGTGC...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTGTCCCCTGTACTTTTAGGTATGGGTACATGTTGAACATAGGCCGCAGAACCGCACAGCGTAACATGTaGCGCCTCCATCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TVPCTFRYGYMLNIGRRTAQRNM*RLHPSS
Trigger: GGAGGAGGGATGGAGGCGCAACATGTTACGCTGTGC...GGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTACAGGGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR CAA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGTTGTGGGCTGTCCGTTaGTGCATGGCCAGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLLWAVR*CMASVE
Trigger: CTCCACGCTGGCCATGCACAAACGGACAGCCCACAA...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS GCA 90 bp ACTGAGGACAGTATGCCTTGGTACTCACCTGAACTGCAATCTGGGTaGCATTGGATGTTGCTACTAAGGTCAGAGGTCTGGTTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: TEDSMPWYSPELQSG*HWMLLLRSEVWFLW
Trigger: CCACAGAAACCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCCAGATTGCAGTTCAGGTGAGTACCAAGGCATACTGTCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS CCA 90 bp GGGTGCCATTGGATGTTGCTACTAAGGTCAGAGGTCTGGTTTCTGTaGTTACTAAGTGATGGCTATGCTGCTGGTGCCCCATTTCTGATG +
Preference number: 5 (lower is better)
Translates to: GCHWMLLLRSEVWFL*LLSDGYAAGAPFLM
Trigger: CATCAGAAATGGGGCACCAGCAGCATAGCCATCACTTAGTAACCACAGAAACCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
ENST00000532305.1
CDS-3UTR CAA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAAGCGTGGAGATCTGCTaGTATGTCTTCCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPESVEIC*YVFPQW
Trigger: CCACTGTGGGAAGACATACAAGCAGATCTCCACGCT...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTTTGTGGGCTGTCCGTTaGTGCATGGCCAGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: TADTLLTGEISEGFTPFILWAVR*CMASVE
Trigger: CTCCACGCTGGCCATGCACAAACGGACAGCCCACAA...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCATGGGCTCAGTGTCGTaGTGGGCTGTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSMGSVS*WAVRLC
Trigger: GCACAAACGGACAGCCCACAACGACACTGAGCCCAT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTGGTTACTGTGGCTACTaGTGTAGAAACAACGTCGTC +
Preference number: 5 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFGYCGY*CRNNVV
Trigger: GACGACGTTGTTTCTACACAAGTAGCCACAGTAACC...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS GCA 90 bp AAAGTTGAAAGCTATGAGCAGCACTGCTGTCGACTGAGGACAGTATaGCTTGGTACTCACCTGAACTGCAATCTGGGTGCCATTGGATGT +
Preference number: 5 (lower is better)
Translates to: KVESYEQHCCRLRTV*LGTHLNCNLGAIGC
Trigger: ACATCCAATGGCACCCAGATTGCAGTTCAGGTGAGTACCAAGGCATACTGTCCTCAGTCGACAGCAGTGCTGCTCATAGCTTTCAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS-3UTR CAA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACAGCACAGCGTAACATGTaGCGCCTCCATCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RTKTADTLLTGEISEGFTAQRNM*RLHPSS
Trigger: GGAGGAGGGATGGAGGCGCAACATGTTACGCTGTGC...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAAGGTATGGGTACATGTaGAACATAGGCCGCAGAACC +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERRYGYM*NIGRRT
Trigger: GGTTCTGCGGCCTATGTTCAACATGTACCCATACCT...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAGGCCTGCATGTCAGCTaGAGATATGTTGACATGCTG +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERGLHVS*RYVDML
Trigger: CAGCATGTCAACATATCTCAAGCTGACATGCAGGCC...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAACCATTGTGATGGTGTaGCCAATGGCCTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERTIVMV*PMACMS
Trigger: TGACATGCAGGCCATTGGCAACACCATCACAATGGT...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAGCAATCTGGGTGCCATaGGATGTTGCTACTAAGGTC +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERAIWVP*DVATKV
Trigger: GACCTTAGTAGCAACATCCAATGGCACCCAGATTGC...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAACCCTGGCGTTTCTCCTaGTTGGATTCTAGACGCTAT +
Preference number: 5 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEPWRFS*LDSRRY
Trigger: ATAGCGTCTAGAATCCAACAAGGAGAAACGCCAGGG...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTTCTACCTCCGA +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNIFYLR
Trigger: TCGGAGGTAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000496276.5
ENST00000530463.5
ENST00000533542.5
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTTCTACCTCTCC +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNIFYLS
Trigger: GGAGAGGTAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS GCA 90 bp TATACACGAAGCACAGTGTACAAAGTTGAAAGCTATGAGCAGCACTaGTGTCGACTGAGGACAGTATGCCTTGGTACTCACCTGAACTGC +
Preference number: 5 (lower is better)
Translates to: YTRSTVYKVESYEQH*CRLRTVCLGTHLNC
