Pregenerated sensors for ZMAT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000166432Ensembl transcript IDs: ENST00000372782.4, ENST00000458570.5, ENST00000488347.5, ENST00000490757.2, ENST00000494068.1, ENST00000540921.5, ENST00000651725.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTGTGCTCGGCGCCGCCGCCATCGCAGCGAGGCGCGCGGACAATTaGACTTGCGTCTCGATTCCGTTAAGCTCCTTTAGCCCCGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TVLGAAAIAARRADN*TCVSIPLSSFSPAF Trigger: GAAGGCGGGGCTAAAGGAGCTTAACGGAATCGAGACGCAAGTGCAATTGTCCGCGCGCCTCGCTGCGATGGCGGCGGCGCCGAGCACAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651725.1 |
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| CDS TCA 90 bp | CCGAGGTTCTGTTCTGCTCTCAGCCCTTCTAGGATTCCTTGTTTCTaGGTTCACCCAGAAACTCAGGCTCCTTTATCGCTTGTACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PRFCSALSPSRIPCF*VHPETQAPLSLVPF Trigger: GAAGGGTACAAGCGATAAAGGAGCCTGAGTTTCTGGGTGAACTCAGAAACAAGGAATCCTAGAAGGGCTGAGAGCAGAACAGAACCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 90 bp | GAAAGCTTTACACACGATTTAACTGTGCAGCCACTGTTGAGCACTTaGCCTAGATCAAGCTTGTCCAACTTGCAGCCCACAGGCCACATG | + |
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Preference number: 5 (lower is better) Translates to: ESFTHDLTVQPLLST*PRSSLSNLQPTGHM Trigger: CATGTGGCCTGTGGGCTGCAAGTTGGACAAGCTTGATCTAGGGCAAGTGCTCAACAGTGGCTGCACAGTTAAATCGTGTGTAAAGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 90 bp | GAAGATATGAAACCTATTTATGGCCCCAAGGTCAGAATTCCTGATTaGATCCTCCTGGGGCCTGCCTCCATTCTGTTTCTTATACTCTCC | + |
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Preference number: 5 (lower is better) Translates to: EDMKPIYGPKVRIPD*ILLGPASILFLILS Trigger: GGAGAGTATAAGAAACAGAATGGAGGCAGGCCCCAGGAGGATTCAATCAGGAATTCTGACCTTGGGGCCATAAATAGGTTTCATATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 90 bp | ACCACACCACACTGCTTCTCTAGCTTAACTTCTTCCCTAAGAATCTaGTATCTGTCTACTTACTGTTGCTACATGGAGGTGCAACAGGCA | + |
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Preference number: 5 (lower is better) Translates to: TTPHCFSSLTSSLRI*YLSTYCCYMEVQQA Trigger: TGCCTGTTGCACCTCCATGTAGCAACAGTAAGTAGACAGATAGCAGATTCTTAGGGAAGAAGTTAAGCTAGAGAAGCAGTGTGGTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CCA 90 bp | GTTAGTGTATTTTATGTGTGGCCCAAGGTAATTCTTCTTCCAACGTaGCCCATGGAAGCCGAAAGATTGGACACCTCTACCCTAGATTAT | + |
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Preference number: 5 (lower is better) Translates to: VSVFYVWPKVILLPT*PMEAERLDTSTLDY Trigger: ATAATCTAGGGTAGAGGTGTCCAATCTTTCGGCTTCCATGGGCCACGTTGGAAGAAGAATTACCTTGGGCCACACATAAAATACACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 90 bp | GTGTCAGTTAAAAATATAGATTCCCAGGCTCTCCCCTGGAGAACATaGTTCAATGTTTCTAGGGCAGGGACAAGAAATTTCTATGATCAC | + |
