RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZMYM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000121741

Ensembl transcript IDs: ENST00000382870.7, ENST00000382871.3, ENST00000382874.6, ENST00000382881.7, ENST00000382883.7, ENST00000468677.5, ENST00000490152.1, ENST00000490422.1, ENST00000494061.6, ENST00000610343.5, ENST00000620447.1

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACATTCCAGCCCATTCCCGTTTCTCCCAAACTACGCGAAGTCCTTaGGAGGAAGGGCTGGGTCTTAATTCTGTGTTCCCAGCACCTGAA +
Preference number: 1 (lower is better)
Translates to: DIPAHSRFSQTTRSP*EEGLGLNSVFPAPE
Trigger: TTCAGGTGCTGGGAACACAGAATTAAGACCCAGCCCTTCCTCTCAAGGACTTCGCGTAGTTTGGGAGAAACGGGAATGGGCTGGAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR CCA 90 bp ATTCCCGTTTCTCCCAAACTACGCGAAGTCCTTGAGAGGAAGGGCTaGGTCTTAATTCTGTGTTCCCAGCACCTGAAATTGTGTGTGGAA +
Preference number: 1 (lower is better)
Translates to: IPVSPKLREVLERKG*VLILCSQHLKLCVE
Trigger: TTCCACACACAATTTCAGGTGCTGGGAACACAGAATTAAGACCCAGCCCTTCCTCTCAAGGACTTCGCGTAGTTTGGGAGAAACGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR GCA 90 bp AGGATGCTATCTATAATCAGAGATCACCTAGAAGCAAAAGGAAATTaGTATCATTTCATTGTCCTTTTCTCAGCAGTCAACTATGACCAC +
Preference number: 1 (lower is better)
Translates to: RMLSIIRDHLEAKGN*YHFIVLFSAVNYDH
Trigger: GTGGTCATAGTTGACTGCTGAGAAAAGGACAATGAAATGATAGCAATTTCCTTTTGCTTCTAGGTGATCTCTGATTATAGATAGCATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTGCCACAGAAAAGGACTaGTGCCATCAACACCGTACC +
Preference number: 2 (lower is better)
Translates to: LCAPSILHNIEVGLLILIATEKD*CHQHRT
Trigger: GGTACGGTGTTGATGGCATCAGTCCTTTTCTGTGGC...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR CAA 90 bp GTAGTAATCCTCTCTATGAAACCTATTCTAGACCATAATGGCCTTTaGGGGTACTTGTGTGTGTCCACAATCATCTCTTTCTATCCTACC +
Preference number: 2 (lower is better)
Translates to: VVILSMKPILDHNGL*GYLCVSTIISFYPT
Trigger: GGTAGGATAGAAAGAGATGATTGTGGACACACACAAGTACCCCAAAAGGCCATTATGGTCTAGAATAGGTTTCATAGAGAGGATTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTGCTAACATTGCAGCATaGTCTGTATCCTTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: LCAPSILHNIEVGLLILIANIAA*SVSLRG
Trigger: CCCTCTTAAGGATACAGATCATGCTGCAATGTTAGC...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR-3UTR GCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTACCAGCGTGGGTACACTaGTACAAAACTCAAAACAGA +
Preference number: 2 (lower is better)
Translates to: HFHDYFEGNKEIILQSILPAWVH*YKTQNR
Trigger: TCTGTTTTGAGTTTTGTAGCAGTGTACCCACGCTGG...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR CAA 90 bp CTCTCTATGAAACCTATTCTAGACCATAATGGCCTTTTGGGGTACTaGTGTGTGTCCACAATCATCTCTTTCTATCCTACCATAAATATT +
Preference number: 2 (lower is better)
Translates to: LSMKPILDHNGLLGY*CVSTIISFYPTINI
Trigger: AATATTTATGGTAGGATAGAAAGAGATGATTGTGGACACACACAAGTACCCCAAAAGGCCATTATGGTCTAGAATAGGTTTCATAGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR-3UTR CCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTCCTCTTGTATTAAGTTaGGCTGAAAGCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: LCAPSILHNIEVGLLILIPLVLS*AESHRK
Trigger: TTTTCTGTGGCTTTCAGCCCAACTTAATACAAGAGG...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR-3UTR CCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACACTAATGCTACCATaGTCATTCAGGAATCAGAAG +
Preference number: 2 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTLMLP*SFRNQK
Trigger: CTTCTGATTCCTGAATGACCATGGTAGCATTAGTGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR TCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAACAGTACACCAATATTaGCAGCATTCTCTTGTCTAT +
Preference number: 2 (lower is better)
Translates to: LRKFLLCAVTFILWERGVTVHQY*QHSLVY
Trigger: ATAGACAAGAGAATGCTGTCAATATTGGTGTACTGT...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACAGTACACCAATATTaGCAGCATTCTCTTGTCTAT +
Preference number: 2 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTVHQY*QHSLVY
Trigger: ATAGACAAGAGAATGCTGTCAATATTGGTGTACTGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATCAGATACTTATGGCTaGCATAGAAGAAAACAGAAT +
Preference number: 2 (lower is better)
Translates to: LRKFLLCAVTFILWERGVSDTYG*HRRKQN
Trigger: ATTCTGTTTTCTTCTATGCCAGCCATAAGTATCTGA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR TCA 72 bp GCCCATTCCCGTTTCTCCCAAACTACGCGAAGTCCTTaGGAGGAAGGGCTGGGTCTTAATTCTGTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: AHSRFSQTTRSP*EEGLGLNSVFP
Trigger: TGGGAACACAGAATTAAGACCCAGCCCTTCCTCTCAAGGACTTCGCGTAGTTTGGGAGAAACGGGAATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR CCA 72 bp TCCAGAATGGGAATAGACTGGTGTAATGGTGAAGTCTaGAACCGCGGTCAGGAGACGGAGCTGTGTCACAAA +
Preference number: 3 (lower is better)
Translates to: SRMGIDWCNGEV*NRGQETELCHK
Trigger: TTTGTGACACAGCTCCGTCTCCTGACCGCGGTTCCAGACTTCACCATTACACCAGTCTATTCCCATTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGCTGTTTTATCCCGATaGCTTCTGCAACGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: RAPFQGSFATVELCNMDVAVLSR*LLQRSF
Trigger: AAAGGAACGTTGCAGAAGCAATCGGGATAAAACAGC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGCTGTTTTATCCCGATaGCTTCTGCAACGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFAVLSR*LLQRSF
Trigger: AAAGGAACGTTGCAGAAGCAATCGGGATAAAACAGC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
3UTR TCA 72 bp ACTTCATTACAAGGCAGGGGATCACAGTCACTTATTTaGGGTGTCCCTCTGACATCTAACTTCCGAGTAAAG +
Preference number: 3 (lower is better)
Translates to: TSLQGRGSQSLI*GVPLTSNFRVK
Trigger: CTTTACTCGGAAGTTAGATGTCAGAGGGACACCTCAAATAAGTGACTGTGATCCCCTGCCTTGTAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGCTGTTTTATCCCGATaGCTTCTGCAACGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSAVLSR*LLQRSF
Trigger: AAAGGAACGTTGCAGAAGCAATCGGGATAAAACAGC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACTACACAGCTAACATaGCAGCATGATCTGTATCCT +
Preference number: 3 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTTQLT*QHDLYP
Trigger: AGGATACAGATCATGCTGCAATGTTAGCTGTGTAGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAACTACACAGCTAACATaGCAGCATGATCTGTATCCT +
Preference number: 3 (lower is better)
Translates to: LRKFLLCAVTFILWERGVTTQLT*QHDLYP
Trigger: AGGATACAGATCATGCTGCAATGTTAGCTGTGTAGT...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTCTGTGGCCCTCTCTTaGGTTCTATTCTTAACATTT +
Preference number: 3 (lower is better)
Translates to: LCAPSILHNIEVGLLILISVALS*VLFLTF
Trigger: AAATGTTAAGAATAGAACCAAAGAGAGGGCCACAGA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTCTGGGAAAAACTTTATaGCTCTTGATGGAATATAGC +
Preference number: 3 (lower is better)
Translates to: LCAPSILHNIEVGLLILILGKTL*LLMEYS
Trigger: GCTATATTCCATCAAGAGCAATAAAGTTTTTCCCAG...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR TCA 72 bp TACTTGATCAGGGTATTTTACTTCAAAATACAAGTGTaGTCATGCTCAATAAGGCCTAAGTGCCCATCTTAT +
Preference number: 3 (lower is better)
Translates to: YLIRVFYFKIQV*SCSIRPKCPSY
Trigger: ATAAGATGGGCACTTAGGCCTTATTGAGCATGATCACACTTGTATTTTGAAGTAAAATACCCTGATCAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTCTTGGTCCCGGTTCTaGCTGGGGCTCCGCGGAACG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFSWSRF*LGLRGT
Trigger: CGTTCCGCGGAGCCCCAGCCAGAACCGGGACCAAGA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382871.3
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTTGGTCCCGGTTCTaGCTGGGGCTCCGCGGAACG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSWSRF*LGLRGT
Trigger: CGTTCCGCGGAGCCCCAGCCAGAACCGGGACCAAGA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382871.3
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTGCACCAGACAGGGCTaGAGGCGATTCTTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFCTRQG*RRFLVP
Trigger: CGGGACCAAGAATCGCCTTCAGCCCTGTCTGGTGCA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382871.3
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAGAAGGGGGTGGTGCTaGACCTGTCATTTTGGTTCG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFRRGWC*TCHFGS
Trigger: CGAACCAAAATGACAGGTTCAGCACCACCCCCTTCT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAGAAGGGGGTGGTGCTaGACCTGTCATTTTGGTTCG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVRRGWC*TCHFGS
Trigger: CGAACCAAAATGACAGGTTCAGCACCACCCCCTTCT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGTACATCAGGCATGCTaGACTGTGTCTCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVVHQAC*TVSLGQ
Trigger: CTGACCCAGAGACACAGTCCAGCATGCCTGATGTAC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGCTGAAGGCGATTCTTaGTCCCGGTTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSAEGDS*SRFWLG
Trigger: CCCCAGCCAGAACCGGGACCAAGAATCGCCTTCAGC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382871.3
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCACTGGTACAGAAGGTaGGGGAGGTTGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVHWYRR*GRLYRF
Trigger: GAACCTGTACAACCTCCCCCACCTTCTGTACCAGTG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTTGATCAGCTACCACTaGTACAGAAGGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLISYH*YRRWGR
Trigger: CCTCCCCCACCTTCTGTACCAGTGGTAGCTGATCAA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTTGATCAGCTACCACTaGTACAGAAGGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFLISYH*YRRWGR
Trigger: CCTCCCCCACCTTCTGTACCAGTGGTAGCTGATCAA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAAAGAGTCCTGCATGTaGTCTCGAACCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVKESCM*SRTSFR
Trigger: CCTGAAGGAGGTTCGAGATCACATGCAGGACTCTTT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAAATGCCTGGCTCCATaGCATGACTGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVKCLAP*HDCSSS
Trigger: TGAAGAGCTGCAGTCATGTCATGGAGCCAGGCATTT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCTGCCCCCTAAGAGCTaGTACCTCTCCCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNLPPKS*YLSLSR
Trigger: TCTGGAAAGGGAGAGGTATCAGCTCTTAGGGGGCAG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCAGGAATCTTCTCACTaGTGTCCAATGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVQESSH*CPMEQA
Trigger: TGCCTGCTCCATTGGACAGCAGTGAGAAGATTCCTG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCATGGTACATCAGGCATaGTGGACTGTGTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFMVHQA*WTVSLG
Trigger: ACCCAGAGACACAGTCCAGCATGCCTGATGTACCAT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTTCCTCCTCACTTTCTaGCAAGGATGCACCAGACAG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVFLLTF*QGCTRQ
Trigger: CTGTCTGGTGCATCCTTGGCAGAAAGTGAGGAGGAA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAGAAGGGGGTGGTGCTaGACCTGTCATTTTGGTTCG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNRRGWC*TCHFGS
Trigger: CGAACCAAAATGACAGGTTCAGCACCACCCCCTTCT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCATGAGACTGGTATCCTaGTACAGCCTTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFMRLVS*YSLSLG
Trigger: GCCAAGAGAAAGGCTGTATCAGGATACCAGTCTCAT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAGCTCAGCTGTGGTGTaGGAGAGTAGATCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSSAVV*ESRSSF
Trigger: AAAAGAGGATCTACTCTCTCACACCACAGCTGAGCT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACATCTTTAGTGCATGGTaGGGGTGCTCTAGCTACCCC +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNIFSAW*GCSSYP
Trigger: GGGGTAGCTAGAGCACCCTCACCATGCACTAAAGAT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTGTGTTCCCAGCACCTaGAATTGTGTGTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVCVPST*NCVWKT
Trigger: AGTCTTCCACACACAATTTCAGGTGCTGGGAACACA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAACTACGCGAAGTCCTTaGGAGGAAGGGCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSTTRSP*EEGLGL
Trigger: AAGACCCAGCCCTTCCTCTCAAGGACTTCGCGTAGT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGCTGGACTGTGTCTCTaGGTCAGAGTTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFAGLCL*VRVLQK
Trigger: CTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGCTGGACTGTGTCTCTaGGTCAGAGTTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVAGLCL*VRVLQK
Trigger: CTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCACTGGTACAGAAGGTaGGGGAGGTTGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNHWYRR*GRLYRF
Trigger: GAACCTGTACAACCTCCCCCACCTTCTGTACCAGTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCTCCTTCAGGAAGCTTaGATGGCTACCTACCTGTTT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFLLQEA*MATYLF
Trigger: AAACAGGTAGGTAGCCATCCAAGCTTCCTGAAGGAG...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTTTTCAGGTCCTTTCTaGGTTGTCATGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFFSGPF*VVMLGS
Trigger: TGAGCCCAACATGACAACTCAGAAAGGACCTGAAAA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGGTGTTTCGGTCCAGTaGAGTAGACGTATACCAGAC +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNGVSVQ*SRRIPD
Trigger: GTCTGGTATACGTCTACTTCACTGGACCGAAACACC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATGCACCAGACAGGGCTaGAGGCGATTCTTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVCTRQG*RRFLVP
Trigger: CGGGACCAAGAATCGCCTTCAGCCCTGTCTGGTGCA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAGCTGGACCACTAAATaGGTTTCCTACATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFSWTTK*VSYIRE
Trigger: CTCACGAATGTAGGAAACTCATTTAGTGGTCCAGCT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAGCTGGACCACTAAATaGGTTTCCTACATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSWTTK*VSYIRE
Trigger: CTCACGAATGTAGGAAACTCATTTAGTGGTCCAGCT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCTTACACTTCCCTTCTaGGATGCCAACTCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLTLPF*DANSFE
