Pregenerated sensors for ZNF10 (Homo sapiens)
Ensembl gene IDs: ENSG00000256223Ensembl transcript IDs: ENST00000248211.11, ENST00000402932.2, ENST00000426665.6, ENST00000536704.1, ENST00000536877.5, ENST00000538918.5, ENST00000540609.5, ENST00000540927.5, ENST00000543271.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCAGCAACAACTCTCCCTATAGTAGCATACTCATTTCTTTTCAAATaGAGGGGTTCTCGCTCAACAACTCACCTATTTAATAATTCCTTC | + |
Preference number: 1 (lower is better) Translates to: SATTLPIVAYSFLFK*RGSRSTTHLFNNSF Trigger: GAAGGAATTATTAAATAGGTGAGTTGTTGAGCGAGAACCCCTTCATTTGAAAAGAAATGAGTATGCTACTATAGGGAGAGTTGTTGCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR GCA 90 bp | ATAAAATCTGTGGTTTCTTTCCCTTCCAGGACCAATTCTCTAATGTaGAATAGGATAGTAACAAGACTGAAAGCATTTCCACATAGATTC | + |
Preference number: 1 (lower is better) Translates to: IKSVVSFPSRTNSLM*NRIVTRLKAFPHRF Trigger: GAATCTATGTGGAAATGCTTTCAGTCTTGTTACTATCCTATTGCACATTAGAGAATTGGTCCTGGAAGGGAAAGAAACCACAGATTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR GCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCGGTATCTTTGGACTGTaGTCTGTTTATCACATGAGG | + |
Preference number: 2 (lower is better) Translates to: FTDEDISKFGTEKLSSMFGIFGL*SVYHMR Trigger: CCTCATGTGATAAACAGAGCACAGTCCAAAGATACC...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR GCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCATTCTCAGGAGCTTTTaGAGTGCTAATAAGAGTGGA | + |
Preference number: 2 (lower is better) Translates to: FTDEDISKFGTEKLSSMFILRSF*SANKSG Trigger: TCCACTCTTATTAGCACTGCAAAAGCTCCTGAGAAT...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR CCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCGAAAGAGGGTATCTTTaGACTGTGCTCTGTTTATCA | + |
Preference number: 2 (lower is better) Translates to: FTDEDISKFGTEKLSSMFERGYL*TVLCLS Trigger: TGATAAACAGAGCACAGTCCAAAGATACCCTCTTTC...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR TCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAATCATTTCTTTTCAAATaGAGGGGTTCTCGCTCAACA | + |
Preference number: 2 (lower is better) Translates to: RIGKLINRWYSKASLMVESFLFK*RGSRST Trigger: TGTTGAGCGAGAACCCCTTCATTTGAAAAGAAATGA...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR GCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGAGACTTGGTCAAGAATaGTCTCAGGCCAATTACTTC | + |
Preference number: 2 (lower is better) Translates to: ENGESWSVPIYNRLIYRMRLGQE*SQANYF Trigger: GAAGTAATTGGCCTGAGAGCATTCTTGACCAAGTCT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR CCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGCTAGCATTTAAGACTTaGTCAAGAATGCTCTCAGGC | + |
Preference number: 2 (lower is better) Translates to: ENGESWSVPIYNRLIYRMLAFKT*SRMLSG Trigger: GCCTGAGAGCATTCTTGACCAAGTCTTAAATGCTAG...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR GCA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACCCAGGAGTTCTCCAATaGAAAATAAAGTCATTGCTC | + |
Preference number: 2 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYPGVLQ*KIKSLL Trigger: GAGCAATGACTTTATTTTGCATTGGAGAACTCCTGG...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR TCA 72 bp | CCAATTCACTTGATCTCAATTGTACAACGACAAGTATaGGCTAGAGGCTGCCATGTTCCTCGTAGTTCTCAA | + |
Preference number: 3 (lower is better) Translates to: PIHLISIVQRQV*ARGCHVPRSSQ Trigger: TTGAGAACTACGAGGAACATGGCAGCCTCTAGCTCATACTTGTCGTTGTACAATTGAGATCAAGTGAATTGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR GCA 72 bp | GTGGTTTCTTTCCCTTCCAGGACCAATTCTCTAATGTaGAATAGGATAGTAACAAGACTGAAAGCATTTCCA | + |