Trigger: GCAGTTCAGGTGAGTACCAAGGCATACTGTCCTCAGTCGACAGCAGTGCTGCTCATAGCTTTCAACTTTGTACACTGTGCTTCGTGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS CCA 90 bp GACAGTATGCCTTGGTACTCACCTGAACTGCAATCTGGGTGCCATTaGATGTTGCTACTAAGGTCAGAGGTCTGGTTTCTGTGGTTACTA +
Preference number: 5 (lower is better)
Translates to: DSMPWYSPELQSGCH*MLLLRSEVWFLWLL
Trigger: TAGTAACCACAGAAACCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCCAGATTGCAGTTCAGGTGAGTACCAAGGCATACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS-3UTR CAA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGTGCAAGTGTTACTGCTaGCAAGCTTACGCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLCKCYC*QAYAFH
Trigger: ATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGCA...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCGTCAGACTGCGGGACTaGCACTGCATGGTGGATATA +
Preference number: 5 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSVRLRD*HCMVDI
Trigger: TATATCCACCATGCAGTGCAAGTCCCGCAGTCTGAC...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTGGTTTTTATAATTTGTaGCACTGGCAAATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFGFYNL*HWQMPS
Trigger: GGAGGGCATTTGCCAGTGCAACAAATTATAAAAACC...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCAAGAACATCTTCACCTaGACCTGGGGGCGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSKNIFT*TWGRLK
Trigger: TTTGAGCCGCCCCCAGGTCAAGGTGAAGATGTTCTT...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGATTGACTCAGTCCAGATaGGGTTACTGTGGCTACTTG +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERLTQSR*GYCGYL
Trigger: CAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAA...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTGGATATGAGTGTAACTaGTTGACTCAGTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFGYECN*LTQSRL
Trigger: CAATCTGGACTGAGTCAACAAGTTACACTCATATCC...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAAGTCTTGAGCTACAATaGCAACCTGTTCCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERSLELQ*QPVPLL
Trigger: CAGAAGGGGAACAGGTTGCAATTGTAGCTCAAGACT...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTTCTACCTTCCA +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNIFYLP
Trigger: TGGAAGGTAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412390.6
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTTCTCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNIFSEK
Trigger: TTTCTCGGAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438144.6
ENST00000526657.5
ENST00000532577.5
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGGCACAGCGTAACATGTaGCGCCTCCATCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVAQRNM*RLHPSS
Trigger: GGAGGAGGGATGGAGGCGCAACATGTTACGCTGTGC...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGAGGTATGGGTACATGTaGAACATAGGCCGCAGAACC +
Preference number: 5 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLRYGYM*NIGRRT
Trigger: GGTTCTGCGGCCTATGTTCAACATGTACCCATACCT...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CGCAGAACCATCTTCCAACTGAATGACCTGGCCATCTATGAGTTTTGCATACAAAGGTATGGGTACATGTaGAACATAGGCCGCAGAACC +
Preference number: 5 (lower is better)
Translates to: RRTIFQLNDLAIYEFCIQRYGYM*NIGRRT
Trigger: GGTTCTGCGGCCTATGTTCAACATGTACCCATACCT...TTGTATGCAAAACTCATAGATGGCCAGGTCATTCAGTTGGAAGATGGTTCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR CAA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTGTCAGACTGCGGGACTaGCACTGCATGGTGGATATA +
Preference number: 5 (lower is better)
Translates to: TADTLLTGEISEGFTPFIVRLRD*HCMVDI
Trigger: TATATCCACCATGCAGTGCAAGTCCCGCAGTCTGAC...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCATCAATGGACACCTTaGCTGCATACTGTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCHQWTP*LHTVPK
Trigger: CTTTGGAACAGTATGCAGCAAAGGTGTCCATTGATG...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp GGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTTATTCTGTAAACCTTTaGTCACACCCAGGAACTGTA +
Preference number: 5 (lower is better)
Translates to: GPGFMDFCCQKMKDSFCFYSVNL*SHPGTV
Trigger: TACAGTTCCTGGGTGTGACAAAAGGTTTACAGAATA...AAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGGCAATCTGGGTGCCATaGGATGTTGCTACTAAGGTC +
Preference number: 5 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLAIWVP*DVATKV
Trigger: GACCTTAGTAGCAACATCCAATGGCACCCAGATTGC...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCCCTGGCGTTTCTCCTaGTTGGATTCTAGACGCTAT +
Preference number: 5 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLPWRFS*LDSRRY
Trigger: ATAGCGTCTAGAATCCAACAAGGAGAAACGCCAGGG...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCCCCTGGCGTTTCTCCTaGTTGGATTCTAGACGCTAT +
Preference number: 5 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSPWRFS*LDSRRY