Trigger: CTCAAAAGAGTTGGCATCTCAGAAGGGAAGTGTAAG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCTGGAAGGACTCACTTaGATCCACTTGAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLEGLT*IHLSNN
Trigger: ATTGTTGCTCAAGTGGATTCAAGTGAGTCCTTCCAG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACATGGTACATCAGGCATaGTGGACTGTGTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNMVHQA*WTVSLG
Trigger: ACCCAGAGACACAGTCCAGCATGCCTGATGTACCAT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAACTGGTTTAGTAGGCTaGTGTTGGACAGACGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSTGLVG*CWTDGW
Trigger: CCAGCCGTCTGTCCAACAGCAGCCTACTAAACCAGT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCACAACAGTCACACCTTaGAGCCTTGTAGTACCAATC +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFTTVTP*SLVVPI
Trigger: GATTGGTACTACAAGGCTGCAAGGTGTGACTGTTGT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCAATTTGCTAATCTCTaGCCCCTAAGAGCTGATACC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVQFANL*PLRADT
Trigger: GGTATCAGCTCTTAGGGGGCAGAGATTAGCAAATTG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCAGAAAAACAGGAACTaGCACAGGAACAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVQKNRN*HRNRNC
Trigger: ACAGTTCCTGTTCCTGTGCCAGTTCCTGTTTTTCTG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCTCACTGCTGTCCAATaGAGCAGGCAGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNLTAVQ*SRQKNR
Trigger: CCTGTTTTTCTGCCTGCTCCATTGGACAGCAGTGAG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGTACATCAGGCATGCTaGACTGTGTCTCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHVHQAC*TVSLGQ
Trigger: CTGACCCAGAGACACAGTCCAGCATGCCTGATGTAC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCATCTGGAAGTATGCTTaGTTGCCAGCTTCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFIWKYA*LPASQY
Trigger: ATACTGCGAAGCTGGCAACCAAGCATACTTCCAGAT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCACAAGGAAGACACTTaGTATCGAAGACACGCTTTG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVHKEDT*YRRHAL
Trigger: CAAAGCGTGTCTTCGATACCAAGTGTCTTCCTTGTG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAGCTGAAGGCGATTCTTaGTCCCGGTTCTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILAEGDS*SRFWLG
Trigger: CCCCAGCCAGAACCGGGACCAAGAATCGCCTTCAGC...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCACTGGTACAGAAGGTaGGGGAGGTTGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHHWYRR*GRLYRF
Trigger: GAACCTGTACAACCTCCCCCACCTTCTGTACCAGTG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTGCATACTTAGAGCCTaGAATTTAGCCACACAACTG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVCILRA*NLATQL
Trigger: CAGTTGTGTGGCTAAATTTCAGGCTCTAAGTATGCA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACATTTCCCCACGCCACTaGACTCGCTCTTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNISPRH*TRSLRV
Trigger: AACTCTTAAAGAGCGAGTTCAGTGGCGTGGGGAAAT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGGAACAGGAATATTCTaGCTGTACATGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVGTGIF*LYMCIG
Trigger: TCCTATGCACATGTACAGTCAGAATATTCCTGTTCC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCGCCATACGTATATTTaGAAGGAAAGCTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFRHTYI*KESCIL
Trigger: CAGAATGCAGCTTTCCTTTCAAATATACGTATGGCG...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGCCGTCGGATCTCATTaGCAAAATGAGCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNAVGSH*QNELTH
Trigger: ATGGGTTAGCTCATTTTGTCAATGAGATCCGACGGC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAACTCGAGAGAATATTaGCCCATCTGGAAGTATGCT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVNSREY*PIWKYA
Trigger: AGCATACTTCCAGATGGGTCAATATTCTCTCGAGTT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGGTGTTTCGGTCCAGTaGAGTAGACGTATACCAGAC +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSGVSVQ*SRRIPD
Trigger: GTCTGGTATACGTCTACTTCACTGGACCGAAACACC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAAAAGAGTCCTGCATGTaGTCTCGAACCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSKESCM*SRTSFR
Trigger: CCTGAAGGAGGTTCGAGATCACATGCAGGACTCTTT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGCAGAAAGCCACAAATaGGAAAAGGACACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVAESHK*EKDTKV
Trigger: AACCTTAGTGTCCTTTTCTCATTTGTGGCTTTCTGC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTGCACCAGACAGGGCTaGAGGCGATTCTTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILICTRQG*RRFLVN
Trigger: GTTGACCAAGAATCGCCTTCAGCCCTGTCTGGTGCA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCAGAAATTGCTCTACTaGCCATTTCCAACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVQKLLY*PFPTEL
Trigger: TAGCTCTGTTGGAAATGGTCAGTAGAGCAATTTCTG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTGTATTAAGTTGGGCTaGAAGCCACAGAAAAGGACT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVCIKLG*KPQKRT
Trigger: AGTCCTTTTCTGTGGCTTTCAGCCCAACTTAATACA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCCTGGCTCCATGACATaGCTGCAGCTCTTCATAAAC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHPGSMT*LQLFIN
Trigger: GTTTATGAAGAGCTGCAGTCATGTCATGGAGCCAGG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCAGGAATCTTCTCACTaGTGTCCAATGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHQESSH*CPMEQA
Trigger: TGCCTGCTCCATTGGACAGCAGTGAGAAGATTCCTG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATATGGTACATCAGGCATaGTGGACTGTGTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHMVHQA*WTVSLG
Trigger: ACCCAGAGACACAGTCCAGCATGCCTGATGTACCAT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGACCCAGTGTTTCCATaGATTTACGCCATACGTATA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVDPVFP*IYAIRI
Trigger: TATACGTATGGCGTAAATGCATGGAAACACTGGGTC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGGAAGTATGCTTGGTTaGCAGCTTCGCAGTATTTTA +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFGSMLG*QLRSIL
Trigger: TAAAATACTGCGAAGCTGGCAACCAAGCATACTTCC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCCATATTTCTCAGGCTaGATTAAGAAAGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFPYFSG*IKKESC
Trigger: GCAGGACTCTTTCTTAATGCAGCCTGAGAAATATGG...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTTCCATCAGGCATTGTaGCTTGGTATTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVFHQAL*LGIEVK
Trigger: CTTTACCTCAATACCAAGCCACAATGCCTGATGGAA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCTTGGCGCTACAAACTaGCCATTTGGAGATGACTGC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLGATN*PFGDDC
Trigger: GCAGTCATCTCCAAATGGCCAGTTTGTAGCGCCAAG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCTGAACCTGTCATTTTaGTTCGAGATGTCTGACAAC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLNLSF*FEMSDN
Trigger: GTTGTCAGACATCTCGAACCAAAATGACAGGTTCAG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCTCACTGCTGTCCAATaGAGCAGGCAGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLTAVQ*SRQKNR
Trigger: CCTGTTTTTCTGCCTGCTCCATTGGACAGCAGTGAG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACTCACTGCTGTCCAATaGAGCAGGCAGAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLTAVQ*SRQKNR
Trigger: CCTGTTTTTCTGCCTGCTCCATTGGACAGCAGTGAG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCAAATCTGGTTCATATaGTACATCAGGCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVQIWFI*YIRHAG
Trigger: TCCAGCATGCCTGATGTACCATATGAACCAGATTTG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGCTCCTCAGCAGCTCTaGGAAAATCTATTTCGATAT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVAPQQL*ENLFRY
Trigger: ATATCGAAATAGATTTTCCCAGAGCTGCTGAGGAGC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTGTTGGACAGACGGCTaGAAAATCTGTTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFCWTDG*KICLGS
Trigger: ACTTCCTAAACAGATTTTCCAGCCGTCTGTCCAACA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTAGTAGGCTGCTGTTaGACAGACGGCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNLVGCC*TDGWKI
Trigger: GATTTTCCAGCCGTCTGTCCAACAGCAGCCTACTAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGTACTACAGAATTCCTaGAAGGACTCACTTGAATCC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVVLQNS*KDSLES
Trigger: GGATTCAAGTGAGTCCTTCCAGGAATTCTGTAGTAC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTTCAGGAAGCTTGGATaGCTACCTACCTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVFRKLG*LPTCLY
Trigger: ATACAAACAGGTAGGTAGCCATCCAAGCTTCCTGAA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCACAACTAATGGTCTGTaGCCCTCTCTTTGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFTTNGL*PSLWFY
Trigger: ATAGAACCAAAGAGAGGGCCACAGACCATTAGTTGT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTATTGTGGCTTGGTATTaGGGTAAAGAGTTTCGCTTA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVIVAWY*GKEFRL
Trigger: TAAGCGAAACTCTTTACCTCAATACCAAGCCACAAT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAGCTCAGCTGTGGTGTaGGAGAGTAGATCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHSSAVV*ESRSSF
Trigger: AAAAGAGGATCTACTCTCTCACACCACAGCTGAGCT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAGCTGGACCACTAAATaGGTTTCCTACATTCGTGAG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNSWTTK*VSYIRE
Trigger: CTCACGAATGTAGGAAACTCATTTAGTGGTCCAGCT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCACTGACGAGTTCTaGAACTTATTAGATCTAGAC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSTDEF*NLLDLD
Trigger: GTCTAGATCTAATAAGTTTCAGAACTCGTCAGTGGA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAATGTTATGGTTCTTTaGTCAGCTACCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFNVMVL*SATTGT
Trigger: TGTACCAGTGGTAGCTGATCAAAGAACCATAACATT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAGATGCCAACTCTTTTaGGGAAGGAGTAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFRCQLF*GRSNFG
Trigger: TCCAAAATTACTCCTTCCTCAAAAGAGTTGGCATCT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCCTGTTTGTATTCACTaGCACAACTTTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVPVCIH*HNFDSK
Trigger: TTTGCTGTCAAAGTTGTGTCAGTGAATACAAACAGG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGCTAACATTGCAGCATaGTCTGTATCCTTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNANIAA*SVSLRG
Trigger: CCCTCTTAAGGATACAGATCATGCTGCAATGTTAGC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGAAATGTGTTCTAGGTaGAGTGAGTTTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVEMCSR*SEFHRT
Trigger: TGTTCTGTGAAACTCACTTCACCTAGAACACATTTC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACAGTCACTTATTTaGGGTGTCCCTCTGACATCT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNSQSLI*GVPLTS
Trigger: AGATGTCAGAGGGACACCTCAAATAAGTGACTGTGA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCTGAACAAGTTTTGCTaGAGAACTGATGCACTTTGT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLNKFC*RTDALC
Trigger: ACAAAGTGCATCAGTTCTGCAGCAAAACTTGTTCAG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTATAGATGCTGTCAGGTaGATAATTCTCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVIDAVR*IILSIW
Trigger: CCAAATGGAGAGAATTATGCACCTGACAGCATCTAT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCCAGCGTGGGTACACTaGTACAAAACTCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNPAWVH*YKTQNR
Trigger: TCTGTTTTGAGTTTTGTAGCAGTGTACCCACGCTGG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTCTGAGTTGTCATGTTaGGCTCATTTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFSELSC*AHFVDS
Trigger: ACTGTCAACAAAATGAGCCCAACATGACAACTCAGA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCAGAAAAACAGGAACTaGCACAGGAACAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNQKNRN*HRNRNC
Trigger: ACAGTTCCTGTTCCTGTGCCAGTTCCTGTTTTTCTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGCTGGACTGTGTCTCTaGGTCAGAGTTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHAGLCL*VRVLQK
Trigger: CTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACATCTGGAAGTATGCTTaGTTGCCAGCTTCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNIWKYA*LPASQY
Trigger: ATACTGCGAAGCTGGCAACCAAGCATACTTCCAGAT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCACAAGGAAGACACTTaGTATCGAAGACACGCTTTG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNHKEDT*YRRHAL
Trigger: CAAAGCGTGTCTTCGATACCAAGTGTCTTCCTTGTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACATGCCAAAGAACAATaGGGGTGTTTTCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSHAKEQ*GCFPPH
Trigger: GTGAGGAGGAAAACACCCCCATTGTTCTTTGGCATG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATTAGTAGGCTGCTGTTaGACAGACGGCTGGAAAATC +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLVGCC*TDGWKI
Trigger: GATTTTCCAGCCGTCTGTCCAACAGCAGCCTACTAA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCACAAGTGACTTTAACTaGTTTAGTAGGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFTSDFN*FSRLLL
Trigger: CAACAGCAGCCTACTAAACCAGTTAAAGTCACTTGT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTACAAGTGACTTTAACTaGTTTAGTAGGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVTSDFN*FSRLLL
Trigger: CAACAGCAGCCTACTAAACCAGTTAAAGTCACTTGT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTGTAATGGTGAAGTCTaGAACCGCGGTCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILICNGEV*NRGQET
Trigger: CGTCTCCTGACCGCGGTTCCAGACTTCACCATTACA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGCATATTTTGTCTTGTaGCTGTTCATACAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFAYFVL*LFIQAV
Trigger: AACTGCTTGTATGAACAGTCACAAGACAAAATATGC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCTTCTTATAGTCATCTaGACAAGTTTTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFLLIVI*TSFAAE