Preference number: 3 (lower is better) Translates to: VVSFPSRTNSLM*NRIVTRLKAFP Trigger: TGGAAATGCTTTCAGTCTTGTTACTATCCTATTGCACATTAGAGAATTGGTCCTGGAAGGGAAAGAAACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR GCA 72 bp | AAAGACTACCTTGAGAAAGAGGGTATCTTTGGACTGTaGTCTGTTTATCACATGAGGACACTTGCTCTAAAT | + |
Preference number: 3 (lower is better) Translates to: KDYLEKEGIFGL*SVYHMRTLALN Trigger: ATTTAGAGCAAGTGTCCTCATGTGATAAACAGAGCACAGTCCAAAGATACCCTCTTTCTCAAGGTAGTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR CAA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGAGAAAGAGGGTATCTTaGGACTGTGCTCTGTTTATC | + |
Preference number: 3 (lower is better) Translates to: ENGESWSVPIYNRLIYRMRKRVS*DCALFI Trigger: GATAAACAGAGCACAGTCCAAAGATACCCTCTTTCT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR TCA 72 bp | ACTCTCCCTATAGTAGCATACTCATTTCTTTTCAAATaGAGGGGTTCTCGCTCAACAACTCACCTATTTAAT | + |
Preference number: 3 (lower is better) Translates to: TLPIVAYSFLFK*RGSRSTTHLFN Trigger: ATTAAATAGGTGAGTTGTTGAGCGAGAACCCCTTCATTTGAAAAGAAATGAGTATGCTACTATAGGGAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR CAA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACCCACATAGATTCAATTaGTACAGCTTATCTCCAGGA | + |
Preference number: 3 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYPHRFN*YSLSPG Trigger: TCCTGGAGATAAGCTGTACAAATTGAATCTATGTGG...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR-3UTR CAA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGCTCTTCCTGAATCTTTaGTGGGTTATTAACTTACCA | + |
Preference number: 3 (lower is better) Translates to: ENGESWSVPIYNRLIYRMLFLNL*WVINLP Trigger: TGGTAAGTTAATAACCCACAAAAGATTCAGGAAGAG...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR CCA 72 bp | GAGCAGCTAATATTTATGCCAGAAAATGGAGAATCATaGTCAGTCCCTATATACAACAGACTGATTTATAGA | + |
Preference number: 3 (lower is better) Translates to: EQLIFMPENGES*SVPIYNRLIYR Trigger: TCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTCTGGCATAAATATTAGCTGCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCGAGCAGCAGGAAACATaGAACCCAGGACCTAGTTCT | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFEQQET*NPGPSS Trigger: AGAACTAGGTCCTGGGTTTCATGTTTCCTGCTGCTC...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAACCACAAATACATCCTTaGAGGTCACCAGTGTCCGGG | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVEPQIHP*RSPVSG Trigger: CCCGGACACTGGTGACCTTCAAGGATGTATTTGTGG...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCGTACAACGACAAGTATaGGCTAGAGGCTGCCATGTT | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFVQRQV*ARGCHV Trigger: AACATGGCAGCCTCTAGCTCATACTTGTCGTTGTAC...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCATGGCACCTACTATGTaGCAGGCACTCTTTTATGTG | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFMAPTM*QALFYV Trigger: CACATAAAAGAGTGCCTGGCACATAGTAGGTGCCAT...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAACGGGGCCAATTCACTTaGTCTCAATTGTACAACGAC | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVERGQFT*SQLYND Trigger: GTCGTTGTACAATTGAGATCAAGTGAATTGGCCCCG...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCCTGTCCCACATTGATTaGATGTTAAGAACTGCTCTC | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFLSHID*MLRTAL Trigger: GAGAGCAGTTCTTAACATGCAATCAATGTGGGACAG...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAACCGGAGGATCACATCTaGCTTAGTAAGCTGATAACC | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVEPEDHI*LSKLIT Trigger: GGTTATCAGCTTACTAAGCCAGATGTGATCCTCCGG...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCCTAGCATTTAAGACTTaGTCAAGAATGCTCTCAGGC | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFLAFKT*SRMLSG Trigger: GCCTGAGAGCATTCTTGACCAAGTCTTAAATGCTAG...