Trigger: ATAGCGTCTAGAATCCAACAAGGAGAAACGCCAGGG...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTTCTACCGTTTT +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNIFYRF
Trigger: AAAACGGTAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417726.1
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTTCTACCTTGAA +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNIFYLE
Trigger: TTCAAGGTAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527597.1
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTCCGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNISEKI
Trigger: AATTTTCTCGGAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534265.5
CDS-3UTR CAA 90 bp CGCAGAACCATCTTCCAACTGAATGACCTGGCCATCTATGAGTTTTGCATACAATGCAAGTGTTACTGCTaGCAAGCTTACGCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RRTIFQLNDLAIYEFCIQCKCYC*QAYAFH
Trigger: ATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGCA...TTGTATGCAAAACTCATAGATGGCCAGGTCATTCAGTTGGAAGATGGTTCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR CAA 90 bp AGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCTTCTCTCCACTCTGTaGAGATTTAGCAGTTACTCT +
Preference number: 5 (lower is better)
Translates to: RNGKLLIFLGPGFMDFCCLLSTL*RFSSYS
Trigger: AGAGTAACTGCTAAATCTCAACAGAGTGGAGAGAAG...GCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAACTTCTCTCCACTCTGTaGAGATTTAGCAGTTACTCT +
Preference number: 5 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPELLSTL*RFSSYS
Trigger: AGAGTAACTGCTAAATCTCAACAGAGTGGAGAGAAG...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAGGTTTTTATAATTTGTaGCACTGGCAAATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERGFYNL*HWQMPS
Trigger: GGAGGGCATTTGCCAGTGCAACAAATTATAAAAACC...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATTGTGGGCTGTCCGTTaGTGCATGGCCAGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTLWAVR*CMASVE
Trigger: CTCCACGCTGGCCATGCACAAACGGACAGCCCACAA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTTCATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTGCTCCGGTTACTGTGGCTACTaGTGTAGAAACAACGTCGTC +
Preference number: 5 (lower is better)
Translates to: LHGFLLPEDERLLLLYCSGYCGY*CRNNVV
Trigger: GACGACGTTGTTTCTACACAAGTAGCCACAGTAACC...GGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGAGGATATGAGTGTAACTaGTTGACTCAGTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERGYECN*LTQSRL
Trigger: CAATCTGGACTGAGTCAACAAGTTACACTCATATCC...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGGGATATGAGTGTAACTaGTTGACTCAGTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLGYECN*LTQSRL
Trigger: CAATCTGGACTGAGTCAACAAGTTACACTCATATCC...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTGGCCTGCATGTCAGCTaGAGATATGTTGACATGCTG +
Preference number: 5 (lower is better)
Translates to: TADTLLTGEISEGFTPFIGLHVS*RYVDML
Trigger: CAGCATGTCAACATATCTCAAGCTGACATGCAGGCC...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGAGTCTTGAGCTACAATaGCAACCTGTTCCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLSLELQ*QPVPLL
Trigger: CAGAAGGGGAACAGGTTGCAATTGTAGCTCAAGACT...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGGAATGCTGCCAAGTCTaGAGCTACAATTGCAACCTG +
Preference number: 5 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLECCQV*SYNCNL
Trigger: CAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATTC...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATTGGCGTTTCTCCTTGTaGGATTCTAGACGCTATTCT +
Preference number: 5 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDWRFSL*DSRRYS
Trigger: AGAATAGCGTCTAGAATCCAACAAGGAGAAACGCCA...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGACTCCTTCTGCTTTATaGCTCCATTGTTCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: QEWKTSNFPGPGLHGFLLTPSAL*LHCSED
Trigger: ATCCTCAGAACAATGGAGCAATAAAGCAGAAGGAGT...CAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS TCA 90 bp ACATGTTGCGCCTCCATCCCTCCTCCAGGAAACTCTGTCATTCCCTaGGAATCTCGATTTATTTGGGCTAACAACATCTTCTACTTGATT +
Preference number: 5 (lower is better)
Translates to: TCCASIPPPGNSVIP*ESRFIWANNIFYLI
Trigger: AATCAAGTAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414370.5
CDS GCA 90 bp CATGGATTTCTGCTGCCAGAAGATGAAAGACTCCTTCTGCTTTATTaGTCCATTGTTCTGAGGATTAATCATCCAACCCTGGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: HGFLLPEDERLLLLY*SIVLRINHPTLAFL
Trigger: GAGAAACGCCAGGGTTGGATGATTAATCCTCAGAACAATGGAGCAATAAAGCAGAAGGAGTCTTTCATCTTCTGGCAGCAGAAATCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
ENST00000532305.1
CDS CCA 90 bp TTTCTCCTGTGTGTATCCTCACATGGTTTTTATAATTTGTTGCACTaGCAAATGCCCTCCCACATCCTGGCTCTGTGCAGTAATAAGGTC +
Preference number: 5 (lower is better)
Translates to: FLLCVSSHGFYNLLH*QMPSHILALCSNKV