Trigger: TTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAG...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTTTAAGAGTTCCTTaGGATTTACAACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSLRVP*DLQQSH
Trigger: GTGTGACTGTTGTAAATCTCAAGGAACTCTTAAAGA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTTTTCAGGTCCTTTCTaGGTTGTCATGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHFSGPF*VVMLGS
Trigger: TGAGCCCAACATGACAACTCAGAAAGGACCTGAAAA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCAAGTATCATCTGTCTaGCAAGATTTGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNQVSSV*QDLVCM
Trigger: CATGCAGACCAAATCTTGTCAGACAGATGATACTTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGGAACAGGAATATTCTaGCTGTACATGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNGTGIF*LYMCIG
Trigger: TCCTATGCACATGTACAGTCAGAATATTCCTGTTCC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAACTCGAGAGAATATTaGCCCATCTGGAAGTATGCT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNNSREY*PIWKYA
Trigger: AGCATACTTCCAGATGGGTCAATATTCTCTCGAGTT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTACAGTACACCAATATTaGCAGCATTCTCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVTVHQY*QHSLVY
Trigger: ATAGACAAGAGAATGCTGTCAATATTGGTGTACTGT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTATCATCATCTTCCACTaGCGAGTTCTGAAACTTATT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVIIIFH*RVLKLI
Trigger: AATAAGTTTCAGAACTCGTCAGTGGAAGATGATGAT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACTGGAAGGACTCACTTaGATCCACTTGAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLEGLT*IHLSNN
Trigger: ATTGTTGCTCAAGTGGATTCAAGTGAGTCCTTCCAG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAGAACCTTCTTTACGTaGCTTCAAATGTTCCATGAT +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVRTFFT*LQMFHD
Trigger: ATCATGGAACATTTGAAGTCACGTAAAGAAGGTTCT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382871.3
ENST00000382874.6
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGTTTTGCTGCAGAACTaGTGCACTTTGTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHVLLQN*CTLFSH
Trigger: ATGGGAGAACAAAGTGCATCAGTTCTGCAGCAAAAC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGTTTTGCTGCAGAACTaGTGCACTTTGTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSVLLQN*CTLFSH
Trigger: ATGGGAGAACAAAGTGCATCAGTTCTGCAGCAAAAC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGCTAACATTGCAGCATaGTCTGTATCCTTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSANIAA*SVSLRG
Trigger: CCCTCTTAAGGATACAGATCATGCTGCAATGTTAGC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCCACACAACTGGAATTaGAAAAGTTGTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVPHNWN*KSCTVF
Trigger: GAAAACTGTACAACTTTTGCAATTCCAGTTGTGTGG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGGAAGTATGCTTGGTTaGCAGCTTCGCAGTATTTTA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNGSMLG*QLRSIL
Trigger: TAAAATACTGCGAAGCTGGCAACCAAGCATACTTCC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCCAGCGTGGGTACACTaGTACAAAACTCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHPAWVH*YKTQNR
Trigger: TCTGTTTTGAGTTTTGTAGCAGTGTACCCACGCTGG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCTTCCAAGGAAGCTTTaGAACAGTAGAGTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNLPRKL*NSRVVQ
Trigger: TTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTTCCTCCTCACTTTCTaGCAAGGATGCACCAGACAG +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILIFLLTF*QGCTRQ
Trigger: CTGTCTGGTGCATCCTTGGCAGAAAGTGAGGAGGAA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACTGGTTTAGTAGGCTaGTGTTGGACAGACGGCTGG +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTGLVG*CWTDGW
Trigger: CCAGCCGTCTGTCCAACAGCAGCCTACTAAACCAGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCCATATTTCTCAGGCTaGATTAAGAAAGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNPYFSG*IKKESC
Trigger: GCAGGACTCTTTCTTAATGCAGCCTGAGAAATATGG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCATAAAAGACCTAAGATaGCCAAAAGAGCTACGATTG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFIKDLR*PKELRL
Trigger: CAATCGTAGCTCTTTTGGGCATCTTAGGTCTTTTAT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTCAATAAGGCCTAAGTaGCCATCTTATTCTGACATT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFSIRPK*PSYSDI
Trigger: AATGTCAGAATAAGATGGGCACTTAGGCCTTATTGA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTCCATCAGGCATTGTaGCTTGGTATTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNFHQAL*LGIEVK
Trigger: CTTTACCTCAATACCAAGCCACAATGCCTGATGGAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACAGAAAAACAGGAACTaGCACAGGAACAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSQKNRN*HRNRNC
Trigger: ACAGTTCCTGTTCCTGTGCCAGTTCCTGTTTTTCTG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAGTACATCAGGCATGCTaGACTGTGTCTCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVVHQAC*TVSLGQ
Trigger: CTGACCCAGAGACACAGTCCAGCATGCCTGATGTAC...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCAAATCTGGTTCATATaGTACATCAGGCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNQIWFI*YIRHAG
Trigger: TCCAGCATGCCTGATGTACCATATGAACCAGATTTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACATAATTCTCTCCATTTaGCCGTCGGATCTCATTGAC +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNIILSI*PSDLID
Trigger: GTCAATGAGATCCGACGGCCAAATGGAGAGAATTAT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAATCTGGAAGTATGCTTaGTTGCCAGCTTCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSIWKYA*LPASQY
Trigger: ATACTGCGAAGCTGGCAACCAAGCATACTTCCAGAT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACACAAGGAAGACACTTaGTATCGAAGACACGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSHKEDT*YRRHAL
Trigger: CAAAGCGTGTCTTCGATACCAAGTGTCTTCCTTGTG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTTGAAAAACTGGAAGTaGAGAAATCCACATCATTGG +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLKNWK*RNPHHW
Trigger: CCAATGATGTGGATTTCTCCACTTCCAGTTTTTCAA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTTGAAAAACTGGAAGTaGAGAAATCCACATCATTGG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFLKNWK*RNPHHW
Trigger: CCAATGATGTGGATTTCTCCACTTCCAGTTTTTCAA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAGAATGGGAATAGACTaGTGTAATGGTGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNRMGID*CNGEVW
Trigger: CCAGACTTCACCATTACACCAGTCTATTCCCATTCT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR CAA 72 bp AAACCTATTCTAGACCATAATGGCCTTTTGGGGTACTaGTGTGTGTCCACAATCATCTCTTTCTATCCTACC +
Preference number: 4 (lower is better)
Translates to: KPILDHNGLLGY*CVSTIISFYPT
Trigger: GGTAGGATAGAAAGAGATGATTGTGGACACACACAAGTACCCCAAAAGGCCATTATGGTCTAGAATAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATGCATACTTAGAGCCTaGAATTTAGCCACACAACTG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSCILRA*NLATQL
Trigger: CAGTTGTGTGGCTAAATTTCAGGCTCTAAGTATGCA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAGAGTCTTCTCCTCTTaGCAGTATTCGCAATATGTA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNRVFSS*QYSQYV
Trigger: TACATATTGCGAATACTGTCAAGAGGAGAAGACTCT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACAAGTATCATCTGTCTaGCAAGATTTGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSQVSSV*QDLVCM
Trigger: CATGCAGACCAAATCTTGTCAGACAGATGATACTTG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGGAACAGGAATATTCTaGCTGTACATGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSGTGIF*LYMCIG
Trigger: TCCTATGCACATGTACAGTCAGAATATTCCTGTTCC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCGCCATACGTATATTTaGAAGGAAAGCTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHRHTYI*KESCIL
Trigger: CAGAATGCAGCTTTCCTTTCAAATATACGTATGGCG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACGCCATACGTATATTTaGAAGGAAAGCTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSRHTYI*KESCIL
Trigger: CAGAATGCAGCTTTCCTTTCAAATATACGTATGGCG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTGCCGTCGGATCTCATTaGCAAAATGAGCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILIAVGSH*QNELTH
Trigger: ATGGGTTAGCTCATTTTGTCAATGAGATCCGACGGC...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAACTCGAGAGAATATTaGCCCATCTGGAAGTATGCT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHNSREY*PIWKYA
Trigger: AGCATACTTCCAGATGGGTCAATATTCTCTCGAGTT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAGGTGTTTCGGTCCAGTaGAGTAGACGTATACCAGAC +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILGVSVQ*SRRIPD
Trigger: GTCTGGTATACGTCTACTTCACTGGACCGAAACACC...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAGATGCCAACTCTTTTaGGGAAGGAGTAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNRCQLF*GRSNFG
Trigger: TCCAAAATTACTCCTTCCTCAAAAGAGTTGGCATCT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTCACTTGAATCCACTTaGGCAACAATGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHSLEST*ATMVPF
Trigger: GAAAGGAACCATTGTTGCTCAAGTGGATTCAAGTGA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATCACTTGAATCCACTTaGGCAACAATGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSSLEST*ATMVPF
Trigger: GAAAGGAACCATTGTTGCTCAAGTGGATTCAAGTGA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAAAAGAGTCCTGCATGTaGTCTCGAACCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILKESCM*SRTSFR
Trigger: CCTGAAGGAGGTTCGAGATCACATGCAGGACTCTTT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGCAGAAAGCCACAAATaGGAAAAGGACACTAAGGTT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHAESHK*EKDTKV
Trigger: AACCTTAGTGTCCTTTTCTCATTTGTGGCTTTCTGC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGAAATGTGTTCTAGGTaGAGTGAGTTTCACAGAACA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNEMCSR*SEFHRT
Trigger: TGTTCTGTGAAACTCACTTCACCTAGAACACATTTC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCTCAGCAGTCAACTATaGCCACATAAACTAAGATCC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLSSQL*PHKLRS
Trigger: GGATCTTAGTTTATGTGGTCATAGTTGACTGCTGAG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCATCTGAACAAGTTTTaGTGCAGAACTGATGCACTT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNHLNKF*CRTDAL
Trigger: AAGTGCATCAGTTCTGCAGCAAAACTTGTTCAGATG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAGATCTTCATCAAGTTaGCTAGTTTTGACCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNRSSSS*LVLTQC
Trigger: ACACTGGGTCAAAACTAGGCAACTTGATGAAGATCT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGGCAAAGGTAATAGATaGTGTCAGGTGCATAATTCT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNGKGNR*CQVHNS
Trigger: AGAATTATGCACCTGACAGCATCTATTACCTTTGCC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACTTCCAAGGAAGCTTTaGAACAGTAGAGTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLPRKL*NSRVVQ
Trigger: TTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATTCCTCCTCACTTTCTaGCAAGGATGCACCAGACAG +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILFLLTF*QGCTRQ
Trigger: CTGTCTGGTGCATCCTTGGCAGAAAGTGAGGAGGAA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACCATATTTCTCAGGCTaGATTAAGAAAGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSPYFSG*IKKESC
Trigger: GCAGGACTCTTTCTTAATGCAGCCTGAGAAATATGG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAATCTATCGTTGGATTaGAATCAAGACAAAGACAAG +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFNLSLD*NQDKDK
Trigger: CTTGTCTTTGTCTTGATTGCAATCCAACGATAGATT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACTTGGCGCTACAAACTaGCCATTTGGAGATGACTGC +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVLGATN*PFGDDC
Trigger: GCAGTCATCTCCAAATGGCCAGTTTGTAGCGCCAAG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACAACTGAATATCACTTaGCGCTACAAACTGGCCATT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSQLNIT*RYKLAI
Trigger: AATGGCCAGTTTGTAGCGCCAAGTGATATTCAGTTG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCAACTGAATATCACTTaGCGCTACAAACTGGCCATT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHQLNIT*RYKLAI
Trigger: AATGGCCAGTTTGTAGCGCCAAGTGATATTCAGTTG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAATCCTAAACGTCTaGCAAAATCCTGTTTGTATA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSILNV*QNPVCI
Trigger: TATACAAACAGGATTTTGCCAGACGTTTAGGATTGA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCAAATCTGGTTCATATaGTACATCAGGCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHQIWFI*YIRHAG
Trigger: TCCAGCATGCCTGATGTACCATATGAACCAGATTTG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGCTCCTCAGCAGCTCTaGGAAAATCTATTTCGATAT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSAPQQL*ENLFRY
Trigger: ATATCGAAATAGATTTTCCCAGAGCTGCTGAGGAGC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGCTCCTCAGCAGCTCTaGGAAAATCTATTTCGATAT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHAPQQL*ENLFRY
Trigger: ATATCGAAATAGATTTTCCCAGAGCTGCTGAGGAGC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAATAATTCTCTCCATTTaGCCGTCGGATCTCATTGAC +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSIILSI*PSDLID
Trigger: GTCAATGAGATCCGACGGCCAAATGGAGAGAATTAT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTTTCACAGGACATCTaGAAGGATTGGCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNFSQDI*KDWLCF
Trigger: AAAACACAGCCAATCCTTCCAGATGTCCTGTGAAAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCTGATTAAGATTCTGTaGACTTTTAGACAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLIKIL*TFRQVA