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAATTCAAATGCAGTCTCTaGATCAGGATGGGTCTCTTG | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVEFKCSL*IRMGLL Trigger: CAAGAGACCCATCCTGATTCAGAGACTGCATTTGAA...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAATCTCTCAGTACTAGCTaGGCAGGAAGAAGACAGTTT | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVESLSTS*AGRRQF Trigger: AAACTGTCTTCTTCCTGCTCAGCTAGTACTGAGAGA...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGAGCGCTGTCCCACATTaGTTGCATGTTAAGAACTGC | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMSAVPH*LHVKNC Trigger: GCAGTTCTTAACATGCAATCAATGTGGGACAGCGCT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGAATGGGGACCCTCCCTaGTATGTTCAAATGCCCAAT | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMNGDPP*YVQMPN Trigger: ATTGGGCATTTGAACATATCAGGGAGGGTCCCCATT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGACTTACCAGAGAATCTaGAGACTGGGATCCTCTCCA | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMTYQRI*RLGSSP Trigger: TGGAGAGGATCCCAGTCTTCAGATTCTCTGGTAAGT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCTTCATTACTGTTACTTaGACAACTGTCCTGATGACC | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFFITVT*TTVLMT Trigger: GGTCATCAGGACAGTTGTGCAAGTAACAGTAATGAA...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCTGGAAACTGATGATTTaGTTTCAAATGCAGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFWKLMI*FQMQSL Trigger: CAGAGACTGCATTTGAAATCAAATCATCAGTTTCCA...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAAAGAGCCCCAGTTAAGTaGCTATTCTACTCCCTTAAT | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVERAPVK*LFYSLN Trigger: ATTAAGGGAGTAGAATAGTCACTTAACTGGGGCTCT...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAACTGAGGAGACAAAGCTaGAATAAGCAACTAGAAGGT | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVELRRQS*NKQLEG Trigger: ACCTTCTAGTTGCTTATTGCAGCTTTGTCTCCTCAG...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAACCTCAAATGTCTCTCTaGGTTTTCCTGATACTTGTC | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVEPQMSL*VFLILV Trigger: GACAAGTATCAGGAAAACCCAGAGAGACATTTGAGG...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGTTGTTCCCACTAAAATaGGGACCCTCCCTGATATGT | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMLFPLK*GPSLIC Trigger: ACATATCAGGGAGGGTCCCCATTTTAGTGGGAACAA...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAAAGAGAATCTGAAGACTaGGATCCTCTCCATAGAATG | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVERESED*DPLHRM Trigger: CATTCTATGGAGAGGATCCCAGTCTTCAGATTCTCT...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGGTACTTTCTTTTGGGTaGATGCCACTTGCCTCAAAT | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMVLSFG*MPLASN Trigger: ATTTGAGGCAAGTGGCATTCACCCAAAAGAAAGTAC...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGCAGGCTGTTGAGTTCTaGTTTAGGCAAAAGGGAAAA | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMQAVEF*FRQKGK Trigger: TTTTCCCTTTTGCCTAAATCAGAACTCAACAGCCTG...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACAGACTTGGTCAAGAATaGTCTCAGGCCAATTACTTC | + |
Preference number: 4 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYRLGQE*SQANYF Trigger: GAAGTAATTGGCCTGAGAGCATTCTTGACCAAGTCT...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAAATTCTCAGGAGCTTTTaGAGTGCTAATAAGAGTGGA | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVEILRSF*SANKSG Trigger: TCCACTCTTATTAGCACTGCAAAAGCTCCTGAGAAT...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACGGTATCTTTGGACTGTaGTCTGTTTATCACATGAGG | + |