Trigger: GACCTTATTACTGCACAGAGCCAGGATGTGGGAGGGCATTTGCCAGTGCAACAAATTATAAAAACCATGTGAGGATACACACAGGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS-3UTR CAA 90 bp TATCAGGAATGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCATCAATGGACACCTTaGCTGCATACTGTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: YQEWKTSNFPGPGLHGFLHQWTP*LHTVPK
Trigger: CTTTGGAACAGTATGCAGCAAAGGTGTCCATTGATG...CAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCATTCCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATGAAAGATATTCTGTAAACCTTTaGTCACACCCAGGAACTGTA +
Preference number: 5 (lower is better)
Translates to: SNFPGPGLHGFLLPEDERYSVNL*SHPGTV
Trigger: TACAGTTCCTGGGTGTGACAAAAGGTTTACAGAATA...TCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAATGGGCTCAGTGTCGTaGTGGGCTGTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTMGSVS*WAVRLC
Trigger: GCACAAACGGACAGCCCACAACGACACTGAGCCCAT...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAATGGGCTCAGTGTCGTaGTGGGCTGTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQMGSVS*WAVRLC
Trigger: GCACAAACGGACAGCCCACAACGACACTGAGCCCAT...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATTATGAGTGTAACTTGTaGACTCAGTCCAGATTGGGT +
Preference number: 5 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDYECNL*TQSRLG
Trigger: ACCCAATCTGGACTGAGTCAACAAGTTACACTCATA...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTGAATGCTGCCAAGTCTaGAGCTACAATTGCAACCTG +
Preference number: 5 (lower is better)
Translates to: TADTLLTGEISEGFTPFIECCQV*SYNCNL
Trigger: CAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATTC...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp TGGAAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAAAGACTTTACTAGTCTaGCATGTAGACTCTAGGAGT +
Preference number: 5 (lower is better)
Translates to: WKTSNFPGPGLHGFLLPEKTLLV*HVDSRS
Trigger: ACTCCTAGAGTCTACATGCAAGACTAGTAAAGTCTT...TTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CCCTGTACTTTTAGGTATGGGTACATGTTGAACATAGGCCGCAGAACCATCTTCAAGCTCGTGTTCATCTaGATTCTTCCCTCAATGTTC +
Preference number: 5 (lower is better)
Translates to: PCTFRYGYMLNIGRRTIFKLVFI*ILPSMF
Trigger: GAACATTGAGGGAAGAATCAAGATGAACACGAGCTT...GAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGGTCAGACTGCGGGACTaGCACTGCATGGTGGATATA +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVVRLRD*HCMVDI
Trigger: TATATCCACCATGCAGTGCAAGTCCCGCAGTCTGAC...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGAAGAACATCTTCACCTaGACCTGGGGGCGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVKNIFT*TWGRLK
Trigger: TTTGAGCCGCCCCCAGGTCAAGGTGAAGATGTTCTT...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGAAGAACATCTTCACCTaGACCTGGGGGCGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVKNIFT*TWGRLK
Trigger: TTTGAGCCGCCCCCAGGTCAAGGTGAAGATGTTCTT...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACAGAATGCTGCCAAGTCTaGAGCTACAATTGCAACCTG +
Preference number: 5 (lower is better)
Translates to: RTKTADTLLTGEISEGFTECCQV*SYNCNL
Trigger: CAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATTC...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGGGGTGCCATTGGATGTaGCTACTAAGGTCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVGCHWM*LLRSEV
Trigger: GACCTCTGACCTTAGTAGCAACATCCAATGGCACCC...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp AAAACTTCTAATTTTCCTGGGCCCGGGCTTCATGGATTTCTGCTGCCAGAAGATAAGACTTTACTAGTCTaGCATGTAGACTCTAGGAGT +
Preference number: 5 (lower is better)
Translates to: KTSNFPGPGLHGFLLPEDKTLLV*HVDSRS
Trigger: ACTCCTAGAGTCTACATGCAAGACTAGTAAAGTCTT...ATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGAAAATTAGAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAAGCGTGGAGATCTGCTaGTATGTCTTCCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTSVEIC*YVFPQW
Trigger: CCACTGTGGGAAGACATACAAGCAGATCTCCACGCT...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGACCATTGTGATGGTGTaGCCAATGGCCTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVTIVMV*PMACMS
Trigger: TGACATGCAGGCCATTGGCAACACCATCACAATGGT...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAGGGTGCCATTGGATGTaGCTACTAAGGTCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQGCHWM*LLRSEV
Trigger: GACCTCTGACCTTAGTAGCAACATCCAATGGCACCC...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACATGGCGTTTCTCCTTGTaGGATTCTAGACGCTATTCT +
Preference number: 5 (lower is better)
Translates to: RTKTADTLLTGEISEGFTWRFSL*DSRRYS
Trigger: AGAATAGCGTCTAGAATCCAACAAGGAGAAACGCCA...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTGCAAGTGTTACTGCTaGCAAGCTTACGCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVCKCYC*QAYAFH