Trigger: TGCTACTTGTCTAAAAGTCCACAGAATCTTAATCAG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATGTTGGACAGACGGCTaGAAAATCTGTTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSCWTDG*KICLGS
Trigger: ACTTCCTAAACAGATTTTCCAGCCGTCTGTCCAACA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTTAAAGCTGACTTCATaGCGAATCTCAGTTAGTTTA +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFLKLTS*RISVSL
Trigger: TAAACTAACTGAGATTCGCCATGAAGTCAGCTTTAA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATTCAGGAAGCTTGGATaGCTACCTACCTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSFRKLG*LPTCLY
Trigger: ATACAAACAGGTAGGTAGCCATCCAAGCTTCCTGAA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTCTCCTTCAGGAAGCTTaGATGGCTACCTACCTGTTT +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILILLQEA*MATYLF
Trigger: AAACAGGTAGGTAGCCATCCAAGCTTCCTGAAGGAG...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTCAGATACTTATGGCTaGCATAGAAGAAAACAGAAT +
Preference number: 4 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFSDTYG*HRRKQN
Trigger: ATTCTGTTTTCTTCTATGCCAGCCATAAGTATCTGA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACACACTAATGCTACCATaGTCATTCAGGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNTLMLP*SFRNQK
Trigger: CTTCTGATTCCTGAATGACCATGGTAGCATTAGTGT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAATTGTGGCTTGGTATTaGGGTAAAGAGTTTCGCTTA +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSIVAWY*GKEFRL
Trigger: TAAGCGAAACTCTTTACCTCAATACCAAGCCACAAT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATATTGTGGCTTGGTATTaGGGTAAAGAGTTTCGCTTA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHIVAWY*GKEFRL
Trigger: TAAGCGAAACTCTTTACCTCAATACCAAGCCACAAT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAAGAGTCTTCTCCTCTTaGCAGTATTCGCAATATGTA +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSRVFSS*QYSQYV
Trigger: TACATATTGCGAATACTGTCAAGAGGAGAAGACTCT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTTTTCAGGTCCTTTCTaGGTTGTCATGTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILIFSGPF*VVMLGS
Trigger: TGAGCCCAACATGACAACTCAGAAAGGACCTGAAAA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAATGAGACTGGTATCCTaGTACAGCCTTTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILMRLVS*YSLSLG
Trigger: GCCAAGAGAAAGGCTGTATCAGGATACCAGTCTCAT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTCAGAACTATCATCATaGGACTGGTATCCTGATACA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHSELSS*DWYPDT
Trigger: TGTATCAGGATACCAGTCTCATGATGATAGTTCTGA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAAGGAAAGCTGCATTCTaGATTGTCAGAACTATCATC +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSRKAAF*IVRTII
Trigger: GATGATAGTTCTGACAATTCAGAATGCAGCTTTCCT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAGGAAAGCTGCATTCTaGATTGTCAGAACTATCATC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHRKAAF*IVRTII
Trigger: GATGATAGTTCTGACAATTCAGAATGCAGCTTTCCT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAAGCTCAGCTGTGGTGTaGGAGAGTAGATCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSSAVV*ESRSSF
Trigger: AAAAGAGGATCTACTCTCTCACACCACAGCTGAGCT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAGCCGTCGGATCTCATTaGCAAAATGAGCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILAVGSH*QNELTH
Trigger: ATGGGTTAGCTCATTTTGTCAATGAGATCCGACGGC...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACACAGTACACCAATATTaGCAGCATTCTCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNTVHQY*QHSLVY
Trigger: ATAGACAAGAGAATGCTGTCAATATTGGTGTACTGT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTCCACTGACGAGTTCTaGAACTTATTAGATCTAGAC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHSTDEF*NLLDLD
Trigger: GTCTAGATCTAATAAGTTTCAGAACTCGTCAGTGGA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACATCATCATCTTCCACTaGCGAGTTCTGAAACTTATT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNIIIFH*RVLKLI
Trigger: AATAAGTTTCAGAACTCGTCAGTGGAAGATGATGAT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAATGTTATGGTTCTTTaGTCAGCTACCACTGGTACA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHNVMVL*SATTGT
Trigger: TGTACCAGTGGTAGCTGATCAAAGAACCATAACATT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCAAAATCTTTTCTGTTaGCCATCAATCACCAGAACA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNQNLFC*PSITRT
Trigger: TGTTCTGGTGATTGATGGTCAACAGAAAAGATTTTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCCTGTTTGTATTCACTaGCACAACTTTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHPVCIH*HNFDSK
Trigger: TTTGCTGTCAAAGTTGTGTCAGTGAATACAAACAGG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACCTGTTTGTATTCACTaGCACAACTTTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSPVCIH*HNFDSK
Trigger: TTTGCTGTCAAAGTTGTGTCAGTGAATACAAACAGG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAGAACCTTCTTTACGTaGCTTCAAATGTTCCATGAT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNRTFFT*LQMFHD
Trigger: ATCATGGAACATTTGAAGTCACGTAAAGAAGGTTCT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382871.3
ENST00000382874.6
CDS-3UTR TCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTCAAAATACAAGTGTaGTCATGCTCAATAAGGCCT +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNFKIQV*SCSIRP
Trigger: AGGCCTTATTGAGCATGATCACACTTGTATTTTGAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCCACACAACTGGAATTaGAAAAGTTGTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNPHNWN*KSCTVF
Trigger: GAAAACTGTACAACTTTTGCAATTCCAGTTGTGTGG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACATCTGAACAAGTTTTaGTGCAGAACTGATGCACTT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSHLNKF*CRTDAL
Trigger: AAGTGCATCAGTTCTGCAGCAAAACTTGTTCAGATG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAATAGATGCTGTCAGGTaGATAATTCTCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSIDAVR*IILSIW
Trigger: CCAAATGGAGAGAATTATGCACCTGACAGCATCTAT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATATAGATGCTGTCAGGTaGATAATTCTCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHIDAVR*IILSIW
Trigger: CCAAATGGAGAGAATTATGCACCTGACAGCATCTAT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGGCAAAGGTAATAGATaGTGTCAGGTGCATAATTCT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHGKGNR*CQVHNS
Trigger: AGAATTATGCACCTGACAGCATCTATTACCTTTGCC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACTGTTTTATCCCGATTaGTTCTGCAACGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLFYPD*FCNVPF
Trigger: AAAAGGAACGTTGCAGAAGCAATCGGGATAAAACAG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCTGTTTTATCCCGATTaGTTCTGCAACGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLFYPD*FCNVPF
Trigger: AAAAGGAACGTTGCAGAAGCAATCGGGATAAAACAG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTACTGAACTTGTGTCCATaGCAAAGAACAATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILLNLCP*QRTMGV
Trigger: CACCCCCATTGTTCTTTGGCATGGACACAAGTTCAG...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610343.5
CDS-3UTR GCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTACAACAGTCACACCTTaGAGCCTTGTAGTACCAATC +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILITTVTP*SLVVPI
Trigger: GATTGGTACTACAAGGCTGCAAGGTGTGACTGTTGT...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACATGCATAGTACAATATaGATCCTCCTCCTACTTCAA +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNMHSTI*ILLLLQ
Trigger: TTGAAGTAGGAGGAGGATGCATATTGTACTATGCAT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTCTGAGTTGTCATGTTaGGCTCATTTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHSELSC*AHFVDS
Trigger: ACTGTCAACAAAATGAGCCCAACATGACAACTCAGA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTCGATATCCAAATCTaGTTCATATGGTACATCAGG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNFDIQI*FIWYIR
Trigger: CCTGATGTACCATATGAACCAGATTTGGATATCGAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATTTTCACAGGACATCTaGAAGGATTGGCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSFSQDI*KDWLCF
Trigger: AAAACACAGCCAATCCTTCCAGATGTCCTGTGAAAA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAACAAGTGACTTTAACTaGTTTAGTAGGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSTSDFN*FSRLLL
Trigger: CAACAGCAGCCTACTAAACCAGTTAAAGTCACTTGT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACTTGAGAGGAAGGGCTaGGTCTTAATTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVLERKG*VLILCS
Trigger: GGAACACAGAATTAAGACCCAGCCCTTCCTCTCAAG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGTTCATACAAGCAGTTaGACAATATGGCTCCATATA +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSVHTSS*TIWLHI
Trigger: TATATGGAGCCATATTGTTCAACTGCTTGTATGAAC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGCATATTTTGTCTTGTaGCTGTTCATACAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSAYFVL*LFIQAV
Trigger: AACTGCTTGTATGAACAGTCACAAGACAAAATATGC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTCTTTAAGAGTTCCTTaGGATTTACAACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHSLRVP*DLQQSH
Trigger: GTGTGACTGTTGTAAATCTCAAGGAACTCTTAAAGA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCGCAGTAAGCAATGTTaGTCACAGAAATGTTTCATT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHRSKQC*SQKCFI
Trigger: AATGAAACATTTCTGTGATCAACATTGCTTACTGCG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACGCAGTAAGCAATGTTaGTCACAGAAATGTTTCATT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSRSKQC*SQKCFI
Trigger: AATGAAACATTTCTGTGATCAACATTGCTTACTGCG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTACTTACACTTCCCTTCTaGGATGCCAACTCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILLTLPF*DANSFE
Trigger: CTCAAAAGAGTTGGCATCTCAGAAGGGAAGTGTAAG...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACTGGAAGGACTCACTTaGATCCACTTGAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVLEGLT*IHLSNN
Trigger: ATTGTTGCTCAAGTGGATTCAAGTGAGTCCTTCCAG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACAAAATCTTTTCTGTTaGCCATCAATCACCAGAACA +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSQNLFC*PSITRT
Trigger: TGTTCTGGTGATTGATGGTCAACAGAAAAGATTTTG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGTTGGTATTCTGCAGTaGTGTTACATGTGTAATCAT +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSVGILQ*CYMCNH
Trigger: ATGATTACACATGTAACATCACTGCAGAATACCAAC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGTTGGTATTCTGCAGTaGTGTTACATGTGTAATCAT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHVGILQ*CYMCNH
Trigger: ATGATTACACATGTAACATCACTGCAGAATACCAAC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCCACACAACTGGAATTaGAAAAGTTGTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHPHNWN*KSCTVF
Trigger: GAAAACTGTACAACTTTTGCAATTCCAGTTGTGTGG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAACAACAGTCACACCTTaGAGCCTTGTAGTACCAATC +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVTTVTP*SLVVPI
Trigger: GATTGGTACTACAAGGCTGCAAGGTGTGACTGTTGT...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAATAGCAAGACAAGGTaGTTGATAGTAGTACTATGG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHNSKTR*LIVVLW
Trigger: CCATAGTACTACTATCAAGCACCTTGTCTTGCTATT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGCAATGGAAGGCTCATaGTGTATACTATTTGTATAC +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHAMEGS*CILFVY
Trigger: GTATACAAATAGTATACAGCATGAGCCTTCCATTGC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTTCCATCAGGCATTGTaGCTTGGTATTGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILIFHQAL*LGIEVK
Trigger: CTTTACCTCAATACCAAGCCACAATGCCTGATGGAA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTTCGATATCCAAATCTaGTTCATATGGTACATCAGG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHFDIQI*FIWYIR
Trigger: CCTGATGTACCATATGAACCAGATTTGGATATCGAA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATTCGATATCCAAATCTaGTTCATATGGTACATCAGG +
Preference number: 4 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSFDIQI*FIWYIR
Trigger: CCTGATGTACCATATGAACCAGATTTGGATATCGAA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTATAATTCTCTCCATTTaGCCGTCGGATCTCATTGAC +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILIIILSI*PSDLID
Trigger: GTCAATGAGATCCGACGGCCAAATGGAGAGAATTAT...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGACATCTGGAAGGATTaGCTGTGTTTTCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHDIWKD*LCFQFV
Trigger: AACAAATTGAAAACACAGCCAATCCTTCCAGATGTC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACACAGATAACCTGTTCTaGACATCAACTTCTAAATTG +
Preference number: 4 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNTDNLF*TSTSKL
Trigger: CAATTTAGAAGTTGATGTCCAGAACAGGTTATCTGT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACCATAATGGCCTTTTaGGGTACTTGTGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTIMAF*GTCVCP
Trigger: TGGACACACACAAGTACCCCAAAAGGCCATTATGGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382874.6
3UTR CAA 72 bp GTCAGGAGACGGAGCTGTGTCACAAAAAGTAGCTTCTaGGTAAATTACTTGATCAGGGTATTTTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: VRRRSCVTKSSF*VNYLIRVFYFK
Trigger: TTTGAAGTAAAATACCCTGATCAAGTAATTTACCAAGAAGCTACTTTTTGTGACACAGCTCCGTCTCCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATGCATACTTAGAGCCTaGAATTTAGCCACACAACTG +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVCILRA*NLATQL
Trigger: CAGTTGTGTGGCTAAATTTCAGGCTCTAAGTATGCA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTCAGAACTATCATCATaGGACTGGTATCCTGATACA +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILISELSS*DWYPDT