Preference number: 4 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYGIFGL*SVYHMR Trigger: CCTCATGTGATAAACAGAGCACAGTCCAAAGATACC...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCTTGATGAACTATAAATaGAGAGTTCTGGCTGAAGAT | + |
Preference number: 4 (lower is better) Translates to: FTDEDISKFGTEKLSSMFLMNYK*RVLAED Trigger: ATCTTCAGCCAGAACTCTCCATTTATAGTTCATCAA...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR TCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGGATAAAAGACTACCTTaGGAAAGAGGGTATCTTTGG | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMDKRLP*ERGYLW Trigger: CCAAAGATACCCTCTTTCTCAAGGTAGTCTTTTATC...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAAGTTTCTCTCTATGTATaGCCTTTGATATACCAAGAG | + |
Preference number: 4 (lower is better) Translates to: RIGKLINRWYSKASLMVEVSLYV*PLIYQE Trigger: CTCTTGGTATATCAAAGGGCATACATAGAGAGAAAC...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR GCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGCCAGGAGTTCTCCAATaGAAAATAAAGTCATTGCTC | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMPGVLQ*KIKSLL Trigger: GAGCAATGACTTTATTTTGCATTGGAGAACTCCTGG...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACATTTATGCCAGAAAATaGAGAATCATGGTCAGTCCC | + |
Preference number: 4 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYIYARK*RIMVSP Trigger: GGGACTGACCATGATTCTCCATTTTCTGGCATAAAT...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACATCAAGATCTCTGGTTaGCTTCAGCAATACTTCATC | + |
Preference number: 4 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYIKISG*LQQYFI Trigger: GATGAAGTATTGCTGAAGCCAACCAGAGATCTTGAT...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACAGAGATCAAGATCTCTaGTTGGCTTCAGCAATACTT | + |
Preference number: 4 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYRDQDL*LASAIL Trigger: AAGTATTGCTGAAGCCAACCAGAGATCTTGATCTCT...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGTGTGAGTCACGTTTATaGAAATACTCTCTCAGTACT | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMCESRL*KYSLST Trigger: AGTACTGAGAGAGTATTTCCATAAACGTGACTCACA...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGATAAATGGAGAGTTCTaGCTGAAGATAATGCCACAT | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMINGEF*LKIMPH Trigger: ATGTGGCATTATCTTCAGCCAGAACTCTCCATTTAT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGAAGCTCATTAACAGGTaGTACTCAAAAGCTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: ENGESWSVPIYNRLIYRMKLINR*YSKASL Trigger: CAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CCA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACGAAAATGGAGAATCATaGTCAGTCCCTATATACAAC | + |
Preference number: 4 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYENGES*SVPIYN Trigger: GTTGTATATAGGGACTGACCATGATTCTCCATTTTC...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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3UTR CAA 72 bp | TTTGAGGTAGATACTAGTAGTAACCTCATTATACAGTaGAGGAAATTGAGCCACAGGTTATTAGCAATGTTA | + |
Preference number: 4 (lower is better) Translates to: FEVDTSSNLIIQ*RKLSHRLLAML Trigger: TAACATTGCTAATAACCTGTGGCTCAATTTCCTCAACTGTATAATGAGGTTACTACTAGTATCTACCTCAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS TCA 90 bp | CTCCAGGTGCAGCCGTTATTCTCCACAGAACAAGAACGTCCGCCGTaGACGCCGGGGCCGCGCGAGGGACAGAAAGTGACTGAGGCAAGG | + |
Preference number: 5 (lower is better) Translates to: LQVQPLFSTEQERPP*TPGPREGQKVTEAR Trigger: CCTTGCCTCAGTCACTTTCTGTCCCTCGCGCGGCCCCGGCGTTCACGGCGGACGTTCTTGTTCTGTGGAGAATAACGGCTGCACCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000426665.6 ENST00000536704.1 ENST00000538918.5 ENST00000540609.5 ENST00000540927.5 ENST00000543271.5 |