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Preference number: 5 (lower is better) Translates to: VSVKNIDSQALPWRT*FNVSRAGTRNFYDH Trigger: GTGATCATAGAAATTTCTTGTCCCTGCCCTAGAAACATTGAATCATGTTCTCCAGGGGAGAGCCTGGGAATCTATATTTTTAACTGACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 90 bp | AGATTAACTTTGCCAATACCATATATTTTGAGGGTACCCAAGTTGTaGAAGATAAGCAGGAGTCCTGGTTTCCTCTGGATTAGTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RLTLPIPYILRVPKL*KISRSPGFLWISGS Trigger: AGAACCACTAATCCAGAGGAAACCAGGACTCCTGCTTATCTTGCACAACTTGGGTACCCTCAAAATATATGGTATTGGCAAAGTTAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 90 bp | ATTAAATCAGAATCTCTAGGAGTGGAATTAGGCACCCTTACTTTTTaGAAGCTTTACACACGATTTAACTGTGCAGCCACTGTTGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: IKSESLGVELGTLTF*KLYTRFNCAATVEH Trigger: GTGCTCAACAGTGGCTGCACAGTTAAATCGTGTGTAAAGCTTTCAAAAAGTAAGGGTGCCTAATTCCACTCCTAGAGATTCTGATTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 90 bp | CAATCCTGTAGAGTCACATTATTTTCATTTTATACCAGAGGAATCTaGGGTGCAACTTGGCAAGTGACTGTATCTCCAAATCTATGTTTA | + |
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Preference number: 5 (lower is better) Translates to: QSCRVTLFSFYTRGI*GATWQVTVSPNLCL Trigger: TAAACATAGATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAAATGAAAATAATGTGACTCTACAGGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CCA 90 bp | GTCACATTATTTTCATTTTATACCAGAGGAATCTGCGGTGCAACTTaGCAAGTGACTGTATCTCCAAATCTATGTTTATCCCTCTATACA | + |
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Preference number: 5 (lower is better) Translates to: VTLFSFYTRGICGAT*QVTVSPNLCLSLYT Trigger: TGTATAGAGGGATAAACATAGATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAAATGAAAATAATGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 90 bp | TTCAAAGAAGCTAAATTAATTATTACCAAGTATATTGGCCTTGTCTaGGCAAAGACTATTCATAGAAACAGGAGACTGCTTGCAAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: FKEAKLIITKYIGLV*AKTIHRNRRLLARG Trigger: TCCCCTTGCAAGCAGTCTCCTGTTTCTATGAATAGTCTTTGCTCAGACAAGGCCAATATACTTGGTAATAATTAATTTAGCTTCTTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000490757.2 ENST00000494068.1 |
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| CDS GCA 90 bp | AAGATAAGCAGGAGTCCTGGTTTCCTCTGGATTAGTGGTTCTCAATaGTGGTTACACATTAGAATCATATGGAAAAATTCAAAAATATTG | + |
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Preference number: 5 (lower is better) Translates to: KISRSPGFLWISGSQ*WLHIRIIWKNSKIL Trigger: CAATATTTTTGAATTTTTCCATATGATTCTAATGTGTAACCAGCATTGAGAACCACTAATCCAGAGGAAACCAGGACTCCTGCTTATCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 72 bp | GCCGCCATCGCAGCGAGGCGCGCGGACAATTGCACTTaGGTCTCGATTCCGTTAAGCTCCTTTAGCCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AAIAARRADNCT*VSIPLSSFSPA Trigger: GGCGGGGCTAAAGGAGCTTAACGGAATCGAGACGCAAGTGCAATTGTCCGCGCGCCTCGCTGCGATGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651725.1 |
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| CDS CCA 72 bp | GATGCTGACTCTGAAGAAAATGAGGCTGCACACTACTaGCTATTGCGGGCCCAGGAAAACTCAGCAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: DADSEENEAAHY*LLRAQENSAGY Trigger: ATAACCTGCTGAGTTTTCCTGGGCCCGCAATAGCCAGTAGTGTGCAGCCTCATTTTCTTCAGAGTCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CCA 72 bp | TTTTATGTGTGGCCCAAGGTAATTCTTCTTCCAACGTaGCCCATGGAAGCCGAAAGATTGGACACCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: FYVWPKVILLPT*PMEAERLDTST Trigger: GGTAGAGGTGTCCAATCTTTCGGCTTCCATGGGCCACGTTGGAAGAAGAATTACCTTGGGCCACACATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 72 bp | GACTCTGAAGAAAATGAGGCTGCACACTACTGGCTATaGCGGGCCCAGGAAAACTCAGCAGGTTATGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: DSEENEAAHYWL*RAQENSAGYVK Trigger: TTTGACATAACCTGCTGAGTTTTCCTGGGCCCGCAATAGCCAGTAGTGTGCAGCCTCATTTTCTTCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 90 bp | TGGAGGTGCAACAGGCACCTGAAATTTAGCATGGCCAACCAACCTTaGCCTCTGAATCTCTTAACCAGCCTCTTTTTGTTTGCCCCAACT | + |