Trigger: TGTATCAGGATACCAGTCTCATGATGATAGTTCTGA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATCACTTGAATCCACTTaGGCAACAATGGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSLEST*ATMVPF
Trigger: GAAAGGAACCATTGTTGCTCAAGTGGATTCAAGTGA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTACTATTGCCATCTGCTaGTGTCGATATAGAACTACA +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILITIAIC*CRYRTT
Trigger: TGTAGTTCTATATCGACATCAGCAGATGGCAATAGT...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAGACCCAGTGTTTCCATaGATTTACGCCATACGTATA +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVDPVFP*IYAIRI
Trigger: TATACGTATGGCGTAAATGCATGGAAACACTGGGTC...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAATCTATCGTTGGATTaGAATCAAGACAAAGACAAG +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHNLSLD*NQDKDK
Trigger: CTTGTCTTTGTCTTGATTGCAATCCAACGATAGATT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACTGAACCTGTCATTTTaGTTCGAGATGTCTGACAAC +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVLNLSF*FEMSDN
Trigger: GTTGTCAGACATCTCGAACCAAAATGACAGGTTCAG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCTGATTAAGATTCTGTaGACTTTTAGACAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLIKIL*TFRQVA
Trigger: TGCTACTTGTCTAAAAGTCCACAGAATCTTAATCAG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAGTACTACAGAATTCCTaGAAGGACTCACTTGAATCC +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVVLQNS*KDSLES
Trigger: GGATTCAAGTGAGTCCTTCCAGGAATTCTGTAGTAC...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTTAAAGCTGACTTCATaGCGAATCTCAGTTAGTTTA +
Preference number: 4 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLKLTS*RISVSL
Trigger: TAAACTAACTGAGATTCGCCATGAAGTCAGCTTTAA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACGAGAGCCTTCCATCTaGTTCACTGCTATTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVREPSI*FTAIFQ
Trigger: TTGAAAAATAGCAGTGAACCAGATGGAAGGCTCTCG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTGTTCATACAAGCAGTTaGACAATATGGCTCCATATA +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILIVHTSS*TIWLHI
Trigger: TATATGGAGCCATATTGTTCAACTGCTTGTATGAAC...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTCTTCTTATAGTCATCTaGACAAGTTTTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILILLIVI*TSFAAE
Trigger: TTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAG...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATCAGAACTATCATCATaGGACTGGTATCCTGATACA +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSELSS*DWYPDT
Trigger: TGTATCAGGATACCAGTCTCATGATGATAGTTCTGA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAAGGAAAGCTGCATTCTaGATTGTCAGAACTATCATC +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILRKAAF*IVRTII
Trigger: GATGATAGTTCTGACAATTCAGAATGCAGCTTTCCT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTACAGTACACCAATATTaGCAGCATTCTCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILITVHQY*QHSLVY
Trigger: ATAGACAAGAGAATGCTGTCAATATTGGTGTACTGT...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATCCACTGACGAGTTCTaGAACTTATTAGATCTAGAC +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSTDEF*NLLDLD
Trigger: GTCTAGATCTAATAAGTTTCAGAACTCGTCAGTGGA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTCAAAATCTTTTCTGTTaGCCATCAATCACCAGAACA +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILIQNLFC*PSITRT
Trigger: TGTTCTGGTGATTGATGGTCAACAGAAAAGATTTTG...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR TCA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTAACCTATTTGTTGAATaGATAAATGCCTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LCAPSILHNIEVGLLILINLFVE*INAWLH
Trigger: ATGGAGCCAGGCATTTATTCATTCAACAAATAGGTT...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACTGAACAAGTTTTGCTaGAGAACTGATGCACTTTGT +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVLNKFC*RTDALC
Trigger: ACAAAGTGCATCAGTTCTGCAGCAAAACTTGTTCAG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAAGATCTTCATCAAGTTaGCTAGTTTTGACCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILRSSSS*LVLTQC
Trigger: ACACTGGGTCAAAACTAGGCAACTTGATGAAGATCT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACTGTTTTATCCCGATTaGTTCTGCAACGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVLFYPD*FCNVPF
Trigger: AAAAGGAACGTTGCAGAAGCAATCGGGATAAAACAG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATCTGAGTTGTCATGTTaGGCTCATTTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSELSC*AHFVDS
Trigger: ACTGTCAACAAAATGAGCCCAACATGACAACTCAGA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAGTTCATACAAGCAGTTaGACAATATGGCTCCATATA +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVVHTSS*TIWLHI
Trigger: TATATGGAGCCATATTGTTCAACTGCTTGTATGAAC...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR TCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATCTTTAAGAGTTCCTTaGGATTTACAACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSLRVP*DLQQSH
Trigger: GTGTGACTGTTGTAAATCTCAAGGAACTCTTAAAGA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAAATAGCAAGACAAGGTaGTTGATAGTAGTACTATGG +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILNSKTR*LIVVLW
Trigger: CCATAGTACTACTATCAAGCACCTTGTCTTGCTATT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAGACATCTGGAAGGATTaGCTGTGTTTTCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILDIWKD*LCFQFV
Trigger: AACAAATTGAAAACACAGCCAATCCTTCCAGATGTC...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAGACATCTGGAAGGATTaGCTGTGTTTTCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVDIWKD*LCFQFV
Trigger: AACAAATTGAAAACACAGCCAATCCTTCCAGATGTC...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
3UTR CAA 72 bp TTCACCAGCATAGATTCACATTACAGTACACCAATATaGACAGCATTCTCTTGTCTATTTTTGGTACAGAAG +
Preference number: 4 (lower is better)
Translates to: FTSIDSHYSTPI*TAFSCLFLVQK
Trigger: CTTCTGTACCAAAAATAGACAAGAGAATGCTGTCAATATTGGTGTACTGTAATGTGAATCTATGCTGGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
3UTR CAA 72 bp AATGGAAGGCTCATGCTGTATACTATTTGTATACTATaGCCATCTGCTGATGTCGATATAGAACTACAAATA +
Preference number: 4 (lower is better)
Translates to: NGRLMLYTICIL*PSADVDIELQI
Trigger: TATTTGTAGTTCTATATCGACATCAGCAGATGGCAATAGTATACAAATAGTATACAGCATGAGCCTTCCATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR GCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATCTGAATGGATAAATTaGTATGCAGAAGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVSEWIN*YAEAQS
Trigger: ACTTTGTGCTTCTGCATAGCAATTTATCCATTCAGA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR GCA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATCTGAATGGATAAATTaGTATGCAGAAGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSEWIN*YAEAQS
Trigger: ACTTTGTGCTTCTGCATAGCAATTTATCCATTCAGA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CCA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATCAATCCTAAACGTCTaGCAAAATCCTGTTTGTATA +
Preference number: 4 (lower is better)
Translates to: LRKFLLCAVTFILWERGVSILNV*QNPVCI
Trigger: TATACAAACAGGATTTTGCCAGACGTTTAGGATTGA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS GCA 90 bp GGTTTGAACTGCAGGGGTCCACTTGGACACGTATGTTTTTCTGTGTaGCTGCCTCTCCAACCTCCTTCTACCTCTTCCAATCGTGCCACC +
Preference number: 5 (lower is better)
Translates to: GLNCRGPLGHVCFSV*LPLQPPSTSSNRAT
Trigger: GGTGGCACGATTGGAAGAGGTAGAAGGAGGTTGGAGAGGCAGGCACACAGAAAAACATACGTGTCCAAGTGGACCCCTGCAGTTCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494061.6
CDS TCA 90 bp ACATTCCTGCTTACCTCAGGCTGCATTAAGAAAGAGTCCTGCATGTaGTCTCGAACCTCCTTCAGGAAGCTTGGATGGCTACCTACCTGT +
Preference number: 5 (lower is better)
Translates to: TFLLTSGCIKKESCM*SRTSFRKLGWLPTC
Trigger: ACAGGTAGGTAGCCATCCAAGCTTCCTGAAGGAGGTTCGAGATCACATGCAGGACTCTTTCTTAATGCAGCCTGAGGTAAGCAGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382881.7
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCCTCCTTCAGGAAGCTaGGATGGCTACCTACCTGTT +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVPPSGS*DGYLPV
Trigger: AACAGGTAGGTAGCCATCCAAGCTTCCTGAAGGAGG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCCTCCTTCAGGAAGCTaGGATGGCTACCTACCTGTT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFPPSGS*DGYLPV
Trigger: AACAGGTAGGTAGCCATCCAAGCTTCCTGAAGGAGG...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCATCTGGAAGTATGCTaGGTTGCCAGCTTCGCAGTA +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVHLEVC*VASFAV
Trigger: TACTGCGAAGCTGGCAACCAAGCATACTTCCAGATG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTTGCCCCAGGCCCCATaGAGGGTGTTATGTAATCTA +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVLPQAP*RVLCNL
Trigger: TAGATTACATAACACCCTCAATGGGGCCTGGGGCAA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS GCA 90 bp AAACCTTGCTTTTTAGCTCCTCAATTGCTGCAGGAATCTTCTCACTaGTGTCCAATGGAGCAGGCAGAAAAACAGGAACTGGCACAGGAA +
Preference number: 5 (lower is better)
Translates to: KPCFLAPQLLQESSH*CPMEQAEKQELAQE
Trigger: TTCCTGTGCCAGTTCCTGTTTTTCTGCCTGCTCCATTGGACAGCAGTGAGAAGATTCCTGCAGCAATTGAGGAGCTAAAAAGCAAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAGAAGGTGGGGGAGGTaGTACAGGTTCGATAAAAAC +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVRRWGR*YRFDKN
Trigger: GTTTTTATCGAACCTGTACAACCTCCCCCACCTTCT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTCCTGGAAGGACTCACTaGAATCCACTTGAGCAACAA +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVPGRTH*NPLEQQ
Trigger: TTGTTGCTCAAGTGGATTCAAGTGAGTCCTTCCAGG...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAACTACGCGAAGTCCTaGAGAGGAAGGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHNYAKS*RGRAGS
Trigger: AGACCCAGCCCTTCCTCTCAAGGACTTCGCGTAGTT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS TCA 90 bp TGTCCATGCCAAAGAACACTAGTAAGTCCAGAGATGGTATCCAGGTaGCTACGGCAGAGAGTAATATACACATGTATGGAATGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CPCQRTLVSPEMVSR*LRQRVIYTCMEWGC
Trigger: ACACCCCCATTCCATACATGTGTATATTACTCTCTGCCGTAGTCACCTGGATACCATCTCTGGACTTACTAGTGTTCTTTGGCATGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620447.1
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGTTTTCCATCAGGCATaGTGGCTTGGTATTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFVFHQA*WLGIEV
Trigger: TACCTCAATACCAAGCCACAATGCCTGATGGAAAAC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAACTGAATATCACTaGGCGCTACAAACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSTEYH*ALQTGH
Trigger: ATGGCCAGTTTGTAGCGCCAAGTGATATTCAGTTGA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCATGTTGGGCTCATTTaGTTGACAGTAGAAACGCAG +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFHVGLI*LTVETQ
Trigger: CTGCGTTTCTACTGTCAACAAAATGAGCCCAACATG...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTGGAAGTATGCTTGGTaGCCAGCTTCGCAGTATTTT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFWKYAW*PASQYF
Trigger: AAAATACTGCGAAGCTGGCAACCAAGCATACTTCCA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCACACAAGGAAGACACTaGGTATCGAAGACACGCTTT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFTQGRH*VSKTRF
Trigger: AAAGCGTGTCTTCGATACCAAGTGTCTTCCTTGTGT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTACAACAGTCACACCTaGCAGCCTTGTAGTACCAAT +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVYNSHT*QPCSTN
Trigger: ATTGGTACTACAAGGCTGCAAGGTGTGACTGTTGTA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTACAACAGTCACACCTaGCAGCCTTGTAGTACCAAT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFYNSHT*QPCSTN
Trigger: ATTGGTACTACAAGGCTGCAAGGTGTGACTGTTGTA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTATCACAGTCACTTATTaGAGGTGTCCCTCTGACATC +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVITVTY*RCPSDI
Trigger: GATGTCAGAGGGACACCTCAAATAAGTGACTGTGAT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGACCATAATGGCCTTTaGGGGTACTTGTGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNDHNGL*GYLCVS
Trigger: GGACACACACAAGTACCCCAAAAGGCCATTATGGTC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS CCA 90 bp AGCAGCTCTGGGAAAATCTATTTCGATATCCAAATCTGGTTCATATaGTACATCAGGCATGCTGGACTGTGTCTCTGGGTCAGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: SSSGKIYFDIQIWFI*YIRHAGLCLWVRVL
Trigger: AAGAACTCTGACCCAGAGACACAGTCCAGCATGCCTGATGTACCATATGAACCAGATTTGGATATCGAAATAGATTTTCCCAGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTTTTTAGCTCCTCAATaGCTGCAGGAATCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFFLAPQ*LQESSH
Trigger: GTGAGAAGATTCCTGCAGCAATTGAGGAGCTAAAAA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTATTACACTGTTGATGTaGGTTGTCTCTGTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVITLLM*VVSVFP
Trigger: GGGGAAAACAGAGACAACCAACATCAACAGTGTAAT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAAGATCTTCATCAAGTaGCCTAGTTTTGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVKIFIK*PSFDPV
Trigger: CACTGGGTCAAAACTAGGCAACTTGATGAAGATCTT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTCTTGCCCTTGATTaGTTTCCATGTCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVSLALD*FPCPLH
Trigger: ATGAAGAGGACATGGAAACAAATCAAGGGCAAGAGA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTTAGTAGGCTGCTGTaGGACAGACGGCTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNFSRLL*DRRLEN
Trigger: ATTTTCCAGCCGTCTGTCCAACAGCAGCCTACTAAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCCTGGAAGGACTCACTaGAATCCACTTGAGCAACAA +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNPGRTH*NPLEQQ
Trigger: TTGTTGCTCAAGTGGATTCAAGTGAGTCCTTCCAGG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTGGCTACCTACCTGTTaGTATTCACTGACACAACTT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFWLPTC*YSLTQL