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CDS GCA 90 bp | GTCACCAGTGTCACCACCGCCGCCCACTCTGCGTCAATCTCCAGGTaGAGCCGTTATTCTCCACAGAACAAGAACGTCCGCCGTGAACGC | + |
Preference number: 5 (lower is better) Translates to: VTSVTTAAHSASISR*SRYSPQNKNVRRER Trigger: GCGTTCACGGCGGACGTTCTTGTTCTGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGACACTGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536704.1 |
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CDS GCA 90 bp | AGGAGACAAAGCACCACCGCCGCCCACTCTGCGTCAATCTCCAGGTaGAGCCGTTATTCTCCACAGAACAAGAACGTCCGCCGTGAACGC | + |
Preference number: 5 (lower is better) Translates to: RRQSTTAAHSASISR*SRYSPQNKNVRRER Trigger: GCGTTCACGGCGGACGTTCTTGTTCTGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGCTTTGTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426665.6 ENST00000538918.5 ENST00000543271.5 |
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CDS GCA 90 bp | TTTAATGTTTCCACCACCGCCGCCCACTCTGCGTCAATCTCCAGGTaGAGCCGTTATTCTCCACAGAACAAGAACGTCCGCCGTGAACGC | + |
Preference number: 5 (lower is better) Translates to: FNVSTTAAHSASISR*SRYSPQNKNVRRER Trigger: GCGTTCACGGCGGACGTTCTTGTTCTGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGGAAACATTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540609.5 ENST00000540927.5 |
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CDS TCA 90 bp | GCTGGTCACAGAACGGAAGTCAGAGATAGAAGCCCAAGAAAAATGTaGCGCACCATTACTGGCTTGAAGATGGAATGCAGTGTGAGGAAC | + |
Preference number: 5 (lower is better) Translates to: AGHRTEVRDRSPRKM*RTITGLKMECSVRN Trigger: GTTCCTCACACTGCATTCCATCTTCAAGCCAGTAATGGTGCGTCACATTTTTCTTGGGCTTCTATCTCTGACTTCCGTTCTGTGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000402932.2 |
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CDS GCA 90 bp | CTCCAGGAAGTTTTAGTGTTTCTTACTCTTTGCTCCCACAGCCACTaGAATAAGCAACTAGAAGGTTCGATGGGAGAAAGCGATCCCGTC | + |
Preference number: 5 (lower is better) Translates to: LQEVLVFLTLCSHSH*NKQLEGSMGESDPV Trigger: GACGGGATCGCTTTCTCCCATCGAACCTTCTAGTTGCTTATTGCAGTGGCTGTGGGAGCAAAGAGTAAGAAACACTAAAACTTCCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536877.5 |
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CDS GCA 90 bp | CCTGATGACGATGCAAACACAAAATTCAGCACTTTCGTATATACCTaGAATAAGCAACTAGAAGGTTCGATGGGAGAAAGCGATCCCGTC | + |
Preference number: 5 (lower is better) Translates to: PDDDANTKFSTFVYT*NKQLEGSMGESDPV Trigger: GACGGGATCGCTTTCTCCCATCGAACCTTCTAGTTGCTTATTGCAGGTATATACGAAAGTGCTGAATTTTGTGTTTGCATCGTCATCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426665.6 ENST00000536704.1 ENST00000543271.5 |
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CDS-3UTR CAA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCAGTAAGTACTTTCTTTaGGGTGAATGCCACTTGCCT | + |
Preference number: 5 (lower is better) Translates to: FTDEDISKFGTEKLSSMFSKYFL*GECHLP Trigger: AGGCAAGTGGCATTCACCCAAAAGAAAGTACTTACT...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCTTTCTGATAGGTATGTaGTATGTGGGCATGGTGTGT | + |
Preference number: 5 (lower is better) Translates to: FTDEDISKFGTEKLSSMFFLIGM*YVGMVC Trigger: ACACACCATGCCCACATACAACATACCTATCAGAAA...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACGCATCCATGCCCTCCTaGTTCTTGATGATACTTCCT | + |
Preference number: 5 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYASMPS*FLMILP Trigger: AGGAAGTATCATCAAGAACAAGGAGGGCATGGATGC...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGATCAGGATGGGTCTCTaGGTGAATTTCTCTCTCCAC | + |