Trigger: ATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGCA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGCAAGTGTTACTGCTaGCAAGCTTACGCCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVCKCYC*QAYAFH
Trigger: ATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGCA...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACACCCTTTATTTATTCTGTAAACCTTTaGTCACACCCAGGAACTGTA +
Preference number: 5 (lower is better)
Translates to: TADTLLTGEISEGFTPFIYSVNL*SHPGTV
Trigger: TACAGTTCCTGGGTGTGACAAAAGGTTTACAGAATA...AATAAAGGGTGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGGGTTACTGTGGCTACTaGTGTAGAAACAACGTCGTC +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVGYCGY*CRNNVV
Trigger: GACGACGTTGTTTCTACACAAGTAGCCACAGTAACC...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp CTGAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTTGACTCAGTCCAGATaGGGTTACTGTGGCTACTTG +
Preference number: 5 (lower is better)
Translates to: LKALHPLLSIMAFGITIVLTQSR*GYCGYL
Trigger: CAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAA...CACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp AGAACAAAAACCGCAGACACTCTACTAACTGGGGAAATATCTGAAGGCTTTACATATGAGTGTAACTTGTaGACTCAGTCCAGATTGGGT +
Preference number: 5 (lower is better)
Translates to: RTKTADTLLTGEISEGFTYECNL*TQSRLG
Trigger: ACCCAATCTGGACTGAGTCAACAAGTTACACTCATA...TGTAAAGCCTTCAGATATTTCCCCAGTTAGTAGAGTGTCTGCGGTTTTTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS-3UTR CAA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAGGCCTGCATGTCAGCTaGAGATATGTTGACATGCTG +
Preference number: 5 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLGLHVS*RYVDML
Trigger: CAGCATGTCAACATATCTCAAGCTGACATGCAGGCC...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAGCAATCTGGGTGCCATaGGATGTTGCTACTAAGGTC +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTAIWVP*DVATKV
Trigger: GACCTTAGTAGCAACATCCAATGGCACCCAGATTGC...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS TCA 90 bp CCACATCCATCATATTCACATCGAAATGCCTTCTCTCCACTCTGTTaGGATTTAGCAGTTACTCTTGTAGCATGTCCTTGTAAAACAATC +
Preference number: 5 (lower is better)
Translates to: PHPSYSHRNAFSPLC*DLAVTLVACPCKTI
Trigger: GATTGTTTTACAAGGACATGCTACAAGAGTAACTGCTAAATCTCAACAGAGTGGAGAGAAGGCATTTCGATGTGAATATGATGGATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATTGACTCAGTCCAGATaGGGTTACTGTGGCTACTTG +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTLTQSR*GYCGYL
Trigger: CAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TTTCATACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTAAGTCTTGAGCTACAATaGCAACCTGTTCCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: FHTSLYTMNHSENLFQGLSLELQ*QPVPLL
Trigger: CAGAAGGGGAACAGGTTGCAATTGTAGCTCAAGACT...TAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp TTTAGGTATGGGTACATGTTGAACATAGGCCGCAGAACCATCTTCCAACTGAATTCCTTTAGAATTGTGTaGTATGTAAGCAGTAGAACC +
Preference number: 5 (lower is better)
Translates to: FRYGYMLNIGRRTIFQLNSFRIV*YVSSRT
Trigger: GGTTCTACTGCTTACATACAACACAATTCTAAAGGA...ATTCAGTTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496276.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATCCATATTTTCTAAGTaGTCACCATCTGCCACGGTG +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTSIFSK*SPSATV
Trigger: CACCGTGGCAGATGGTGACAACTTAGAAAATATGGA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp GAAGGCTTTACACCCTTTATTATCCATAATGGCTTTTGGAATTACGATTGTGTGTATGAGTGTAACTTGTaGACTCAGTCCAGATTGGGT +
Preference number: 5 (lower is better)
Translates to: EGFTPFIIHNGFWNYDCVYECNL*TQSRLG
Trigger: ACCCAATCTGGACTGAGTCAACAAGTTACACTCATA...CACACAATCGTAATTCCAAAAGCCATTATGGATAATAAAGGGTGTAAAGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACATGGCGTTTCTCCTTGTaGGATTCTAGACGCTATTCT +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTWRFSL*DSRRYS
Trigger: AGAATAGCGTCTAGAATCCAACAAGGAGAAACGCCA...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACACTTCTCTCCACTCTGTaGAGATTTAGCAGTTACTCT +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTLLSTL*RFSSYS
Trigger: AGAGTAACTGCTAAATCTCAACAGAGTGGAGAGAAG...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACTTCCTTGTACACAATGAATCACTCTGAGAATCTATTCCAAGGGTTATATACAACTCCTTCTGCTTTATaGCTCCATTGTTCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: TSLYTMNHSENLFQGLYTTPSAL*LHCSED
Trigger: ATCCTCAGAACAATGGAGCAATAAAGCAGAAGGAGT...TGTATATAACCCTTGGAATAGATTCTCAGAGTGATTCATTGTGTACAAGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
CDS-3UTR CAA 90 bp ACAGGGATGGGAAACTATAAATTATTCAAACAGTCTGCAAACCATGAGATACAAAAGACTTTACTAGTCTaGCATGTAGACTCTAGGAGT +
Preference number: 5 (lower is better)
Translates to: TGMGNYKLFKQSANHEIQKTLLV*HVDSRS
Trigger: ACTCCTAGAGTCTACATGCAAGACTAGTAAAGTCTT...TTGTATCTCATGGTTTGCAGACTGTTTGAATAATTTATAGTTTCCCATCCCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299606.6