Trigger: AAGTTGTGTCAGTGAATACAAACAGGTAGGTAGCCA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCACTACACAGCTAACATaGCAGCATGATCTGTATCCT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFTTQLT*QHDLYP
Trigger: AGGATACAGATCATGCTGCAATGTTAGCTGTGTAGT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGGCCTTTTGGGGTACTaGTGTGTGTCCACAATCATC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSGLLGY*CVSTII
Trigger: GATGATTGTGGACACACACAAGTACCCCAAAAGGCC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS GCA 90 bp TACTTCCACACAAATACTCCTGTATTCCAAGGCAAAGGTAATAGATaGTGTCAGGTGCATAATTCTCTCCATTTGGCCGTCGGATCTCAT +
Preference number: 5 (lower is better)
Translates to: YFHTNTPVFQGKGNR*CQVHNSLHLAVGSH
Trigger: ATGAGATCCGACGGCCAAATGGAGAGAATTATGCACCTGACAGCATCTATTACCTTTGCCTTGGAATACAGGAGTATTTGTGTGGAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS CCA 90 bp CTATTTCGATATCCAAATCTGGTTCATATGGTACATCAGGCATGCTaGACTGTGTCTCTGGGTCAGAGTTCTTCAAAAGGTCTGAACCAA +
Preference number: 5 (lower is better)
Translates to: LFRYPNLVHMVHQAC*TVSLGQSSSKGLNQ
Trigger: TTGGTTCAGACCTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGCATGCCTGATGTACCATATGAACCAGATTTGGATATCGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGGCAACCAGTACAAGTaGTCAGTTTTCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVGNQYK*SVFHIS
Trigger: AGAAATATGGAAAACTGACAACTTGTACTGGTTGCC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCAAGAGTCTTCTCCTCTaGACAGTATTCGCAATATGT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFKSLLL*TVFAIC
Trigger: ACATATTGCGAATACTGTCAAGAGGAGAAGACTCTT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCATGTTGGGCTCATTTaGTTGACAGTAGAAACGCAG +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNHVGLI*LTVETQ
Trigger: CTGCGTTTCTACTGTCAACAAAATGAGCCCAACATG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCAGGTCCTTTCTGAGTaGTCATGTTGGGCTCATTTT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNQVLSE*SCWAHF
Trigger: AAAATGAGCCCAACATGACAACTCAGAAAGGACCTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTGGAAGTATGCTTGGTaGCCAGCTTCGCAGTATTTT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNWKYAW*PASQYF
Trigger: AAAATACTGCGAAGCTGGCAACCAAGCATACTTCCA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCAACTCGAGAGAATATaGACCCATCTGGAAGTATGC +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNQLERI*THLEVC
Trigger: GCATACTTCCAGATGGGTCAATATTCTCTCGAGTTG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTATCGAAGACACGCTTaGTTTTCCATCGTTAAAGGA +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFYRRHA*FSIVKG
Trigger: TCCTTTAACGATGGAAAACAAAGCGTGTCTTCGATA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACACACAAGGAAGACACTaGGTATCGAAGACACGCTTT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNTQGRH*VSKTRF
Trigger: AAAGCGTGTCTTCGATACCAAGTGTCTTCCTTGTGT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGGCTGTGTTTTCAATTaGTTCAAATACTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFGCVFN*FKYWLI
Trigger: GATGAGCCAGTATTTGAACAAATTGAAAACACAGCC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGCTGTTTTATCCCGATaGCTTCTGCAACGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNAVLSR*LLQRSF
Trigger: AAAGGAACGTTGCAGAAGCAATCGGGATAAAACAGC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAGAAGGTGGGGGAGGTaGTACAGGTTCGATAAAAAC +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHRRWGR*YRFDKN
Trigger: GTTTTTATCGAACCTGTACAACCTCCCCCACCTTCT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAAGAAGGTGGGGGAGGTaGTACAGGTTCGATAAAAAC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSRRWGR*YRFDKN
Trigger: GTTTTTATCGAACCTGTACAACCTCCCCCACCTTCT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAAATGTTATGGTTCTTaGATCAGCTACCACTGGTAC +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVKCYGS*ISYHWY
Trigger: GTACCAGTGGTAGCTGATCAAAGAACCATAACATTT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTTTAGTAGGCTGCTGTaGGACAGACGGCTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHFSRLL*DRRLEN
Trigger: ATTTTCCAGCCGTCTGTCCAACAGCAGCCTACTAAA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGCAAAATCTTTTCTGTaGACCATCAATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFAKSFL*TINHQN
Trigger: GTTCTGGTGATTGATGGTCAACAGAAAAGATTTTGC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTAAACCTCTACAATGTTaGCAAGAATTTGTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVKPLQC*QEFVCS
Trigger: GGAGCACACAAATTCTTGCAAACATTGTAGAGGTTT...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS TCA 90 bp TCATTACTTTATACAAGCCATCTCTCAACAAAGGCAAATTACAATTaGCCCTTGAGCAACATGGGTTTGAACTGCAGGGGTCCACTTGGA +
Preference number: 5 (lower is better)
Translates to: SLLYTSHLSTKANYN*PLSNMGLNCRGPLG
Trigger: TCCAAGTGGACCCCTGCAGTTCAAACCCATGTTGCTCAAGGGTCAATTGTAATTTGCCTTTGTTGAGAGATGGCTTGTATAAAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494061.6
CDS GCA 90 bp AATCTATTTCGATATCCAAATCTGGTTCATATGGTACATCAGGCATaGTGGACTGTGTCTCTGGGTCAGAGTTCTTCAAAAGGTCTGAAC +
Preference number: 5 (lower is better)
Translates to: NLFRYPNLVHMVHQA*WTVSLGQSSSKGLN
Trigger: GTTCAGACCTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGCATGCCTGATGTACCATATGAACCAGATTTGGATATCGAAATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGTTTTCCATCAGGCATaGTGGCTTGGTATTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSVFHQA*WLGIEV
Trigger: TACCTCAATACCAAGCCACAATGCCTGATGGAAAAC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCCTCTTTAAGAGTTCCTaGAGATTTACAACAGTCACA +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFLFKSS*RFTTVT
Trigger: TGTGACTGTTGTAAATCTCAAGGAACTCTTAAAGAG...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACATGTTGGGCTCATTTaGTTGACAGTAGAAACGCAG +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSHVGLI*LTVETQ
Trigger: CTGCGTTTCTACTGTCAACAAAATGAGCCCAACATG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTGTTCTTCATCTCTTaGTTAGGTGTTGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNLFFIS*LGVGEG
Trigger: CCCTTCTCCAACACCTAACAAAGAGATGAAGAACAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTCAAGTTGCCTAGTTTaGACCCAGTGTTTCCATGCA +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHSSCLV*TQCFHA
Trigger: TGCATGGAAACACTGGGTCAAAACTAGGCAACTTGA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTGGAAGTATGCTTGGTaGCCAGCTTCGCAGTATTTT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHWKYAW*PASQYF
Trigger: AAAATACTGCGAAGCTGGCAACCAAGCATACTTCCA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTCATCTGGAAGTATGCTaGGTTGCCAGCTTCGCAGTA +
Preference number: 5 (lower is better)
Translates to: LCAPSILHNIEVGLLILIHLEVC*VASFAV
Trigger: TACTGCGAAGCTGGCAACCAAGCATACTTCCAGATG...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACAACTCGAGAGAATATaGACCCATCTGGAAGTATGC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSQLERI*THLEVC
Trigger: GCATACTTCCAGATGGGTCAATATTCTCTCGAGTTG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCTACAGTACACCAATATaGACAGCATTCTCTTGTCTA +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFYSTPI*TAFSCL
Trigger: TAGACAAGAGAATGCTGTCAATATTGGTGTACTGTA...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTGAGGAAGGAGTAATTTaGGAATCATTTCCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVEEGVI*ESFPCS
Trigger: ACTACAAGGAAATGATTCCAAAATTACTCCTTCCTC...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGAGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTTCACTGACACAACTTaGACAGCAAAATCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: RAPFQGSFATVELCNMDVFTDTT*TAKSFL
Trigger: CAGAAAAGATTTTGCTGTCAAAGTTGTGTCAGTGAA...AACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTGGCTACCTACCTGTTaGTATTCACTGACACAACTT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNWLPTC*YSLTQL
Trigger: AAGTTGTGTCAGTGAATACAAACAGGTAGGTAGCCA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTACAACAGTCACACCTaGCAGCCTTGTAGTACCAAT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHYNSHT*QPCSTN
Trigger: ATTGGTACTACAAGGCTGCAAGGTGTGACTGTTGTA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACACTACACAGCTAACATaGCAGCATGATCTGTATCCT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNTTQLT*QHDLYP
Trigger: AGGATACAGATCATGCTGCAATGTTAGCTGTGTAGT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAAGCAAGACAAGGTGCTaGATAGTAGTACTATGGCAG +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSSKTRC*IVVLWQ
Trigger: CTGCCATAGTACTACTATCAAGCACCTTGTCTTGCT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCATTGCTATCATTTCATaGTCCTTTTCTCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFIAIIS*SFSQQS
Trigger: TGACTGCTGAGAAAAGGACAATGAAATGATAGCAAT...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGGACAGCACTGTAGGTaGTTTCTATTCTCAGAACTG +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSGQHCR*FLFSEL
Trigger: CAGTTCTGAGAATAGAAACAACCTACAGTGCTGTCC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp AGCCCCCTTCCAAGGAAGCTTTGCAACAGTAGAGTTGTGCAATATGGATGTTTCGTAATGGCTCTAGAATaGCCATTTGTATTTATGCCT +
Preference number: 5 (lower is better)
Translates to: SPLPRKLCNSRVVQYGCFVMALE*PFVFMP
Trigger: AGGCATAAATACAAATGGCAATTCTAGAGCCATTAC...GAAACATCCATATTGCACAACTCTACTGTTGCAAAGCTTCCTTGGAAGGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS GCA 90 bp AATCTTAAGCAAATTTCTCCTGTATTCCAAGGCAAAGGTAATAGATaGTGTCAGGTGCATAATTCTCTCCATTTGGCCGTCGGATCTCAT +
Preference number: 5 (lower is better)
Translates to: NLKQISPVFQGKGNR*CQVHNSLHLAVGSH
Trigger: ATGAGATCCGACGGCCAAATGGAGAGAATTATGCACCTGACAGCATCTATTACCTTTGCCTTGGAATACAGGAGAAATTTGCTTAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490152.1
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGGCAACCAGTACAAGTaGTCAGTTTTCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNGNQYK*SVFHIS
Trigger: AGAAATATGGAAAACTGACAACTTGTACTGGTTGCC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACTACAAACTGGCCATTaGGAGATGACTGCATACTTA +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLQTGH*EMTAYL
Trigger: TAAGTATGCAGTCATCTCCAAATGGCCAGTTTGTAG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCTACAAACTGGCCATTaGGAGATGACTGCATACTTA +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLQTGH*EMTAYL
Trigger: TAAGTATGCAGTCATCTCCAAATGGCCAGTTTGTAG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACAAGAGTCTTCTCCTCTaGACAGTATTCGCAATATGT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNKSLLL*TVFAIC
Trigger: ACATATTGCGAATACTGTCAAGAGGAGAAGACTCTT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTTGTTCTTCATCTCTTaGTTAGGTGTTGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLFFIS*LGVGEG
Trigger: CCCTTCTCCAACACCTAACAAAGAGATGAAGAACAA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATTTTTAGCTCCTCAATaGCTGCAGGAATCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSFLAPQ*LQESSH
Trigger: GTGAGAAGATTCCTGCAGCAATTGAGGAGCTAAAAA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATATTACACTGTTGATGTaGGTTGTCTCTGTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHITLLM*VVSVFP
Trigger: GGGGAAAACAGAGACAACCAACATCAACAGTGTAAT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAATTACACTGTTGATGTaGGTTGTCTCTGTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSITLLM*VVSVFP
Trigger: GGGGAAAACAGAGACAACCAACATCAACAGTGTAAT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAAAGATCTTCATCAAGTaGCCTAGTTTTGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSKIFIK*PSFDPV
Trigger: CACTGGGTCAAAACTAGGCAACTTGATGAAGATCTT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAAGATCTTCATCAAGTaGCCTAGTTTTGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHKIFIK*PSFDPV
Trigger: CACTGGGTCAAAACTAGGCAACTTGATGAAGATCTT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACATCTGGAAGTATGCTaGGTTGCCAGCTTCGCAGTA +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVHLEVC*VASFAV
Trigger: TACTGCGAAGCTGGCAACCAAGCATACTTCCAGATG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATCTCTTGCCCTTGATTaGTTTCCATGTCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSSLALD*FPCPLH
Trigger: ATGAAGAGGACATGGAAACAAATCAAGGGCAAGAGA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTTTAGTAGGCTGCTGTaGGACAGACGGCTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: LCAPSILHNIEVGLLILIFSRLL*DRRLEN
Trigger: ATTTTCCAGCCGTCTGTCCAACAGCAGCCTACTAAA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACGCAAAATCTTTTCTGTaGACCATCAATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNAKSFL*TINHQN
Trigger: GTTCTGGTGATTGATGGTCAACAGAAAAGATTTTGC...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTGGCTACCTACCTGTTaGTATTCACTGACACAACTT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHWLPTC*YSLTQL
Trigger: AAGTTGTGTCAGTGAATACAAACAGGTAGGTAGCCA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCTGTGGCCCTCTCTTaGGTTCTATTCTTAACATTT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNSVALS*VLFLTF
Trigger: AAATGTTAAGAATAGAACCAAAGAGAGGGCCACAGA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS TCA 90 bp AGGCATGCTGGACTGTGTCTCTGGGTCAGAGTTCTTCAAAAGGTCTaGACCAATTATATCTGTTTCAATAATTACACTGTTGATGTTGGT +
Preference number: 5 (lower is better)
Translates to: RHAGLCLWVRVLQKV*TNYICFNNYTVDVG
Trigger: ACCAACATCAACAGTGTAATTATTGAAACAGATATAATTGGTTCAGACCTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGCATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGGCAACCAGTACAAGTaGTCAGTTTTCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHGNQYK*SVFHIS