Preference number: 5 (lower is better) Translates to: ENGESWSVPIYNRLIYRMIRMGL*VNFSLH Trigger: GTGGAGAGAGAAATTCACCAAGAGACCCATCCTGAT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCATTCATTACTGTTACTaGCACAACTGTCCTGATGAC | + |
Preference number: 5 (lower is better) Translates to: FTDEDISKFGTEKLSSMFIHYCY*HNCPDD Trigger: GTCATCAGGACAGTTGTGCAAGTAACAGTAATGAAT...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | TTTACAGATGAGGATATCAGTAAGTTTGGCACAGAGAAGCTAAGCAGCATGTTCATACAGTTGAGGAAATaGAGCCACAGGTTATTAGCA | + |
Preference number: 5 (lower is better) Translates to: FTDEDISKFGTEKLSSMFIQLRK*SHRLLA Trigger: TGCTAATAACCTGTGGCTCAATTTCCTCAACTGTAT...GAACATGCTGCTTAGCTTCTCTGTGCCAAACTTACTGATATCCTCATCTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | AGAATAGGAAAGCTCATTAACAGGTGGTACTCAAAAGCTTCTTTGATGGTAGAAGATCAAGATCTCTGGTaGGCTTCAGCAATACTTCAT | + |
Preference number: 5 (lower is better) Translates to: RIGKLINRWYSKASLMVEDQDLW*ASAILH Trigger: ATGAAGTATTGCTGAAGCCAACCAGAGATCTTGATC...TTCTACCATCAAAGAAGCTTTTGAGTACCACCTGTTAATGAGCTTTCCTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACAGAAAGAGGGTATCTTaGGACTGTGCTCTGTTTATC | + |
Preference number: 5 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYRKRVS*DCALFI Trigger: GATAAACAGAGCACAGTCCAAAGATACCCTCTTTCT...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGGATTTTCCCAGGCTGTaGAGTTCTGATTTAGGCAAA | + |
Preference number: 5 (lower is better) Translates to: ENGESWSVPIYNRLIYRMDFPRL*SSDLGK Trigger: TTTGCCTAAATCAGAACTCAACAGCCTGGGAAAATC...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GAAAATGGAGAATCATGGTCAGTCCCTATATACAACAGACTGATTTATAGAATGACCTATATCCACTATTaGTCAGTGATTTTCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: ENGESWSVPIYNRLIYRMTYIHY*SVIFPG Trigger: GCCTGGGAAAATCACTGACAAATAGTGGATATAGGT...CATTCTATAAATCAGTCTGTTGTATATAGGGACTGACCATGATTCTCCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACAACCTCATTATACAGTaGAGGAAATTGAGCCACAGG | + |
Preference number: 5 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYNLIIQ*RKLSHR Trigger: CCTGTGGCTCAATTTCCTCAACTGTATAATGAGGTT...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACCTCTATGTATGCCCTTaGATATACCAAGAGATGAAC | + |
Preference number: 5 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYLYVCP*IYQEMN Trigger: GTTCATCTCTTGGTATATCAAAGGGCATACATAGAG...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS-3UTR CAA 90 bp | GCTGTTAACCAAAATATGGTTTCTACCAGACACATAAAACATACCAAACACTACTCCAGTGTGAGCTATTaGATGAACTATAAATGGAGA | + |
Preference number: 5 (lower is better) Translates to: AVNQNMVSTRHIKHTKHYSSVSY*MNYKWR Trigger: TCTCCATTTATAGTTCATCAAATAGCTCACACTGGA...GTAGTGTTTGGTATGTTTTATGTGTCTGGTAGAAACCATATTTTGGTTAACAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000248211.11 |
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CDS TCA 72 bp | CGCCGTGAACGCCGGGGCCGCGCGAGGGACAGAAAGTaGCTGAGGCAAGGGGTGACGATCACCGTTAAATTT | + |
Preference number: 6 (lower is better) Translates to: RRERRGRARDRK*LRQGVTITVKF Trigger: AAATTTAACGGTGATCGTCACCCCTTGCCTCAGTCACTTTCTGTCCCTCGCGCGGCCCCGGCGTTCACGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000426665.6 ENST00000536704.1 ENST00000538918.5 ENST00000540609.5 ENST00000540927.5 ENST00000543271.5 |
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CDS TCA 72 bp | CAGCCGTTATTCTCCACAGAACAAGAACGTCCGCCGTaGACGCCGGGGCCGCGCGAGGGACAGAAAGTGACT | + |
Preference number: 6 (lower is better) Translates to: QPLFSTEQERPP*TPGPREGQKVT Trigger: AGTCACTTTCTGTCCCTCGCGCGGCCCCGGCGTTCACGGCGGACGTTCTTGTTCTGTGGAGAATAACGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000426665.6 ENST00000536704.1 ENST00000538918.5 ENST00000540609.5 ENST00000540927.5 ENST00000543271.5 |