ENST00000396602.7
CDS CCA 72 bp CCCACAGGGGCGAGGAGGCGGCTTTGGTTCTCCCGGTaGGCTTGCCGGAGTGCGTTCTGCAGACCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: PTGARRRLWFSR*ACRSAFCRPEG
Trigger: CCCTTCTGGTCTGCAGAACGCACTCCGGCAAGCCCACCGGGAGAACCAAAGCCGCCTCCTCGCCCCTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS GCA 72 bp GTGTCGGCCGAGGCCCTTGGTCTTGCTCTAGGGCTCTaGATTCCCGAGAGCTGCTGTATGCCGGGGATTGGC +
Preference number: 6 (lower is better)
Translates to: VSAEALGLALGL*IPESCCMPGIG
Trigger: GCCAATCCCCGGCATACAGCAGCTCTCGGGAATGCAGAGCCCTAGAGCAAGACCAAGGGCCTCGGCCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS CCA 72 bp CTCTCCCTGGAGGCTCTCAGTGTCGGCCGAGGCCCTTaGTCTTGCTCTAGGGCTCTGCATTCCCGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: LSLEALSVGRGP*SCSRALHSREL
Trigger: CAGCTCTCGGGAATGCAGAGCCCTAGAGCAAGACCAAGGGCCTCGGCCGACACTGAGAGCCTCCAGGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS GCA 72 bp GAGGCGGCTTTGGTTCTCCCGGTGGGCTTGCCGGAGTaGGTTCTGCAGACCAGAAGGGCTTTGTCTGGCGAT +
Preference number: 6 (lower is better)
Translates to: EAALVLPVGLPE*VLQTRRALSGD
Trigger: ATCGCCAGACAAAGCCCTTCTGGTCTGCAGAACGCACTCCGGCAAGCCCACCGGGAGAACCAAAGCCGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS GCA 72 bp CTGGAGGCTCTCAGTGTCGGCCGAGGCCCTTGGTCTTaGTCTAGGGCTCTGCATTCCCGAGAGCTGCTGTAT +
Preference number: 6 (lower is better)
Translates to: LEALSVGRGPWS*SRALHSRELLY
Trigger: ATACAGCAGCTCTCGGGAATGCAGAGCCCTAGAGCAAGACCAAGGGCCTCGGCCGACACTGAGAGCCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531943.5
CDS CCA 72 bp GGGGCGGCTCAAAGAAGGCTTCCTGCTCCTCCTCGATaGGCTCAGTGTCGTTGTGGGCTGTCCGTTTGTGCA +
Preference number: 6 (lower is better)
Translates to: GAAQRRLPAPPR*AQCRCGLSVCA
Trigger: TGCACAAACGGACAGCCCACAACGACACTGAGCCCATCGAGGAGGAGCAGGAAGCCTTCTTTGAGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS GCA 72 bp GCATCATGGGCGGGGACTGTGATGGGCGTGCCATCCTaGGTTACCATTGTGATGGTGTTGCCAATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: ASWAGTVMGVPS*VTIVMVLPMAC
Trigger: GCAGGCCATTGGCAACACCATCACAATGGTAACGCAGGATGGCACGCCCATCACAGTCCCCGCCCATGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CCA 72 bp ACAGAGTGCGTTCCTGCTGAGGAGATGACTGCATCATaGGCGGGGACTGTGATGGGCGTGCCATCCTGCGTT +
Preference number: 6 (lower is better)
Translates to: TECVPAEEMTAS*AGTVMGVPSCV
Trigger: AACGCAGGATGGCACGCCCATCACAGTCCCCGCCCATGATGCAGTCATCTCCTCAGCAGGAACGCACTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS TCA 72 bp CTGACGTCAGCCAAGCCTGACTTTACAGCCCGCCCCTaGGTGGCTCGCGCAAAGTGCAGAATCAAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: LTSAKPDFTARP*VARAKCRIKAP
Trigger: AGGAGCTTTGATTCTGCACTTTGCGCGAGCCACTCAGGGGCGGGCTGTAAAGTCAGGCTTGGCTGACGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS GCA 72 bp CTTTGGTTCTCCCGGTGGGCTTGCCGGAGTGCGTTCTaGAGACCAGAAGGGCTTTGTCTGGCGATTGCTGAA +
Preference number: 6 (lower is better)
Translates to: LWFSRWACRSAF*RPEGLCLAIAE
Trigger: TTCAGCAATCGCCAGACAAAGCCCTTCTGGTCTGCAGAACGCACTCCGGCAAGCCCACCGGGAGAACCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS CCA 72 bp CGTCAGCCAAGCCTGACTTTACAGCCCGCCCCTGAGTaGCTCGCGCAAAGTGCAGAATCAAAGCTCCTGTGT +
Preference number: 6 (lower is better)
Translates to: RQPSLTLQPAPE*LAQSAESKLLC
Trigger: ACACAGGAGCTTTGATTCTGCACTTTGCGCGAGCCACTCAGGGGCGGGCTGTAAAGTCAGGCTTGGCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS TCA 72 bp GGGCTAACAACATCTTCTACTGACGTCAGCCAAGCCTaGCTTTACAGCCCGCCCCTGAGTGGCTCGCGCAAA +
Preference number: 6 (lower is better)
Translates to: GLTTSSTDVSQA*LYSPPLSGSRK
Trigger: TTTGCGCGAGCCACTCAGGGGCGGGCTGTAAAGTCAGGCTTGGCTGACGTCAGTAGAAGATGTTGTTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS CCA 72 bp TGGGCTCAGTGTCGTTGTGGGCTGTCCGTTTGTGCATaGCCAGCGTGGAGATCTGCTTGTATGTCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: WAQCRCGLSVCA*PAWRSACMSSH
Trigger: GTGGGAAGACATACAAGCAGATCTCCACGCTGGCCATGCACAAACGGACAGCCCACAACGACACTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS TCA 72 bp CTCAGCAGTAACCATAGCAACAGAGTGCGTTCCTGCTaGGGAGATGACTGCATCATGGGCGGGGACTGTGAT +
Preference number: 6 (lower is better)
Translates to: LSSNHSNRVRSC*GDDCIMGGDCD
Trigger: ATCACAGTCCCCGCCCATGATGCAGTCATCTCCTCAGCAGGAACGCACTCTGTTGCTATGGTTACTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS TCA 72 bp GGCTCGCGCAAAGTGCAGAATCAAAGCTCCTGTGTCTaGCTGGTTGACATAACCGCTTATCCCAGACGGACC +
Preference number: 6 (lower is better)
Translates to: GSRKVQNQSSCV*LVDITAYPRRT
Trigger: GGTCCGTCTGGGATAAGCGGTTATGTCAACCAGTCAGACACAGGAGCTTTGATTCTGCACTTTGCGCGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396604.5
CDS GCA 72 bp ACGGTGACTGCCTCTGTCAAGCACAGCGTAACATGTTaGGCCTCCATCCCTCCTCCAGGAAACTCTGTCATT +