Trigger: AGAAATATGGAAAACTGACAACTTGTACTGGTTGCC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGCCACACAACTGGAATaGCAAAAGTTGTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHATQLE*QKLYSF
Trigger: AAAACTGTACAACTTTTGCAATTCCAGTTGTGTGGC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTCAACTGAATATCACTaGGCGCTACAAACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: LCAPSILHNIEVGLLILISTEYH*ALQTGH
Trigger: ATGGCCAGTTTGTAGCGCCAAGTGATATTCAGTTGA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCTGGCAAAATCCTGTTaGTATAATAATTTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNLAKSC*YNNLQP
Trigger: AGGCTGCAAATTATTATACAAACAGGATTTTGCCAG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCTCTTTAAGAGTTCCTaGAGATTTACAACAGTCACA +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNLFKSS*RFTTVT
Trigger: TGTGACTGTTGTAAATCTCAAGGAACTCTTAAAGAG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTCAGGTCCTTTCTGAGTaGTCATGTTGGGCTCATTTT +
Preference number: 5 (lower is better)
Translates to: LCAPSILHNIEVGLLILIQVLSE*SCWAHF
Trigger: AAAATGAGCCCAACATGACAACTCAGAAAGGACCTG...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAACGCCATACGTATATTaGAAAGGAAAGCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSTPYVY*KGKLHS
Trigger: AGAATGCAGCTTTCCTTTCAAATATACGTATGGCGT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATATCGAAGACACGCTTaGTTTTCCATCGTTAAAGGA +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSYRRHA*FSIVKG
Trigger: TCCTTTAACGATGGAAAACAAAGCGTGTCTTCGATA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGGCTGTGTTTTCAATTaGTTCAAATACTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSGCVFN*FKYWLI
Trigger: GATGAGCCAGTATTTGAACAAATTGAAAACACAGCC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATAAATGTTATGGTTCTTaGATCAGCTACCACTGGTAC +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHKCYGS*ISYHWY
Trigger: GTACCAGTGGTAGCTGATCAAAGAACCATAACATTT...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAGCAAAATCTTTTCTGTaGACCATCAATCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSAKSFL*TINHQN
Trigger: GTTCTGGTGATTGATGGTCAACAGAAAAGATTTTGC...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTTCACTGACACAACTTaGACAGCAAAATCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNFTDTT*TAKSFL
Trigger: CAGAAAAGATTTTGCTGTCAAAGTTGTGTCAGTGAA...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTAGCAAGACAAGGTGCTaGATAGTAGTACTATGGCAG +
Preference number: 5 (lower is better)
Translates to: LCAPSILHNIEVGLLILISKTRC*IVVLWQ
Trigger: CTGCCATAGTACTACTATCAAGCACCTTGTCTTGCT...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACACTATTTGTATACTATaGCCATCTGCTGATGTCGAT +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNTICIL*PSADVD
Trigger: ATCGACATCAGCAGATGGCAATAGTATACAAATAGT...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp CACTCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACCATGCTGTATACTATTaGTATACTATTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: HSQIIYMVIPSVGTLLQNHAVYY*YTIAIC
Trigger: GCAGATGGCAATAGTATACAAATAGTATACAGCATG...GTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS GCA 90 bp CAAATTAGTAATGCTATAAAATATTCGGGACAACTGCCACTATGTTaGAAGTTTGCAAGACAGAAAAATCAGCTCCCACTAGGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: QISNAIKYSGQLPLC*KFARQKNQLPLGVC
Trigger: ACAGACACCTAGTGGGAGCTGATTTTTCTGTCTTGCAAACTTGCAACATAGTGGCAGTTGTCCCGAATATTTTATAGCATTACTAATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS CCA 90 bp CCTGATCATAATGTAAGTTTTCAGGTCCTTTCTGAGTTGTCATGTTaGGCTCATTTTGTTGACAGTAGAAACGCAGTAAGCAATGTTGAT +
Preference number: 5 (lower is better)
Translates to: PDHNVSFQVLSELSC*AHFVDSRNAVSNVD
Trigger: ATCAACATTGCTTACTGCGTTTCTACTGTCAACAAAATGAGCCCAACATGACAACTCAGAAAGGACCTGAAAACTTACATTATGATCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATGTTCATACAAGCAGTaGAACAATATGGCTCCATAT +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSCSYKQ*NNMAPY
Trigger: ATATGGAGCCATATTGTTCAACTGCTTGTATGAACA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATCAACTGAATATCACTaGGCGCTACAAACTGGCCAT +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVSTEYH*ALQTGH
Trigger: ATGGCCAGTTTGTAGCGCCAAGTGATATTCAGTTGA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATCTGGCAAAATCCTGTTaGTATAATAATTTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHLAKSC*YNNLQP
Trigger: AGGCTGCAAATTATTATACAAACAGGATTTTGCCAG...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACTCTTTAAGAGTTCCTaGAGATTTACAACAGTCACA +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLFKSS*RFTTVT
Trigger: TGTGACTGTTGTAAATCTCAAGGAACTCTTAAAGAG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTACAGGTCCTTTCTGAGTaGTCATGTTGGGCTCATTTT +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILQVLSE*SCWAHF
Trigger: AAAATGAGCCCAACATGACAACTCAGAAAGGACCTG...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATCAAGTTGCCTAGTTTaGACCCAGTGTTTCCATGCA +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVSSCLV*TQCFHA
Trigger: TGCATGGAAACACTGGGTCAAAACTAGGCAACTTGA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATCAAGTTGCCTAGTTTaGACCCAGTGTTTCCATGCA +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILSSCLV*TQCFHA
Trigger: TGCATGGAAACACTGGGTCAAAACTAGGCAACTTGA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTACAACTCGAGAGAATATaGACCCATCTGGAAGTATGC +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVQLERI*THLEVC
Trigger: GCATACTTCCAGATGGGTCAATATTCTCTCGAGTTG...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACACAAGGAAGACACTaGGTATCGAAGACACGCTTT +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTQGRH*VSKTRF
Trigger: AAAGCGTGTCTTCGATACCAAGTGTCTTCCTTGTGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCATACAGTACACCAATATaGACAGCATTCTCTTGTCTA +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSYSTPI*TAFSCL
Trigger: TAGACAAGAGAATGCTGTCAATATTGGTGTACTGTA...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATGAGGAAGGAGTAATTTaGGAATCATTTCCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHEEGVI*ESFPCS
Trigger: ACTACAAGGAAATGATTCCAAAATTACTCCTTCCTC...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CCGAAAGACACTGCAAGTTCTAAACTTTTAGTAGTGCTACCCATACACAACCATTTCACTGACACAACTTaGACAGCAAAATCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PKDTASSKLLVVLPIHNHFTDTT*TAKSFL
Trigger: CAGAAAAGATTTTGCTGTCAAAGTTGTGTCAGTGAA...ATGGTTGTGTATGGGTAGCACTACTAAAAGTTTAGAACTTGCAGTGTCTTTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCACTGGGAAAAACTTTATaGCTCTTGATGGAATATAGC +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSLGKTL*LLMEYS
Trigger: GCTATATTCCATCAAGAGCAATAAAGTTTTTCCCAG...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TCACAGATTATTTACATGGTAATACCCAGCGTGGGTACACTGCTACAAAACTCAACTTTCATGACTATTTaGAGGGGAACAAGGAGATTA +
Preference number: 5 (lower is better)
Translates to: SQIIYMVIPSVGTLLQNSTFMTI*RGTRRL
Trigger: TAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGT...TGAGTTTTGTAGCAGTGTACCCACGCTGGGTATTACCATGTAAATAATCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS TCA 90 bp GGTTCGATAAAAACAACATCATCATCATCTTCCACTGACGAGTTCTaGAACTTATTAGATCTAGACACTAAAGGATTAGCTGGACCACTA +
Preference number: 5 (lower is better)
Translates to: GSIKTTSSSSSTDEF*NLLDLDTKGLAGPL
Trigger: TAGTGGTCCAGCTAATCCTTTAGTGTCTAGATCTAATAAGTTTCAGAACTCGTCAGTGGAAGATGATGATGATGTTGTTTTTATCGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000382881.7
ENST00000610343.5
ENST00000620447.1
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATTGTTCTTCATCTCTTaGTTAGGTGTTGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVLFFIS*LGVGEG
Trigger: CCCTTCTCCAACACCTAACAAAGAGATGAAGAACAA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTATTTTTAGCTCCTCAATaGCTGCAGGAATCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILFLAPQ*LQESSH
Trigger: GTGAGAAGATTCCTGCAGCAATTGAGGAGCTAAAAA...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTACGCCATACGTATATTaGAAAGGAAAGCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: LCAPSILHNIEVGLLILITPYVY*KGKLHS
Trigger: AGAATGCAGCTTTCCTTTCAAATATACGTATGGCGT...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS TCA 90 bp CAAACTATTAACTATGCAACAACTGCTAAGGTCCAAACAAAGCAATaGTCATCAGCTAAGTCGCCTTCAAAAACAGAATGTTTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QTINYATTAKVQTKQ*SSAKSPSKTECFSL
Trigger: GAGAGAAAAACATTCTGTTTTTGAAGGCGACTTAGCTGATGATCATTGCTTTGTTTGGACCTTAGCAGTTGTTGCATAGTTAATAGTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS GCA 90 bp TTAGAAGATTTTAACTCATCTAATACCAGAAGATCTTCATCAAGTTaGCTAGTTTTGACCCAGTGTTTCCATGCATTTACGCCATACGTA +
Preference number: 5 (lower is better)
Translates to: LEDFNSSNTRRSSSS*LVLTQCFHAFTPYV
Trigger: TACGTATGGCGTAAATGCATGGAAACACTGGGTCAAAACTAGGCAACTTGATGAAGATCTTCTGGTATTAGATGAGTTAAAATCTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAGCCACACAACTGGAATaGCAAAAGTTGTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILATQLE*QKLYSF
Trigger: AAAACTGTACAACTTTTGCAATTCCAGTTGTGTGGC...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAGCCACACAACTGGAATaGCAAAAGTTGTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVATQLE*QKLYSF
Trigger: AAAACTGTACAACTTTTGCAATTCCAGTTGTGTGGC...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAAAGAGTCTTCTCCTCTaGACAGTATTCGCAATATGT +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILKSLLL*TVFAIC
Trigger: ACATATTGCGAATACTGTCAAGAGGAGAAGACTCTT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACGCCATACGTATATTaGAAAGGAAAGCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTPYVY*KGKLHS
Trigger: AGAATGCAGCTTTCCTTTCAAATATACGTATGGCGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATATCGAAGACACGCTTaGTTTTCCATCGTTAAAGGA +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVYRRHA*FSIVKG
Trigger: TCCTTTAACGATGGAAAACAAAGCGTGTCTTCGATA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGTGTGCTCCATCCATCCTACATAACATAGAAGTTGGATTACTCATCTTGATTTACAGTACACCAATATaGACAGCATTCTCTTGTCTA +
Preference number: 5 (lower is better)
Translates to: LCAPSILHNIEVGLLILIYSTPI*TAFSCL
Trigger: TAGACAAGAGAATGCTGTCAATATTGGTGTACTGTA...AATCAAGATGAGTAATCCAACTTCTATGTTATGTAGGATGGATGGAGCACACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAAATGTTTGCAAGAATTaGTGTGCTCCATCCATCCTA +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVNVCKN*CAPSIL
Trigger: TAGGATGGATGGAGCACACAAATTCTTGCAAACATT...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382874.6
CDS CCA 90 bp GGTTGCCAGCTTCGCAGTATTTTATTCAATTCTTGCTCAAATGTTTaGTATCCAGGATCAATAAATATGTTGTCTTTTCGATTACTTCCA +
Preference number: 5 (lower is better)
Translates to: GCQLRSILFNSCSNV*YPGSINMLSFRLLP
Trigger: TGGAAGTAATCGAAAAGACAACATATTTATTGATCCTGGATACCAAACATTTGAGCAAGAATTGAATAAAATACTGCGAAGCTGGCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTATGTTCATACAAGCAGTaGAACAATATGGCTCCATAT +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVCSYKQ*NNMAPY
Trigger: ATATGGAGCCATATTGTTCAACTGCTTGTATGAACA...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAGAGGAAGGAGTAATTTaGGAATCATTTCCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILEEGVI*ESFPCS
Trigger: ACTACAAGGAAATGATTCCAAAATTACTCCTTCCTC...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTACTGGGAAAAACTTTATaGCTCTTGATGGAATATAGC +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILLGKTL*LLMEYS
Trigger: GCTATATTCCATCAAGAGCAATAAAGTTTTTCCCAG...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp TTGAGAAAATTTCTTTTGTGTGCTGTAACATTTATCCTATGGGAGAGAGGAGTAATTGCTATCATTTCATaGTCCTTTTCTCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LRKFLLCAVTFILWERGVIAIIS*SFSQQS
Trigger: TGACTGCTGAGAAAAGGACAATGAAATGATAGCAAT...TACTCCTCTCTCCCATAGGATAAATGTTACAGCACACAAAAGAAATTTTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS-3UTR CAA 90 bp CACTTTCATGACTATTTTGAGGGGAACAAGGAGATTATCCTACAGTCAATATTAACTTTCATGACTATTTaGAGGGGAACAAGGAGATTA +
Preference number: 5 (lower is better)
Translates to: HFHDYFEGNKEIILQSILTFMTI*RGTRRL
Trigger: TAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGT...TAATATTGACTGTAGGATAATCTCCTTGTTCCCCTCAAAATAGTCATGAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382874.6
ENST00000610343.5
CDS GCA 72 bp TGCAGGGGTCCACTTGGACACGTATGTTTTTCTGTGTaGCTGCCTCTCCAACCTCCTTCTACCTCTTCCAAT +
Preference number: 6 (lower is better)
Translates to: CRGPLGHVCFSV*LPLQPPSTSSN
Trigger: ATTGGAAGAGGTAGAAGGAGGTTGGAGAGGCAGGCACACAGAAAAACATACGTGTCCAAGTGGACCCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494061.6
CDS CCA 72 bp CTCAATTGCTGCAGGAATCTTCTCACTGCTGTCCAATaGAGCAGGCAGAAAAACAGGAACTGGCACAGGAAC +
Preference number: 6 (lower is better)
Translates to: LNCCRNLLTAVQ*SRQKNRNWHRN
Trigger: GTTCCTGTGCCAGTTCCTGTTTTTCTGCCTGCTCCATTGGACAGCAGTGAGAAGATTCCTGCAGCAATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS TCA 72 bp CTTACCTCAGGCTGCATTAAGAAAGAGTCCTGCATGTaGTCTCGAACCTCCTTCAGGAAGCTTGGATGGCTA +
Preference number: 6 (lower is better)
Translates to: LTSGCIKKESCM*SRTSFRKLGWL
Trigger: TAGCCATCCAAGCTTCCTGAAGGAGGTTCGAGATCACATGCAGGACTCTTTCTTAATGCAGCCTGAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382881.7
CDS CCA 72 bp GTCCTGCATGTGATCTCGAACCTCCTTCAGGAAGCTTaGATGGCTACCTACCTGTTTGTATTCACTGACACA +
Preference number: 6 (lower is better)
Translates to: VLHVISNLLQEA*MATYLFVFTDT
Trigger: TGTGTCAGTGAATACAAACAGGTAGGTAGCCATCCAAGCTTCCTGAAGGAGGTTCGAGATCACATGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000382881.7
ENST00000610343.5
CDS CAA 90 bp CTGTATCAAGAGCATCTGAAGAAACCTTGCTTTTTAGCTCCTCAATaGCTGCAGGAATCTTCTCACTGCTGTCCAATGGAGCAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: LYQEHLKKPCFLAPQ*LQESSHCCPMEQAE