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CDS GCA 72 bp | AGCACCACCGCCGCCCACTCTGCGTCAATCTCCAGGTaGAGCCGTTATTCTCCACAGAACAAGAACGTCCGC | + |
Preference number: 6 (lower is better) Translates to: STTAAHSASISR*SRYSPQNKNVR Trigger: GCGGACGTTCTTGTTCTGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426665.6 ENST00000538918.5 ENST00000543271.5 |
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CDS GCA 72 bp | GTCACCACCGCCGCCCACTCTGCGTCAATCTCCAGGTaGAGCCGTTATTCTCCACAGAACAAGAACGTCCGC | + |
Preference number: 6 (lower is better) Translates to: VTTAAHSASISR*SRYSPQNKNVR Trigger: GCGGACGTTCTTGTTCTGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536704.1 |
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CDS GCA 72 bp | TCCACCACCGCCGCCCACTCTGCGTCAATCTCCAGGTaGAGCCGTTATTCTCCACAGAACAAGAACGTCCGC | + |
Preference number: 6 (lower is better) Translates to: STTAAHSASISR*SRYSPQNKNVR Trigger: GCGGACGTTCTTGTTCTGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540609.5 ENST00000540927.5 |
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CDS GCA 72 bp | AGTGCTGAGGAGACAAAGCACCACCGCCGCCCACTCTaGGTCAATCTCCAGGTGCAGCCGTTATTCTCCACA | + |
Preference number: 6 (lower is better) Translates to: SAEETKHHRRPL*VNLQVQPLFST Trigger: TGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGCTTTGTCTCCTCAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426665.6 ENST00000538918.5 ENST00000543271.5 |
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CDS GCA 72 bp | CTTGAAGGTCACCAGTGTCACCACCGCCGCCCACTCTaGGTCAATCTCCAGGTGCAGCCGTTATTCTCCACA | + |
Preference number: 6 (lower is better) Translates to: LEGHQCHHRRPL*VNLQVQPLFST Trigger: TGTGGAGAATAACGGCTGCACCTGGAGATTGACGCAGAGTGGGCGGCGGTGGTGACACTGGTGACCTTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536704.1 |
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CDS TCA 72 bp | AGAACGGAAGTCAGAGATAGAAGCCCAAGAAAAATGTaGCGCACCATTACTGGCTTGAAGATGGAATGCAGT | + |
Preference number: 6 (lower is better) Translates to: RTEVRDRSPRKM*RTITGLKMECS Trigger: ACTGCATTCCATCTTCAAGCCAGTAATGGTGCGTCACATTTTTCTTGGGCTTCTATCTCTGACTTCCGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000402932.2 |
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CDS GCA 72 bp | GTTTTAGTGTTTCTTACTCTTTGCTCCCACAGCCACTaGAATAAGCAACTAGAAGGTTCGATGGGAGAAAGC | + |
Preference number: 6 (lower is better) Translates to: VLVFLTLCSHSH*NKQLEGSMGES Trigger: GCTTTCTCCCATCGAACCTTCTAGTTGCTTATTGCAGTGGCTGTGGGAGCAAAGAGTAAGAAACACTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536877.5 |
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CDS GCA 72 bp | AATTACCGTCTACCTAGAAATACGAAGCTAATACACTaGTACATTACTAAAGGGCTCAACACGCGCCTGATG | + |
Preference number: 6 (lower is better) Translates to: NYRLPRNTKLIH*YITKGLNTRLM Trigger: CATCAGGCGCGTGTTGAGCCCTTTAGTAATGTAGCAGTGTATTAGCTTCGTATTTCTAGGTAGACGGTAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426665.6 ENST00000536704.1 ENST00000543271.5 |
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CDS CAA 90 bp | GAGACAAAGCTAGGTAGTTACCATTCGCCAGTGCTGTTTACTCGTTaGTGTAGATCCAGATTTCCATTTGGTTTCATTTCCTTTCTCTCT | + |
Preference number: 6 (lower is better) Translates to: ETKLGSYHSPVLFTR*CRSRFPFGFISFLS Trigger: AGAGAGAAAGGAAATGAAACCAAATGGAAATCTGGATCTACACAAACGAGTAAACAGCACTGGCGAATGGTAACTACCTAGCTTTGTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540609.5 ENST00000540927.5 |