Preference number: 6 (lower is better)
Translates to: TVTASVKHSVTC*ASIPPPGNSVI
Trigger: AATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGCAACATGTTACGCTGTGCTTGACAGAGGCAGTCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000412390.6
ENST00000414370.5
ENST00000417726.1
ENST00000438144.6
ENST00000496276.5
ENST00000526657.5
ENST00000527597.1
ENST00000530463.5
ENST00000531943.5
ENST00000532577.5
ENST00000533542.5
ENST00000534265.5
CDS GCA 72 bp GTCAGGGTCAATTGTAGCATCCCCAGTGTGCAGACCTaGCACTGTCCCATCAGCCTGAATTGCCAAGATGGT +
Preference number: 6 (lower is better)
Translates to: VRVNCSIPSVQT*HCPISLNCQDG
Trigger: ACCATCTTGGCAATTCAGGCTGATGGGACAGTGGCAGGTCTGCACACTGGGGATGCTACAATTGACCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000438144.6
ENST00000530463.5
ENST00000533542.5
CDS GCA 72 bp AGCTATGAGCAGCACTGCTGTCGACTGAGGACAGTATaGCTTGGTACTCACCTGAACTGCAATCTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: SYEQHCCRLRTV*LGTHLNCNLGA
Trigger: GGCACCCAGATTGCAGTTCAGGTGAGTACCAAGGCATACTGTCCTCAGTCGACAGCAGTGCTGCTCATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS CAA 72 bp AGCCTGAATTGCCAAGATGGTGTCAGACTGCGGGACTaGCACTGCATGGTGGATATAAGCTGTGGTACCATC +
Preference number: 6 (lower is better)
Translates to: SLNCQDGVRLRD*HCMVDISCGTI
Trigger: GATGGTACCACAGCTTATATCCACCATGCAGTGCAAGTCCCGCAGTCTGACACCATCTTGGCAATTCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000438144.6
ENST00000526657.5
ENST00000530463.5
ENST00000533542.5
ENST00000534265.5
CDS GCA 72 bp AGTATGCCTTGGTACTCACCTGAACTGCAATCTGGGTaGCATTGGATGTTGCTACTAAGGTCAGAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SMPWYSPELQSG*HWMLLLRSEVW
Trigger: CCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCCAGATTGCAGTTCAGGTGAGTACCAAGGCATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS CCA 72 bp TGGATGTTGCTACTAAGGTCAGAGGTCTGGTTTCTGTaGTTACTAAGTGATGGCTATGCTGCTGGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: WMLLLRSEVWFL*LLSDGYAAGAP
Trigger: TGGGGCACCAGCAGCATAGCCATCACTTAGTAACCACAGAAACCAGACCTCTGACCTTAGTAGCAACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
ENST00000532305.1
CDS CCA 72 bp CCTTGGTACTCACCTGAACTGCAATCTGGGTGCCATTaGATGTTGCTACTAAGGTCAGAGGTCTGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: PWYSPELQSGCH*MLLLRSEVWFL
Trigger: CAGAAACCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCCAGATTGCAGTTCAGGTGAGTACCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS CAA 72 bp CATTGTGATGGTGTTGCCAATGGCCTGCATGTCAGCTaGAGATATGTTGACATGCTGAGTCCCATCCTGGGA +
Preference number: 6 (lower is better)
Translates to: HCDGVANGLHVS*RYVDMLSPILG
Trigger: TCCCAGGATGGGACTCAGCATGTCAACATATCTCAAGCTGACATGCAGGCCATTGGCAACACCATCACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS GCA 72 bp AGCACAGTGTACAAAGTTGAAAGCTATGAGCAGCACTaGTGTCGACTGAGGACAGTATGCCTTGGTACTCAC +
Preference number: 6 (lower is better)
Translates to: STVYKVESYEQH*CRLRTVCLGTH
Trigger: GTGAGTACCAAGGCATACTGTCCTCAGTCGACAGCAGTGCTGCTCATAGCTTTCAACTTTGTACACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS CAA 72 bp GACATGCTGAGTCCCATCCTGGGATATGAGTGTAACTaGTTGACTCAGTCCAGATTGGGTTACTGTGGCTAC +
Preference number: 6 (lower is better)
Translates to: DMLSPILGYECN*LTQSRLGYCGY
Trigger: GTAGCCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTCATATCCCAGGATGGGACTCAGCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CAA 72 bp CTCCAAGCTGAACTGCAATCTGGGTGCCATTGGATGTaGCTACTAAGGTCAGAGGTCTGGTTTCTGTGGTTA +
Preference number: 6 (lower is better)
Translates to: LQAELQSGCHWM*LLRSEVWFLWL
Trigger: TAACCACAGAAACCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCCAGATTGCAGTTCAGCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
ENST00000532305.1
CDS CAA 90 bp AGTCCCATCCTGGGATATGAGTGTAACTTGTTGACTCAGTCCAGATaGGGTTACTGTGGCTACTTGTGTAGAAACAACGTCGTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: SPILGYECNLLTQSR*GYCGYLCRNNVVPF
Trigger: GAAGGGGACGACGTTGTTTCTACACAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTCATATCCCAGGATGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CAA 90 bp ATGCCTTGGTACTCACCTGAACTGCAATCTGGGTGCCATTGGATGTaGCTACTAAGGTCAGAGGTCTGGTTTCTGTGGTTACTAAGTGAT +
Preference number: 6 (lower is better)
Translates to: MPWYSPELQSGCHWM*LLRSEVWFLWLLSD
Trigger: ATCACTTAGTAACCACAGAAACCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCCAGATTGCAGTTCAGGTGAGTACCAAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS TCA 72 bp ATTTCTGATGAGGCAGTATGGAATGCTGCCAAGTCTTaGGCTACAATTGCAACCTGTTCCCCTTCTGTACCC +
Preference number: 6 (lower is better)
Translates to: ISDEAVWNAAKS*ATIATCSPSVP
Trigger: GGGTACAGAAGGGGAACAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATTCCATACTGCCTCATCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CAA 72 bp TTGTTGACTCAGTCCAGATTGGGTTACTGTGGCTACTaGTGTAGAAACAACGTCGTCCCCTTCTACACCTGT +
Preference number: 6 (lower is better)
Translates to: LLTQSRLGYCGY*CRNNVVPFYTC
Trigger: ACAGGTGTAGAAGGGGACGACGTTGTTTCTACACAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS CAA 72 bp ATGCTGAGTCCCATCCTGGGATATGAGTGTAACTTGTaGACTCAGTCCAGATTGGGTTACTGTGGCTACTTG +
Preference number: 6 (lower is better)
Translates to: MLSPILGYECNL*TQSRLGYCGYL
Trigger: CAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTCATATCCCAGGATGGGACTCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CAA 72 bp TACTCACCTGAACTGCAATCTGGGTGCCATTGGATGTaGCTACTAAGGTCAGAGGTCTGGTTTCTGTGGTTA +
Preference number: 6 (lower is better)
Translates to: YSPELQSGCHWM*LLRSEVWFLWL
Trigger: TAACCACAGAAACCAGACCTCTGACCTTAGTAGCAACATCCAATGGCACCCAGATTGCAGTTCAGGTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447186.1
CDS CAA 90 bp GAGTGTAACTTGTTGACTCAGTCCAGATTGGGTTACTGTGGCTACTaGTGTAGAAACAACGTCGTCCCCTTCTACACCTGTAACATACGT +
Preference number: 6 (lower is better)
Translates to: ECNLLTQSRLGYCGY*CRNNVVPFYTCNIR
Trigger: ACGTATGTTACAGGTGTAGAAGGGGACGACGTTGTTTCTACACAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS CCA 72 bp TGTGTATCCTCACATGGTTTTTATAATTTGTTGCACTaGCAAATGCCCTCCCACATCCTGGCTCTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: CVSSHGFYNLLH*QMPSHILALCS
Trigger: ACTGCACAGAGCCAGGATGTGGGAGGGCATTTGCCAGTGCAACAAATTATAAAAACCATGTGAGGATACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000530463.5
CDS CAA 90 bp TATGTTGACATGCTGAGTCCCATCCTGGGATATGAGTGTAACTTGTaGACTCAGTCCAGATTGGGTTACTGTGGCTACTTGTGTAGAAAC +
Preference number: 6 (lower is better)
Translates to: YVDMLSPILGYECNL*TQSRLGYCGYLCRN
Trigger: GTTTCTACACAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTCATATCCCAGGATGGGACTCAGCATGTCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CAA 90 bp AGATATGTTGACATGCTGAGTCCCATCCTGGGATATGAGTGTAACTaGTTGACTCAGTCCAGATTGGGTTACTGTGGCTACTTGTGTAGA +
Preference number: 6 (lower is better)
Translates to: RYVDMLSPILGYECN*LTQSRLGYCGYLCR
Trigger: TCTACACAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTCATATCCCAGGATGGGACTCAGCATGTCAACATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CAA 72 bp CTGGGATATGAGTGTAACTTGTTGACTCAGTCCAGATaGGGTTACTGTGGCTACTTGTGTAGAAACAACGTC +
Preference number: 6 (lower is better)
Translates to: LGYECNLLTQSR*GYCGYLCRNNV
Trigger: GACGTTGTTTCTACACAAGTAGCCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTCATATCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299606.6
ENST00000396597.7
ENST00000396602.7
ENST00000396604.5
ENST00000447186.1
ENST00000530463.5
CDS CAA 72 bp ACGCAAACTGTCCCTACTTTTAGGTATGGGTACATGTaGAACATAGGCCGCAGAACCATCTTCCAACTGAAT +
Preference number: 6 (lower is better)
Translates to: TQTVPTFRYGYM*NIGRRTIFQLN
Trigger: ATTCAGTTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTAGGGACAGTTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396604.5
ENST00000412390.6
ENST00000530463.5
ENST00000532577.5
ENST00000533542.5
CDS GCA 72 bp TTTAGAATTGTGTTGTATGTAAGCAGTAGAACCATCTaGAAGTGTTACTGCTTGCAAGCTTACGCCTTCCAT +
Preference number: 6 (lower is better)
Translates to: FRIVLYVSSRTI*KCYCLQAYAFH
Trigger: ATGGAAGGCGTAAGCTTGCAAGCAGTAACACTTGCAGATGGTTCTACTGCTTACATACAACACAATTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000299606.6
ENST00000396602.7
ENST00000396604.5
ENST00000412390.6
ENST00000414370.5
ENST00000417726.1
ENST00000438144.6
ENST00000496276.5
ENST00000526657.5
ENST00000530463.5
ENST00000531943.5
ENST00000532577.5
ENST00000534265.5
CDS CAA 72 bp CTGGTCATAACTATTACTTTTAGGTATGGGTACATGTaGAACATAGGCCGCAGAACCATCTTCCAACTGAAT +
Preference number: 6 (lower is better)
Translates to: LVITITFRYGYM*NIGRRTIFQLN
Trigger: ATTCAGTTGGAAGATGGTTCTGCGGCCTATGTTCAACATGTACCCATACCTAAAAGTAATAGTTATGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299606.6
CDS TCA 72 bp ATTTCTGATGAGGCAGTATGGAATGCTGCCAAGTCTTaGGCTACAATTGCAACCTTAAGCAAAACAAAACAA +
Preference number: 6 (lower is better)
Translates to: ISDEAVWNAAKS*ATIATLSKTKQ
Trigger: TTGTTTTGTTTTGCTTAAGGTTGCAATTGTAGCTCAAGACTTGGCAGCATTCCATACTGCCTCATCAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532305.1
CDS CAA 90 bp TTCCCTGAGAATCTCGATTTATTTGGGCTAACAACATCTTCTACCTaGAAGAAAAATAAAGACACTTGGGAACAAAGAATGATACATGTG +
Preference number: 6 (lower is better)
Translates to: FPENLDLFGLTTSST*KKNKDTWEQRMIHV
Trigger: CACATGTATCATTCTTTGTTCCCAAGTGTCTTTATTTTTCTTCAAGGTAGAAGATGTTGTTAGCCCAAATAAATCGAGATTCTCAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527597.1