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Preference number: 6 (lower is better) Translates to: WRCNRHLKFSMANQP*PLNLLTSLFLFAPT Trigger: AGTTGGGGCAAACAAAAAGAGGCTGGTTAAGAGATTCAGAGGCAAAGGTTGGTTGGCCATGCTAAATTTCAGGTGCCTGTTGCACCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 72 bp | TATGAAACCTATTTATGGCCCCAAGGTCAGAATTCCTaGTTGAATCCTCCTGGGGCCTGCCTCCATTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: YETYLWPQGQNS*LNPPGACLHSV Trigger: AACAGAATGGAGGCAGGCCCCAGGAGGATTCAATCAGGAATTCTGACCTTGGGGCCATAAATAGGTTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 72 bp | GTGTTAGCCTCTCAGAGCCCACACCTCTTAATTGAATaGCCAGAATTCTTTACACCACACCACACTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VLASQSPHLLIE*PEFFTPHHTAS Trigger: AGAAGCAGTGTGGTGTGGTGTAAAGAATTCTGGGCATTCAATTAAGAGGTGTGGGCTCTGAGAGGCTAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 72 bp | GGGAAAAGCCAATTGAGAGCTGCACATAATCAAAACTaGAGCTGTCAGGAAGAATTGCTAATGAACGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GKSQLRAAHNQN*SCQEELLMNAG Trigger: CCCAGCGTTCATTAGCAATTCTTCCTGACAGCTGCAGTTTTGATTATGTGCAGCTCTCAATTGGCTTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 72 bp | GAAAGCTTTACACACGATTTAACTGTGCAGCCACTGTaGAGCACTTGCCCTAGATCAAGCTTGTCCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: ESFTHDLTVQPL*STCPRSSLSNL Trigger: CAAGTTGGACAAGCTTGATCTAGGGCAAGTGCTCAACAGTGGCTGCACAGTTAAATCGTGTGTAAAGCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 72 bp | TTTGCCTCTGAATCTCTTAACCAGCCTCTTTTTGTTTaGCCCAACTCTGTTTCCACCCAACCAAAACCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FASESLNQPLFV*PNSVSTQPKPE Trigger: TTCAGGTTTTGGTTGGGTGGAAACAGAGTTGGGGCAAACAAAAAGAGGCTGGTTAAGAGATTCAGAGGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 90 bp | GTGCTGGAACTTAGGCTCAGATTAACTTTGCCAATACCATATATTTaGAGGGTACCCAAGTTGTGCAAGATAAGCAGGAGTCCTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VLELRLRLTLPIPYI*RVPKLCKISRSPGF Trigger: GAAACCAGGACTCCTGCTTATCTTGCACAACTTGGGTACCCTCAAAATATATGGTATTGGCAAAGTTAATCTGAGCCTAAGTTCCAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 72 bp | GAATCATATGTCCTCTTTGAATGGGTTGGTAGCCACTaGGGTAACTGGCTTTCCACTGGTGAAATATGGTAT | + |
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Preference number: 6 (lower is better) Translates to: ESYVLFEWVGSH*GNWLSTGEIWY Trigger: ATACCATATTTCACCAGTGGAAAGCCAGTTACCTCAGTGGCTACCAACCCATTCAAAGAGGACATATGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000372782.4 ENST00000458570.5 ENST00000488347.5 ENST00000494068.1 ENST00000540921.5 ENST00000651725.1 |