Trigger: TTCTGCCTGCTCCATTGGACAGCAGTGAGAAGATTCCTGCAGCAATTGAGGAGCTAAAAAGCAAGGTTTCTTCAGATGCTCTTGATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS TCA 72 bp CCGTACAAGCATATTTTCCAAGGTGTTTCGGTCCAGTaGAGTAGACGTATACCAGACAGGGCTATCTGTAGA +
Preference number: 6 (lower is better)
Translates to: PYKHIFQGVSVQ*SRRIPDRAICR
Trigger: TCTACAGATAGCCCTGTCTGGTATACGTCTACTTCACTGGACCGAAACACCTTGGAAAATATGCTTGTACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000490422.1
ENST00000610343.5
CDS CCA 72 bp AACAGGAATATTCTGACTGTACATGTGCATAGGAACTaGGATATACACAGGCACAGGGATAGGCACTGGAAC +
Preference number: 6 (lower is better)
Translates to: NRNILTVHVHRN*DIHRHRDRHWN
Trigger: GTTCCAGTGCCTATCCCTGTGCCTGTGTATATCCCAGTTCCTATGCACATGTACAGTCAGAATATTCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CAA 90 bp ATGTTTCATTTCCCCACGCCACTGAACTCGCTCTTTAAGAGTTCCTaGAGATTTACAACAGTCACACCTTGCAGCCTTGTAGTACCAATC +
Preference number: 6 (lower is better)
Translates to: MFHFPTPLNSLFKSS*RFTTVTPCSLVVPI
Trigger: GATTGGTACTACAAGGCTGCAAGGTGTGACTGTTGTAAATCTCAAGGAACTCTTAAAGAGCGAGTTCAGTGGCGTGGGGAAATGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS GCA 72 bp CGATATCCAAATCTGGTTCATATGGTACATCAGGCATaGTGGACTGTGTCTCTGGGTCAGAGTTCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: RYPNLVHMVHQA*WTVSLGQSSSK
Trigger: TTTTGAAGAACTCTGACCCAGAGACACAGTCCAGCATGCCTGATGTACCATATGAACCAGATTTGGATATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CCA 72 bp TATCCAAATCTGGTTCATATGGTACATCAGGCATGCTaGACTGTGTCTCTGGGTCAGAGTTCTTCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: YPNLVHMVHQAC*TVSLGQSSSKG
Trigger: ACCTTTTGAAGAACTCTGACCCAGAGACACAGTCCAGCATGCCTGATGTACCATATGAACCAGATTTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CAA 90 bp TCCGTCATTGTAAGCAACTCTGTATCAAGAGCATCTGAAGAAACCTaGCTTTTTAGCTCCTCAATTGCTGCAGGAATCTTCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: SVIVSNSVSRASEET*LFSSSIAAGIFSLL
Trigger: CAGCAGTGAGAAGATTCCTGCAGCAATTGAGGAGCTAAAAAGCAAGGTTTCTTCAGATGCTCTTGATACAGAGTTGCTTACAATGACGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS TCA 72 bp GGAAAGCTGCATTCTGAATTGTCAGAACTATCATCATaGGACTGGTATCCTGATACAGCCTTTCTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: GKLHSELSELSS*DWYPDTAFLLA
Trigger: AGCCAAGAGAAAGGCTGTATCAGGATACCAGTCTCATGATGATAGTTCTGACAATTCAGAATGCAGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS GCA 72 bp ACAAATACTCCTGTATTCCAAGGCAAAGGTAATAGATaGTGTCAGGTGCATAATTCTCTCCATTTGGCCGTC +
Preference number: 6 (lower is better)
Translates to: TNTPVFQGKGNR*CQVHNSLHLAV
Trigger: GACGGCCAAATGGAGAGAATTATGCACCTGACAGCATCTATTACCTTTGCCTTGGAATACAGGAGTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS GCA 72 bp CAAATTTCTCCTGTATTCCAAGGCAAAGGTAATAGATaGTGTCAGGTGCATAATTCTCTCCATTTGGCCGTC +
Preference number: 6 (lower is better)
Translates to: QISPVFQGKGNR*CQVHNSLHLAV
Trigger: GACGGCCAAATGGAGAGAATTATGCACCTGACAGCATCTATTACCTTTGCCTTGGAATACAGGAGAAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490152.1
CDS TCA 72 bp AAGGCTAGCCTTCAAGTGCAAGTTGTTTTGATCCTCTaGGTGGTTGCAGAACTCTGTCATAGTCAAGTTAAA +
Preference number: 6 (lower is better)
Translates to: KASLQVQVVLIL*VVAELCHSQVK
Trigger: TTTAACTTGACTATGACAGAGTTCTGCAACCACTCAGAGGATCAAAACAACTTGCACTTGAAGGCTAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS TCA 72 bp CAAAGAACACTAGTAAGTCCAGAGATGGTATCCAGGTaGCTACGGCAGAGAGTAATATACACATGTATGGAA +
Preference number: 6 (lower is better)
Translates to: QRTLVSPEMVSR*LRQRVIYTCME
Trigger: TTCCATACATGTGTATATTACTCTCTGCCGTAGTCACCTGGATACCATCTCTGGACTTACTAGTGTTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620447.1
CDS CAA 90 bp TCTGACAACCCTGATCATAATGTAAGTTTTCAGGTCCTTTCTGAGTaGTCATGTTGGGCTCATTTTGTTGACAGTAGAAACGCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: SDNPDHNVSFQVLSE*SCWAHFVDSRNAVS
Trigger: GCTTACTGCGTTTCTACTGTCAACAAAATGAGCCCAACATGACAACTCAGAAAGGACCTGAAAACTTACATTATGATCAGGGTTGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CAA 90 bp AGTTGCATTTCAACTGAATATCACTTGGCGCTACAAACTGGCCATTaGGAGATGACTGCATACTTAGAGCCTGGAATAAAGCAGAATTGT +
Preference number: 6 (lower is better)
Translates to: SCISTEYHLALQTGH*EMTAYLEPGIKQNC
Trigger: ACAATTCTGCTTTATTCCAGGCTCTAAGTATGCAGTCATCTCCAAATGGCCAGTTTGTAGCGCCAAGTGATATTCAGTTGAAATGCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382870.7
CDS TCA 72 bp CCAAAGAACCTTCTTTACGTGACTTCAAATGTTCCATaGTTAAGACCTCATCTAACAATGGGGGTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: PKNLLYVTSNVP*LRPHLTMGVFS
Trigger: GGAAAACACCCCCATTGTTAGATGAGGTCTTAATCATGGAACATTTGAAGTCACGTAAAGAAGGTTCTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382871.3
ENST00000382874.6
CDS GCA 72 bp AATGCAACTTCTTATAGTCATCTGAACAAGTTTTGCTaGAGAACTGATGCACTTTGTTTTGCCTCCCATTCC +
Preference number: 6 (lower is better)
Translates to: NATSYSHLNKFC*RTDALCFASHS
Trigger: GGAATGGGAGGCAAAACAAAGTGCATCAGTTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAGTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS GCA 72 bp TGCAATGCAACTTCTTATAGTCATCTGAACAAGTTTTaGTGCAGAACTGATGCACTTTGTTTTGCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: CNATSYSHLNKF*CRTDALCFASH
Trigger: ATGGGAGGCAAAACAAAGTGCATCAGTTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAGTTGCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS GCA 72 bp AATGCAACTTCTTATAGTCATCTGAACAAGTTTTGCTaGAGAACTGATGCACTTTGTTCTCCCATTCCAGGA +
Preference number: 6 (lower is better)
Translates to: NATSYSHLNKFC*RTDALCSPIPG
Trigger: TCCTGGAATGGGAGAACAAAGTGCATCAGTTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAGTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS GCA 72 bp TGCAATGCAACTTCTTATAGTCATCTGAACAAGTTTTaGTGCAGAACTGATGCACTTTGTTCTCCCATTCCA +
Preference number: 6 (lower is better)
Translates to: CNATSYSHLNKF*CRTDALCSPIP
Trigger: TGGAATGGGAGAACAAAGTGCATCAGTTCTGCAGCAAAACTTGTTCAGATGACTATAAGAAGTTGCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000610343.5
CDS CCA 72 bp AATGTAAGTTTTCAGGTCCTTTCTGAGTTGTCATGTTaGGCTCATTTTGTTGACAGTAGAAACGCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: NVSFQVLSELSC*AHFVDSRNAVS
Trigger: GCTTACTGCGTTTCTACTGTCAACAAAATGAGCCCAACATGACAACTCAGAAAGGACCTGAAAACTTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CAA 72 bp TGGAATTGCAAAAGTTGTACAGTTTTCCATCAGGCATaGTGGCTTGGTATTGAGGTAAAGAGTTTCGCTTAC +
Preference number: 6 (lower is better)
Translates to: WNCKSCTVFHQA*WLGIEVKSFAY
Trigger: GTAAGCGAAACTCTTTACCTCAATACCAAGCCACAATGCCTGATGGAAAACTGTACAACTTTTGCAATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000468677.5
ENST00000610343.5
CDS CAA 72 bp CAACTCGAGAGAATATTGACCCATCTGGAAGTATGCTaGGTTGCCAGCTTCGCAGTATTTTATTCAATTCTT +
Preference number: 6 (lower is better)
Translates to: QLERILTHLEVC*VASFAVFYSIL
Trigger: AAGAATTGAATAAAATACTGCGAAGCTGGCAACCAAGCATACTTCCAGATGGGTCAATATTCTCTCGAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS TCA 72 bp AACTATGCAACAACTGCTAAGGTCCAAACAAAGCAATaGTCATCAGCTAAGTCGCCTTCAAAAACAGAATGT +
Preference number: 6 (lower is better)
Translates to: NYATTAKVQTKQ*SSAKSPSKTEC
Trigger: ACATTCTGTTTTTGAAGGCGACTTAGCTGATGATCATTGCTTTGTTTGGACCTTAGCAGTTGTTGCATAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS TCA 72 bp CCCAGTGTTTCCATGCATTTACGCCATACGTATATTTaGAAGGAAAGCTGCATTCTGAATTGTCAGAACTAT +
Preference number: 6 (lower is better)
Translates to: PSVSMHLRHTYI*KESCILNCQNY
Trigger: ATAGTTCTGACAATTCAGAATGCAGCTTTCCTTTCAAATATACGTATGGCGTAAATGCATGGAAACACTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS GCA 72 bp TTCATCAAGTTGCCTAGTTTTGACCCAGTGTTTCCATaGATTTACGCCATACGTATATTTGAAAGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: FIKLPSFDPVFP*IYAIRIFERKA
Trigger: AGCTTTCCTTTCAAATATACGTATGGCGTAAATGCATGGAAACACTGGGTCAAAACTAGGCAACTTGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS CAA 72 bp GCTTTTGTCATTGTTAAAGGTTTGCAAAGAACTGCTTaGTTCTTCATCTCTTTGTTAGGTGTTGGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: AFVIVKGLQRTA*FFISLLGVGEG
Trigger: CCCTTCTCCAACACCTAACAAAGAGATGAAGAACAAAGCAGTTCTTTGCAAACCTTTAACAATGACAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CAA 72 bp ACCCAGTGTTTCCATGCATTTACGCCATACGTATATTaGAAAGGAAAGCTGCATTCTGAATTGTCAGAACTA +
Preference number: 6 (lower is better)
Translates to: TQCFHAFTPYVY*KGKLHSELSEL
Trigger: TAGTTCTGACAATTCAGAATGCAGCTTTCCTTTCAAATATACGTATGGCGTAAATGCATGGAAACACTGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS TCA 72 bp TTGTACAGTTTTCCATCAGGCATTGTGGCTTGGTATTaGGGTAAAGAGTTTCGCTTACAAAAATGGCAAATA +
Preference number: 6 (lower is better)
Translates to: LYSFPSGIVAWY*GKEFRLQKWQI
Trigger: TATTTGCCATTTTTGTAAGCGAAACTCTTTACCTCAATACCAAGCCACAATGCCTGATGGAAAACTGTACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000468677.5
ENST00000610343.5
CDS TCA 72 bp TCCATATTTCTTCAAGTGCAAGTTGTTTTGATCCTCTaGGTGGTTGCAGAACTCTGTCATAGTCAAGTTAAA +
Preference number: 6 (lower is better)
Translates to: SIFLQVQVVLIL*VVAELCHSQVK
Trigger: TTTAACTTGACTATGACAGAGTTCTGCAACCACTCAGAGGATCAAAACAACTTGCACTTGAAGAAATATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468677.5
CDS GCA 72 bp AGATACACAAATACTTACCATTGTGTTACAACTGCCTaGAGTATTCATTACAGTAACATGCTGTACAGGCTT +
Preference number: 6 (lower is better)
Translates to: RYTNTYHCVTTA*SIHYSNMLYRL
Trigger: AAGCCTGTACAGCATGTTACTGTAATGAATACTGCAGGCAGTTGTAACACAATGGTAAGTATTTGTGTATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS GCA 72 bp TTTAACTCATCTAATACCAGAAGATCTTCATCAAGTTaGCTAGTTTTGACCCAGTGTTTCCATGCATTTACG +
Preference number: 6 (lower is better)
Translates to: FNSSNTRRSSSS*LVLTQCFHAFT
Trigger: CGTAAATGCATGGAAACACTGGGTCAAAACTAGGCAACTTGATGAAGATCTTCTGGTATTAGATGAGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS CCA 72 bp AATTGCAAAAGTTGTACAGTTTTCCATCAGGCATTGTaGCTTGGTATTGAGGTAAAGAGTTTCGCTTACAAA +
Preference number: 6 (lower is better)
Translates to: NCKSCTVFHQAL*LGIEVKSFAYK
Trigger: TTTGTAAGCGAAACTCTTTACCTCAATACCAAGCCACAATGCCTGATGGAAAACTGTACAACTTTTGCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000468677.5
ENST00000610343.5
CDS CAA 72 bp ACACATCTCAATCCTAAACGTCTGGCAAAATCCTGTTaGTATAATAATTTGCAGCCTTCACTACAGAAAGGT +
Preference number: 6 (lower is better)
Translates to: THLNPKRLAKSC*YNNLQPSLQKG
Trigger: ACCTTTCTGTAGTGAAGGCTGCAAATTATTATACAAACAGGATTTTGCCAGACGTTTAGGATTGAGATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CAA 90 bp CTTAACGCCAGAGAAATTTACTGTTTCATGAAGAGTCTTCTCCTCTaGACAGTATTCGCAATATGTAACTATGCAATGCAACTTCTTATA +
Preference number: 6 (lower is better)
Translates to: LNAREIYCFMKSLLL*TVFAICNYAMQLLI
Trigger: TATAAGAAGTTGCATTGCATAGTTACATATTGCGAATACTGTCAAGAGGAGAAGACTCTTCATGAAACAGTAAATTTCTCTGGCGTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000610343.5
CDS CAA 90 bp TGGTTGCCAGCTTCGCAGTATTTTATTCAATTCTTGCTCAAATGTTaGGTATCCAGGATCAATAAATATGTTGTCTTTTCGATTACTTCC +
Preference number: 6 (lower is better)
Translates to: WLPASQYFIQFLLKC*VSRINKYVVFSITS
Trigger: GGAAGTAATCGAAAAGACAACATATTTATTGATCCTGGATACCAAACATTTGAGCAAGAATTGAATAAAATACTGCGAAGCTGGCAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS CAA 90 bp TGGAAGTATGCTTGGTTGCCAGCTTCGCAGTATTTTATTCAATTCTaGCTCAAATGTTTGGTATCCAGGATCAATAAATATGTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: WKYAWLPASQYFIQF*LKCLVSRINKYVVF
Trigger: AAAGACAACATATTTATTGATCCTGGATACCAAACATTTGAGCAAGAATTGAATAAAATACTGCGAAGCTGGCAACCAAGCATACTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS TCA 72 bp TGCATATTTTGTCTTGTGACTGTTCATACAAGCAGTTaGACAATATGGCTCCATATATCCATTAGGACCTAT +
Preference number: 6 (lower is better)
Translates to: CIFCLVTVHTSS*TIWLHISIRTY
Trigger: ATAGGTCCTAATGGATATATGGAGCCATATTGTTCAACTGCTTGTATGAACAGTCACAAGACAAAATATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000468677.5
ENST00000610343.5
CDS TCA 72 bp ATTCACGTATCTTTTAGGTTGCTACTGCAAGATATATaGTGGTCCTTGAATACAGTGATTTATAGCCATGCA +
Preference number: 6 (lower is better)
Translates to: IHVSFRLLLQDI*WSLNTVIYSHA
Trigger: TGCATGGCTATAAATCACTGTATTCAAGGACCATCATATATCTTGCAGTAGCAACCTAAAAGATACGTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490152.1
CDS GCA 72 bp AAGTTAATCCTCCTGCCAAAAGTGAATACAGTAATGTaGCAAATAACGATGTTTCACTCAGTGATTGTAATG +
Preference number: 6 (lower is better)
Translates to: KLILLPKVNTVM*QITMFHSVIVM
Trigger: CATTACAATCACTGAGTGAAACATCGTTATTTGGCACATTACTGTATTCACTTTTGGCAGGAGGATTAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382883.7
CDS CAA 72 bp GCTTGGTTGCCAGCTTCGCAGTATTTTATTCAATTCTaGCTCAAATGTTTGGTATCCAGGATCAATAAATAT +
Preference number: 6 (lower is better)
Translates to: AWLPASQYFIQF*LKCLVSRINKY
Trigger: ATATTTATTGATCCTGGATACCAAACATTTGAGCAAGAATTGAATAAAATACTGCGAAGCTGGCAACCAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382870.7
ENST00000382871.3
ENST00000382874.6
ENST00000382883.7
ENST00000494061.6
ENST00000610343.5
CDS TCA 72 bp AAAACAACATCATCATCATCTTCCACTGACGAGTTCTaGAACTTATTAGATCTAGACACTAAAGGATTAGCT +
Preference number: 6 (lower is better)
Translates to: KTTSSSSSTDEF*NLLDLDTKGLA
Trigger: AGCTAATCCTTTAGTGTCTAGATCTAATAAGTTTCAGAACTCGTCAGTGGAAGATGATGATGATGTTGTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382871.3
ENST00000382874.6
ENST00000382881.7
ENST00000610343.5
ENST00000620447.1
CDS GCA 72 bp TTGAATACAGTGATTTATAGCCATGCACTATATATCTaGACCACCACTTACAGAATCTTAAGCAAATTTCTC +
Preference number: 6 (lower is better)
Translates to: LNTVIYSHALYI*TTTYRILSKFL
Trigger: GAGAAATTTGCTTAAGATTCTGTAAGTGGTGGTGCAGATATATAGTGCATGGCTATAAATCACTGTATTCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490152.1