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| CDS GCA 72 bp | TTGTCTGAGCAAAGACTATTCATAGAAACAGGAGACTaGTTGCAAGGGGAAAGAAAGATGCTGACTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSEQRLFIETGD*LQGERKMLTLK Trigger: CTTCAGAGTCAGCATCTTTCTTTCCCCTTGCAAGCAGTCTCCTGTTTCTATGAATAGTCTTTGCTCAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000490757.2 ENST00000494068.1 |
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| CDS GCA 72 bp | CACTGCTTCTCTAGCTTAACTTCTTCCCTAAGAATCTaGTATCTGTCTACTTACTGTTGCTACATGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HCFSSLTSSLRI*YLSTYCCYMEV Trigger: CACCTCCATGTAGCAACAGTAAGTAGACAGATAGCAGATTCTTAGGGAAGAAGTTAAGCTAGAGAAGCAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 72 bp | AACAGGCACCTGAAATTTAGCATGGCCAACCAACCTTaGCCTCTGAATCTCTTAACCAGCCTCTTTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: NRHLKFSMANQP*PLNLLTSLFLF Trigger: AAACAAAAAGAGGCTGGTTAAGAGATTCAGAGGCAAAGGTTGGTTGGCCATGCTAAATTTCAGGTGCCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 90 bp | CTCAGATTAACTTTGCCAATACCATATATTTTGAGGGTACCCAAGTaGTGCAAGATAAGCAGGAGTCCTGGTTTCCTCTGGATTAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRLTLPIPYILRVPK*CKISRSPGFLWISG Trigger: ACCACTAATCCAGAGGAAACCAGGACTCCTGCTTATCTTGCACAACTTGGGTACCCTCAAAATATATGGTATTGGCAAAGTTAATCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CCA 72 bp | AGAGTTATTTTCTTGCTGATTAAGGCTCAAGGGTACTaGTTTTTCTGGGAAACAGTCTCTGGTGAGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: RVIFLLIKAQGY*FFWETVSGELT Trigger: TGTCAACTCACCAGAGACTGTTTCCCAGAAAAACCAGTACCCTTGAGCCTTAATCAGCAAGAAAATAACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000372782.4 ENST00000458570.5 ENST00000488347.5 ENST00000494068.1 ENST00000540921.5 ENST00000651725.1 |
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| CDS CCA 72 bp | AAATGTGTAAGTCCCAGAGATGGTAATTTAATTGATTaGAGGGTTGGCCTGAGCAATGGGAGTTCTAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: KCVSPRDGNLID*RVGLSNGSSKS Trigger: GCTTTTAGAACTCCCATTGCTCAGGCCAACCCTCCAATCAATTAAATTACCATCTCTGGGACTTACACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 90 bp | TCGTACCATCTTTTACAGGTGCTGGAACTTAGGCTCAGATTAACTTaGCCAATACCATATATTTTGAGGGTACCCAAGTTGTGCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: SYHLLQVLELRLRLT*PIPYILRVPKLCKI Trigger: TATCTTGCACAACTTGGGTACCCTCAAAATATATGGTATTGGCAAAGTTAATCTGAGCCTAAGTTCCAGCACCTGTAAAAGATGGTACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 72 bp | TTTATACCAGAGGAATCTGCGGTGCAACTTGGCAAGTaGCTGTATCTCCAAATCTATGTTTATCCCTCTATA | + |
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Preference number: 6 (lower is better) Translates to: FIPEESAVQLGK*LYLQIYVYPSI Trigger: TATAGAGGGATAAACATAGATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CCA 72 bp | TCATCAGTTATTGTTAGTGTTAGTGTATTTTATGTGTaGCCCAAGGTAATTCTTCTTCCAACGTGGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: SSVIVSVSVFYV*PKVILLPTWPM Trigger: CATGGGCCACGTTGGAAGAAGAATTACCTTGGGCCACACATAAAATACACTAACACTAACAATAACTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 72 bp | CTTAGGCTCAGATTAACTTTGCCAATACCATATATTTaGAGGGTACCCAAGTTGTGCAAGATAAGCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LRLRLTLPIPYI*RVPKLCKISRS Trigger: ACTCCTGCTTATCTTGCACAACTTGGGTACCCTCAAAATATATGGTATTGGCAAAGTTAATCTGAGCCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 72 bp | CTTTTACAGGTGCTGGAACTTAGGCTCAGATTAACTTaGCCAATACCATATATTTTGAGGGTACCCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLQVLELRLRLT*PIPYILRVPKL Trigger: CAACTTGGGTACCCTCAAAATATATGGTATTGGCAAAGTTAATCTGAGCCTAAGTTCCAGCACCTGTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 72 bp | CACATTATTTTCATTTTATACCAGAGGAATCTGCGGTaGAACTTGGCAAGTGACTGTATCTCCAAATCTATG | + |
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Preference number: 6 (lower is better) Translates to: HIIFILYQRNLR*NLASDCISKSM Trigger: CATAGATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAAATGAAAATAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 72 bp | AGAGTCACATTATTTTCATTTTATACCAGAGGAATCTaGGGTGCAACTTGGCAAGTGACTGTATCTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: RVTLFSFYTRGI*GATWQVTVSPN Trigger: ATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAAATGAAAATAATGTGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS GCA 72 bp | AGGAGTCCTGGTTTCCTCTGGATTAGTGGTTCTCAATaGTGGTTACACATTAGAATCATATGGAAAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: RSPGFLWISGSQ*WLHIRIIWKNS Trigger: TGAATTTTTCCATATGATTCTAATGTGTAACCAGCATTGAGAACCACTAATCCAGAGGAAACCAGGACTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CCA 72 bp | TTTTCATTTTATACCAGAGGAATCTGCGGTGCAACTTaGCAAGTGACTGTATCTCCAAATCTATGTTTATCC | + |
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Preference number: 6 (lower is better) Translates to: FSFYTRGICGAT*QVTVSPNLCLS Trigger: GGATAAACATAGATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAAATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 90 bp | AGTCACATTATTTTCATTTTATACCAGAGGAATCTGCGGTGCAACTaGGCAAGTGACTGTATCTCCAAATCTATGTTTATCCCTCTATAC | + |
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Preference number: 6 (lower is better) Translates to: SHIIFILYQRNLRCN*ASDCISKSMFIPLY Trigger: GTATAGAGGGATAAACATAGATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAAATGAAAATAATGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CAA 72 bp | ATTTTCATTTTATACCAGAGGAATCTGCGGTGCAACTaGGCAAGTGACTGTATCTCCAAATCTATGTTTATC | + |
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Preference number: 6 (lower is better) Translates to: IFILYQRNLRCN*ASDCISKSMFI Trigger: GATAAACATAGATTTGGAGATACAGTCACTTGCCAAGTTGCACCGCAGATTCCTCTGGTATAAAATGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS CCA 72 bp | AGTCCTGGTTTCCTCTGGATTAGTGGTTCTCAATGCTaGTTACACATTAGAATCATATGGAAAAATTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SPGFLWISGSQC*LHIRIIWKNSK Trigger: TTTTGAATTTTTCCATATGATTCTAATGTGTAACCAGCATTGAGAACCACTAATCCAGAGGAAACCAGGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494068.1 |
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| CDS TCA 72 bp | GCTAAATTAATTATTACCAAGTATATTGGCCTTGTCTaGGCAAAGACTATTCATAGAAACAGGAGACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AKLIITKYIGLV*AKTIHRNRRLL Trigger: AAGCAGTCTCCTGTTTCTATGAATAGTCTTTGCTCAGACAAGGCCAATATACTTGGTAATAATTAATTTAGC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000490757.2 ENST00000494068.1 |
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